Cla97C02G041490 (gene) Watermelon (97103) v2

Overview
NameCla97C02G041490
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionLysM domain-containing protein/F-box-like domain-containing protein
LocationCla97Chr02 : 29438290 .. 29440224 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCGACCGTTCAGTCTCTGCCGCTGCAACCTCCACCGGCGGATTCCTCCACTGCCGTACTATCTCCAATGAACTCTCACTTTTTCGCCCTCTCCTGTCGCGACATCCTTCGTCTCATCTTTCAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGATCGGGAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTCCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTATGCGGTAATATTGTTGTTGTTGTCTTATTCATGAGAAAGTGACTGGAAATTAGGGAAAGAACGAGTATAATTTCTGAGAATCTATTCAATTTTAAGGAGTTGCGATCATTTGTTTTCCTTGATCGCTCTCTCTCTCGTTAGACTTTAATCTTGTTTCTTTGAAAAACACGACTATGCGACTGTTTTATGGCTGTTCAAACTTAAGAAGTCCTCTGACTCAATTTTTGTTTACTTGTTGGAGGTGGAAACAGACGAATTGAAAGTAAGGGAACTAGAGTACAGAAAACATTTTAGCCTTCAGTACTCCTGTTATAGATATATGGCTGATTGCAGCAATGTAGCTTCATTTTCTTAACATTGATCTTGACGAATCACTGGTGCTTCGAAGTCCGAACATTAATTGAAATTTGTTAAACCTTTCACAACAATATCTGTACTTCTTACTCTATTGTTTGTGTTCCCAACTCTCAAGTCCATGTTAAATTCAATTATGAAGGACGGTCATGTTCCATTGTTGAGATCAACTCTTTTTGATGTCTATGGACTTTGATACATTGTTGAAATCACCAGCAGTCTGAACAACACTTGAAACTTGAGTATATATATATGTTTTAATGAACCACTTTCATCGAGAAAAAAAAAAATGAAAGAATACAAAAGTAACAAGTCCACTCACGAGGGACCCTTTAAGGGGGATCAATCAAGCAAAATAGATTAGTTATAAAAGAACTTTGAAGTCGAAGCCCAAAGAGATTTACAGAACTTAATAAGAGCCCAAACATCACATCACTAGGCTCCCTTTCCGACCCTCTAAACACTCTATTGTTCCTTTTCCCCCAATGATTCCACATGATAGCACACACCTCAGCCATCCATAAGAAACGACCCCTCTCACAAAAGGGCAGATGGAGGAGGAACTCCTCAATCATATCGCTGATCAATCTTTTTTGTAGCTATGGATTTTAATGTGTTAATTTCTTTTACATATATTGTTCATGTAGGTTGTAGACATAAAATGTCTAAAGAGCATGATGCGGAACCATGGCATTGTTTGAGATGAATATCTTTTTATGGCTGTGGACTTCGGAGTATTGATTTTGTTTATATATATTGTTCTTGTAGGTTACAGACATAAAACGTCTGAACAACATGATGAGCGACCATGGGATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAAGATACTCATTAACAGTATATGCTACATCGAGATGGATGCTATCGCAAAACGGGAAGTTGTGGTGATGTATTTGGATGGAATCCCCACGACCCATCACTTGTATGGTAAGATGACATGCAAACATGGTACGTCTTCTGTTCAAGTGAACAAGCGGGTACTGCATACATTGAGTCGGAGCATGATGGTTGATGATGAAACAGCTCAATATTACTTATCCATTTCAAATGGCAATCCTCGAGCTGCTCTTACAGAATTCGCCGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG

mRNA sequence

ATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCGACCGTTCAGTCTCTGCCGCTGCAACCTCCACCGGCGGATTCCTCCACTGCCGTACTATCTCCAATGAACTCTCACTTTTTCGCCCTCTCCTGTCGCGACATCCTTCGTCTCATCTTTCAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGATCGGGAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTCCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACGTCTGAACAACATGATGAGCGACCATGGGATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAAGATACTCATTAACAGTATATGCTACATCGAGATGGATGCTATCGCAAAACGGGAAGTTGTGGTGATGTATTTGGATGGAATCCCCACGACCCATCACTTGTATGGTAAGATGACATGCAAACATGGTACGTCTTCTGTTCAAGTGAACAAGCGGGTACTGCATACATTGAGTCGGAGCATGATGGTTGATGATGAAACAGCTCAATATTACTTATCCATTTCAAATGGCAATCCTCGAGCTGCTCTTACAGAATTCGCCGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG

Coding sequence (CDS)

ATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCGACCGTTCAGTCTCTGCCGCTGCAACCTCCACCGGCGGATTCCTCCACTGCCGTACTATCTCCAATGAACTCTCACTTTTTCGCCCTCTCCTGTCGCGACATCCTTCGTCTCATCTTTCAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGATCGGGAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTCCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACGTCTGAACAACATGATGAGCGACCATGGGATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAAGATACTCATTAACAGTATATGCTACATCGAGATGGATGCTATCGCAAAACGGGAAGTTGTGGTGATGTATTTGGATGGAATCCCCACGACCCATCACTTGTATGGTAAGATGACATGCAAACATGGTACGTCTTCTGTTCAAGTGAACAAGCGGGTACTGCATACATTGAGTCGGAGCATGATGGTTGATGATGAAACAGCTCAATATTACTTATCCATTTCAAATGGCAATCCTCGAGCTGCTCTTACAGAATTCGCCGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG

Protein sequence

MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
Homology
[Close]
BLAST of Cla97C02G041490 vs. NCBI nr
Match: XP_004139174.1 (PREDICTED: F-box protein At1g55000 [Cucumis sativus] >KGN60915.1 hypothetical protein Csa_2G022840 [Cucumis sativus])

HSP 1 Score: 496.5 bits (1277), Expect = 5.7e-137
Identity = 242/269 (89.96%), Postives = 252/269 (93.68%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSP + S P Q   AD S A+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQXXXADHSAAILSPMNSHFFALSCRDILRLIF 60

Query: 61  QNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFA 120
           +NLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDV+GKPSSWSFWRDN LGKFA
Sbjct: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP +LINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYI 180

Query: 181 EMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQY 240
           EMDAIAKREV V+YLDGIP T HLYGK+T + G SSVQVNKRVLH+LSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240

Query: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 270
           YLSISNGNPRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 269

[Close]
BLAST of Cla97C02G041490 vs. NCBI nr
Match: XP_022150720.1 (F-box protein At1g55000 [Momordica charantia])

HSP 1 Score: 485.0 bits (1247), Expect = 1.7e-133
Identity = 238/269 (88.48%), Postives = 251/269 (93.31%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNP+  V S    PP ADSSTAVLSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60

Query: 61  QNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFA 120
           + LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KDVIGKPSS SFWRDN LGKFA
Sbjct: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYI 180
           ISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQY 240
           EMDAIAKREV V+YLDGIPTTHHLYGK+TC+ G SSVQVNK+VLH+LSRSMMVDDETA+Y
Sbjct: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240

Query: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 270
           YLSIS+G+PRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269

[Close]
BLAST of Cla97C02G041490 vs. NCBI nr
Match: XP_023537183.1 (F-box protein At1g55000 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.0 bits (1229), Expect = 2.1e-131
Identity = 240/274 (87.59%), Postives = 250/274 (91.24%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPSPTVQSLP-----LQPPPADSSTAVLSPMNSHFFALSCRDI 60
           MGCCC++DDDVEILRHL+PSPTVQS P      QP   DSSTAVLSPMNSHFFALSCRDI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60

Query: 61  LRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNS 120
           LRLIF+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVKDVIGKPSS SFWRDN 
Sbjct: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILIN 180
           LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILIN
Sbjct: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180

Query: 181 SICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDD 240
           SICYIEMDAIAKREV  +YLDGIPTTHHLYGK T  HG SSVQV KRVLH+LSRSMMVDD
Sbjct: 181 SICYIEMDAIAKREVATLYLDGIPTTHHLYGKETDDHGMSSVQVKKRVLHSLSRSMMVDD 240

Query: 241 ETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA 270
           ETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Sbjct: 241 ETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 274

[Close]
BLAST of Cla97C02G041490 vs. NCBI nr
Match: XP_022937590.1 (F-box protein At1g55000 [Cucurbita moschata])

HSP 1 Score: 477.2 bits (1227), Expect = 3.6e-131
Identity = 239/270 (88.52%), Postives = 249/270 (92.22%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSPTVQS P Q P   DSSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKF 120
           F+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVKDVIGKPSS SFWRDN LGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQ 240
           IEMDAIAKREV  +YLDGIPTTHHLYGK T   G SSVQV KRVLH+LSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGNPRAALTEFAEDIRWERHMSIA 270
           YYLSIS+G+PRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]
BLAST of Cla97C02G041490 vs. NCBI nr
Match: XP_022965884.1 (F-box protein At1g55000 [Cucurbita maxima])

HSP 1 Score: 473.8 bits (1218), Expect = 3.9e-130
Identity = 237/270 (87.78%), Postives = 248/270 (91.85%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTAVLSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSPTVQS P Q P    SSTAVLSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPGSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKF 120
           F+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVKDVIGKPSS SFWRDN LGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRER+LIPIGNP ILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERMLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQ 240
           IEMDAIAKREV  +YLDGIPTTHHLYGK T   G SSVQV KRVLH+LSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETDDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGNPRAALTEFAEDIRWERHMSIA 270
           YYLSIS+G+PRAALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]
BLAST of Cla97C02G041490 vs. TrEMBL
Match: tr|A0A0A0LFS6|A0A0A0LFS6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 3.7e-137
Identity = 242/269 (89.96%), Postives = 252/269 (93.68%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSP + S P Q   AD S A+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQXXXADHSAAILSPMNSHFFALSCRDILRLIF 60

Query: 61  QNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFA 120
           +NLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDV+GKPSSWSFWRDN LGKFA
Sbjct: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP +LINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYI 180

Query: 181 EMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQY 240
           EMDAIAKREV V+YLDGIP T HLYGK+T + G SSVQVNKRVLH+LSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240

Query: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 270
           YLSISNGNPRAALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 269

[Close]
BLAST of Cla97C02G041490 vs. TrEMBL
Match: tr|A0A1S3BZK8|A0A1S3BZK8_CUCME (Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103494917 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.6e-106
Identity = 191/218 (87.61%), Postives = 200/218 (91.74%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSP V S P      D STA+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVHSPPXXXXXXDHSTAILSPMNSHFFALSCRDILRLIF 60

Query: 61  QNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFA 120
           ++LSIPDLARSSCVCRLWHSVASDQEIV+GAFKAPWKVKDV+GKPSSWSFWRDN LGKFA
Sbjct: 61  EHLSIPDLARSSCVCRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQ 219
           EMDAIAKREV V+YLDGIP T HLYGK+T + G SSVQ
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQ 218

[Close]
BLAST of Cla97C02G041490 vs. TrEMBL
Match: tr|A0A2P5CFM8|A0A2P5CFM8_9ROSA (F-box domain LysM domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_286610 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 7.9e-95
Identity = 177/270 (65.56%), Postives = 215/270 (79.63%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPSPTVQS--LPLQPPPADSSTAVLSPMNSHFFALSCRDILRL 60
           MGCCC++DDD EIL+HLNP+  +QS    L   P+ SS  V+SPMNSHF AL+ RD+LR+
Sbjct: 1   MGCCCDEDDD-EILKHLNPTIPIQSQFQTLTLDPSSSSGDVISPMNSHFSALTSRDLLRV 60

Query: 61  IFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGK 120
           IFQ L IPDLARSSCVCRLW+SVASD+EI++ AFKAPWK+  V+G+P S SFWRDN+LGK
Sbjct: 61  IFQKLPIPDLARSSCVCRLWNSVASDKEILTRAFKAPWKLAHVVGEPLSGSFWRDNNLGK 120

Query: 121 FAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSIC 180
           FAISHRI+RGDS+ASLAVKYSVQV DIKRLNNMMS+HGIYSRERLLIP+ +P IL+   C
Sbjct: 121 FAISHRIVRGDSVASLAVKYSVQVMDIKRLNNMMSEHGIYSRERLLIPVSDPNILVGGTC 180

Query: 181 YIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETA 240
           Y+E+DA AKREV V+YLDG   +      +  +   SS Q  KRV+H+L RSM VDD TA
Sbjct: 181 YVELDAHAKREVAVLYLDGAGPSQKTRSLLQRR---SSEQAKKRVIHSLKRSMQVDDGTA 240

Query: 241 QYYLSISNGNPRAALTEFAEDIRWERHMSI 269
           +YY SISNG+PRAA +EF+ED+RWER   +
Sbjct: 241 EYYFSISNGDPRAAFSEFSEDLRWEREAGL 266

[Close]
BLAST of Cla97C02G041490 vs. TrEMBL
Match: tr|A0A2P5DT00|A0A2P5DT00_PARAD (F-box domain LysM domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_034650 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.3e-94
Identity = 179/271 (66.05%), Postives = 216/271 (79.70%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPS-PT-VQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRL 60
           MGCCC++DDD EIL+HLNP+ PT  QS  L   P+ SS  V+SPMNSHF AL+ RD+LR+
Sbjct: 1   MGCCCDEDDD-EILKHLNPTIPTQSQSQTLTLDPSSSSGDVISPMNSHFSALTSRDLLRV 60

Query: 61  IFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGK 120
           IFQ L I DLARSSCVCRLW+SVASD+EI++ AFKAPWK+  V+G+P S SFWRDN+LGK
Sbjct: 61  IFQKLPILDLARSSCVCRLWNSVASDKEILTRAFKAPWKLAHVVGEPLSGSFWRDNNLGK 120

Query: 121 FAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSIC 180
           FAISHRI+RGDS ASLAVKYSVQV DIKRLNNMMS+HGIYSRERLLIP+ +P IL+   C
Sbjct: 121 FAISHRIVRGDSAASLAVKYSVQVMDIKRLNNMMSEHGIYSRERLLIPVSDPNILVGGTC 180

Query: 181 YIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETA 240
           Y+E+DA AKREVVV+YLDG   +      +  +   SS Q  KRV+H L RSM VDD TA
Sbjct: 181 YVELDAYAKREVVVLYLDGAGPSQRTQSLLRRR---SSEQAKKRVIHYLKRSMQVDDGTA 240

Query: 241 QYYLSISNGNPRAALTEFAEDIRWERHMSIA 270
           +YY SISNG+PRAA +EF+ED+RWER + ++
Sbjct: 241 EYYFSISNGDPRAAFSEFSEDLRWEREVGLS 267

[Close]
BLAST of Cla97C02G041490 vs. TrEMBL
Match: tr|M5WCC8|M5WCC8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G324800 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 6.3e-92
Identity = 170/277 (61.37%), Postives = 215/277 (77.62%), Query Frame = 0 

Query: 1   MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIF 60
           MGCC ++++D +IL  LNP+ T + L       D S + +SPMNSHF AL+CRD LRLIF
Sbjct: 1   MGCCGDEENDDDILNPLNPTTTTEIL-------DFSDSTISPMNSHFSALTCRDTLRLIF 60

Query: 61  QNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFA 120
           + L IPDLARSSCVCR+W+SVASDQEIV+ AFKAPW +K +IGKP+S +FWRDNSLGKFA
Sbjct: 61  EKLPIPDLARSSCVCRVWNSVASDQEIVTRAFKAPWNLKHIIGKPASGNFWRDNSLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYI 180
           ISHRI+RGDS+ASLAVKYSVQV DIKRLNN MS+HGIYSRERLLIPI NP++L+ + CY+
Sbjct: 121 ISHRIVRGDSIASLAVKYSVQVMDIKRLNNTMSEHGIYSRERLLIPISNPEMLLQATCYV 180

Query: 181 EMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSS--------VQVNKRVLHTLSRSMM 240
           E+D  AKREV V+YL+G P  H      T  +G+SS        +Q  KRV+ +L RSM 
Sbjct: 181 EVDTCAKREVAVLYLEGGPELH-----KTTSNGSSSTSSCSATDLQSKKRVIESLRRSMQ 240

Query: 241 VDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA 270
           +DD TA YYL+I++G+PRAAL++F++D+RWE H+  A
Sbjct: 241 IDDATAHYYLTIADGDPRAALSQFSQDLRWENHLGFA 265

[Close]
BLAST of Cla97C02G041490 vs. Swiss-Prot
Match: sp|Q9FZ32|FB60_ARATH (F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.5e-72
Identity = 129/220 (58.64%), Postives = 170/220 (77.27%), Query Frame = 0 

Query: 49  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSW 108
           AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLS 228
           NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ G+PR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]
BLAST of Cla97C02G041490 vs. Swiss-Prot
Match: sp|Q6DEF4|LYSM2_DANRE (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Danio rerio OX=7955 GN=lysmd2 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.0e-04
Identity = 22/56 (39.29%), Postives = 35/56 (62.50%), Query Frame = 0 

Query: 116 LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPK 172
           LG+  I HR+  G++L  +A+KY V +  IKR+N + S+  I+ R  L IP+ + K
Sbjct: 60  LGEKYIEHRVTDGETLQGIALKYGVTMEQIKRVNKLFSNDCIFLRNTLSIPVKSEK 115

[Close]
BLAST of Cla97C02G041490 vs. Swiss-Prot
Match: sp|Q5HZA4|LYSM1_RAT (LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Lysmd1 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.6e-04
Identity = 25/71 (35.21%), Postives = 41/71 (57.75%), Query Frame = 0 

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI-GNPKILINSICY 180
           + H++  GD+LA LA+KY V +  IKR N + ++  I+ ++ L IPI   P+ L N +  
Sbjct: 40  LEHQLEPGDTLAGLALKYGVTMEQIKRTNRLYTNDSIFLKKTLYIPILTEPRDLFNGLDS 99

Query: 181 IEMDAIAKREV 191
            E +   + EV
Sbjct: 100 EEEENDGEEEV 110

[Close]
BLAST of Cla97C02G041490 vs. TAIR10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 274.2 bits (700), Expect = 8.3e-74
Identity = 129/220 (58.64%), Postives = 170/220 (77.27%), Query Frame = 0 

Query: 49  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSW 108
           AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIG 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLS 228
           NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ G+PR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]
BLAST of Cla97C02G041490 vs. TAIR10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.5e-06
Identity = 22/54 (40.74%), Postives = 39/54 (72.22%), Query Frame = 0 

Query: 114 NSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI 168
           NS  +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + L IP+
Sbjct: 71  NSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKSLQIPL 124

[Close]
BLAST of Cla97C02G041490 vs. TAIR10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 20/47 (42.55%), Postives = 34/47 (72.34%), Query Frame = 0 

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI 168
           I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Sbjct: 70  IEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLRIPL 116

The following BLAST results are available for this feature:
BLAST of Cla97C02G041490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139174.15.7e-13789.96PREDICTED: F-box protein At1g55000 [Cucumis sativus] >KGN60915.1 hypothetical pr... [more]
XP_022150720.11.7e-13388.48F-box protein At1g55000 [Momordica charantia][more]
XP_023537183.12.1e-13187.59F-box protein At1g55000 [Cucurbita pepo subsp. pepo][more]
XP_022937590.13.6e-13188.52F-box protein At1g55000 [Cucurbita moschata][more]
XP_022965884.13.9e-13087.78F-box protein At1g55000 [Cucurbita maxima][more]
BLAST of Cla97C02G041490 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LFS6|A0A0A0LFS6_CUCSA3.7e-13789.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 SV=1[more]
tr|A0A1S3BZK8|A0A1S3BZK8_CUCME2.6e-10687.61Lipoxygenase OS=Cucumis melo OX=3656 GN=LOC103494917 PE=3 SV=1[more]
tr|A0A2P5CFM8|A0A2P5CFM8_9ROSA7.9e-9565.56F-box domain LysM domain containing protein OS=Trema orientalis OX=63057 GN=TorR... [more]
tr|A0A2P5DT00|A0A2P5DT00_PARAD2.3e-9466.05F-box domain LysM domain containing protein OS=Parasponia andersonii OX=3476 GN=... [more]
tr|M5WCC8|M5WCC8_PRUPE6.3e-9261.37Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G324800 PE=4 SV=1[more]
BLAST of Cla97C02G041490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FZ32|FB60_ARATH1.5e-7258.64F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1[more]
sp|Q6DEF4|LYSM2_DANRE3.0e-0439.29LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Danio rer... [more]
sp|Q5HZA4|LYSM1_RAT8.6e-0435.21LysM and putative peptidoglycan-binding domain-containing protein 1 OS=Rattus no... [more]
BLAST of Cla97C02G041490 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G55000.18.3e-7458.64peptidoglycan-binding LysM domain-containing protein[more]
AT5G08200.11.5e-0640.74peptidoglycan-binding LysM domain-containing protein[more]
AT5G23130.11.3e-0542.55Peptidoglycan-binding LysM domain-containing protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR001810F-box_dom
IPR036779LysM_dom_sf
IPR018392LysM_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0007049 cell cycle
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0031408 oxylipin biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0017053 transcriptional repressor complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G041490.1Cla97C02G041490.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018392LysM domainSMARTSM00257LysM_2coord: 122..166
e-value: 3.3E-4
score: 30.0
IPR018392LysM domainPFAMPF01476LysMcoord: 124..166
e-value: 8.8E-7
score: 28.8
IPR018392LysM domainPROSITEPS51782LYSMcoord: 121..165
score: 11.711
IPR018392LysM domainCDDcd00118LysMcoord: 121..165
e-value: 1.75956E-7
score: 45.5541
IPR036779LysM domain superfamilyGENE3DG3DSA:3.10.350.10coord: 115..171
e-value: 4.8E-11
score: 44.0
IPR001810F-box domainPFAMPF12937F-box-likecoord: 54..85
e-value: 3.2E-6
score: 26.8
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 52..87
e-value: 7.6E-9
score: 37.5
NoneNo IPR availablePANTHERPTHR20932:SF8LD22649Pcoord: 37..265
NoneNo IPR availablePANTHERPTHR20932LOC443603 PROTEIN-RELATEDcoord: 37..265
NoneNo IPR availableSUPERFAMILYSSF54106LysM domaincoord: 122..166
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 54..112

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C02G041490Cla019895Watermelon (97103) v1wmwmbB316
Cla97C02G041490Csa2G022840Cucumber (Chinese Long) v2cuwmbB118
Cla97C02G041490MELO3C004254Melon (DHL92) v3.5.1mewmbB376
Cla97C02G041490ClCG02G015760Watermelon (Charleston Gray)wcgwmbB138
Cla97C02G041490CSPI02G04010Wild cucumber (PI 183967)cpiwmbB120
Cla97C02G041490Cucsa.091400Cucumber (Gy14) v1cgywmbB100
Cla97C02G041490CmaCh12G010700Cucurbita maxima (Rimu)cmawmbB175
Cla97C02G041490CmoCh12G010830Cucurbita moschata (Rifu)cmowmbB161
Cla97C02G041490Lsi11G005520Bottle gourd (USVL1VR-Ls)lsiwmbB087
Cla97C02G041490CsGy2G004110Cucumber (Gy14) v2cgybwmbB114
Cla97C02G041490Carg17541Silver-seed gourdcarwmbB0746
Cla97C02G041490CsaV3_2G005340Cucumber (Chinese Long) v3cucwmbB123
Cla97C02G041490BhiUN32G16Wax gourdwgowmbB668
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G041490Cucurbita maxima (Rimu)cmawmbB810
Cla97C02G041490Cucurbita moschata (Rifu)cmowmbB785
Cla97C02G041490Melon (DHL92) v3.6.1medwmbB367