Cla97C05G091280 (gene) Watermelon (97103) v2

Overview
NameCla97C05G091280
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionUnknown protein
LocationCla97Chr05 : 9309979 .. 9310711 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACAAGAAGATGCTCCAACCTCTGAAAGGTATTTGATATCATTTTTTTCTTTTACTGAAGAAAGAGGAGTTGTTTTTTCGGTTTTTAGTTATGAATTAGGAAATGGGTTTTGATGGGTACATTGATTTGGGTTATTATTGTTTCTTCTTTGTAGATTGTGTTTATTGCTATTACTGTGCATTGCTCGCAACCCTTTTGTTTTCTGTTTCAAAAGGTAAGAAGTAAAAGACATAATCATCTTGTGAGAACTGAAAGTAACTTGCAGATGCAGCCTTTTGGAATAGGTCTCATTATGCCTTGAAAAGGAACAATATATGGTGTAGTTTTATGCTGGCAGACCAATGTGGAAAAGAATAGTATTATAGAGGACTTTTTTTGTGCATAAAAGTTGCCTTTTCTCTCTTCAGTTTACATTTAGTTGTCACTAATAGCCAGAAAACCTTGTGTTTGCTTTATCAACGAGGAGATGGGGTTGGGGGAGATGGAAAAGGGGAAAAACAAGTGGGGTTGATTGCAGTCTGTCTTTTCCCTGAAAACCAGGGACAATTCTCTTTTATTCTTTTTCTTTTTTTCTCTTTTTTATGACTTGTATTTTGTTTTAGTTTGGCTTCTACATGTTCTTCAGACTCAGGCACATGTAAAAGCAACTATACTTTTGGCATTTCATGTTTTGGTTGATAACCTTATAGCCTTGATCCATCTTGCATATTACAATTTTATGATTTTATGA

mRNA sequence

ATGCACAAGAAGATGCTCCAACCTCTGAAAGATTGTGTTTATTGCTATTACTGTGCATTGCTCGCAACCCTTTTGTTTTCTGTTTCAAAAGGTAAGAATTTACATTTAGTTGTCACTAATAGCCAGAAAACCTTGTGTTTGCTTTATCAACGAGGAGATGGGGTTGGGGGAGATGGAAAAGGGGAAAAACAAGTGGGGTTGATTGCAACTCAGGCACATGTAAAAGCAACTATACTTTTGGCATTTCATGTTTTGGTTGATAACCTTATAGCCTTGATCCATCTTGCATATTACAATTTTATGATTTTATGA

Coding sequence (CDS)

ATGCACAAGAAGATGCTCCAACCTCTGAAAGATTGTGTTTATTGCTATTACTGTGCATTGCTCGCAACCCTTTTGTTTTCTGTTTCAAAAGGTAAGAATTTACATTTAGTTGTCACTAATAGCCAGAAAACCTTGTGTTTGCTTTATCAACGAGGAGATGGGGTTGGGGGAGATGGAAAAGGGGAAAAACAAGTGGGGTTGATTGCAACTCAGGCACATGTAAAAGCAACTATACTTTTGGCATTTCATGTTTTGGTTGATAACCTTATAGCCTTGATCCATCTTGCATATTACAATTTTATGATTTTATGA

Protein sequence

MHKKMLQPLKDCVYCYYCALLATLLFSVSKGKNLHLVVTNSQKTLCLLYQRGDGVGGDGKGEKQVGLIATQAHVKATILLAFHVLVDNLIALIHLAYYNFMIL
Homology
[Close]
BLAST of Cla97C05G091280 vs. NCBI nr
Match: KGN57663.1 (hypothetical protein Csa_3G239270 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 7.7e-10
Identity = 49/91 (53.85%), Postives = 53/91 (58.24%), Query Frame = 0 

Query: 13  VYCYYCALLATLLFSVSKGKNLHLVVTNSQKTLCLLYQRGDGVGGDGKGEKQVGLIATQA 72
           VYC +CALLATLLFS SK K                   GDGV    KGE+Q     TQA
Sbjct: 125 VYCCHCALLATLLFSASKEK-----------------IGGDGVXXXXKGERQ-----TQA 184

Query: 73  HVKATILLAFHVLVDNLIALIHLAYYNFMIL 104
           HVKA ++L FH LVD LIA IHLAYYN  IL
Sbjct: 185 HVKAAMVLEFHGLVDKLIAFIHLAYYNSTIL 193

[Close]
BLAST of Cla97C05G091280 vs. TrEMBL
Match: tr|A0A0A0L7A5|A0A0A0L7A5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239270 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.1e-10
Identity = 49/91 (53.85%), Postives = 53/91 (58.24%), Query Frame = 0 

Query: 13  VYCYYCALLATLLFSVSKGKNLHLVVTNSQKTLCLLYQRGDGVGGDGKGEKQVGLIATQA 72
           VYC +CALLATLLFS SK K                   GDGV    KGE+Q     TQA
Sbjct: 125 VYCCHCALLATLLFSASKEK-----------------IGGDGVXXXXKGERQ-----TQA 184

Query: 73  HVKATILLAFHVLVDNLIALIHLAYYNFMIL 104
           HVKA ++L FH LVD LIA IHLAYYN  IL
Sbjct: 185 HVKAAMVLEFHGLVDKLIAFIHLAYYNSTIL 193

The following BLAST results are available for this feature:
BLAST of Cla97C05G091280 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57663.17.7e-1053.85hypothetical protein Csa_3G239270 [Cucumis sativus][more]
BLAST of Cla97C05G091280 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L7A5|A0A0A0L7A5_CUCSA5.1e-1053.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239270 PE=4 SV=1[more]
BLAST of Cla97C05G091280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C05G091280 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C05G091280.1Cla97C05G091280.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C05G091280CSPI03G19760Wild cucumber (PI 183967)cpiwmbB221
Cla97C05G091280Lsi05G001070Bottle gourd (USVL1VR-Ls)lsiwmbB329
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C05G091280Watermelon (97103) v2wmbwmbB022
Cla97C05G091280Watermelon (97103) v2wmbwmbB130
Cla97C05G091280Silver-seed gourdcarwmbB0565
Cla97C05G091280Silver-seed gourdcarwmbB0566
Cla97C05G091280Silver-seed gourdcarwmbB0533
Cla97C05G091280Silver-seed gourdcarwmbB1042
Cla97C05G091280Cucumber (Gy14) v2cgybwmbB206
Cla97C05G091280Cucumber (Gy14) v2cgybwmbB214
Cla97C05G091280Cucumber (Gy14) v2cgybwmbB366
Cla97C05G091280Cucumber (Gy14) v1cgywmbB003
Cla97C05G091280Cucumber (Gy14) v1cgywmbB380
Cla97C05G091280Cucumber (Gy14) v1cgywmbB450
Cla97C05G091280Cucurbita maxima (Rimu)cmawmbB307
Cla97C05G091280Cucurbita maxima (Rimu)cmawmbB346
Cla97C05G091280Cucurbita maxima (Rimu)cmawmbB424
Cla97C05G091280Cucurbita maxima (Rimu)cmawmbB428
Cla97C05G091280Cucurbita maxima (Rimu)cmawmbB649
Cla97C05G091280Cucurbita moschata (Rifu)cmowmbB242
Cla97C05G091280Cucurbita moschata (Rifu)cmowmbB289
Cla97C05G091280Cucurbita moschata (Rifu)cmowmbB331
Cla97C05G091280Cucurbita moschata (Rifu)cmowmbB404
Cla97C05G091280Cucurbita moschata (Rifu)cmowmbB409
Cla97C05G091280Cucurbita moschata (Rifu)cmowmbB621
Cla97C05G091280Wild cucumber (PI 183967)cpiwmbB231
Cla97C05G091280Wild cucumber (PI 183967)cpiwmbB403
Cla97C05G091280Cucumber (Chinese Long) v3cucwmbB217
Cla97C05G091280Cucumber (Chinese Long) v3cucwmbB225
Cla97C05G091280Cucumber (Chinese Long) v3cucwmbB399
Cla97C05G091280Cucumber (Chinese Long) v2cuwmbB215
Cla97C05G091280Cucumber (Chinese Long) v2cuwmbB224
Cla97C05G091280Cucumber (Chinese Long) v2cuwmbB384
Cla97C05G091280Bottle gourd (USVL1VR-Ls)lsiwmbB019
Cla97C05G091280Bottle gourd (USVL1VR-Ls)lsiwmbB332
Cla97C05G091280Melon (DHL92) v3.6.1medwmbB020
Cla97C05G091280Melon (DHL92) v3.6.1medwmbB424
Cla97C05G091280Melon (DHL92) v3.6.1medwmbB432
Cla97C05G091280Melon (DHL92) v3.5.1mewmbB023
Cla97C05G091280Melon (DHL92) v3.5.1mewmbB434
Cla97C05G091280Melon (DHL92) v3.5.1mewmbB439
Cla97C05G091280Watermelon (Charleston Gray)wcgwmbB108
Cla97C05G091280Watermelon (Charleston Gray)wcgwmbB229
Cla97C05G091280Watermelon (Charleston Gray)wcgwmbB232
Cla97C05G091280Watermelon (97103) v1wmwmbB206
Cla97C05G091280Watermelon (97103) v1wmwmbB212
Cla97C05G091280Watermelon (97103) v1wmwmbB268
Cla97C05G091280Wax gourdwgowmbB073
Cla97C05G091280Wax gourdwgowmbB179
Cla97C05G091280Wax gourdwgowmbB190