Cla97C02G031040 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGAAATCCCAAAAGTACCCTTGGCCGTTAGACTTCCGTCGCAAATCGCACGGCGAGTTGCTCCATTCCAAGGCAGAGAAGCGGAAGAGCCCTGGCCGTCAGATCTCGTCGGAAACCACCCGCCGTCGCTGAGAATCGGACGGTCAGCATCGAATAATGTGACCCCACAAAATCACAAATGGAAAAAGCGTCGTTTACGGATGACGGGGCGCTCTTCCCGTTTCCAAGCTTTTCGATTCACAAAGTACGTTTCTTTTTTTTTTTTTTTAATAAATTTTTCTTCCTTATTATATATAAAAACCCTTTTTCTCCCAAATCTAGAGAGAGAAATTGGGTGATTAGGGTTTTGCAGTTGTTGGGTTTCTTTGTGAGAGAGAAGAAGAGATCGAGAAATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA ATGAGTGAAATCCCAAAAGTACCCTTGGCCGTTAGACTTCCGTCGCAAATCGCACGGCGAGTTGCTCCATTCCAAGGCAGAGAAGCGGAAGAGCCCTGGCCGTCAGATCTCGTCGGAAACCACCCGCCGTCGCTGAGAATCGGACGGTCAGCATCGAATAATGTGACCCCACAAAATCACAAATGGAAAAAGCGTCGTTTACGGATGACGGGGCGCTCTTCCCGTTTCCAAGCTTTTCGATTCACAAAAAGAAGAGATCGAGAAATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA ATGAGTGAAATCCCAAAAGTACCCTTGGCCGTTAGACTTCCGTCGCAAATCGCACGGCGAGTTGCTCCATTCCAAGGCAGAGAAGCGGAAGAGCCCTGGCCGTCAGATCTCGTCGGAAACCACCCGCCGTCGCTGAGAATCGGACGGTCAGCATCGAATAATGTGACCCCACAAAATCACAAATGGAAAAAGCGTCGTTTACGGATGACGGGGCGCTCTTCCCGTTTCCAAGCTTTTCGATTCACAAAAAGAAGAGATCGAGAAATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA MSEIPKVPLAVRLPSQIARRVAPFQGREAEEPWPSDLVGNHPPSLRIGRSASNNVTPQNHKWKKRRLRMTGRSSRFQAFRFTKRRDREMAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGGNCYSCGESGHFARECPSSGR
BLAST of Cla97C02G031040 vs. NCBI nr
Match: XP_011658593.1 (PREDICTED: glycine-rich protein 2 [Cucumis sativus] >KGN43237.1 hypothetical protein Csa_7G010300 [Cucumis sativus]) HSP 1 Score: 159.1 bits (401), Expect = 2.4e-35 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Cla97C02G031040 vs. NCBI nr
Match: XP_022952475.1 (glycine-rich protein 2-like [Cucurbita moschata]) HSP 1 Score: 151.4 bits (381), Expect = 4.9e-33 Identity = 72/79 (91.14%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Cla97C02G031040 vs. NCBI nr
Match: XP_022969511.1 (glycine-rich protein 2-like [Cucurbita maxima]) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32 Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Cla97C02G031040 vs. NCBI nr
Match: XP_023554277.1 (glycine-rich protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32 Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Cla97C02G031040 vs. NCBI nr
Match: XP_022928350.1 (glycine-rich protein 2-like [Cucurbita moschata]) HSP 1 Score: 149.8 bits (377), Expect = 1.4e-32 Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Cla97C02G031040 vs. TrEMBL
Match: tr|A0A0A0K4M5|A0A0A0K4M5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G010300 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35 Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Cla97C02G031040 vs. TrEMBL
Match: tr|A0A1S3BIY4|A0A1S3BIY4_CUCME (LOW QUALITY PROTEIN: glycine-rich protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490405 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 2.8e-29 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of Cla97C02G031040 vs. TrEMBL
Match: tr|A0A2N9HCQ1|A0A2N9HCQ1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37261 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 9.2e-28 Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of Cla97C02G031040 vs. TrEMBL
Match: tr|A0A251MYP5|A0A251MYP5_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G163000 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 2.0e-27 Identity = 61/80 (76.25%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of Cla97C02G031040 vs. TrEMBL
Match: tr|W9QKF3|W9QKF3_9ROSA (Glycine-rich protein 2b OS=Morus notabilis OX=981085 GN=L484_024979 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 5.9e-27 Identity = 62/80 (77.50%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of Cla97C02G031040 vs. Swiss-Prot
Match: sp|P27484|GRP2_NICSY (Glycine-rich protein 2 OS=Nicotiana sylvestris OX=4096 GN=GRP-2 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.8e-26 Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of Cla97C02G031040 vs. Swiss-Prot
Match: sp|Q41188|CSP2_ARATH (Cold shock protein 2 OS=Arabidopsis thaliana OX=3702 GN=CSP2 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.0e-21 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Cla97C02G031040 vs. Swiss-Prot
Match: sp|Q94C69|CSP3_ARATH (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.7e-21 Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 0
BLAST of Cla97C02G031040 vs. Swiss-Prot
Match: sp|Q38896|CSP4_ARATH (Cold shock domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=CSP4 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.7e-21 Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 0
BLAST of Cla97C02G031040 vs. Swiss-Prot
Match: sp|O65639|CSP1_ARATH (Cold shock protein 1 OS=Arabidopsis thaliana OX=3702 GN=CSP1 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.8e-18 Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 0
BLAST of Cla97C02G031040 vs. TAIR10
Match: AT4G38680.1 (glycine rich protein 2) HSP 1 Score: 105.5 bits (262), Expect = 5.6e-23 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of Cla97C02G031040 vs. TAIR10
Match: AT2G21060.1 (glycine-rich protein 2B) HSP 1 Score: 104.8 bits (260), Expect = 9.6e-23 Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 0
BLAST of Cla97C02G031040 vs. TAIR10
Match: AT2G17870.1 (cold shock domain protein 3) HSP 1 Score: 104.8 bits (260), Expect = 9.6e-23 Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 0
BLAST of Cla97C02G031040 vs. TAIR10
Match: AT4G36020.1 (cold shock domain protein 1) HSP 1 Score: 94.7 bits (234), Expect = 9.9e-20 Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |