Cla97C01G009270 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G009270
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	LOB domain-containing protein 4
Location	Cla97Chr01 : 10637698 .. 10641224 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGACGGAGAATGGAAGGAAACAAGGGGGAGGAACAGGAGCAGCGCCATGTGCAGCATGCAAGCTGCTGAGAAGAAGGTGTGGAGAGGAATGTGTATTTGCTCCATACTTTCCAGCAGACCAACCTCATAAGTTTGCCAATGTTCATAAGGTTTTTGGTGCTAGCAATGTCAACAAAATGCTCCAGGTCATCTCTCCTCTTAAATTTAATCACCTATAACACATATTAACTAACTTACCACCTTTCTTTCTTCATTTCCTCTAAACCCCATCTCTCTTTTTCATGTTTTTAAAACAAGCTGGAAGTTATATGTTCATGTTAACTTATCATTAAATAATGTTATGAGTTGTAGTCTTATCATTATCATTGCTGAATTAAAAAAAAAAAAAAAAAAATGGTTTGATTAAATAGTTTCTTTTTTTTTTTTTTCTCTCTCTCTTTTTGGGTTTCTCTTGGGCAGTGTATGAAAGTGGTTTAGGAATTTTGCAACAATCTTTGACCAAAACTATTCTAACTTTATCATGACTCTTTGGTTTGGCTGCAGTGTTCTTAGGCAGGATGTCAAAAGATTAATTATCAAAACTAATATGTATAAGGTTTAAATGTTTGAATCTCTTATTTATTTTATATTGTTGAATTAAAAATTAAAAAAGCTTTGATTTATTTGTTGTCATTTATTGTTACCAAAATACAGATTTTTTCTCCCTAAATATTTATTAAACTCTAAGAATTTTTAGATTATATATAGAATTTTTTTTCTTTTTTTTGACATTATGCAGAGTGGAGATCGAACATTTGAGATTGATATTATATGTCTAACGTGAGTAGAACTATGATCATTTTGACATTAGAACTTTATTGTCAACTCTCTTGTAAAAATGTTGACAAATTTTAGTTGAGTTACCATCACATGCTAATAACTACAAAGGAATCCATCACCAAAATATAATAATATAATTCAAATGTCAGGGATGTAATTGGAGTTTTAAAAGTTTCTAAGTAATACAAAGAATCAAATGTGTTCAATATATAATAACTAAATATATAATTAATATATTTAAATAAGATTATTTCTTTCTTTTTAATTAACAAATTTTAAAGAAAAGAAAATGGTGGCTATTGCTATCAACTTTAACGGTATAACCTTTCATTGCGACCGTTAATTAATTAATAAAATATTGTTGTGGAAAATACAAAAAGGTGTGTCTTTTCATTTAAGAAAAGCATCAAAATTTCTTTTTTTTTTTTCTTTTAAAAAAAAAGTTCAAACAACTCTTTGAAAAAAGAGTTAGTTTCAAGTCAAATTCATCATGTAGACCAAACAAATTAATGAAATTACAAAAGCAACCTTATAACTTTGGCTATTACTTTACAAACCTACTTGATTACAAATTTGTAAACATGTACCCTTTTATTAGTTTAAGAAAGTTAATATACACGTTAAATCAGGACATAGTTGACAACAAATGAAAATCACGGAGATCTTATTGTACTTATAACCAATTAAAATGAAGAACTTCAATTATAATATCATATAATTTTAATTTATAAGAAATGAAAAAAAAATAAAAATAAGTTGCTAACATGTTGGATTTTATTTATTTTTTTATTTTTTTTATCTTTTAGAAAAATATGTTAGTTTGGTTAAGAAAATATATAAAATGAATCAATTTTTCCATAAAAGCTATTAAGAAGAGAATATAGTTAACTAATAAATTTAAGGTCAACTTAGGTCATTAAAGGAGACTATAATTGATAAATTAATTAATTTTCAAATCTAAAATTTTAAATAAATTATCTCAAATCACATGCCTTTTGGATTTTAGCTTTTAACCTTCTCTCAATTTGCCTTGTACGTCATGTGATTTTTTTTTTTTTTTTTAAGTTTAATTAATAAATTTCTAGTTGTTAGAGGAAAAAAACATATATTTAAAGGTTTTTTTCAAATATAACAAAATGAAGCAAAATATTTACAAATATAGCAAAATTGTACTGTCTATCTGCGATAGATCCCGATAGATTGCAGTAGACTACTATCGTGACGCAGATAATAATCTATCGCGGTCTATCGCAGATAAACTGTGTATTTTGCTGTTAGTTGTAAATATTTTCAGCGATTTTGTCATTTAAGATAATTTTTTTATATTATATTTTAATTATTATTTTTTTAAAAAAAAAACATATATTTAATTTAGCTAAAAAAGAAGGGAAAAAATGTTTTATATGGACTTTTTGGGTTAATTGTGGGGAGCCACCCACCCCTTTTGCTTGTTTGTGGAGGGACAACCAACAAATAAAAACCAAATTAGAAACTACCATACCATCCTAACTTTTTATCATACAATTGAACTTAGAATATATTATAATATTGACCACTAGAATTTTGGTCTAAATTTTAGTTTGTTTGTTTACCTTCCAATATTTGTTTACTTTATAAAATAAACAATTAATTTGCATGTTGCCACATATTTTCTTTCAAATTTTTAACAAAAATTTATGATAAAAACATGTTATTTGTTTATTCCCTCTAATTACTGATACTTATTTAATAATCATTTGATATTTTTTAAAACTTAAATTTATAACCACTCTCCGCTTTGTTTAACTATATTTTTAACCAATGTTTTTGATAATTAACCCAAGTTTTGATAACTAAAAAAAATGAAAATAAATATTTTTTTTGTTTTTAAAATTTAGCTAGAAATTCAACTCTTTTATTCAAGAAATATGTAAATTATTATAAAAAAAATCCAAAACAAATAGGATTATTTGTTAAAAACAAAAAATAAAACCCAAATGGCTACTAAACCGGGCTTAAATGTCTAAGATTAGTTGAGAAAGTTTTTTTTTTTTTTTTTTCATTGCAAACTTTAGGGCCTAAAACAAAATATTTGAAAGTTAACTAACTAAACAACAATATTTAAAAAATTAGAGATGTAAACTCGAAATAAGGGAGGAAGTTCATAGATTAAAGAAAATATATATGAAGTTAACTTAAAATTTAATTTAACCATGATATTCTATTTTATTATAAGAAGATTCTAATCTAACTTGTAGGTTAAAAACAATTCTCCGATGAAACCACGGCTAAACAAAATTCTATCTCATAAGTTTAAATCTTCTTATTCTCATGTATATCTTTCTATTTCAAAAAATAAAAAATAAAAAAGTTGACGTTATTGTGAACGTTGCAGGAGTTGCCAATTCACCAACGTGGAGATGCAGTGAGCAGTTTGGTGTATGAAGCAAATGCTCGAGTGCGCGACCCGGTGTACGGGTGCGTCGGAGCAATATCATCTCTGCAGCAGCAGATAGACGCCCTCCAAACTCAGCTGGCTTTGGCTCAAGCCGAGGTGGTGCACCTAAGGGTGCGTCAGACAGCACCATTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAATAGTGGGTCACCCTCATCAAGGCTCATGGGCTCACAATCCAGGCCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATGGGAGACTCAATGTGGTGA

mRNA sequence

ATGAAGACGGAGAATGGAAGGAAACAAGGGGGAGGAACAGGAGCAGCGCCATGTGCAGCATGCAAGCTGCTGAGAAGAAGGTGTGGAGAGGAATGTGTATTTGCTCCATACTTTCCAGCAGACCAACCTCATAAGTTTGCCAATGTTCATAAGGTTTTTGGTGCTAGCAATGTCAACAAAATGCTCCAGGAGTTGCCAATTCACCAACGTGGAGATGCAGTGAGCAGTTTGGTGTATGAAGCAAATGCTCGAGTGCGCGACCCGGTGTACGGGTGCGTCGGAGCAATATCATCTCTGCAGCAGCAGATAGACGCCCTCCAAACTCAGCTGGCTTTGGCTCAAGCCGAGGTGGTGCACCTAAGGGTGCGTCAGACAGCACCATTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAATAGTGGGTCACCCTCATCAAGGCTCATGGGCTCACAATCCAGGCCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATGGGAGACTCAATGTGGTGA

Coding sequence (CDS)

ATGAAGACGGAGAATGGAAGGAAACAAGGGGGAGGAACAGGAGCAGCGCCATGTGCAGCATGCAAGCTGCTGAGAAGAAGGTGTGGAGAGGAATGTGTATTTGCTCCATACTTTCCAGCAGACCAACCTCATAAGTTTGCCAATGTTCATAAGGTTTTTGGTGCTAGCAATGTCAACAAAATGCTCCAGGAGTTGCCAATTCACCAACGTGGAGATGCAGTGAGCAGTTTGGTGTATGAAGCAAATGCTCGAGTGCGCGACCCGGTGTACGGGTGCGTCGGAGCAATATCATCTCTGCAGCAGCAGATAGACGCCCTCCAAACTCAGCTGGCTTTGGCTCAAGCCGAGGTGGTGCACCTAAGGGTGCGTCAGACAGCACCATTTTCAAACTATGGGCTAAGCCCAACAAGCCCAAGTAATAGTGGGTCACCCTCATCAAGGCTCATGGGCTCACAATCCAGGCCCATGTTTGAGATGGATATGGTTGTGGACCAAGCCATGGGAGACTCAATGTGGTGA

Protein sequence

MKTENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW

Homology

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BLAST of Cla97C01G009270 vs. NCBI nr
Match: XP_004145462.1 (PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus] >KGN66910.1 hypothetical protein Csa_1G713680 [Cucumis sativus])

HSP 1 Score: 324.3 bits (830), Expect = 2.5e-85
Identity = 165/172 (95.93%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MKTENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60
           MKTENGRKQGG  GAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGRKQGG--GAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHL 120
           MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QIDALQTQLALAQAEVVHL
Sbjct: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHL 120

Query: 121 RVRQTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 173
           RVRQTA FSNYGLSPTSPSNSGSPSSRLMGSQSR MFEMDMVVDQAM +SMW
Sbjct: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLMGSQSRTMFEMDMVVDQAMEESMW 170

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BLAST of Cla97C01G009270 vs. NCBI nr
Match: XP_022927419.1 (LOB domain-containing protein 4-like [Cucurbita moschata] >XP_023000973.1 LOB domain-containing protein 4-like [Cucurbita maxima] >XP_023520045.1 LOB domain-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 322.0 bits (824), Expect = 1.2e-84
Identity = 162/173 (93.64%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MKTENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60
           MKTENG ++ GG GAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGLRKQGGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHL 120
           MLQELP+HQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQID+LQTQLALAQAEVVHL
Sbjct: 61  MLQELPLHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLALAQAEVVHL 120

Query: 121 RVRQTAPFSNYGLSPTSPSNSGSPSSRLMGSQ-SRPMFEMDMVVDQAMGDSMW 173
           RVRQTA FSNYGLSPTSP NSGSPSSRLMGSQ SRPMFEMDMVVDQAMGDS+W
Sbjct: 121 RVRQTASFSNYGLSPTSPGNSGSPSSRLMGSQSSRPMFEMDMVVDQAMGDSVW 173

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BLAST of Cla97C01G009270 vs. NCBI nr
Match: XP_008459081.1 (PREDICTED: LOB domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 2.7e-84
Identity = 163/172 (94.77%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MKTENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60
           MKTENGRKQGG  GAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGRKQGG--GAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHL 120
           MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QIDALQTQLALAQAEVVHL
Sbjct: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHL 120

Query: 121 RVRQTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 173
           RVRQTA FSNYGLSPTSPSNSGSPSSRL+GS SR MFEMDMVVDQA+ DSMW
Sbjct: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 170

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BLAST of Cla97C01G009270 vs. NCBI nr
Match: XP_002297935.1 (LOB domain-containing protein 4 [Populus trichocarpa] >PNT53363.1 hypothetical protein POPTR_001G081400v3 [Populus trichocarpa])

HSP 1 Score: 287.0 bits (733), Expect = 4.4e-74
Identity = 143/169 (84.62%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 4   ENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63
           E GRKQG     APCAACKLLRRRC ++CVFAPYFPAD+P KFANVHKVFGASNVNKMLQ
Sbjct: 3   EGGRKQG---APAPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQ 62

Query: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 123
           ELP+HQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR
Sbjct: 63  ELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122

Query: 124 QTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 173
           QTA  SN+GLSP SPSNSGSPSSRLMGSQ +PMF+MDMV   ++G+SMW
Sbjct: 123 QTATLSNHGLSPASPSNSGSPSSRLMGSQMKPMFDMDMVDHTSLGESMW 168

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BLAST of Cla97C01G009270 vs. NCBI nr
Match: XP_007024850.1 (PREDICTED: LOB domain-containing protein 4 isoform X1 [Theobroma cacao] >EOY27472.1 LOB domain-containing protein 4 isoform 1 [Theobroma cacao])

HSP 1 Score: 285.8 bits (730), Expect = 9.7e-74
Identity = 142/170 (83.53%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 4   ENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63
           E+GRKQG    A+PCAACKLLRRRC ++CVFAPYFPAD+P KFANVHKVFGASNVNKMLQ
Sbjct: 3   ESGRKQG---AASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQ 62

Query: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 123
           ELP+HQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR
Sbjct: 63  ELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122

Query: 124 QTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQA-MGDSMW 173
           QTA FS++G  P SPSNSGSPSS+LMGSQ++PMF++DMVVD A +G+SMW
Sbjct: 123 QTASFSHHGFGPASPSNSGSPSSKLMGSQAKPMFDVDMVVDHASLGESMW 169

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BLAST of Cla97C01G009270 vs. TrEMBL
Match: tr|A0A0A0LYG0|A0A0A0LYG0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G713680 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.6e-85
Identity = 165/172 (95.93%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MKTENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60
           MKTENGRKQGG  GAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGRKQGG--GAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHL 120
           MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QIDALQTQLALAQAEVVHL
Sbjct: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHL 120

Query: 121 RVRQTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 173
           RVRQTA FSNYGLSPTSPSNSGSPSSRLMGSQSR MFEMDMVVDQAM +SMW
Sbjct: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLMGSQSRTMFEMDMVVDQAMEESMW 170

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BLAST of Cla97C01G009270 vs. TrEMBL
Match: tr|A0A1S3CAK2|A0A1S3CAK2_CUCME (LOB domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103498298 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.8e-84
Identity = 163/172 (94.77%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MKTENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60
           MKTENGRKQGG  GAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK
Sbjct: 1   MKTENGRKQGG--GAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNK 60

Query: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHL 120
           MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQ QIDALQTQLALAQAEVVHL
Sbjct: 61  MLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHL 120

Query: 121 RVRQTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 173
           RVRQTA FSNYGLSPTSPSNSGSPSSRL+GS SR MFEMDMVVDQA+ DSMW
Sbjct: 121 RVRQTASFSNYGLSPTSPSNSGSPSSRLVGSHSRAMFEMDMVVDQAIEDSMW 170

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BLAST of Cla97C01G009270 vs. TrEMBL
Match: tr|B9GK49|B9GK49_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G081400v3 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.9e-74
Identity = 143/169 (84.62%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 4   ENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63
           E GRKQG     APCAACKLLRRRC ++CVFAPYFPAD+P KFANVHKVFGASNVNKMLQ
Sbjct: 3   EGGRKQG---APAPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQ 62

Query: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 123
           ELP+HQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR
Sbjct: 63  ELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122

Query: 124 QTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 173
           QTA  SN+GLSP SPSNSGSPSSRLMGSQ +PMF+MDMV   ++G+SMW
Sbjct: 123 QTATLSNHGLSPASPSNSGSPSSRLMGSQMKPMFDMDMVDHTSLGESMW 168

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BLAST of Cla97C01G009270 vs. TrEMBL
Match: tr|A0A061GE84|A0A061GE84_THECC (LOB domain-containing protein 4 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029315 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 6.4e-74
Identity = 142/170 (83.53%), Postives = 158/170 (92.94%), Query Frame = 0


Query: 4   ENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63
           E+GRKQG    A+PCAACKLLRRRC ++CVFAPYFPAD+P KFANVHKVFGASNVNKMLQ
Sbjct: 3   ESGRKQG---AASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQ 62

Query: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 123
           ELP+HQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR
Sbjct: 63  ELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122

Query: 124 QTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQA-MGDSMW 173
           QTA FS++G  P SPSNSGSPSS+LMGSQ++PMF++DMVVD A +G+SMW
Sbjct: 123 QTASFSHHGFGPASPSNSGSPSSKLMGSQAKPMFDVDMVVDHASLGESMW 169

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BLAST of Cla97C01G009270 vs. TrEMBL
Match: tr|A0A1R3HJG7|A0A1R3HJG7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_18891 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 6.4e-74
Identity = 144/170 (84.71%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 4   ENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63
           ENGR+QG     APCAACKLLRRRC E CVFAPYFPAD+P KFANVHKVFGASNVNKMLQ
Sbjct: 3   ENGRRQG---APAPCAACKLLRRRCAEGCVFAPYFPADEPQKFANVHKVFGASNVNKMLQ 62

Query: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 123
           ELP+HQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR
Sbjct: 63  ELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 122

Query: 124 QTAPFSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQA-MGDSMW 173
           QTA FS++G  P SPSNSGSPSS+LM SQ++PMF+MDMVVDQA  G+SMW
Sbjct: 123 QTASFSHHGFGPASPSNSGSPSSKLMNSQAKPMFDMDMVVDQASFGESMW 169

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BLAST of Cla97C01G009270 vs. Swiss-Prot
Match: sp|Q9SHE9|LBD4_ARATH (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 5.6e-65
Identity = 127/171 (74.27%), Postives = 147/171 (85.96%), Query Frame = 0


Query: 4   ENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63
           E+ RKQG    A+PCAACKLLRRRC ++CVF+PYFPAD+P KFANVH+VFGASNVNKMLQ
Sbjct: 3   ESSRKQG---AASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQ 62

Query: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 123
           ELPIHQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQID LQ QLALAQAEVVHLRVR
Sbjct: 63  ELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR 122

Query: 124 QTAPFSNYGLSPTSPSNSGSPSSRLMGSQ-SRPMF-EMDMVVDQAMGDSMW 173
           Q+  F  +GL P SPS+SGSPSS+ +  Q ++ MF  MD+V + ++G+SMW
Sbjct: 123 QSTNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMW 170

[Close]

BLAST of Cla97C01G009270 vs. Swiss-Prot
Match: sp|Q8LBW3|LBD12_ARATH (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 4.9e-45
Identity = 83/113 (73.45%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 11  GGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQR 70
           GG G++PCA+CKLLRRRC ++C+FAPYFP D PHKFA VHKVFGASNV+KMLQELP+HQR
Sbjct: 2   GGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQR 61

Query: 71  GDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 124
            DAV+SLV+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++
Sbjct: 62  ADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of Cla97C01G009270 vs. Swiss-Prot
Match: sp|Q9SA51|LBD3_ARATH (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.1e-39
Identity = 88/165 (53.33%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 12  GTGAAPCAACKLLRRRC-GEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQR 71
           G   +PCA CKLLRR+C  + CVFAPYFPA +P+KFA VHK+FGASNVNKMLQEL  + R
Sbjct: 9   GRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHR 68

Query: 72  GDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR---QTAP 131
            DAV S+VYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R      T P
Sbjct: 69  SDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLHRIHTKP 128

Query: 132 FSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 173
                 + T PSN    S            +M +      GD +W
Sbjct: 129 PPYTASTVTFPSNKDFYSD----------IDMAVAYTDDAGDFLW 163

[Close]

BLAST of Cla97C01G009270 vs. Swiss-Prot
Match: sp|Q8L5T5|LBD15_ARATH (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 3.2e-36
Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 17  PCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSS 76
           PCAACKLLRRRC +EC F+PYF   +PHKFA+VHKVFGASNV+KML E+P  QR DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 77  LVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQ 125
           LVYEAN R+RDPVYGC+GAIS+LQQQ+ A   +L   ++E++  + R+
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQAXXXELTAVRSEILKYKQRE 152

[Close]

BLAST of Cla97C01G009270 vs. Swiss-Prot
Match: sp|Q9FML4|LOB_ARATH (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.2e-36
Identity = 78/140 (55.71%), Postives = 95/140 (67.86%), Query Frame = 0


Query: 16  APCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVS 75
           +PCAACK LRR+C   C+FAPYFP ++PHKFANVHK+FGASNV K+L EL  HQR DAV+
Sbjct: 10  SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVN 69

Query: 76  SLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTAPFSNYGLSP 135
           SL YEA ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++ H           YGLS 
Sbjct: 70  SLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH-----------YGLST 129

Query: 136 TSPSNSGSPSSRLMGSQSRP 156
           ++    G+    +   Q  P
Sbjct: 130 SAAGAPGNVVDLVFQPQPLP 138

[Close]

BLAST of Cla97C01G009270 vs. TAIR10
Match: AT1G31320.1 (LOB domain-containing protein 4)

HSP 1 Score: 248.4 bits (633), Expect = 3.1e-66
Identity = 127/171 (74.27%), Postives = 147/171 (85.96%), Query Frame = 0


Query: 4   ENGRKQGGGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQ 63
           E+ RKQG    A+PCAACKLLRRRC ++CVF+PYFPAD+P KFANVH+VFGASNVNKMLQ
Sbjct: 3   ESSRKQG---AASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQ 62

Query: 64  ELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 123
           ELPIHQRGDAVSS+VYEANARVRDPVYGCVGAISSLQQQID LQ QLALAQAEVVHLRVR
Sbjct: 63  ELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVR 122

Query: 124 QTAPFSNYGLSPTSPSNSGSPSSRLMGSQ-SRPMF-EMDMVVDQAMGDSMW 173
           Q+  F  +GL P SPS+SGSPSS+ +  Q ++ MF  MD+V + ++G+SMW
Sbjct: 123 QSTNFPGHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMW 170

[Close]

BLAST of Cla97C01G009270 vs. TAIR10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 182.2 bits (461), Expect = 2.7e-46
Identity = 83/113 (73.45%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 11  GGTGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQR 70
           GG G++PCA+CKLLRRRC ++C+FAPYFP D PHKFA VHKVFGASNV+KMLQELP+HQR
Sbjct: 2   GGPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQR 61

Query: 71  GDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR 124
            DAV+SLV+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++++
Sbjct: 62  ADAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of Cla97C01G009270 vs. TAIR10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9)

HSP 1 Score: 162.5 bits (410), Expect = 2.2e-40
Identity = 88/165 (53.33%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 12  GTGAAPCAACKLLRRRC-GEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQR 71
           G   +PCA CKLLRR+C  + CVFAPYFPA +P+KFA VHK+FGASNVNKMLQEL  + R
Sbjct: 9   GRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHR 68

Query: 72  GDAVSSLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVR---QTAP 131
            DAV S+VYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R      T P
Sbjct: 69  SDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLHRIHTKP 128

Query: 132 FSNYGLSPTSPSNSGSPSSRLMGSQSRPMFEMDMVVDQAMGDSMW 173
                 + T PSN    S            +M +      GD +W
Sbjct: 129 PPYTASTVTFPSNKDFYSD----------IDMAVAYTDDAGDFLW 163

[Close]

BLAST of Cla97C01G009270 vs. TAIR10
Match: AT2G40470.1 (LOB domain-containing protein 15)

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-37
Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 17  PCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVSS 76
           PCAACKLLRRRC +EC F+PYF   +PHKFA+VHKVFGASNV+KML E+P  QR DA +S
Sbjct: 45  PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANS 104

Query: 77  LVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQ 125
           LVYEAN R+RDPVYGC+GAIS+LQQQ+ A   +L   ++E++  + R+
Sbjct: 105 LVYEANVRLRDPVYGCMGAISALQQQVQAXXXELTAVRSEILKYKQRE 152

[Close]

BLAST of Cla97C01G009270 vs. TAIR10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 152.9 bits (385), Expect = 1.8e-37
Identity = 78/140 (55.71%), Postives = 95/140 (67.86%), Query Frame = 0


Query: 16  APCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQRGDAVS 75
           +PCAACK LRR+C   C+FAPYFP ++PHKFANVHK+FGASNV K+L EL  HQR DAV+
Sbjct: 10  SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVN 69

Query: 76  SLVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTAPFSNYGLSP 135
           SL YEA ARVRDPVYGCVGAIS LQ+Q+  LQ +L  A A++ H           YGLS 
Sbjct: 70  SLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAH-----------YGLST 129

Query: 136 TSPSNSGSPSSRLMGSQSRP 156
           ++    G+    +   Q  P
Sbjct: 130 SAAGAPGNVVDLVFQPQPLP 138

The following BLAST results are available for this feature:

BLAST of Cla97C01G009270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145462.1	2.5e-85	95.93	PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus] >KGN66910.1 hy...	[more]
XP_022927419.1	1.2e-84	93.64	LOB domain-containing protein 4-like [Cucurbita moschata] >XP_023000973.1 LOB do...	[more]
XP_008459081.1	2.7e-84	94.77	PREDICTED: LOB domain-containing protein 4 [Cucumis melo]	[more]
XP_002297935.1	4.4e-74	84.62	LOB domain-containing protein 4 [Populus trichocarpa] >PNT53363.1 hypothetical p...	[more]
XP_007024850.1	9.7e-74	83.53	PREDICTED: LOB domain-containing protein 4 isoform X1 [Theobroma cacao] >EOY2747...	[more]

BLAST of Cla97C01G009270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LYG0\|A0A0A0LYG0_CUCSA	1.6e-85	95.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G713680 PE=4 SV=1	[more]
tr\|A0A1S3CAK2\|A0A1S3CAK2_CUCME	1.8e-84	94.77	LOB domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103498298 PE=4 SV=...	[more]
tr\|B9GK49\|B9GK49_POPTR	2.9e-74	84.62	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G081400v3 PE=...	[more]
tr\|A0A061GE84\|A0A061GE84_THECC	6.4e-74	83.53	LOB domain-containing protein 4 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_0293...	[more]
tr\|A0A1R3HJG7\|A0A1R3HJG7_COCAP	6.4e-74	84.71	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_18891 PE=4 ...	[more]

BLAST of Cla97C01G009270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SHE9\|LBD4_ARATH	5.6e-65	74.27	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
sp\|Q8LBW3\|LBD12_ARATH	4.9e-45	73.45	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
sp\|Q9SA51\|LBD3_ARATH	4.1e-39	53.33	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
sp\|Q8L5T5\|LBD15_ARATH	3.2e-36	63.89	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
sp\|Q9FML4\|LOB_ARATH	3.2e-36	55.71	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]

BLAST of Cla97C01G009270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31320.1	3.1e-66	74.27	LOB domain-containing protein 4	[more]
AT2G30130.1	2.7e-46	73.45	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G16530.1	2.2e-40	53.33	ASYMMETRIC LEAVES 2-like 9	[more]
AT2G40470.1	1.8e-37	63.89	LOB domain-containing protein 15	[more]
AT5G63090.2	1.8e-37	55.71	Lateral organ boundaries (LOB) domain family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0048507	meristem development
biological_process	GO:0007389	pattern specification process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G009270.1	Cla97C01G009270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..154
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 5..172
None	No IPR available	PANTHER	PTHR31301:SF58	SUBFAMILY NOT NAMED	coord: 5..172
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 17..114 e-value: 8.9E-44 score: 148.0
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 16..117 score: 26.474

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G009270	Cla009182	Watermelon (97103) v1	wmwmbB237
Cla97C01G009270	Csa1G713680	Cucumber (Chinese Long) v2	cuwmbB011
Cla97C01G009270	MELO3C021789	Melon (DHL92) v3.5.1	mewmbB135
Cla97C01G009270	ClCG01G009020	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G009270	CSPI01G34800	Wild cucumber (PI 183967)	cpiwmbB011
Cla97C01G009270	Cucsa.236600	Cucumber (Gy14) v1	cgywmbB417
Cla97C01G009270	CmaCh13G004470	Cucurbita maxima (Rimu)	cmawmbB213
Cla97C01G009270	CmoCh13G004810	Cucurbita moschata (Rifu)	cmowmbB195
Cla97C01G009270	Lsi02G010150	Bottle gourd (USVL1VR-Ls)	lsiwmbB153
Cla97C01G009270	CsGy1G033290	Cucumber (Gy14) v2	cgybwmbB011
Cla97C01G009270	MELO3C021789.2	Melon (DHL92) v3.6.1	medwmbB128
Cla97C01G009270	Carg21434	Silver-seed gourd	carwmbB0421
Cla97C01G009270	CsaV3_1G046670	Cucumber (Chinese Long) v3	cucwmbB010
Cla97C01G009270	Bhi08G000780	Wax gourd	wgowmbB458

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G009270	Silver-seed gourd	carwmbB0470
Cla97C01G009270	Cucurbita maxima (Rimu)	cmawmbB394
Cla97C01G009270	Cucurbita moschata (Rifu)	cmowmbB377
Cla97C01G009270	Melon (DHL92) v3.6.1	medwmbB131