Cla97C05G080640 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G080640
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	vegetative cell wall protein gp1
Location	Cla97Chr05 : 649234 .. 651589 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACCGCTTCTCTTCTTTGCCCCGTCCGGTAGTGCCTCACGGCCAGAAATTCAACCGTTGACGGCGGCGACGGAGCCGGAAGTTTTTCCCTCTGCTCCGACAACCACTAATATTTATAAAACTTCTCCTATAAGAGAAAGATCCCCTCGAGTTCCATCTCCAATTAGAAAACTTCCCTCGCCGCCATCTTCGCCAAAATATGGGGGTGCCACCACCATTTCGCCTCGCAAACCACTATCTCCAACTCCGACGTACAACCGTTACGACGGTGAATGGCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAGCCCACCCATATCTCTCCGCCATTGTCTCCGCCCAAGCCTAAACACTCTACCGTTGCCACCACTGCACCGCTCTCTCCTCCGGCTCGCACGTTCACGGAGGTAATACAAACAGAATTACCTGATATGATCTTTCGAGGCCGGGTCGCACGAGAACCTGAAGTTACACCCGCTATCACTCTAATGGTTAGTTAAATTACTCCAAAATTAATTTATAGCCCCCTCAATATTCACTTTATTTACGGTAAAACTATTTGAAAATTTATATTGTCTATGTATTATAATCATCATCTTTTAAAATCCAAATTATAATAGTCTGCACATAATCACAAACTATTATACCAATAATAACCAATCCAACATTTCAATAGATCCTTATAATTTTTCTTTTAAAATCATCTAGCTAGTTGGTCTCGTTGTATTTGAGATAGTTGTACTCTCTAATATACCATGGTATTTTTGTTACTTAGCTATGGTAGAACTTTGGTTGCATTTCAATGATAGTAATAAATAAATAGACATCTTGTAAGTTTTGTTTAAAAAAAATATAATTAAATTCAACAATTACACTATAATGATAATTCTAAAACTTAATTAACATGTAAGATAGGTTAGATGATACACTATTAAATTTGCCTTCACCCATTAAGCTTAAGCTTTTTGGTCAATTAGTGATTAAACAAGGTATCGTAACAAGTGGTTTAGGAGGTTCTATGTTCAAACCTCTTTTCACCCCTTAAGCTTAAGATTTGGGTCAATTGGTGATTTAAGATAATATAAGCTACTAGATTGCGGGAATAAGGAACTATATTAATGTTTGATGCTTTTTTATTAAACACTAGAGATTGATTGAATAATGATTTTTTTTTTCTTTTTTTGTCAAATGTGTAATGGGTAACTTCCATGTGACTTTTTAGAATATCAAAAGGTTTTATAGGTATGTTTTGATAGTGATTTTAAAATTGTTAAAATCACTCATTTTTTTATGTTTAAAATTATTTGAAACACATATTTAATTACTCAAAATTAATTTAATATTTAATTTTGTACTATTAAATGTAATTTTCATTTCATCAAAGTTGAGTTTTAATCGTTAAAAACATGTTTTATAGTAATTTTAAAAATAACAAAAATAATTTTAATTATTTTAGGAGAACATCCAAACAAATCCTAAGAATATATTAGAGATCAATAATATTATATTATATGTTTAGGTGATTAACAACAAATTTTTAGACTAGTCTTCTTGTAACACCAACAAAGAGATGTGTTCATTCAAGTAAAAGCTCCAATGGAGCTAGCAAAGTGTCAAAGCACTCCACAAATATTATCTCTTCAATAGTCAAATCAACACTAGATTATAAATCCAATTAAAAAAGATTATTATTATTATTATTATTTTATATAAATTAGAAATATTTAGATGTATCTAGACAATACTTATATTTATGCACATGACAAATTATACTTACTTATTATATATATATATTATGCATGTGATGAAAGTGTGAGATGGATAAAAAGATGAATGCATTTTAGTATTATTCTTATATAAATATATATTTGAACTATATATCTAATTTTTAAAATGATAATTGATGAATAGCTTAAACAGACGGATGAACCCCTTGACAAGACGACAGAGAAGTCAACAAAAACTGACCACTGGAAATCGGAGTACACCTCCGACAAACCCCATCAGAAAAAGAATCAGTACCAACATCAGCATCAACAGCAGCAGCAACAGCAAAGCGATGTTATAAACATAAAAGGCGAGAACATAGGGGCAGTGATGCACATCACTCAATCATCTGATGGCTCGGAAATCCTGAAGAAAAAGCCAATTAGCAAGGAAAACGAAGAGAAAGCAAACAAATCAACTTCAAATCTTCCATCAAAATCGTTCATGAACACCAATTTTCAAGGCGTCAACAATTCCATTCTCTACAATTCGTCTTTAAGCCACCGTGACCCAGGCCTCCACCTTGCCTACTCCAAGAAGCCCAACCATGGCGATTCTCTTCATGCTTCAACCAGGCACTAA

mRNA sequence

ATGGAACCGCTTCTCTTCTTTGCCCCGTCCGGTAGTGCCTCACGGCCAGAAATTCAACCGTTGACGGCGGCGACGGAGCCGGAAGTTTTTCCCTCTGCTCCGACAACCACTAATATTTATAAAACTTCTCCTATAAGAGAAAGATCCCCTCGAGTTCCATCTCCAATTAGAAAACTTCCCTCGCCGCCATCTTCGCCAAAATATGGGGGTGCCACCACCATTTCGCCTCGCAAACCACTATCTCCAACTCCGACGTACAACCGTTACGACGGTGAATGGCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAGCCCACCCATATCTCTCCGCCATTGTCTCCGCCCAAGCCTAAACACTCTACCGTTGCCACCACTGCACCGCTCTCTCCTCCGGCTCGCACGTTCACGGAGGTAATACAAACAGAATTACCTGATATGATCTTTCGAGGCCGGGTCGCACGAGAACCTGAAGTTACACCCGCTATCACTCTAATGCTTAAACAGACGGATGAACCCCTTGACAAGACGACAGAGAAGTCAACAAAAACTGACCACTGGAAATCGGAGTACACCTCCGACAAACCCCATCAGAAAAAGAATCAGTACCAACATCAGCATCAACAGCAGCAGCAACAGCAAAGCGATGTTATAAACATAAAAGGCGAGAACATAGGGGCAGTGATGCACATCACTCAATCATCTGATGGCTCGGAAATCCTGAAGAAAAAGCCAATTAGCAAGGAAAACGAAGAGAAAGCAAACAAATCAACTTCAAATCTTCCATCAAAATCGTTCATGAACACCAATTTTCAAGGCGTCAACAATTCCATTCTCTACAATTCGTCTTTAAGCCACCGTGACCCAGGCCTCCACCTTGCCTACTCCAAGAAGCCCAACCATGGCGATTCTCTTCATGCTTCAACCAGGCACTAA

Coding sequence (CDS)

ATGGAACCGCTTCTCTTCTTTGCCCCGTCCGGTAGTGCCTCACGGCCAGAAATTCAACCGTTGACGGCGGCGACGGAGCCGGAAGTTTTTCCCTCTGCTCCGACAACCACTAATATTTATAAAACTTCTCCTATAAGAGAAAGATCCCCTCGAGTTCCATCTCCAATTAGAAAACTTCCCTCGCCGCCATCTTCGCCAAAATATGGGGGTGCCACCACCATTTCGCCTCGCAAACCACTATCTCCAACTCCGACGTACAACCGTTACGACGGTGAATGGCGGACTAGTGCCACAACATCTCCCAAAACCTTCAAGCCCACCCATATCTCTCCGCCATTGTCTCCGCCCAAGCCTAAACACTCTACCGTTGCCACCACTGCACCGCTCTCTCCTCCGGCTCGCACGTTCACGGAGGTAATACAAACAGAATTACCTGATATGATCTTTCGAGGCCGGGTCGCACGAGAACCTGAAGTTACACCCGCTATCACTCTAATGCTTAAACAGACGGATGAACCCCTTGACAAGACGACAGAGAAGTCAACAAAAACTGACCACTGGAAATCGGAGTACACCTCCGACAAACCCCATCAGAAAAAGAATCAGTACCAACATCAGCATCAACAGCAGCAGCAACAGCAAAGCGATGTTATAAACATAAAAGGCGAGAACATAGGGGCAGTGATGCACATCACTCAATCATCTGATGGCTCGGAAATCCTGAAGAAAAAGCCAATTAGCAAGGAAAACGAAGAGAAAGCAAACAAATCAACTTCAAATCTTCCATCAAAATCGTTCATGAACACCAATTTTCAAGGCGTCAACAATTCCATTCTCTACAATTCGTCTTTAAGCCACCGTGACCCAGGCCTCCACCTTGCCTACTCCAAGAAGCCCAACCATGGCGATTCTCTTCATGCTTCAACCAGGCACTAA

Protein sequence

MEPLLFFAPSGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLDKTTEKSTKTDHWKSEYTSDKPHQKKNQYQHQHQQQQQQQSDVINIKGENIGAVMHITQSSDGSEILKKKPISKENEEKANKSTSNLPSKSFMNTNFQGVNNSILYNSSLSHRDPGLHLAYSKKPNHGDSLHASTRH

Homology

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BLAST of Cla97C05G080640 vs. NCBI nr
Match: XP_004133796.1 (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus] >KGN56394.1 hypothetical protein Csa_3G119290 [Cucumis sativus])

HSP 1 Score: 246.9 bits (629), Expect = 9.0e-62
Identity = 174/315 (55.24%), Postives = 202/315 (64.13%), Query Frame = 0


Query: 11  GSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYGG 70
           G+A+RPE QP TAATEPEVFPSA  TTN ++TSPI++R+PR+ SP++K  SPPSSPKY G
Sbjct: 21  GTATRPEPQPFTAATEPEVFPSAVPTTNTFQTSPIKQRTPRLSSPVKKFSSPPSSPKYSG 80

Query: 71  ATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVAT-TAPL 130
           A T+SPR PL     +NRY+GE RTSATTSPKTFKPTHISPP SP KP+HSTV T  APL
Sbjct: 81  AGTVSPRXPLXXXXVHNRYEGERRTSATTSPKTFKPTHISPPPSPSKPRHSTVPTAVAPL 140

Query: 131 SPPARTFTEV-------IQTELPDMIFRGRVAREPEVT--PAITLMLKQTDEPLXXXXXX 190
           SP A   ++V       ++   P  I + ++  +   T  P  T   +Q DE        
Sbjct: 141 SPLALPRSQVRREPEHSLRPRSPPEIEQKKILYQTTTTEKPTKTDHYRQNDE-------- 200

Query: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVINIKGENIGAVMHITQSSDGSEI 250
                                               VINIKGEN+GAVMHITQSSDGSE+
Sbjct: 201 ------------------YGASKPQQKQQHQQLQSDVINIKGENVGAVMHITQSSDGSEV 260

Query: 251 LKKKPI---SKENEEKAXXXXXXXXXXXXXXTNFQGVNNSILYNSSLSHRDPGLHLAY-S 310
           +KKKP    SKENEE  XXXXXXXXXXXXXX     VNNSILYNSSLSHRDPGLHLA+ S
Sbjct: 261 IKKKPTVGQSKENEEXXXXXXXXXXXXXXXXXXXXXVNNSILYNSSLSHRDPGLHLAFGS 308

Query: 311 KKPNHGDSLHASTRH 312
           KK  HGDS+H S RH
Sbjct: 321 KKSKHGDSIHDS-RH 308

[Close]

BLAST of Cla97C05G080640 vs. NCBI nr
Match: XP_008437849.1 (PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 1.0e-57
Identity = 175/307 (57.00%), Postives = 195/307 (63.52%), Query Frame = 0


Query: 12  SASRPEIQP-LTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYGG 71
           +A+R E QP  TAATEPEVFPSA  TTN  +TSP+++R+PR+ SP++K PSPPSSPKY G
Sbjct: 22  TAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRTPRLSSPVKKFPSPPSSPKYSG 81

Query: 72  AT-TISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVAT-TAP 131
           AT TISPRKPLSP  TYNR+DGE RTSATTSPKTFKPT+ISPP S     HST AT  AP
Sbjct: 82  ATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPSXXXXXHSTAATVVAP 141

Query: 132 LSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLXXXXXXXXXXXXXX 191
           LSP A   +EV +   P+   R R   E E    I      T++P               
Sbjct: 142 LSPLALPRSEVRRE--PERSIRPRSPPEIE-QKKILYQTTTTEKP--------------- 201

Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVINIKGENIGAVMHITQSSDGSEILKKKPI-- 251
                                       VINIKG+N+GAVMHITQSSDGSEILKKKP   
Sbjct: 202 TKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKKPSVG 261

Query: 252 -SKENEEKAXXXXXXXXXXXXXXTNFQGVNNSILYNSSLSHRDPGLHLAY-SKKPNHGDS 311
            SKENE   XXXXXXXXXXXXXX       NSILYNSSLSHRDPGLHLAY SK P HGDS
Sbjct: 262 QSKENEXXXXXXXXXXXXXXXXXXXXXXXXNSILYNSSLSHRDPGLHLAYSSKNPKHGDS 309

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BLAST of Cla97C05G080640 vs. NCBI nr
Match: XP_022147442.1 (proline-rich receptor-like protein kinase PERK2 [Momordica charantia])

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-49
Identity = 125/276 (45.29%), Postives = 159/276 (57.61%), Query Frame = 0


Query: 28  EVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYGGATTISPRKPLSPTPTYN 87
           E+ P++P T  + +TSPIRERS R+PSP +K  SPPSSPKY  A   SP KPLSPTP+YN
Sbjct: 42  EISPNSPVTAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSYN 101

Query: 88  RYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVATTAPLSPPARTFTEVIQTELPDM 147
           RYDGE R+SATTSPK  KP++ SPPLSP K K+ T AT APLSP     +E      P +
Sbjct: 102 RYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAPLSPLTLPRSEAKHEPGPTI 161

Query: 148 IFRGRVAREPEVTPAITLMLKQTDEPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 207
                 +R P      ++   + ++P                                  
Sbjct: 162 -----RSRSPPEVEQKSIHYPKVEKP------------------TKPDHRPSEYNSGKPQ 221

Query: 208 XXXXXXXXXVINIKGENIGAVMHITQSSDGSEILKKKPISKE-NEEKAXXXXXXXXXXXX 267
                    VI IKGEN+GA+MHITQSSDG+E++KKKP ++  N+++             
Sbjct: 222 YKQQQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSF 281

Query: 268 XXTNFQGVNNSILYNSSLSHRDPGLHLAYSKKPNHG 303
             +NFQGVNNS+LYNSS SHRDPGLHL++SKKP HG
Sbjct: 282 MNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKPAHG 294

[Close]

BLAST of Cla97C05G080640 vs. NCBI nr
Match: XP_022974813.1 (DNA-directed RNA polymerase II subunit 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 164.9 bits (416), Expect = 4.5e-37
Identity = 127/304 (41.78%), Postives = 148/304 (48.68%), Query Frame = 0


Query: 12  SASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPR-VPSPIRKLPSPPSSPKYGG 71
           +A R ++ P  A +EPEVF SAP T N+ +TSPI+ERSPR                    
Sbjct: 22  TAPRFDVPPPAATSEPEVFSSAPPTANVLQTSPIKERSPRXXXXXXXXXXXXXXXXXXXX 81

Query: 72  ATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVATTAPLS 131
                            RYDGE R+SA  SPKTFK T+ SPP SP K K+ST    APLS
Sbjct: 82  XXXXXXXXXXXXXXXXXRYDGERRSSAQASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLS 141

Query: 132 PPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLXXXXXXXXXXXXXXXX 191
           P A    E  +   P+ + R R    PEV     L  K T E                  
Sbjct: 142 PLALPSLE--KRHEPEPMVRPR--SPPEVQQKSVLYQKTTSE----------------KP 201

Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXVINIKGENIGAVMHITQSSDGSEILKKKP---IS 251
                                     VINIKGEN+GAVMHITQSSD +E  KKKP    S
Sbjct: 202 AKTDHRASEYSSGKPQQKQTHQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYS 261

Query: 252 KENEEKAXXXXXXXXXXXXXXTNFQGVNNSILYNSSLSHRDPGLHLAYSKKPNHGDSLHA 311
            ENE+ +              +NFQGVNNSILYNSSLSHRDPGLHLA++KKP H DS+H 
Sbjct: 262 SENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVHD 304

[Close]

BLAST of Cla97C05G080640 vs. NCBI nr
Match: XP_022974814.1 (DNA-directed RNA polymerase II subunit 1-like isoform X2 [Cucurbita maxima] >XP_022974815.1 DNA-directed RNA polymerase II subunit 1-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 164.9 bits (416), Expect = 4.5e-37
Identity = 127/304 (41.78%), Postives = 148/304 (48.68%), Query Frame = 0


Query: 12  SASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPR-VPSPIRKLPSPPSSPKYGG 71
           +A R ++ P  A +EPEVF SAP T N+ +TSPI+ERSPR                    
Sbjct: 22  TAPRFDVPPPAATSEPEVFSSAPPTANVLQTSPIKERSPRXXXXXXXXXXXXXXXXXXXX 81

Query: 72  ATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVATTAPLS 131
                            RYDGE R+SA  SPKTFK T+ SPP SP K K+ST    APLS
Sbjct: 82  XXXXXXXXXXXXXXXXXRYDGERRSSAQASPKTFKTTYTSPPRSPAKHKYSTSTVQAPLS 141

Query: 132 PPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLXXXXXXXXXXXXXXXX 191
           P A    E  +   P+ + R R    PEV     L  K T E                  
Sbjct: 142 PLALPSLE--KRHEPEPMVRPR--SPPEVQQKSVLYQKTTSE----------------KP 201

Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXVINIKGENIGAVMHITQSSDGSEILKKKP---IS 251
                                     VINIKGEN+GAVMHITQSSD +E  KKKP    S
Sbjct: 202 AKTDHRASEYSSGKPQQKQTHQQQSDVINIKGENVGAVMHITQSSDATETHKKKPTVSYS 261

Query: 252 KENEEKAXXXXXXXXXXXXXXTNFQGVNNSILYNSSLSHRDPGLHLAYSKKPNHGDSLHA 311
            ENE+ +              +NFQGVNNSILYNSSLSHRDPGLHLA++KKP H DS+H 
Sbjct: 262 SENEKDSNKSSSNMPGKSFMNSNFQGVNNSILYNSSLSHRDPGLHLAFTKKPTHADSVHD 304

[Close]

BLAST of Cla97C05G080640 vs. TrEMBL
Match: tr|A0A0A0L5T3|A0A0A0L5T3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119290 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.0e-62
Identity = 174/315 (55.24%), Postives = 202/315 (64.13%), Query Frame = 0


Query: 11  GSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYGG 70
           G+A+RPE QP TAATEPEVFPSA  TTN ++TSPI++R+PR+ SP++K  SPPSSPKY G
Sbjct: 21  GTATRPEPQPFTAATEPEVFPSAVPTTNTFQTSPIKQRTPRLSSPVKKFSSPPSSPKYSG 80

Query: 71  ATTISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVAT-TAPL 130
           A T+SPR PL     +NRY+GE RTSATTSPKTFKPTHISPP SP KP+HSTV T  APL
Sbjct: 81  AGTVSPRXPLXXXXVHNRYEGERRTSATTSPKTFKPTHISPPPSPSKPRHSTVPTAVAPL 140

Query: 131 SPPARTFTEV-------IQTELPDMIFRGRVAREPEVT--PAITLMLKQTDEPLXXXXXX 190
           SP A   ++V       ++   P  I + ++  +   T  P  T   +Q DE        
Sbjct: 141 SPLALPRSQVRREPEHSLRPRSPPEIEQKKILYQTTTTEKPTKTDHYRQNDE-------- 200

Query: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVINIKGENIGAVMHITQSSDGSEI 250
                                               VINIKGEN+GAVMHITQSSDGSE+
Sbjct: 201 ------------------YGASKPQQKQQHQQLQSDVINIKGENVGAVMHITQSSDGSEV 260

Query: 251 LKKKPI---SKENEEKAXXXXXXXXXXXXXXTNFQGVNNSILYNSSLSHRDPGLHLAY-S 310
           +KKKP    SKENEE  XXXXXXXXXXXXXX     VNNSILYNSSLSHRDPGLHLA+ S
Sbjct: 261 IKKKPTVGQSKENEEXXXXXXXXXXXXXXXXXXXXXVNNSILYNSSLSHRDPGLHLAFGS 308

Query: 311 KKPNHGDSLHASTRH 312
           KK  HGDS+H S RH
Sbjct: 321 KKSKHGDSIHDS-RH 308

[Close]

BLAST of Cla97C05G080640 vs. TrEMBL
Match: tr|A0A1S3AVJ6|A0A1S3AVJ6_CUCME (microtubule-associated protein RP/EB family member 1-like OS=Cucumis melo OX=3656 GN=LOC103483157 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.8e-58
Identity = 175/307 (57.00%), Postives = 195/307 (63.52%), Query Frame = 0


Query: 12  SASRPEIQP-LTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKYGG 71
           +A+R E QP  TAATEPEVFPSA  TTN  +TSP+++R+PR+ SP++K PSPPSSPKY G
Sbjct: 22  TAARQETQPAFTAATEPEVFPSAVPTTNTLQTSPVKQRTPRLSSPVKKFPSPPSSPKYSG 81

Query: 72  AT-TISPRKPLSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTVAT-TAP 131
           AT TISPRKPLSP  TYNR+DGE RTSATTSPKTFKPT+ISPP S     HST AT  AP
Sbjct: 82  ATGTISPRKPLSPPSTYNRHDGERRTSATTSPKTFKPTYISPPPSXXXXXHSTAATVVAP 141

Query: 132 LSPPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLXXXXXXXXXXXXXX 191
           LSP A   +EV +   P+   R R   E E    I      T++P               
Sbjct: 142 LSPLALPRSEVRRE--PERSIRPRSPPEIE-QKKILYQTTTTEKP--------------- 201

Query: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVINIKGENIGAVMHITQSSDGSEILKKKPI-- 251
                                       VINIKG+N+GAVMHITQSSDGSEILKKKP   
Sbjct: 202 TKTDYRQTDQYGTSKPQQKQHHQQLQSDVINIKGDNVGAVMHITQSSDGSEILKKKPSVG 261

Query: 252 -SKENEEKAXXXXXXXXXXXXXXTNFQGVNNSILYNSSLSHRDPGLHLAY-SKKPNHGDS 311
            SKENE   XXXXXXXXXXXXXX       NSILYNSSLSHRDPGLHLAY SK P HGDS
Sbjct: 262 QSKENEXXXXXXXXXXXXXXXXXXXXXXXXNSILYNSSLSHRDPGLHLAYSSKNPKHGDS 309

[Close]

BLAST of Cla97C05G080640 vs. TrEMBL
Match: tr|A0A0A0L3R5|A0A0A0L3R5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.9e-10
Identity = 41/96 (42.71%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 218 INIKGENIGAVMHITQSS--DGSEILKK------------KPISKENEEKAXXXXXXXXX 277
           INIKGEN+GAVM I +SS  +G  ++KK               + +N E +         
Sbjct: 157 INIKGENVGAVMEIVESSKREGGHMIKKIKETARGILNNNDMANDQNNEASKAPNSSMPT 216

Query: 278 XXXXXTNFQGVNNSILYNSSLSHRDPGLHLAYSKKP 300
                +NFQ VNNS+LYN++L+HRDPGLHLA+S+ P
Sbjct: 217 NTFLNSNFQSVNNSLLYNANLTHRDPGLHLAFSRNP 252

[Close]

BLAST of Cla97C05G080640 vs. TrEMBL
Match: tr|A0A1S3AV38|A0A1S3AV38_CUCME (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.4e-09
Identity = 86/305 (28.20%), Postives = 119/305 (39.02%), Query Frame = 0


Query: 9   PSGSASRPEIQPLTAATEPEVFPSAPTTTNIYKTSPIRERSPRVPSPIRKLPSPPSSPKY 68
           P  +A++P ++P       ++ P A T T     SP RE    + SP +K  SP +SPKY
Sbjct: 20  PVPAAAQPAVEP-----RYQILPFATTITTPAPASPRRESPRPLSSPPKKATSPFASPKY 79

Query: 69  GGATTISPRKP-----LSPTPTYNRYDGEWRTSATTSPKTFKPTHISPPLSPPKPKHSTV 128
           G + T   R P     +SP  +      E R   TT           PPLSP K + +  
Sbjct: 80  GDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETT-----------PPLSPAKSRRAKT 139

Query: 129 ATTAPLS-PPARTFTEVIQTELPDMIFRGRVAREPEVTPAITLMLKQTDEPLXXXXXXXX 188
               PL+ P  + FT    T  P +        +PEV     +  K  ++P         
Sbjct: 140 XXXXPLALPRNQVFTGNGTTAQPRV--------QPEVETKGIVYNKTVEKP--------- 199

Query: 189 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVINIKGENIGAVMHITQSSD----GS 248
                                             VI +KG N+GAVM I +SS     G 
Sbjct: 200 -----------SKSNRSSGEYGSSKSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGG 259

Query: 249 EILKKKPISK--------ENEEKAXXXXXXXXXXXXXXTNFQGVNNSILYNSSLSHRDPG 296
           E LKK               ++K               +NFQ VNNS+L++SS +HRDPG
Sbjct: 260 ETLKKNETEDVGDVHGYGHEDKKTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPG 280

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BLAST of Cla97C05G080640 vs. TrEMBL
Match: tr|A0A1S3AVL1|A0A1S3AVL1_CUCME (uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.7e-09
Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 218 INIKGENIGAVMHITQSS--DGSEILKK------------KPISKENEEKAXXXXXXXXX 277
           INIKGEN+GAVM I +SS  +G  ++KK               + +N E +         
Sbjct: 156 INIKGENVGAVMEIVESSKREGGHMIKKIKETARGILNNNDMANDQNNEASKTTNSSMPT 215

Query: 278 XXXXXTNFQGVNNSILYNSSLSHRDPGLHLAYSKKP 300
                +NFQ VNNS+LYN++L++RDPGLHL++S+ P
Sbjct: 216 NTFLNSNFQSVNNSLLYNANLTYRDPGLHLSFSRNP 251

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BLAST of Cla97C05G080640 vs. TAIR10
Match: AT2G46630.1 (unknown protein)

HSP 1 Score: 48.5 bits (114), Expect = 8.6e-06
Identity = 37/121 (30.58%), Postives = 48/121 (39.67%), Query Frame = 0


Query: 217 VINIKGENIGAVMHITQSSDGSEI----LKKKPISKENEEKA------------------ 276
           VI I GEN GAVM I +S  G++          +S    EK                   
Sbjct: 264 VITIAGENKGAVMEILRSPQGNKTGGSGTHSSRVSHGTGEKGRRLQXXXXXXXXXXXXXX 323

Query: 277 -------XXXXXXXXXXXXXXTNFQGVNNSILYNSSLSHRDPGLHLAYSKKPNHGDSLHA 309
                                +N Q +NNSI+YNS+ SH DPG+HL  S+KP   +  H 
Sbjct: 324 XXTKNVPNKGNSNLPMKAFMNSNVQMINNSIVYNSTASHHDPGVHLKISRKPGSDNGFHV 383

The following BLAST results are available for this feature:

BLAST of Cla97C05G080640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133796.1	9.0e-62	55.24	PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus] >KGN563...	[more]
XP_008437849.1	1.0e-57	57.00	PREDICTED: microtubule-associated protein RP/EB family member 1-like [Cucumis me...	[more]
XP_022147442.1	1.4e-49	45.29	proline-rich receptor-like protein kinase PERK2 [Momordica charantia]	[more]
XP_022974813.1	4.5e-37	41.78	DNA-directed RNA polymerase II subunit 1-like isoform X1 [Cucurbita maxima]	[more]
XP_022974814.1	4.5e-37	41.78	DNA-directed RNA polymerase II subunit 1-like isoform X2 [Cucurbita maxima] >XP_...	[more]

BLAST of Cla97C05G080640 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5T3\|A0A0A0L5T3_CUCSA	6.0e-62	55.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119290 PE=4 SV=1	[more]
tr\|A0A1S3AVJ6\|A0A1S3AVJ6_CUCME	6.8e-58	57.00	microtubule-associated protein RP/EB family member 1-like OS=Cucumis melo OX=365...	[more]
tr\|A0A0A0L3R5\|A0A0A0L3R5_CUCSA	6.9e-10	42.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119280 PE=4 SV=1	[more]
tr\|A0A1S3AV38\|A0A1S3AV38_CUCME	3.4e-09	28.20	zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1	[more]
tr\|A0A1S3AVL1\|A0A1S3AVL1_CUCME	7.7e-09	40.63	uncharacterized protein LOC103483156 OS=Cucumis melo OX=3656 GN=LOC103483156 PE=...	[more]

BLAST of Cla97C05G080640 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C05G080640 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46630.1	8.6e-06	30.58	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G080640.1	Cla97C05G080640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 291..311
None	No IPR available	PANTHER	PTHR33472	FAMILY NOT NAMED	coord: 10..308

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G080640	CmaCh06G009840	Cucurbita maxima (Rimu)	cmawmbB859
Cla97C05G080640	CmoCh14G021910	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G080640	CsGy3G007800	Cucumber (Gy14) v2	cgybwmbB196

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G080640	Silver-seed gourd	carwmbB0130
Cla97C05G080640	Silver-seed gourd	carwmbB1047
Cla97C05G080640	Cucumber (Gy14) v1	cgywmbB381
Cla97C05G080640	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G080640	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G080640	Cucurbita maxima (Rimu)	cmawmbB862
Cla97C05G080640	Cucurbita moschata (Rifu)	cmowmbB625
Cla97C05G080640	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G080640	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G080640	Wild cucumber (PI 183967)	cpiwmbB399
Cla97C05G080640	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G080640	Cucumber (Chinese Long) v3	cucwmbB395
Cla97C05G080640	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G080640	Cucumber (Chinese Long) v2	cuwmbB381
Cla97C05G080640	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G080640	Melon (DHL92) v3.6.1	medwmbB024
Cla97C05G080640	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G080640	Melon (DHL92) v3.5.1	mewmbB027
Cla97C05G080640	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G080640	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G080640	Watermelon (97103) v1	wmwmbB206
Cla97C05G080640	Watermelon (97103) v1	wmwmbB262
Cla97C05G080640	Wax gourd	wgowmbB191