Cla97C02G041290 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G041290
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	PsbP-like protein 1
Location	Cla97Chr02 : 29144925 .. 29146434 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAAAGAACATCCAGAGTTCATATACCCTGCGAGTTGGGTAGGAGACCAGAGGCTGCTATATCGGGCAGCTGAAAAGTCGGAATATGAACGATCACTGGACCCTCCACCCTTGACCGGTTCCACCATGGGTCGCCGTCATCAGAATGTTAATGAGCCAGTGGTTGCATTCGGTCCTCCAGGTTCGAGTGGAGAGCTCAATGTTAGCGTCATCGTGTCTCCGGTACCTCTTGATTTTTCGTAAGTCACCTAACTTATCTATGATTACTTGAGTCCTACCGTGCAAATGGGAATTCAAAATCCTTCAATCCTTCCACATTTTAACATATGGCGGAGGGATTGATCATAAAGTCCTAGATTTGTGATATTTCAAAAGTCCTTTGGGAGATGTTTAACTCTATTTAATGAACCCGGGTTGGTTTCTAAATTTAGATCATAAAGGAGCTAGGTTAGGTTATAAAAACAAAGGTCCACATAGCTTATGTTCAATTTGTGAGTTCATGATTTATAAAATTATGAGAAAAACTTAGGTGTGGCAAGATTACAATTTCTTTGTGCAGCCTAGGCAATTGTCCAAACTTACATGTGGTAATTCTTTTTAATAATTTTTAACTTTTTTTTGTGTGTTTGTGTACATGAAAGGGAAAGCATGAATTAGGTGCATGCCACCTTATACCAACTAGCAACAGTACTAGCTAGTTGCATTTCATTTTCGTCGATAGGAACATGCAGTTCAATATTACCAAAAATGAGAAACCACACAAAAATGCCATTTCTTTCTTGGTTGGACCCAGTGATTTCAAAAAAAGAAAAAAGTATCCGCTGGCAGTCTAAGCTGCACCTAATCATTACTCTAAAATTATTGGATTCAGAATTTCTATACACAGTCAAAAGGAGATAGTTTAAAATGGAATGAAGCCACAATAATGGTGGTTGTTAATCAAGCTGAGCAATAGTTTGAAATTTTGCTAGTAGGCCTTGCCTAGTTCAAATGAAATTTGATTCTAAGTAAGATTTCTCCAATAGGAACTACCTAGGAGGATTTATCAAACCATAGACACTATTTATGACATTTTATGAAACTGTAAGAACTAACTTCTAACTTTTAAAAGCATAGGGACTAAACTCTGACTTTCTCCAAACCATTAGGAACAAATTTGCAATTTAACTTCTCTTTTCCATTCTTTGGATTACTACAAAGAATTGAAGCATTTGGAGGCCCAGATGAAGTAGGAGAAGCTGTGATCAGGACTATTACAAGGGCCAGCAAACGCTCTGATCTTAAAGGAACCTTGATACAAACAACTCTGAGAGAGGATTTGCTAAACAAATACTATGAACTGGAATTCAAAGTGGAAAGCTCCTCGTTTCGGCGGCACAACATTGCTGTTTGTTGTGCTCATCGGGGCAAATTATATACACTGAATGCCCAGGCACCTGAATCAGAATGGCCAGGTCTAAAATCAGAGATGAAGACAATTGCCAATTCTTTTTGTCTCTCAGCTTGA

mRNA sequence

ATGTTTAAAGAACATCCAGAGTTCATATACCCTGCGAGTTGGGTAGGAGACCAGAGGCTGCTATATCGGGCAGCTGAAAAGTCGGAATATGAACGATCACTGGACCCTCCACCCTTGACCGGTTCCACCATGGGTCGCCGTCATCAGAATGTTAATGAGCCAGTGGTTGCATTCGGTCCTCCAGGTTCGAGTGGAGAGCTCAATGTTAGCGTCATCGTGTCTCCGGTACCTCTTGATTTTTCAATTGAAGCATTTGGAGGCCCAGATGAAGTAGGAGAAGCTGTGATCAGGACTATTACAAGGGCCAGCAAACGCTCTGATCTTAAAGGAACCTTGATACAAACAACTCTGAGAGAGGATTTGCTAAACAAATACTATGAACTGGAATTCAAAGTGGAAAGCTCCTCGTTTCGGCGGCACAACATTGCTGTTTGTTGTGCTCATCGGGGCAAATTATATACACTGAATGCCCAGGCACCTGAATCAGAATGGCCAGGTCTAAAATCAGAGATGAAGACAATTGCCAATTCTTTTTGTCTCTCAGCTTGA

Coding sequence (CDS)

ATGTTTAAAGAACATCCAGAGTTCATATACCCTGCGAGTTGGGTAGGAGACCAGAGGCTGCTATATCGGGCAGCTGAAAAGTCGGAATATGAACGATCACTGGACCCTCCACCCTTGACCGGTTCCACCATGGGTCGCCGTCATCAGAATGTTAATGAGCCAGTGGTTGCATTCGGTCCTCCAGGTTCGAGTGGAGAGCTCAATGTTAGCGTCATCGTGTCTCCGGTACCTCTTGATTTTTCAATTGAAGCATTTGGAGGCCCAGATGAAGTAGGAGAAGCTGTGATCAGGACTATTACAAGGGCCAGCAAACGCTCTGATCTTAAAGGAACCTTGATACAAACAACTCTGAGAGAGGATTTGCTAAACAAATACTATGAACTGGAATTCAAAGTGGAAAGCTCCTCGTTTCGGCGGCACAACATTGCTGTTTGTTGTGCTCATCGGGGCAAATTATATACACTGAATGCCCAGGCACCTGAATCAGAATGGCCAGGTCTAAAATCAGAGATGAAGACAATTGCCAATTCTTTTTGTCTCTCAGCTTGA

Protein sequence

MFKEHPEFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGELNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA

Homology

[Close]

BLAST of Cla97C02G041290 vs. NCBI nr
Match: XP_008454371.1 (PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X1 [Cucumis melo] >XP_016901931.1 PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X1 [Cucumis melo] >XP_016901934.1 PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 2.1e-87
Identity = 162/179 (90.50%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 4   EHPEFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGS 63
           EHPEFIYP+SWVGDQRLLYR AEKSEYERSLDPPPLT STM RR +NVNEP+VAFGPPGS
Sbjct: 105 EHPEFIYPSSWVGDQRLLYREAEKSEYERSLDPPPLTNSTMDRRRRNVNEPLVAFGPPGS 164

Query: 64  SGELNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN 123
           SGELNVSVIVS VP DFSIEAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL 
Sbjct: 165 SGELNVSVIVSSVPPDFSIEAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLT 224

Query: 124 KYYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 183
           KYYELEFKVES++F+RHNIAVCCA RGKLYTLNAQAPESEWPGLKS+MKTIA+SFCLSA
Sbjct: 225 KYYELEFKVESTAFQRHNIAVCCARRGKLYTLNAQAPESEWPGLKSKMKTIASSFCLSA 283

[Close]

BLAST of Cla97C02G041290 vs. NCBI nr
Match: XP_004144823.1 (PREDICTED: psbP domain-containing protein 7, chloroplastic [Cucumis sativus] >KGN60943.1 hypothetical protein Csa_2G030040 [Cucumis sativus])

HSP 1 Score: 329.7 bits (844), Expect = 6.2e-87
Identity = 163/176 (92.61%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 7   EFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGE 66
           EFIYP+SWVGDQRLLYRAAEK EYERSLDPPPLT STM RR +NVNEPVVAFGPPGSSGE
Sbjct: 105 EFIYPSSWVGDQRLLYRAAEKLEYERSLDPPPLTDSTMDRRRRNVNEPVVAFGPPGSSGE 164

Query: 67  LNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYY 126
           LNVSVIVSPVPLDFSIEAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYY
Sbjct: 165 LNVSVIVSPVPLDFSIEAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYY 224

Query: 127 ELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 183
           ELEFKVES++FRRHNIAVCCA RGKLYTLNAQAPESEW GLKS+MKTIANSFCLSA
Sbjct: 225 ELEFKVESTAFRRHNIAVCCARRGKLYTLNAQAPESEWAGLKSKMKTIANSFCLSA 280

[Close]

BLAST of Cla97C02G041290 vs. NCBI nr
Match: XP_008454379.1 (PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 323.2 bits (827), Expect = 5.8e-85
Identity = 159/176 (90.34%), Postives = 168/176 (95.45%), Query Frame = 0


Query: 7   EFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGE 66
           EFIYP+SWVGDQRLLYR AEKSEYERSLDPPPLT STM RR +NVNEP+VAFGPPGSSGE
Sbjct: 105 EFIYPSSWVGDQRLLYREAEKSEYERSLDPPPLTNSTMDRRRRNVNEPLVAFGPPGSSGE 164

Query: 67  LNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYY 126
           LNVSVIVS VP DFSIEAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYY
Sbjct: 165 LNVSVIVSSVPPDFSIEAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYY 224

Query: 127 ELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 183
           ELEFKVES++F+RHNIAVCCA RGKLYTLNAQAPESEWPGLKS+MKTIA+SFCLSA
Sbjct: 225 ELEFKVESTAFQRHNIAVCCARRGKLYTLNAQAPESEWPGLKSKMKTIASSFCLSA 280

[Close]

BLAST of Cla97C02G041290 vs. NCBI nr
Match: XP_022150742.1 (psbP domain-containing protein 7, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 321.2 bits (822), Expect = 2.2e-84
Identity = 161/181 (88.95%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 4   EHPEFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGS 63
           +HPEFIYP SWVGDQRLLYRAAEKSE+ERSLDPPPLT ST  RR +NVNEPVVAFGPPGS
Sbjct: 105 QHPEFIYPESWVGDQRLLYRAAEKSEFERSLDPPPLTTSTADRRRRNVNEPVVAFGPPGS 164

Query: 64  SGELNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN 123
           SGELNVSVIVSPVPLDFSIEAFGGP EVGEAVIRTIT+ASKR DLKGTLIQTTLREDL  
Sbjct: 165 SGELNVSVIVSPVPLDFSIEAFGGPKEVGEAVIRTITKASKRPDLKGTLIQTTLREDLQR 224

Query: 124 --KYYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLS 183
             KYYELEFKVESSSF+RHNIAVCCA RGKLYTLNAQAPESEWP LK E+KTIANSFCLS
Sbjct: 225 NVKYYELEFKVESSSFQRHNIAVCCARRGKLYTLNAQAPESEWPVLKPEIKTIANSFCLS 284

[Close]

BLAST of Cla97C02G041290 vs. NCBI nr
Match: XP_023537530.1 (psbP domain-containing protein 7, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537531.1 psbP domain-containing protein 7, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.6 bits (810), Expect = 5.4e-83
Identity = 158/181 (87.29%), Postives = 165/181 (91.16%), Query Frame = 0


Query: 4   EHPEFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGS 63
           EHPEFIYPASWVGDQRLLYRA EKSE+ERSLDPPPLT S M RR +NVNEP+VAFGPPGS
Sbjct: 105 EHPEFIYPASWVGDQRLLYRAVEKSEFERSLDPPPLTSSNMDRRRRNVNEPLVAFGPPGS 164

Query: 64  SGELNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN 123
           SGELNVSVIVSPV  DFSIEAFGGP+EVGEAVIRTITRASKR DLKGTLIQTTLRED   
Sbjct: 165 SGELNVSVIVSPVSPDFSIEAFGGPNEVGEAVIRTITRASKRPDLKGTLIQTTLREDSTR 224

Query: 124 --KYYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLS 183
             KYYE EFKVESSSFRRHN+AVC  +RGKLYTLNAQAPESEWPGLKSEM+TIANSFCLS
Sbjct: 225 NVKYYEQEFKVESSSFRRHNVAVCFVYRGKLYTLNAQAPESEWPGLKSEMRTIANSFCLS 284

[Close]

BLAST of Cla97C02G041290 vs. TrEMBL
Match: tr|A0A1S4E131|A0A1S4E131_CUCME (psbP domain-containing protein 7, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494788 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.4e-87
Identity = 162/179 (90.50%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 4   EHPEFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGS 63
           EHPEFIYP+SWVGDQRLLYR AEKSEYERSLDPPPLT STM RR +NVNEP+VAFGPPGS
Sbjct: 105 EHPEFIYPSSWVGDQRLLYREAEKSEYERSLDPPPLTNSTMDRRRRNVNEPLVAFGPPGS 164

Query: 64  SGELNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN 123
           SGELNVSVIVS VP DFSIEAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL 
Sbjct: 165 SGELNVSVIVSSVPPDFSIEAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLT 224

Query: 124 KYYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 183
           KYYELEFKVES++F+RHNIAVCCA RGKLYTLNAQAPESEWPGLKS+MKTIA+SFCLSA
Sbjct: 225 KYYELEFKVESTAFQRHNIAVCCARRGKLYTLNAQAPESEWPGLKSKMKTIASSFCLSA 283

[Close]

BLAST of Cla97C02G041290 vs. TrEMBL
Match: tr|A0A0A0LGE5|A0A0A0LGE5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030040 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 4.1e-87
Identity = 163/176 (92.61%), Postives = 169/176 (96.02%), Query Frame = 0


Query: 7   EFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGE 66
           EFIYP+SWVGDQRLLYRAAEK EYERSLDPPPLT STM RR +NVNEPVVAFGPPGSSGE
Sbjct: 105 EFIYPSSWVGDQRLLYRAAEKLEYERSLDPPPLTDSTMDRRRRNVNEPVVAFGPPGSSGE 164

Query: 67  LNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYY 126
           LNVSVIVSPVPLDFSIEAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYY
Sbjct: 165 LNVSVIVSPVPLDFSIEAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYY 224

Query: 127 ELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 183
           ELEFKVES++FRRHNIAVCCA RGKLYTLNAQAPESEW GLKS+MKTIANSFCLSA
Sbjct: 225 ELEFKVESTAFRRHNIAVCCARRGKLYTLNAQAPESEWAGLKSKMKTIANSFCLSA 280

[Close]

BLAST of Cla97C02G041290 vs. TrEMBL
Match: tr|A0A1S3BYG5|A0A1S3BYG5_CUCME (psbP domain-containing protein 7, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494788 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.8e-85
Identity = 159/176 (90.34%), Postives = 168/176 (95.45%), Query Frame = 0


Query: 7   EFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGE 66
           EFIYP+SWVGDQRLLYR AEKSEYERSLDPPPLT STM RR +NVNEP+VAFGPPGSSGE
Sbjct: 105 EFIYPSSWVGDQRLLYREAEKSEYERSLDPPPLTNSTMDRRRRNVNEPLVAFGPPGSSGE 164

Query: 67  LNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLNKYY 126
           LNVSVIVS VP DFSIEAFGGP+EVGEAVIRTITRASKRSDLKGTLIQTTLREDLL KYY
Sbjct: 165 LNVSVIVSSVPPDFSIEAFGGPNEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLTKYY 224

Query: 127 ELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLSA 183
           ELEFKVES++F+RHNIAVCCA RGKLYTLNAQAPESEWPGLKS+MKTIA+SFCLSA
Sbjct: 225 ELEFKVESTAFQRHNIAVCCARRGKLYTLNAQAPESEWPGLKSKMKTIASSFCLSA 280

[Close]

BLAST of Cla97C02G041290 vs. TrEMBL
Match: tr|V4TAP0|V4TAP0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002020mg PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.5e-68
Identity = 134/183 (73.22%), Postives = 155/183 (84.70%), Query Frame = 0


Query: 5   HPEFIYPASWVGDQRLLYRAAEKSEYERSLDPPPL---TGSTMGRRHQNVNEPVVAFGPP 64
           H EFIYP SWVGDQ LLYRAAEKSE+ERSLDPPP+     S+ GRR QN+NEP+VAFGPP
Sbjct: 115 HVEFIYPDSWVGDQTLLYRAAEKSEFERSLDPPPINKNVKSSNGRR-QNINEPIVAFGPP 174

Query: 65  GSSGELNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDL 124
           GS+GELNVS IVSPVP DFSIEAFGGP EVGEAV+RTIT + +R D+KG+LI++ LRED 
Sbjct: 175 GSTGELNVSAIVSPVPPDFSIEAFGGPKEVGEAVVRTITGSGRRPDVKGSLIESNLREDS 234

Query: 125 LN--KYYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFC 183
           L   KYYELEF+VES SF+RHNIAVCCA  GKLYTLNAQAPES WP +KSE+ T+A+SF 
Sbjct: 235 LRSIKYYELEFRVESPSFQRHNIAVCCARNGKLYTLNAQAPESVWPEVKSELYTVADSFS 294

[Close]

BLAST of Cla97C02G041290 vs. TrEMBL
Match: tr|V4T5F4|V4T5F4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002020mg PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.6e-67
Identity = 133/181 (73.48%), Postives = 154/181 (85.08%), Query Frame = 0


Query: 7   EFIYPASWVGDQRLLYRAAEKSEYERSLDPPPL---TGSTMGRRHQNVNEPVVAFGPPGS 66
           EFIYP SWVGDQ LLYRAAEKSE+ERSLDPPP+     S+ GRR QN+NEP+VAFGPPGS
Sbjct: 114 EFIYPDSWVGDQTLLYRAAEKSEFERSLDPPPINKNVKSSNGRR-QNINEPIVAFGPPGS 173

Query: 67  SGELNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN 126
           +GELNVS IVSPVP DFSIEAFGGP EVGEAV+RTIT + +R D+KG+LI++ LRED L 
Sbjct: 174 TGELNVSAIVSPVPPDFSIEAFGGPKEVGEAVVRTITGSGRRPDVKGSLIESNLREDSLR 233

Query: 127 --KYYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSFCLS 183
             KYYELEF+VES SF+RHNIAVCCA  GKLYTLNAQAPES WP +KSE+ T+A+SF L+
Sbjct: 234 SIKYYELEFRVESPSFQRHNIAVCCARNGKLYTLNAQAPESVWPEVKSELYTVADSFSLT 293

[Close]

BLAST of Cla97C02G041290 vs. Swiss-Prot
Match: sp|F4J7A7|PPD7_ARATH (PsbP domain-containing protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD7 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 6.6e-64
Identity = 123/174 (70.69%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 7   EFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGE 66
           EFIYPA+WVGDQ LLYRAAEKSE E SLD PP   S    R +NVNEPVVAFGPPGS+GE
Sbjct: 107 EFIYPATWVGDQTLLYRAAEKSERENSLDLPPARNS----RRKNVNEPVVAFGPPGSTGE 166

Query: 67  LNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN--K 126
           LNVSVIVSPV   FSIEAFGGP EVGEA++RT+T + +R+DLKGTL+++++R+D     K
Sbjct: 167 LNVSVIVSPVSPSFSIEAFGGPKEVGEAIVRTVTGSGQRADLKGTLLESSIRQDSERNLK 226

Query: 127 YYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSF 179
           YYELEFKVES  FRRHN+AVCCAH G+LYTLNAQAPES W  +KSE+ T A SF
Sbjct: 227 YYELEFKVESPLFRRHNVAVCCAHSGRLYTLNAQAPESAWSEVKSEIYTTAKSF 276

[Close]

BLAST of Cla97C02G041290 vs. TAIR10
Match: AT3G05410.2 (Photosystem II reaction center PsbP family protein)

HSP 1 Score: 245.0 bits (624), Expect = 3.6e-65
Identity = 123/174 (70.69%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 7   EFIYPASWVGDQRLLYRAAEKSEYERSLDPPPLTGSTMGRRHQNVNEPVVAFGPPGSSGE 66
           EFIYPA+WVGDQ LLYRAAEKSE E SLD PP   S    R +NVNEPVVAFGPPGS+GE
Sbjct: 107 EFIYPATWVGDQTLLYRAAEKSERENSLDLPPARNS----RRKNVNEPVVAFGPPGSTGE 166

Query: 67  LNVSVIVSPVPLDFSIEAFGGPDEVGEAVIRTITRASKRSDLKGTLIQTTLREDLLN--K 126
           LNVSVIVSPV   FSIEAFGGP EVGEA++RT+T + +R+DLKGTL+++++R+D     K
Sbjct: 167 LNVSVIVSPVSPSFSIEAFGGPKEVGEAIVRTVTGSGQRADLKGTLLESSIRQDSERNLK 226

Query: 127 YYELEFKVESSSFRRHNIAVCCAHRGKLYTLNAQAPESEWPGLKSEMKTIANSF 179
           YYELEFKVES  FRRHN+AVCCAH G+LYTLNAQAPES W  +KSE+ T A SF
Sbjct: 227 YYELEFKVESPLFRRHNVAVCCAHSGRLYTLNAQAPESAWSEVKSEIYTTAKSF 276

The following BLAST results are available for this feature:

BLAST of Cla97C02G041290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454371.1	2.1e-87	90.50	PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X1 [Cucumis m...	[more]
XP_004144823.1	6.2e-87	92.61	PREDICTED: psbP domain-containing protein 7, chloroplastic [Cucumis sativus] >KG...	[more]
XP_008454379.1	5.8e-85	90.34	PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X2 [Cucumis m...	[more]
XP_022150742.1	2.2e-84	88.95	psbP domain-containing protein 7, chloroplastic isoform X1 [Momordica charantia]	[more]
XP_023537530.1	5.4e-83	87.29	psbP domain-containing protein 7, chloroplastic isoform X1 [Cucurbita pepo subsp...	[more]

BLAST of Cla97C02G041290 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E131\|A0A1S4E131_CUCME	1.4e-87	90.50	psbP domain-containing protein 7, chloroplastic isoform X1 OS=Cucumis melo OX=36...	[more]
tr\|A0A0A0LGE5\|A0A0A0LGE5_CUCSA	4.1e-87	92.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030040 PE=4 SV=1	[more]
tr\|A0A1S3BYG5\|A0A1S3BYG5_CUCME	3.8e-85	90.34	psbP domain-containing protein 7, chloroplastic isoform X2 OS=Cucumis melo OX=36...	[more]
tr\|V4TAP0\|V4TAP0_9ROSI	2.5e-68	73.22	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002020mg PE=4 ...	[more]
tr\|V4T5F4\|V4T5F4_9ROSI	1.6e-67	73.48	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002020mg PE=4 ...	[more]

BLAST of Cla97C02G041290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4J7A7\|PPD7_ARATH	6.6e-64	70.69	PsbP domain-containing protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cla97C02G041290 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05410.2	3.6e-65	70.69	Photosystem II reaction center PsbP family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0019898	extrinsic component of membrane
GO:0009654	photosystem II oxygen evolving complex
GO:0009523	photosystem II

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR002683	PsbP
IPR016123	Mog1/PsbP_a/b/a-sand

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G041290.1	Cla97C02G041290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	GENE3D	G3DSA:3.40.1000.10		coord: 3..180 e-value: 1.4E-39 score: 137.4
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	SSF55724	Mog1p/PsbP-like	coord: 7..15 coord: 45..178
IPR002683	PsbP family	PFAM	PF01789	PsbP	coord: 53..178 e-value: 3.4E-25 score: 88.9
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 7..180
None	No IPR available	PANTHER	PTHR31407:SF16	PSBP DOMAIN-CONTAINING PROTEIN 7, CHLOROPLASTIC	coord: 7..180

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G041290	Cla019913	Watermelon (97103) v1	wmwmbB316
Cla97C02G041290	Csa2G030040	Cucumber (Chinese Long) v2	cuwmbB118
Cla97C02G041290	ClCG02G015570	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G041290	CSPI02G04180	Wild cucumber (PI 183967)	cpiwmbB120
Cla97C02G041290	Cucsa.091200	Cucumber (Gy14) v1	cgywmbB100
Cla97C02G041290	CmaCh12G010680	Cucurbita maxima (Rimu)	cmawmbB175
Cla97C02G041290	CmoCh12G010820	Cucurbita moschata (Rifu)	cmowmbB161
Cla97C02G041290	Lsi11G005770	Bottle gourd (USVL1VR-Ls)	lsiwmbB087
Cla97C02G041290	CsGy2G004300	Cucumber (Gy14) v2	cgybwmbB114
Cla97C02G041290	MELO3C004233.2	Melon (DHL92) v3.6.1	medwmbB367
Cla97C02G041290	Carg17538	Silver-seed gourd	carwmbB0746
Cla97C02G041290	CsaV3_2G006520	Cucumber (Chinese Long) v3	cucwmbB123
Cla97C02G041290	Bhi06G001279	Wax gourd	wgowmbB130

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G041290	Silver-seed gourd	carwmbB0777
Cla97C02G041290	Cucurbita maxima (Rimu)	cmawmbB810
Cla97C02G041290	Cucurbita maxima (Rimu)	cmawmbB812
Cla97C02G041290	Cucurbita moschata (Rifu)	cmowmbB785
Cla97C02G041290	Cucurbita moschata (Rifu)	cmowmbB786
Cla97C02G041290	Melon (DHL92) v3.5.1	mewmbB376