Cla015838 (gene) Watermelon (97103) v1

Overview
NameCla015838
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCold-shock DNA binding protein (AHRD V1 *-** C1DZ42_MICSR); contains Interpro domain(s) IPR002059 Cold-shock protein, DNA-binding
LocationChr2 : 4054768 .. 4055394 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA

mRNA sequence

ATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA

Coding sequence (CDS)

ATGGCTGAAAGGGTTAGTGGGAAAGTGAAGTGGTTCAGTGACCAGAAAGGCTATGGCTTCATTTCTCCCAACGATGGAGGTGAAGATCTTTTCGTTCATCAGTCTTCCATCAGATCCGACGGTTTCCGAAGCCTCGGCGTTGGTGAGGATGTCGAGTTTCTGATCGAGGCTGAGTCCGATGGCCGTTCCAAGGCTGTTGATGTCACCGGCCCAGGAGAAGCTTCTGTGCAGGGAAGTCGCGGTGGTGGCGGCGGAGGTGGAGGAGGTGGTTACTCCAGCGGAGGAGGAGGTGGGTATGGAGGAGGAGGCGGTGGTGGAAGGGGGAGACGTGGTGGTGGTGGATATGGGTTTAACGGTGGAAGTGGCGGCGGTGGCCGAGGTGGGTACGGCGGTGGTGGAGGTGGGTATGGTGGTGGGGGTTATGGAGGAGGTGGTGGGGGCGGTGGAGGTGGTGCTTGTTTCAAGTGTGGTGAGACTGGCCATATGGCGAGGGACTGCTACCAGAGTGGATCTCAAGGCGGTGGAGATAGGTACGGCGGAGGCGGAGGCGGCGGTGGCGGTGGAAACTGCTATAGCTGTGGTGAATCTGGGCATTTCGCTAGGGAGTGTCCAAGCAGTGGTCGTTGA

Protein sequence

MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGGNCYSCGESGHFARECPSSGR
Homology
[Close]
BLAST of Cla015838 vs. Swiss-Prot
Match: GRP2_NICSY (Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 4.8e-87
Identity = 149/208 (71.63%), Postives = 159/208 (76.44%), Query Frame = 1 

Query: 3   ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGR 62
           +R  G VKWFSDQKG+GFI+P+DGGEDLFVHQS IRS+GFRSL  GE VEF +E+  DGR
Sbjct: 7   QRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVESGGDGR 66

Query: 63  SKAVDVTGPGEASVQGSRGGGGGGGG--GGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 122
           +KAVDVTGP  A+VQG RGGGGGGGG  GG   GG GGYGGGG GG    GGG  G+ GG
Sbjct: 67  TKAVDVTGPDGAAVQGGRGGGGGGGGRGGGGYGGGSGGYGGGGRGGSRGYGGGDGGYGGG 126

Query: 123 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGG 182
            G GG   YGGGGGGYGGGG  GGGG GGG  CFKCGE+GH ARDC QSG  GGG R+GG
Sbjct: 127 GGYGGGSRYGGGGGGYGGGGGYGGGGSGGGSGCFKCGESGHFARDCSQSGGGGGGGRFGG 186

Query: 183 GGGGGGGGNCYSCGESGHFARECPSSGR 209
           GGGGGGGG CY CGE GHFAREC S GR
Sbjct: 187 GGGGGGGGGCYKCGEDGHFARECTSGGR 214

[Close]
BLAST of Cla015838 vs. Swiss-Prot
Match: CSP2_ARATH (Cold shock protein 2 OS=Arabidopsis thaliana GN=CSP2 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.3e-64
Identity = 129/223 (57.85%), Postives = 144/223 (64.57%), Query Frame = 1 

Query: 3   ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGR 62
           ER  G VKWF  QKG+GFI+P+DGG+DLFVHQSSIRS+GFRSL   E VEF +E +++ R
Sbjct: 9   ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68

Query: 63  SKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSG 122
            KA+DV+GP  A VQG+ GGG        SSGG GG+GGG GGGR            GSG
Sbjct: 69  PKAIDVSGPDGAPVQGNSGGG--------SSGGRGGFGGGRGGGR------------GSG 128

Query: 123 GGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQ--------SGSQGG 182
               GGYGGGGGGYG    G GGGG GG  C+KCGE GHMARDC +         G  GG
Sbjct: 129 ----GGYGGGGGGYG----GRGGGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGGGGYGG 188

Query: 183 GDRYGGG---------GGGGGGGNCYSCGESGHFARECPSSGR 209
           G  YGGG         GGGGGGG+CYSCGESGHFAR+C S GR
Sbjct: 189 GGGYGGGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203

[Close]
BLAST of Cla015838 vs. Swiss-Prot
Match: GRP1_HORVU (Glycine-rich cell wall structural protein OS=Hordeum vulgare GN=GRP PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 77/146 (52.74%), Postives = 78/146 (53.42%), Query Frame = 1 

Query: 77  QGSRGGGGGGGGGGYSSGGGG------GYGGGGGG--GRGRRGGGGYGFNGG---SGGGG 136
           +G  GGGG GGGGGY  GGGG      GYGGGGGG  G G  GGGGYG  GG    GG G
Sbjct: 54  RGGHGGGGYGGGGGYGGGGGGYPGGGGGYGGGGGGYPGHGGEGGGGYGGGGGYPGHGGEG 113

Query: 137 RGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGG--GGG 196
            GGYGGGGG +G GG GGGG GGGGG     GE G         G  GGG  Y G  GGG
Sbjct: 114 GGGYGGGGGYHGHGGEGGGGYGGGGGYHGHGGEGG--------GGYGGGGGGYPGHGGGG 173

Query: 197 GGGGGNC-YSCGESGHFARECPSSGR 209
           G GGG C + C   G     C    R
Sbjct: 174 GHGGGRCKWGCCGHGFLHHGCRCCAR 191


HSP 2 Score: 111.7 bits (278), Expect = 9.8e-24
Identity = 71/143 (49.65%), Postives = 71/143 (49.65%), Query Frame = 1 

Query: 73  EASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGY--- 132
           EA V+    GGGG  G G    GGGGYGGGGG G    GGGGY   GG  GGG GGY   
Sbjct: 36  EAGVENFFHGGGGHHGHGRGGHGGGGYGGGGGYG---GGGGGYPGGGGGYGGGGGGYPGH 95

Query: 133 -GGGGGGY-GGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRY-------GG 192
            G GGGGY GGGGY G GG GGGG     G  G+        G  GGG  Y       GG
Sbjct: 96  GGEGGGGYGGGGGYPGHGGEGGGG---YGGGGGYHGHGGEGGGGYGGGGGYHGHGGEGGG 155

Query: 193 GGGGGGGGNCYSCGESGHFAREC 204
           G GGGGGG     G  GH    C
Sbjct: 156 GYGGGGGGYPGHGGGGGHGGGRC 172

[Close]
BLAST of Cla015838 vs. Swiss-Prot
Match: DOT1_ARATH (Glycine-rich protein DOT1 OS=Arabidopsis thaliana GN=DOT1 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-29
Identity = 70/130 (53.85%), Postives = 71/130 (54.62%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGF-----NGGSGGG 129
           G GE  + G  GGG GGG GG   GGGGG GGG GGG G  GG GYG      +GG GGG
Sbjct: 74  GHGEGHIGGGGGGGHGGGAGG---GGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGGGGGG 133

Query: 130 GRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGG 189
           G GG GGGGGG  GGGYGGG G G GG     G  GH        G  GGG   GGGGGG
Sbjct: 134 GAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGH--------GGGGGGGNGGGGGGG 192

Query: 190 GGGGNCYSCG 195
            G G  +  G
Sbjct: 194 SGEGGAHGGG 192


HSP 2 Score: 126.7 bits (317), Expect = 2.9e-28
Identity = 69/130 (53.08%), Postives = 73/130 (56.15%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRG-- 129
           GPG     G  GG G GGG GY  G  GG+GGGGGGG G  GGGG G +GG  GGG+G  
Sbjct: 99  GPGG----GYGGGSGEGGGAGYGGGEAGGHGGGGGGGAGGGGGGGGGAHGGGYGGGQGAG 158

Query: 130 ---GYGGGGGGYGGGGYGGGGGGGGGGACFKCGE------TGHMARDCYQSGSQGGGDRY 189
              GYGGGG G  GGG GGG GGGGGG   + G        G  A + Y  G+  GG   
Sbjct: 159 AGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGGAHGGGYGAGGGAGEGYGGGAGAGGHGG 218


HSP 3 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 68/125 (54.40%), Postives = 70/125 (56.00%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGY 129
           G GEA   G  GGGGGGG GG   GGGG +GGG GGG+G   GGGYG  GG+GG G GG 
Sbjct: 117 GGGEA---GGHGGGGGGGAGGGGGGGGGAHGGGYGGGQGAGAGGGYG-GGGAGGHGGGGG 176

Query: 130 GGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGGN 189
           GG GGG GGG   GG  GGG GA    GE           G  GGG    GGGGGGGGG 
Sbjct: 177 GGNGGGGGGGSGEGGAHGGGYGAGGGAGEGYGGGAGAGGHGGGGGGGGGSGGGGGGGGGY 236

Query: 190 CYSCG 195
             + G
Sbjct: 237 AAASG 237


HSP 4 Score: 122.5 bits (306), Expect = 5.5e-27
Identity = 77/160 (48.12%), Postives = 82/160 (51.25%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGG-GGGYGGG---------GGGGRGRRGGGGYGFNG 129
           G GE  + G  GGG GGG GG   GG GGGYGGG         GGG  G  GGGG G  G
Sbjct: 74  GHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGGGGGGGAG 133

Query: 130 GSGGGGRGGYGGG---------GGGYGGGGYGG-GGGGGGGGACFKCGETGHMARDCYQS 189
           G GGGG G +GGG         GGGYGGGG GG GGGGGGG      G +G         
Sbjct: 134 GGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGGSGEGGAHGGGY 193

Query: 190 GSQGG-GDRYG--------GGGGGGGGGNCYSCGESGHFA 201
           G+ GG G+ YG        GGGGGGGGG+    G  G +A
Sbjct: 194 GAGGGAGEGYGGGAGAGGHGGGGGGGGGSGGGGGGGGGYA 233


HSP 5 Score: 122.5 bits (306), Expect = 5.5e-27
Identity = 72/134 (53.73%), Postives = 73/134 (54.48%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGY 129
           G G     G  GG GG G G    GGGGG+GGG GGG G   GGGYG  GGSG GG  GY
Sbjct: 59  GSGYGGGSGEGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGGPGGGYG--GGSGEGGGAGY 118

Query: 130 GGGG----GGYGGGGYGGGGGGGGG--GACFKCGETGHMARDCYQSGSQGGGDRYGGGGG 189
           GGG     GG GGGG GGGGGGGGG  G  +  G+ G  A   Y  G  GG    GGGG 
Sbjct: 119 GGGEAGGHGGGGGGGAGGGGGGGGGAHGGGYGGGQ-GAGAGGGYGGGGAGGHGGGGGGGN 178

Query: 190 GGGGGNCYSCGESG 198
           GGGGG     GE G
Sbjct: 179 GGGGGG--GSGEGG 187


HSP 6 Score: 119.8 bits (299), Expect = 3.6e-26
Identity = 73/143 (51.05%), Postives = 73/143 (51.05%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGG-GGGYGGG---------GGGGRGRRGGGGYGFNG 129
           G GEA   G  GGGG GGGGG   G  GGGYGGG         GGGG G  GGGG G NG
Sbjct: 117 GGGEAGGHGGGGGGGAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNG 176

Query: 130 GSGGGGRG-------GYGGGGG---GYGG----GGYGGGGGGGGGGACFKCGETGHMARD 189
           G GGGG G       GYG GGG   GYGG    GG+GGGGGGGGG      G  G+ A  
Sbjct: 177 GGGGGGSGEGGAHGGGYGAGGGAGEGYGGGAGAGGHGGGGGGGGGSGGGGGGGGGYAAAS 236


HSP 7 Score: 115.2 bits (287), Expect = 8.8e-25
Identity = 75/150 (50.00%), Postives = 76/150 (50.67%), Query Frame = 1 

Query: 54  LIEAESDGRSKAVDVTGPGEASVQGSRGGGGGGGGG-GYSSGGGGGYGG------GGGGG 113
           L  +ES+    A  V     A +    GGG GGG G G  SG GGG GG      GGGGG
Sbjct: 26  LSSSESEAEVAAYGVNSGLSAGLGVGIGGGPGGGSGYGGGSGEGGGAGGHGEGHIGGGGG 85

Query: 114 RGRRGGGGYGFNGGSGGGGRGGYG-GGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARD 173
            G  GG G G  GG GGG  GG G GGG GYGGG  GG GGGGGGGA    G  G     
Sbjct: 86  GGHGGGAGGGGGGGPGGGYGGGSGEGGGAGYGGGEAGGHGGGGGGGAGGGGGGGGGAHGG 145

Query: 174 CYQSG-SQGGGDRYGGG-----GGGGGGGN 190
            Y  G   G G  YGGG     GGGGGGGN
Sbjct: 146 GYGGGQGAGAGGGYGGGGAGGHGGGGGGGN 175

[Close]
BLAST of Cla015838 vs. Swiss-Prot
Match: GRP1_PETHY (Glycine-rich cell wall structural protein 1 OS=Petunia hybrida GN=GRP-1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.7e-29
Identity = 72/134 (53.73%), Postives = 75/134 (55.97%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGGG--GGYGGGGGGGRGRRGGGGYGFNGGSGGGGRG 129
           G G  +  G  GG GGG GGG   GGG  GG G GGGGG G  GG G GF GG+GGG  G
Sbjct: 62  GRGRGAGGGFGGGAGGGAGGGLGGGGGLGGGGGAGGGGGLGGGGGAGGGFGGGAGGGAGG 121

Query: 130 GYGGGG--GGYGGGGYGGGGG-GGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGG 189
           G GGGG  GG GGGG GGGGG GGG G+    G  G +       G  GGG  +GGGGGG
Sbjct: 122 GLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGAGGGVGGGAGAGGGVGGGGGFGGGGGG 181

Query: 190 GGGGNCYSCGESGH 199
           G GG       SGH
Sbjct: 182 GVGGG------SGH 189


HSP 2 Score: 123.6 bits (309), Expect = 2.5e-27
Identity = 72/143 (50.35%), Postives = 74/143 (51.75%), Query Frame = 1 

Query: 57  AESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYG 116
           A S G   A    G G  +  G  GGGG GGGGG   GGG G+GGG G G G  GG G G
Sbjct: 147 AGSGGGFGAGGGVGGGAGAGGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGG 206

Query: 117 FNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGD 176
             GG GGGG GG GGGGG  GG G+GGG G GGG      G  G         G+ GGG 
Sbjct: 207 LGGGVGGGGGGGSGGGGGIGGGSGHGGGFGAGGGVG----GGVG--------GGAAGGGG 266

Query: 177 RYGGGGGGGGGGNCYSCGESGHF 200
             GGGGGGGGGG     G  G F
Sbjct: 267 GGGGGGGGGGGGLGGGSGHGGGF 277


HSP 3 Score: 121.3 bits (303), Expect = 1.2e-26
Identity = 70/133 (52.63%), Postives = 72/133 (54.14%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYG----FNGGSGGGG 129
           G G  +  G  GG GGG GGG   GGGGG GGGGG G G   GGG+G      GG GGG 
Sbjct: 190 GGGFGAGGGVGGGAGGGLGGGVGGGGGGGSGGGGGIGGGSGHGGGFGAGGGVGGGVGGGA 249

Query: 130 RGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGG 189
            GG GGGGGG GGGG G GGG G GG     G  G  A     +G  GGG  +GGGGGGG
Sbjct: 250 AGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGA-----AGGVGGGGGFGGGGGGG 309

Query: 190 GGGNCYSCGESGH 199
            GG       SGH
Sbjct: 310 VGGG------SGH 311


HSP 4 Score: 120.6 bits (301), Expect = 2.1e-26
Identity = 71/135 (52.59%), Postives = 72/135 (53.33%), Query Frame = 1 

Query: 72  GEASVQGSRGGGGGGG-------GGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGG 131
           G     G  GGG GGG       GGG   GGGGG GGGGG G G   GGG+G  GG GGG
Sbjct: 103 GGGGAGGGFGGGAGGGAGGGLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGAGGGVGGG 162

Query: 132 -GRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGG 191
            G GG  GGGGG+GGGG GG GGG G G  F  G  G +       G  GGG   GGGGG
Sbjct: 163 AGAGGGVGGGGGFGGGGGGGVGGGSGHGGGFGAG--GGVGGGA--GGGLGGG--VGGGGG 222

Query: 192 GGGGGNCYSCGESGH 199
           GG GG     G SGH
Sbjct: 223 GGSGGGGGIGGGSGH 231


HSP 5 Score: 119.8 bits (299), Expect = 3.6e-26
Identity = 67/131 (51.15%), Postives = 67/131 (51.15%), Query Frame = 1 

Query: 69  TGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGG 128
           +G G     GS  GGG G GGG   G GGG  GGGGGG G  GGGG G  GGSG GG  G
Sbjct: 219 SGGGGGIGGGSGHGGGFGAGGGVGGGVGGGAAGGGGGGGGGGGGGGGGLGGGSGHGGGFG 278

Query: 129 YGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGG 188
            GGG GG   GG GGGGG GGGG     G +GH        G  GG     GGGGG GGG
Sbjct: 279 AGGGVGGGAAGGVGGGGGFGGGGGGGVGGGSGHGGGFGAGGGVGGGAGGGLGGGGGAGGG 338

Query: 189 NCYSCGESGHF 200
                G  G F
Sbjct: 339 GGIGGGHGGGF 349


HSP 6 Score: 109.4 bits (272), Expect = 4.8e-23
Identity = 65/127 (51.18%), Postives = 65/127 (51.18%), Query Frame = 1 

Query: 78  GSRGGGGGGGGG-----GYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGYGGG 137
           G RG GGG  GG     G   G GGG+GGG GGG G   GGG G  GG G GG GG GGG
Sbjct: 45  GRRGCGGGRFGGRGPSFGRGRGAGGGFGGGAGGGAGGGLGGGGGLGGGGGAGGGGGLGGG 104

Query: 138 GGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGGNCYS 197
           GG   GGG+GGG GGG GG     G  G         G  GGG   GGGG GGGGG    
Sbjct: 105 GGA--GGGFGGGAGGGAGG-----GLGG--------GGGLGGG---GGGGAGGGGGVGGG 153

Query: 198 CGESGHF 200
            G  G F
Sbjct: 165 AGSGGGF 153


HSP 7 Score: 107.1 bits (266), Expect = 2.4e-22
Identity = 65/131 (49.62%), Postives = 67/131 (51.15%), Query Frame = 1 

Query: 78  GSRGGGGGGGGG-----GYSSGGGGGYGGGGGGGRGRR--GGGGYGFNGGSGGGGRGGYG 137
           G RG GGG  GG     G   G GGG+GGG GGG G    GGGG G  GG+GGGG  G G
Sbjct: 45  GRRGCGGGRFGGRGPSFGRGRGAGGGFGGGAGGGAGGGLGGGGGLGGGGGAGGGGGLGGG 104

Query: 138 GG-GGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGG-GGGGG 197
           GG GGG+GGG  GG GGG GGG     G  G         G  G G  +G GGG GGG G
Sbjct: 105 GGAGGGFGGGAGGGAGGGLGGGGGLGGGGGGGAGGGGGVGGGAGSGGGFGAGGGVGGGAG 164

Query: 198 NCYSCGESGHF 200
                G  G F
Sbjct: 165 AGGGVGGGGGF 175


HSP 8 Score: 105.9 bits (263), Expect = 5.4e-22
Identity = 67/137 (48.91%), Postives = 67/137 (48.91%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYS--SGGGGGYGGGGGGGRGRRGG--GGYGFNGGSGGGG 129
           G G A   G  GGGGGGGGGG    SG GGG+G GGG G G  GG  GG GF GG GGG 
Sbjct: 246 GGGAAGGGGGGGGGGGGGGGGLGGGSGHGGGFGAGGGVGGGAAGGVGGGGGFGGGGGGGV 305

Query: 130 RGGYG-------GG------GGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ 189
            GG G       GG      GGG GGGG  GGGGG GGG     G    +          
Sbjct: 306 GGGSGHGGGFGAGGGVGGGAGGGLGGGGGAGGGGGIGGGHGGGFGVGVGIGIGVGVGAGA 365


HSP 9 Score: 102.8 bits (255), Expect = 4.5e-21
Identity = 62/126 (49.21%), Postives = 64/126 (50.79%), Query Frame = 1 

Query: 76  VQGSRGGGGGGGGGGYSSGGGGGYGGGGGG-GRGRRGGGGYGFNGGSG-GGGRGGYGGGG 135
           ++ SR G   G G G    GGG +GG G   GRGR  GGG+G   G G GGG GG GG G
Sbjct: 31  LEESRWGNDNGCGFGRRGCGGGRFGGRGPSFGRGRGAGGGFGGGAGGGAGGGLGGGGGLG 90

Query: 136 GGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGGNCYSC 195
           GG G GG GG GGGGG G  F  G  G         G  GGG   GGGG GGGGG     
Sbjct: 91  GGGGAGGGGGLGGGGGAGGGFGGGAGGGAGGGLGGGGGLGGG---GGGGAGGGGGVGGGA 150

Query: 196 GESGHF 200
           G  G F
Sbjct: 151 GSGGGF 153

[Close]
BLAST of Cla015838 vs. TrEMBL
Match: W0RQN8_9BACT (Cold-shock protein DNA-binding protein OS=Gemmatirosa kalamazoonesis GN=J421_5232 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.9e-35
Identity = 92/186 (49.46%), Postives = 105/186 (56.45%), Query Frame = 1 

Query: 4   RVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRS 63
           R +G VKWF+ +KGYGFI+P+DGG+D FVH S+I+  GF+SL  GE VEF +        
Sbjct: 2   RTTGTVKWFNAEKGYGFIAPDDGGKDCFVHFSAIQGSGFKSLDEGERVEFEV-------- 61

Query: 64  KAVDVTGPGEASVQGSR----GGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNG 123
                 G G+   Q       GGG    GGG    GGGG  GGGGGGRG RGGG     G
Sbjct: 62  ------GQGQKGPQAENVVRLGGGTPSAGGG---AGGGGGAGGGGGGRGGRGGG----YG 121

Query: 124 GSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYG 183
           GSGGGG  G GGGGGGYGGGG GG GG GGG                 +    GGGD +G
Sbjct: 122 GSGGGGGYGGGGGGGGYGGGGGGGRGGEGGG-----------------RRERSGGGD-WG 148

Query: 184 GGGGGG 186
           GGG GG
Sbjct: 182 GGGRGG 148

[Close]
BLAST of Cla015838 vs. TrEMBL
Match: U3KB57_FICAL (Uncharacterized protein OS=Ficedula albicollis GN=DUSP8 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-34
Identity = 88/162 (54.32%), Postives = 92/162 (56.79%), Query Frame = 1 

Query: 52  EFLIEAESDGRSKAVDVTG-PGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRR 111
           E L+EA++  R K     G P     +G  GGGGGGGGGG   GGGGG GGGGGGG G  
Sbjct: 452 ELLLEAKARQRRKHRHAAGSPAHGLGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 511

Query: 112 GGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG 171
           GGGG G  GG GGGG GG GGGGGG GGGG GGGGGGGGGG     G  G         G
Sbjct: 512 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 571

Query: 172 SQGGGDRYGGGGGGGGGGNCYSCGESG----HFARECPSSGR 209
             GGG   GGGGGGGGGG     G  G      AR  P  GR
Sbjct: 572 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGLRDKARAEPRDGR 613

[Close]
BLAST of Cla015838 vs. TrEMBL
Match: U3KB57_FICAL (Uncharacterized protein OS=Ficedula albicollis GN=DUSP8 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-26
Identity = 73/152 (48.03%), Postives = 78/152 (51.32%), Query Frame = 1 

Query: 46  GVGEDVEFLIEAESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGG 105
           G G    F   A+S  R    ++    +A  +       G    G   GGGGG GGGGGG
Sbjct: 431 GSGSLSPFSPGADSPERPAGPELLLEAKARQRRKHRHAAGSPAHGLGRGGGGGGGGGGGG 490

Query: 106 GRGRRGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARD 165
           G G  GGGG G  GG GGGG GG GGGGGG GGGG GGGGGGGGGG     G  G     
Sbjct: 491 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 550

Query: 166 CYQSGSQGGGDRYGGGGGGGGGGNCYSCGESG 198
               G  GGG   GGGGGGGGGG     G  G
Sbjct: 551 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 582


HSP 2 Score: 151.8 bits (382), Expect = 9.5e-34
Identity = 80/148 (54.05%), Postives = 86/148 (58.11%), Query Frame = 1 

Query: 50  DVEFLIEAESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGR 109
           D  F+I+++ +  +   D    G     G  GGGGGGGGGG   GGGGG GGGGGGG G 
Sbjct: 7   DRSFIIDSDDEDDAGVEDGKRRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 66

Query: 110 RGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQS 169
            GGGG G  GG GGGG GG GGGGGG GGGG GGGGGGGGGG     G  G         
Sbjct: 67  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 126

Query: 170 GSQGGGDRYGGGGGGGGGGNCYSCGESG 198
           G  GGG   GGGGGGGGGG     G  G
Sbjct: 127 GGGGGGGGGGGGGGGGGGGGGGGGGGGG 154

[Close]
BLAST of Cla015838 vs. TrEMBL
Match: J3LVY5_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.7e-33
Identity = 77/136 (56.62%), Postives = 79/136 (58.09%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGY 129
           G G     G  GGGGGGGGGG   GGGGG GGGGGGG G  GGGG G  GG GGGG GG 
Sbjct: 37  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 96

Query: 130 GGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGGN 189
           GGGGGG GGGG GGGGGGGGGG     G  G         G  GGG   GGGGGGGGGG 
Sbjct: 97  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 156

Query: 190 CYSCGESGHFARECPS 206
                    ++  C S
Sbjct: 157 GDESDNGSDYSSSCGS 172


HSP 2 Score: 60.1 bits (144), Expect = 3.8e-06
Identity = 36/76 (47.37%), Postives = 36/76 (47.37%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNG----GSGGGG 129
           G G     G  GGGGGGGGGG   GGGGG GGGGGGG    GGG    NG     S G  
Sbjct: 118 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----GGGDESDNGSDYSSSCGSP 177

Query: 130 RGGYGGGGGGYGGGGY 142
           R       GG     Y
Sbjct: 178 RVTVAAAAGGSQPSSY 189


HSP 3 Score: 151.8 bits (382), Expect = 9.5e-34
Identity = 80/147 (54.42%), Postives = 86/147 (58.50%), Query Frame = 1 

Query: 42  FRSLGVGEDVEFLIEAESDGRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGG 101
           +R L  GE+     +   +     V  +G  + S  G  GGGGGGGGGG   GGGGG GG
Sbjct: 485 YRKLLEGEESRLAGDGVGNVNISVVSSSGSSKVSSGGGGGGGGGGGGGGGGGGGGGGGGG 544

Query: 102 GGGGGRGRRGGGGYGFNGGSGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGH 161
           GGGGG G  GGGG G  GG GGGG GG GGGGGG GGGG GGGGGGGGGG     G  G 
Sbjct: 545 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG- 604

Query: 162 MARDCYQSGSQGGGDRYGGGGGGGGGG 189
                   G  GGG   GGGGGGGGGG
Sbjct: 605 -------GGGGGGGGGGGGGGGGGGGG 623

[Close]
BLAST of Cla015838 vs. TrEMBL
Match: U3JPW5_FICAL (Uncharacterized protein OS=Ficedula albicollis GN=KRT7 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-24
Identity = 71/129 (55.04%), Postives = 76/129 (58.91%), Query Frame = 1 

Query: 71  PGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGYG 130
           PG +  +G  GGGGGGGGGG   GGGGG GGGGGGG    GGGG    GG GGGGRGG G
Sbjct: 40  PGVSCPRGGGGGGGGGGGGG---GGGGGGGGGGGGG----GGGG---GGGGGGGGRGGGG 99

Query: 131 GGGGGYGGGGYGGGGGGG-GGGACFKCGETGHMARDCYQSGSQ-GGGDRYGGGGGGGGGG 190
           GGGGG GGGG GGGGGGG G  + +  G  G   R     GS  GGG  +G   G G G 
Sbjct: 100 GGGGGGGGGGGGGGGGGGFGSASLYSLGSAG--KRISLGGGSSLGGGSAFGVRSGYGYGY 156

Query: 191 NCYSCGESG 198
                G SG
Sbjct: 160 GAAGLGGSG 156


HSP 2 Score: 151.4 bits (381), Expect = 1.2e-33
Identity = 80/139 (57.55%), Postives = 82/139 (58.99%), Query Frame = 1 

Query: 70  GPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSGGGGRGGY 129
           G G     G  GGGGGGGGGG   GGGGG GGGGGGG G  GGGG G  GG GGGG GG 
Sbjct: 20  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 79

Query: 130 GGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGGGGGGN 189
           GGGGGG GGGG GGGGGGGGGG     G  G         G  GGG   GGGGGGGGGG 
Sbjct: 80  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 139

Query: 190 CYSCGESGHFARECPSSGR 209
               G  G  +  C S G+
Sbjct: 140 GGGGGGGGGRSGGCRSVGK 158

[Close]
BLAST of Cla015838 vs. NCBI nr
Match: gi|565387789|ref|XP_006359670.1| (PREDICTED: glycine-rich protein 2-like [Solanum tuberosum])

HSP 1 Score: 290.8 bits (743), Expect = 1.9e-75
Identity = 141/206 (68.45%), Postives = 155/206 (75.24%), Query Frame = 1 

Query: 3   ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGR 62
           ER++G VKWFSDQKG+GFI+P+DG EDLFVHQS IRS+GFRSL  GE+VE+ IE+ SDGR
Sbjct: 7   ERLTGIVKWFSDQKGFGFITPSDGSEDLFVHQSGIRSEGFRSLAEGEEVEYQIESGSDGR 66

Query: 63  SKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSG 122
           +KA DVTGP  A V+G    GGGGGGG      GGGYGGG GG RG  GGG  G+     
Sbjct: 67  AKACDVTGPDGAPVKGGSRSGGGGGGG----RDGGGYGGGRGGSRG-YGGGDSGY----- 126

Query: 123 GGGRGGYGGGGGGYGGGGYG-GGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGG 182
           GGG  GYGGGGGGYGGGG G GGGGGG GG CFKCGE+GH AR+C Q G  GGG   GGG
Sbjct: 127 GGGSRGYGGGGGGYGGGGGGYGGGGGGSGGGCFKCGESGHFARECPQDGGSGGGGGGGGG 186

Query: 183 GGGGGGGNCYSCGESGHFARECPSSG 208
           GGGGGGG CY CGE GHFAREC S G
Sbjct: 187 GGGGGGGGCYKCGEEGHFARECTSGG 202

[Close]
BLAST of Cla015838 vs. NCBI nr
Match: gi|460370353|ref|XP_004231017.1| (PREDICTED: glycine-rich protein 2-like [Solanum lycopersicum])

HSP 1 Score: 290.4 bits (742), Expect = 2.5e-75
Identity = 146/217 (67.28%), Postives = 157/217 (72.35%), Query Frame = 1 

Query: 3   ERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGR 62
           ER+ G VKWFSDQKG+GFI+P DG EDLFVHQS IRS+GFRSL  GEDVE+ IE+ SDGR
Sbjct: 7   ERLKGTVKWFSDQKGFGFITPADGSEDLFVHQSGIRSEGFRSLAEGEDVEYQIESGSDGR 66

Query: 63  SKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGGSG 122
           +KA DVTGP EA+V+G    GGG  GGGY  GGGGGYGGGGG G GR G  GYG      
Sbjct: 67  AKASDVTGPNEAAVKGGSRSGGGRDGGGY--GGGGGYGGGGGYGGGRGGNRGYG------ 126

Query: 123 GGGRGGYGGG---GGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQ--GGGDR 182
            GG  GYGGG   GGGYGGGG G GGGGGGGG CFKCGE+GH AR+C Q G    GGG R
Sbjct: 127 -GGDSGYGGGSRGGGGYGGGG-GYGGGGGGGGGCFKCGESGHFARECPQDGGSGGGGGGR 186

Query: 183 YGG-------GGGGGGGGNCYSCGESGHFARECPSSG 208
           Y G       GGGGGGGG CY CGE GHFAREC S G
Sbjct: 187 YSGGGGGRYSGGGGGGGGGCYKCGEEGHFARECTSGG 213

[Close]
BLAST of Cla015838 vs. NCBI nr
Match: gi|116781927|gb|ABK22299.1| (unknown [Picea sitchensis])

HSP 1 Score: 288.1 bits (736), Expect = 1.2e-74
Identity = 137/201 (68.16%), Postives = 155/201 (77.11%), Query Frame = 1 

Query: 6   SGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESDGRSKA 65
           SGKVKWF   KGYGFI+P+DG EDLFVHQ+SI S+GFRSL  GE VE+ +E E+ GR+KA
Sbjct: 7   SGKVKWFDSTKGYGFITPDDGSEDLFVHQTSIHSNGFRSLAEGEAVEYTVEHENGGRTKA 66

Query: 66  VDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNG-GSGGG 125
           +DVTGP  A VQG+ GGGGGG GGG   GGGGGYGGGGGG  G  GGGGYG  G G GGG
Sbjct: 67  LDVTGPDGAFVQGNSGGGGGGRGGG-RGGGGGGYGGGGGGYGG--GGGGYGGGGYGGGGG 126

Query: 126 GRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSGSQGGGDRYGGGGGG 185
             GG GGG GG  GGG GGG GGGGGG+C+KCGE+GH ARDC   G  GGG+  GGGGGG
Sbjct: 127 WNGGGGGGRGGGRGGGRGGGAGGGGGGSCYKCGESGHFARDCTSGGGGGGGN--GGGGGG 186

Query: 186 GGGGNCYSCGESGHFARECPS 206
            GGG+CY CG+ GHFAR+CP+
Sbjct: 187 AGGGSCYQCGDFGHFARDCPN 202

[Close]
BLAST of Cla015838 vs. NCBI nr
Match: gi|356538622|ref|XP_003537800.1| (PREDICTED: cold shock protein 2-like [Glycine max])

HSP 1 Score: 285.0 bits (728), Expect = 1.0e-73
Identity = 145/224 (64.73%), Postives = 160/224 (71.43%), Query Frame = 1 

Query: 1   MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           M+ RVSGKVKWF+DQKG+GFI+P+DG E+LFVHQS I+SDGFRSL  GE VEF IE+ESD
Sbjct: 1   MSGRVSGKVKWFNDQKGFGFITPDDGSEELFVHQSQIKSDGFRSLAEGESVEFAIESESD 60

Query: 61  GRSKAVDVTGPGEASVQGSRGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRGGGGYGFNGG 120
           GR+KAVDVTGP  ASVQG+R GG           GG  YGGG GG     GGGGY     
Sbjct: 61  GRAKAVDVTGPDGASVQGTRRGG----------DGGRSYGGGRGG-----GGGGY----- 120

Query: 121 SGGGGRGGYGGGGGGYGGGGYGGGGGGGGGGACFKCGETGHMARDCYQSG---------- 180
              GG GGYGGGGG  GGGGYGGGG GGGGGAC+ CGE+GH+ARDC Q G          
Sbjct: 121 ---GGGGGYGGGGGYGGGGGYGGGGRGGGGGACYNCGESGHLARDCSQGGGGDRYGGGGG 180

Query: 181 -----SQGGGDRY-GGGGGGGGGGNCYSCGESGHFARECPSSGR 209
                  GGG RY GGGGGGGGGG+CYSCGESGHFAR+CPSS R
Sbjct: 181 GGGRYGGGGGGRYGGGGGGGGGGGSCYSCGESGHFARDCPSSAR 201

[Close]
BLAST of Cla015838 vs. NCBI nr
Match: gi|326523669|dbj|BAJ93005.1| (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 261.2 bits (666), Expect = 1.6e-66
Identity = 135/230 (58.70%), Postives = 152/230 (66.09%), Query Frame = 1 

Query: 1   MAERVSGKVKWFSDQKGYGFISPNDGGEDLFVHQSSIRSDGFRSLGVGEDVEFLIEAESD 60
           M  RV G VKWF+  KG+GFISP DG EDLFVHQS+I+SDG+RSL   + VEF +    D
Sbjct: 1   MGARVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDVVEFDVITGDD 60

Query: 61  GRSKAVDVTGPGEASVQGS---------RGGGGGGGGGGYSSGGGGGYGGGGGGGRGRRG 120
           GR+KA DVT PG  ++ G          RGG GGGGGGG   GGGGGYGGGGGG  G  G
Sbjct: 61  GRTKASDVTAPGGGALSGGSRPSDGGGGRGGYGGGGGGGGYGGGGGGYGGGGGGYGGGGG 120

Query: 121 GGGYGFNGGSGGGGRGGYGGGGGGY--------GGGGYGGGGGGGGGGACFKCGETGHMA 180
           G G G  GG GGGGRG Y  G  G+        GGGGY  GGGGGGG  C+KCGE GH++
Sbjct: 121 GYGGGGYGGGGGGGRGCYKCGEEGHISRDCPQGGGGGY--GGGGGGGRECYKCGEEGHIS 180

Query: 181 RDCYQSGSQG---GGDRYG-----GGGGGGGGGNCYSCGESGHFARECPS 206
           RDC Q G  G   GG  YG     GGGGGGGGG C+SCGESGHF+RECP+
Sbjct: 181 RDCPQGGGGGGGYGGGGYGGGGGRGGGGGGGGGGCFSCGESGHFSRECPN 228

The following BLAST results are available for this feature:
BLAST of Cla015838 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GRP2_NICSY4.8e-8771.63Glycine-rich protein 2 OS=Nicotiana sylvestris GN=GRP-2 PE=2 SV=1[more]
CSP2_ARATH4.3e-6457.85Cold shock protein 2 OS=Arabidopsis thaliana GN=CSP2 PE=1 SV=1[more]
GRP1_HORVU1.6e-2952.74Glycine-rich cell wall structural protein OS=Hordeum vulgare GN=GRP PE=2 SV=1[more]
DOT1_ARATH3.5e-2953.85Glycine-rich protein DOT1 OS=Arabidopsis thaliana GN=DOT1 PE=2 SV=1[more]
GRP1_PETHY7.7e-2953.73Glycine-rich cell wall structural protein 1 OS=Petunia hybrida GN=GRP-1 PE=1 SV=... [more]
BLAST of Cla015838 vs. TrEMBL
Match NameE-valueIdentityDescription
W0RQN8_9BACT2.9e-3549.46Cold-shock protein DNA-binding protein OS=Gemmatirosa kalamazoonesis GN=J421_523... [more]
U3KB57_FICAL1.5e-3454.32Uncharacterized protein OS=Ficedula albicollis GN=DUSP8 PE=4 SV=1[more]
U3KB57_FICAL2.5e-2648.03Uncharacterized protein OS=Ficedula albicollis GN=DUSP8 PE=4 SV=1[more]
J3LVY5_ORYBR4.7e-3356.62Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
U3JPW5_FICAL2.3e-2455.04Uncharacterized protein OS=Ficedula albicollis GN=KRT7 PE=3 SV=1[more]
BLAST of Cla015838 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|565387789|ref|XP_006359670.1|1.9e-7568.45PREDICTED: glycine-rich protein 2-like [Solanum tuberosum][more]
gi|460370353|ref|XP_004231017.1|2.5e-7567.28PREDICTED: glycine-rich protein 2-like [Solanum lycopersicum][more]
gi|116781927|gb|ABK22299.1|1.2e-7468.16unknown [Picea sitchensis][more]
gi|356538622|ref|XP_003537800.1|1.0e-7364.73PREDICTED: cold shock protein 2-like [Glycine max][more]
gi|326523669|dbj|BAJ93005.1|1.6e-6658.70predicted protein [Hordeum vulgare subsp. vulgare][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR002059CSP_DNA-bd
IPR011129CSD
IPR012340NA-bd_OB-fold
IPR019844Cold-shock_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU14028watermelon EST collection version 2.0transcribed_cluster
WMU15159watermelon EST collection version 2.0transcribed_cluster
WMU45308watermelon EST collection version 2.0transcribed_cluster
WMU78769watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla015838Cla015838.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU15159WMU15159transcribed_cluster
WMU45308WMU45308transcribed_cluster
WMU14028WMU14028transcribed_cluster
WMU78769WMU78769transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 153..205
score: 1.5
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 152..166
score: 2.3E-7coord: 189..205
score: 1.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 152..168
score: 1.4E-5coord: 189..205
score: 2.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 153..166
score: 11.054coord: 190..205
score: 11
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 143..206
score: 2.53
IPR002059Cold-shock protein, DNA-bindingPRINTSPR00050COLDSHOCKcoord: 28..37
score: 2.7E-12coord: 43..61
score: 2.7E-12coord: 7..22
score: 2.7
IPR002059Cold-shock protein, DNA-bindingPFAMPF00313CSDcoord: 6..70
score: 1.3
IPR011129Cold shock proteinSMARTSM00357csp_8coord: 6..71
score: 6.1
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 5..69
score: 6.3
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 2..70
score: 3.0
IPR019844Cold-shock conserved sitePROSITEPS00352COLD_SHOCKcoord: 18..37
scor
NoneNo IPR availablePANTHERPTHR11544COLD SHOCK DOMAIN CONTAINING PROTEINScoord: 1..114
score: 6.8E-82coord: 140..208
score: 6.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla015838Cla97C02G031040Watermelon (97103) v2wmwmbB317
Cla015838Csa7G010300Cucumber (Chinese Long) v2cuwmB604
Cla015838MELO3C013368Melon (DHL92) v3.5.1mewmB239
Cla015838ClCG02G004220Watermelon (Charleston Gray)wcgwmB198
Cla015838CSPI07G00860Wild cucumber (PI 183967)cpiwmB622
Cla015838Cucsa.381750Cucumber (Gy14) v1cgywmB688
Cla015838CmaCh19G007310Cucurbita maxima (Rimu)cmawmB503
Cla015838CmoCh19G007390Cucurbita moschata (Rifu)cmowmB496
Cla015838CmoCh11G017340Cucurbita moschata (Rifu)cmowmB116
Cla015838Lsi11G011910Bottle gourd (USVL1VR-Ls)lsiwmB106
Cla015838Cp4.1LG15g05730Cucurbita pepo (Zucchini)cpewmB268
Cla015838Cp4.1LG04g04930Cucurbita pepo (Zucchini)cpewmB674
Cla015838CsGy7G000700Cucumber (Gy14) v2cgybwmB566
Cla015838MELO3C013368.2Melon (DHL92) v3.6.1medwmB231
Cla015838Carg19359Silver-seed gourdcarwmB0305
Cla015838Carg05702Silver-seed gourdcarwmB1024
Cla015838CsaV3_7G000900Cucumber (Chinese Long) v3cucwmB634
Cla015838Bhi05G001487Wax gourdwgowmB272
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla015838Cucumber (Chinese Long) v3cucwmB160
Cla015838Cucumber (Chinese Long) v3cucwmB163
Cla015838Watermelon (97103) v2wmwmbB327
Cla015838Watermelon (97103) v2wmwmbB349
Cla015838Wax gourdwgowmB383
Cla015838Watermelon (97103) v1wmwmB073
Cla015838Watermelon (97103) v1wmwmB159
Cla015838Cucumber (Gy14) v1cgywmB296
Cla015838Cucumber (Gy14) v1cgywmB321
Cla015838Cucurbita maxima (Rimu)cmawmB121
Cla015838Cucurbita maxima (Rimu)cmawmB526
Cla015838Cucurbita maxima (Rimu)cmawmB586
Cla015838Cucurbita moschata (Rifu)cmowmB117
Cla015838Cucurbita moschata (Rifu)cmowmB158
Cla015838Cucurbita moschata (Rifu)cmowmB514
Cla015838Cucurbita moschata (Rifu)cmowmB580
Cla015838Melon (DHL92) v3.5.1mewmB112
Cla015838Melon (DHL92) v3.5.1mewmB327
Cla015838Watermelon (Charleston Gray)wcgwmB209
Cla015838Watermelon (Charleston Gray)wcgwmB422
Cla015838Cucumber (Chinese Long) v2cuwmB150
Cla015838Cucumber (Chinese Long) v2cuwmB153
Cla015838Cucurbita pepo (Zucchini)cpewmB115
Cla015838Cucurbita pepo (Zucchini)cpewmB304
Cla015838Cucurbita pepo (Zucchini)cpewmB673
Cla015838Cucurbita pepo (Zucchini)cpewmB748
Cla015838Cucurbita pepo (Zucchini)cpewmB808
Cla015838Bottle gourd (USVL1VR-Ls)lsiwmB079
Cla015838Cucumber (Gy14) v2cgybwmB141
Cla015838Cucumber (Gy14) v2cgybwmB144
Cla015838Melon (DHL92) v3.6.1medwmB110
Cla015838Melon (DHL92) v3.6.1medwmB324
Cla015838Silver-seed gourdcarwmB0137
Cla015838Silver-seed gourdcarwmB0335
Cla015838Silver-seed gourdcarwmB0985
Cla015838Silver-seed gourdcarwmB1025