Cla97C02G026210 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAATGGCCACTCTCACCTCTTCTATGCAGGCCAATCTCCTTTCCCATCACTCCTTATCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATTTCTTTCTTTCCAGCTTCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATACTTCTGCTTTCTTCAACTCCTGCAAGAGCTTTGGAACCATTGAGACTCCATCCCGCAGCCGTCATGCCTCAAACTCTTTCAATGTTCGGATGTCCTGGGACGGCCACCTCTCCTCTGTCAAATTAATTGTCCAAGGGAAAAATTTGGAGGTATTTCATTTAGCTTCATCTTTGCTATTGTTTCTCATGCAATGCGACTTCTTCTTTTCACTATCTTGAATTGTTAATTCTTCCCATGTTTGATTCAGTAATTACTATCAAATGAATCCACATAACCTCTAACTTTTTCATACCCCATTCTCTATGCTATTTCAATCACCATATCCCTTTACTCAAACCCTACCCTTGTATTTGCTGACTTCTCCATTTCCACTACATTTAGTTTACAAACCCTAAACTCTGCCTCATTTCTTTAAATATTTTCCGTATCAACATTCGTGGCCCTTCTCCATTCTTCTTTTTACTCTGCACACCTCTTTGAAGTGAACGCATCGCATAAGGAATTCACTATCATTTTCAAAAACTCCTCCCTCCATCTCCTAATCTCTCAGCGAATTTTGATATTGATATTCTATATCTTCGCTTATTGCAGCTAGAAGATTGTTCCTTGGTCAAAGAATCAGGGTGCATTCACTCTCTTCAATATCAGCATCTAAACCAAATTTATTCTTCTCTACATTCTCATCAAACACAACCATTTTTCCTTCATAATCATTCCATTCCAGGAAACGCACGATGGCTACTTCATACTTCCCAATTTCAACCGTTATCTGCTTGAAGGAATCCTTTGTAAAATTGGATCAAGATATCTGTAGGCCCCTGTTTCTTTCACTTAATACAAGACACACAACTCAAGCTTTATCATCCTGCTTAGATCTTGAACATGATACACGCATCAAAAGCAGTCAACACATGTAATAAAAGACTGCTGCCTCGTTATGGAAATATTAGAGTTATTAGTATGGTTATTAGAAGGGCATATTAGTAATTAGTTAGTAAGTTTGTTAGAGCTTTTAGTTATAAATAGAGAGAGTTGGTTGGGAGCAAGGTGTGGATCATTTTGGTAGTAATTTCCTTTGTGGGAATTTAAGTGGGTGTAACCCTCTCGAAAGGAAAGGCTATGATATTGTAGTTTCTTCATTCATCTTGCAATATAATTCTATCTTTTTGTGTTTGTTGTTCTTCAATGTTCATGCTAGCTGATAACCCAACTACACCCTAATCTAGATGATACGGATTTGACACCAAATATTAGGAATAAGCTCTTCAAAGAAATAAAAGCAGGAGAAATATACTGTTAAAAACATGCTGGAAATGATAACAAAGTTTAATAAGGTGGTCATCATACTGAACTTACCTACTAGATGCAGATAAAGAAATTACCTACTAACACTTATAAACAAGCTACCTTAGTTGTAGAAACTCTGCTGCTGCAAAATGACAAGACCACCTACTAACTAGAAATTCTAACATGTACTTCTAGAAGTTGTCCGAGTTTCAGTTACCCAATTTATGGTATCTCAATGTTTCAAATGTCAAACATTGAGTGGATTGAGGGTTTTGACTTTAGTTTGGGAGAAGGGATGTTCGTGTTTGGAGTCCTAACCCATTGGAGGGTTTCTCTTGTACGTCGTTCTTTAGGATTTTATTAGATCCTTCTCTTGTTGTTGAGTCGGTCTTTGATGTTTTATGGAGGATTAAGATTCCAAAGAAAGTTAAGTTCTTTTCCTAGCAAGTTTTGCTTGGTCGTGTGAATACGATGGATACGATTTTGAGAAAGATGTCTTCGTTAATGGGTCTATTTTGTTGTATTTTTTGTCGGAAGATGGAGGAAACCTAGATCACCTTCTTGGAGTGTCAGTTTGCGAGATCTGTTTGGAACGGTTTCTTGCAAGAGTTTGATTTTAATCTTGCTCACCGGTTGATAATTGGGGAGTTCCTTCTCCATCCGTCTTTCAAAGAGAAAGGTCATTTTCTTTGATTTGTGGGGGTGTGTGTTTTGTGGGATCTTTGGGAGGAGAGAAACAATAGAGTGTTTCGGGTTGTGGAGGGACCCTAGCAAGGTTTGGTCTTTATTGAGGTTTCATGTTTCTCTTTGGGCTTCGGTTTTGAAGGCTTTTTGTTATCACTCTCTAGTCAATATCTTACCTAGATGGAAACACTTTCTTTAGTTGGAGATTTTTTTTTGTGTGAGTTTTCTTTTTTTGTATGCCCTTGCATTCTTTCCTTTTTTTTCCTCAATGAAATAGTTGTTTCTGTATTTTTTTTAAAAAAATACAATAATACAAAAAGAAAAAAATACAAAAATAAAAATAAAATAAAATAAAGAAAAAACATTGAGTTGATTTATGTTTAATTGTGCAAAAAACTAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATAAGAAGATGTGAGGTACTCTATTGCTCCTTTATTTTAAATTTATCCATATGAATTGAACCCTCATTCGTTTCCAAAAACATTTGTGTTTATATAGGTTACTTTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCCGAGACCGTCTATGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCATGGCCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTAGTTGGAGATGAGGATGAGGAAGTTTTTCAAGAAGATGGTGGAGAAGTTATTGATGAGGTTATTCTTCCAACCTTTGGGTTTTTACTTTGAGTTCATTTAAGGTGATATTAGCTTATAAAAGCTCATGTATGCCATGCCTTATGCCATGCCTGTTAATTATTTTCTACATGTCGAAGCTTATTATGAAACTTACTAAACCACATCTTTCCTCACTTAGTTATTGAAAACATTGTTTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACCATCAATTAGTAGTGGGAAAACTCCAGATGCAGTACTCAGATTAGTTGAACCATGTGCAATAAGTTACTCCTCGCATAGGTGGGAAGAACGGAAAGAAATGCATTCTCAATCTTGATTACCCCCCTCTGATGTGCTATTCTCAACTGAGTTCAGCTCAAAGTCCTATTTTTATTTACATTATAGGATTAATAAGTCAGTTCTTTTATTTCACAACATGACATCTTAGATAAACATGAAAAAATCGGAAGTTGGACCTGACAACTGTAAGATAGAGGGCCTCCATAGTTTGTAGGAGTCTGTTATCTGTTATTTCTCACAGAGCTAACATTGTGTTGACTGTTATTTTATTGATCCTTTGCTCCTCATGAGTGTTTTGTGGTCCATTCCAATGTACTTGATCGTTATAGCTTTTGATTTACTTGCTGCTTATTTTGTTTACATTCAATTTTGGTTGGAAGGACTTATGATATTCGTCCTTTTTAGATAACGATCATGTATTATACATATTCTGGAAGCTCGTGAATGATATGTACACATGATTAAAATATTAATTTTTCCTTTTCATGCTAGCAATTTTTTATTTTGGTATCTCATTGCTCATTTTTATCTTGATTTCAGATTGTTCGGACAAAATACTTCGATATGCCACCTTTGACAGTTGAAGAAGCAATTGAACAACTCAAAAATATTGACCATGATTTCTATGGTTTTCGGAATGAAGAAACTGGTGCGTTGATTTGATTATTATGATGATCTTGCTTTGTTGGGATTCTTTGCTGTTTATATCGTAGCTTATTGTCTGAATCTTTGGCCCAGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCAAAGCTGAGAAATTAGAACCTGTCACAGTTGAAGCAGCCAGAGAACCATCCTTAGCGGAATGA ATGGTAATGGCCACTCTCACCTCTTCTATGCAGGCCAATCTCCTTTCCCATCACTCCTTATCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATTTCTTTCTTTCCAGCTTCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATACTTCTGCTTTCTTCAACTCCTGCAAGAGCTTTGGAACCATTGAGACTCCATCCCGCAGCCGTCATGCCTCAAACTCTTTCAATGTTCGGATGTCCTGGGACGGCCACCTCTCCTCTGTCAAATTAATTGTCCAAGGGAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATAAGAAGATGTGAGGTTACTTTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCCGAGACCGTCTATGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCATGGCCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTAGTTGGAGATGAGGATGAGGAAGTTTTTCAAGAAGATGGTGGAGAAGTTATTGATGAGATTGTTCGGACAAAATACTTCGATATGCCACCTTTGACAGTTGAAGAAGCAATTGAACAACTCAAAAATATTGACCATGATTTCTATGGTTTTCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCAAAGCTGAGAAATTAGAACCTGTCACAGTTGAAGCAGCCAGAGAACCATCCTTAGCGGAATGA ATGGTAATGGCCACTCTCACCTCTTCTATGCAGGCCAATCTCCTTTCCCATCACTCCTTATCTTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATTTCTTTCTTTCCAGCTTCCTTCTCTCTTCACTTCTCTGCGCTCAAAGTTCATGCTCTTTCTTCCAATACTTCTGCTTTCTTCAACTCCTGCAAGAGCTTTGGAACCATTGAGACTCCATCCCGCAGCCGTCATGCCTCAAACTCTTTCAATGTTCGGATGTCCTGGGACGGCCACCTCTCCTCTGTCAAATTAATTGTCCAAGGGAAAAATTTGGAGTTGACTGAAGCAGTTAAGAAGCATGTGGAAGAGAAGGTTGGCAAGGCAGTCCAGAAGCACAGTCACTTAGTGAGAGAAGTAGATGTCAGGCTTTCAGTTAGAGGTGGGGAGTTTGGGAAGGGTCCAAGGATAAGAAGATGTGAGGTTACTTTATTCACAAAGAAGCATGGAGTTGTACGGGCAGAGGAAGATGCCGAGACCGTCTATGCAAGCATTGATTTGGTATCCTCCATCATACAGAGGAAGTTGAGAAAGATTAAAGAGAAAGATTCAGACCATGGCCGACACATGAAAGGATTTGACAGATTGAAAGTAAGAGAACCTGCACCAATAGTAGTTGGAGATGAGGATGAGGAAGTTTTTCAAGAAGATGGTGGAGAAGTTATTGATGAGATTGTTCGGACAAAATACTTCGATATGCCACCTTTGACAGTTGAAGAAGCAATTGAACAACTCAAAAATATTGACCATGATTTCTATGGTTTTCGGAATGAAGAAACTGGTGAGATTAACATCTTATATAAAAGAAAGGATGGAGGATATGGACTTATTATCCCAAAAGAAAATGGCAAAGCTGAGAAATTAGAACCTGTCACAGTTGAAGCAGCCAGAGAACCATCCTTAGCGGAATGA MVMATLTSSMQANLLSHHSLSSSTSSSSSSSSSSSSSISFFPASFSLHFSALKVHALSSNTSAFFNSCKSFGTIETPSRSRHASNSFNVRMSWDGHLSSVKLIVQGKNLELTEAVKKHVEEKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVREPAPIVVGDEDEEVFQEDGGEVIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPKENGKAEKLEPVTVEAAREPSLAE
BLAST of Cla97C02G026210 vs. NCBI nr
Match: XP_008460813.1 (PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis melo]) HSP 1 Score: 528.9 bits (1361), Expect = 1.2e-146 Identity = 278/318 (87.42%), Postives = 286/318 (89.94%), Query Frame = 0
BLAST of Cla97C02G026210 vs. NCBI nr
Match: XP_004147328.1 (PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Cucumis sativus]) HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146 Identity = 277/318 (87.11%), Postives = 286/318 (89.94%), Query Frame = 0
BLAST of Cla97C02G026210 vs. NCBI nr
Match: XP_023551717.1 (ribosome-binding factor PSRP1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 478.4 bits (1230), Expect = 1.9e-131 Identity = 258/323 (79.88%), Postives = 270/323 (83.59%), Query Frame = 0
BLAST of Cla97C02G026210 vs. NCBI nr
Match: XP_022141073.1 (ribosome-binding factor PSRP1, chloroplastic [Momordica charantia]) HSP 1 Score: 476.9 bits (1226), Expect = 5.5e-131 Identity = 260/324 (80.25%), Postives = 268/324 (82.72%), Query Frame = 0
BLAST of Cla97C02G026210 vs. NCBI nr
Match: XP_022922607.1 (ribosome-binding factor PSRP1, chloroplastic [Cucurbita moschata]) HSP 1 Score: 474.9 bits (1221), Expect = 2.1e-130 Identity = 268/319 (84.01%), Postives = 279/319 (87.46%), Query Frame = 0
BLAST of Cla97C02G026210 vs. TrEMBL
Match: tr|A0A1S3CCT7|A0A1S3CCT7_CUCME (ribosome-binding factor PSRP1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499579 PE=3 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 8.1e-147 Identity = 278/318 (87.42%), Postives = 286/318 (89.94%), Query Frame = 0
BLAST of Cla97C02G026210 vs. TrEMBL
Match: tr|A0A2C9VZB4|A0A2C9VZB4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G197600 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.5e-105 Identity = 205/276 (74.28%), Postives = 230/276 (83.33%), Query Frame = 0
BLAST of Cla97C02G026210 vs. TrEMBL
Match: tr|B9SEK8|B9SEK8_RICCO (Plastid-specific 30S ribosomal protein 1, chloroplast, putative OS=Ricinus communis OX=3988 GN=RCOM_0969810 PE=3 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 1.3e-104 Identity = 204/268 (76.12%), Postives = 227/268 (84.70%), Query Frame = 0
BLAST of Cla97C02G026210 vs. TrEMBL
Match: tr|A0A067LAT5|A0A067LAT5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_17075 PE=3 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 3.8e-104 Identity = 199/269 (73.98%), Postives = 223/269 (82.90%), Query Frame = 0
BLAST of Cla97C02G026210 vs. TrEMBL
Match: tr|A0A061G1K9|A0A061G1K9_THECC (Plastid-specific 30S ribosomal protein 1 OS=Theobroma cacao OX=3641 GN=TCM_015512 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 5.0e-104 Identity = 207/279 (74.19%), Postives = 227/279 (81.36%), Query Frame = 0
BLAST of Cla97C02G026210 vs. Swiss-Prot
Match: sp|P19954|PRSP1_SPIOL (Ribosome-binding factor PSRP1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSRP1 PE=1 SV=2) HSP 1 Score: 332.0 bits (850), Expect = 7.2e-90 Identity = 166/240 (69.17%), Postives = 203/240 (84.58%), Query Frame = 0
BLAST of Cla97C02G026210 vs. Swiss-Prot
Match: sp|P74518|HPF_SYNY3 (Ribosome hibernation promotion factor OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=hpf PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.1e-34 Identity = 86/204 (42.16%), Postives = 129/204 (63.24%), Query Frame = 0
BLAST of Cla97C02G026210 vs. Swiss-Prot
Match: sp|P47908|HPF_SYNP2 (Ribosome hibernation promotion factor OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) OX=32049 GN=hpf PE=2 SV=2) HSP 1 Score: 139.0 bits (349), Expect = 8.9e-32 Identity = 79/199 (39.70%), Postives = 121/199 (60.80%), Query Frame = 0
BLAST of Cla97C02G026210 vs. Swiss-Prot
Match: sp|Q49VV1|HPF_STAS1 (Ribosome hibernation promotion factor OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) OX=342451 GN=hpf PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.6e-20 Identity = 65/198 (32.83%), Postives = 114/198 (57.58%), Query Frame = 0
BLAST of Cla97C02G026210 vs. Swiss-Prot
Match: sp|Q4L4H7|HPF_STAHJ (Ribosome hibernation promotion factor OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=hpf PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.3e-19 Identity = 69/199 (34.67%), Postives = 116/199 (58.29%), Query Frame = 0
BLAST of Cla97C02G026210 vs. TAIR10
Match: AT5G24490.1 (30S ribosomal protein, putative) HSP 1 Score: 346.7 bits (888), Expect = 1.6e-95 Identity = 179/248 (72.18%), Postives = 202/248 (81.45%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |