Cla97C01G006730 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G006730
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Dynein light chain
Location	Cla97Chr01 : 6777035 .. 6779200 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGAGCGGAAATGGAGCTTGAGCGACGGAGCAAGTTTCTGAATGGGCTTATTTTGAAGAAGAAGGCAGGGGAGCAGCAAGAGCAGCGCGATCGCCTCAATGTTCGGGTTAGAGCCTCCGATATGCCGTTTCCTCTGCAGAATCGTGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGCCTTGCTCTTGCCCTTAAAAAGGTTAGAAGCAAAAAACAAAATCTAACTCTGAACTAACTTTTGGTTCTGAAATGCATTTTCGTGGTTGCGATTATCTGTGAAGTGCAGCTTCATTACCCAGTTTTTGTTTTGTATTTTGAGTTAATGAAAGTTTTTTGGTATGGTTATCGGCTGGTCTGGATGTGTTTGATGAAATGCCTCTTTGGTATTAACATGATTTATTTTCGGGATTTTAAGTCTGGGATTTTTGGGTTTTCACAACATTCGGTTTCTGAATCATGAACGTACTCTGCAGTTGAAGGGGTCTCTGCGGTTTCTGAATCATGTTTTTCCTGAAGGGGTCTCTGAATTAATTAACTAGCTCTGTAAACTGTTCATGTTTTTCCTGATTTGAGCCCTTCCAAACTTTGGGATTAGCTTTTCAATTATAATCGTAGTTAGCAAATTAAATGTTCTTTATTGCTCTCGGGTCCTCCCTAGACTTGTACTTCGGTAGAGGGGATGCCATGAAAAAAGTTGTGGACATGACAATTCTAGTGGGAACTTGCTGCCCACCATTAATTCCACCAAATCTGATAGCCATCCACTACTGACACTTGCCAGTTGCCTTCTCATTTTTCTCTGGTTCTCCGGAAAACTTGTCGGAACAAGGAGGTTGGAGTCATTGTCAAGTGCTTTATGTTATGGTTAAACACTAGATTTAAGAGGAGGTTACTTTATTCTTAGCTGAAATTTCCCCTGAATTTGCCCTTTTCTACTTCATATGTAGTTTTGTCTTTGTGCCATGTGTTTTTATGTAGTCCTTCAAAGTATTAGCTTTATCTATAATGGCTGCTCCCTCTTCTCTACCCTCTCTTCCTAGCTAAGAAATAAAAGCTGTTTGCAAATCTGTTTTAAAAATTGTTTTTTGGTTAAAATATTGTGGTTGATTGATTGTAAAAGTCAATATCGTTGTGTATATAAAAACCACTAATCAAAATTTCAGAAATTTAAAACGAGCAATGACCCTTTTTTTTCCCTCTTTTTATTTTTTTTGATAAGTACGCTATTTGTGAACATATCTAAAAAAAAGTTTCTTTTTTCTTTTTGAACCTTTTTTGTTTAGTTGTAATGATAGGCAACGATTATGTTTTAAATCTTTTTTTGTGAAATATCCAAAGCTCTCACACCTTGTGGAAAACATGCATATGAAGACATAATCATTAATCATTATAGTGGTTTTGCCAGACATTATATTCATTACAACAAAATAATTAAGTCTAAAACCATGAAGCTGCATATTCTTGTGCTTGAGACAAAATGCACTAATTCTTGAAGTTGAAACCTTTTTTGCTCTGAGCTAAGCATTTTCCTCCAGATTAGAGCATATTTGAAAGGTTTATTGTTGTCTCTTGTCTTAAATAAAAAGTGTAACAAACCAACCTTGGCATAGTACAAAAAAGAAACTTAAGAATGACTTTAAAAATCAAATGGTTGCTTGTAGTATGATAGGAGCCAAAACACAATCACAAAATATAAAGGGTAAAGTTCTTACCAGATAAACGACCAAGTAATTCGAGGAATTTGGACTCTTCCTTTCTTGAGATCGCTCTAGACTAAATCAAATGAATCAATGTCTAACTTCTCCCCTCCTCACCCCTTCAATTAATAAATAAAATACCCTAACAACTACTCTAACTAATTATTAATATACCCTTAATAATATTCCAATCATAGTAGGAACCATTCTCTAATCGAATGAAGTTAAGTTTGATGGTAATGAATATGTAATGGTTTTTTCAGGAATTTGATTCCTCCTATGGTCCGGCTTGGCACTGCATCGTGGGAACTAGCTTTGGGTCCTATGTAACACATTCTCTGGGTGGGTTCTTGTATTTTTCAATAGATAAAGTTTACATCCTTCTCTTCAAAACGGCAGTGGAGCCTCTATCTCGTGGAACATCGTTGAAAGATTGA

mRNA sequence

ATGGATGGAGCGGAAATGGAGCTTGAGCGACGGAGCAAGTTTCTGAATGGGCTTATTTTGAAGAAGAAGGCAGGGGAGCAGCAAGAGCAGCGCGATCGCCTCAATGTTCGGGTTAGAGCCTCCGATATGCCGTTTCCTCTGCAGAATCGTGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGCCTTGCTCTTGCCCTTAAAAAGGAATTTGATTCCTCCTATGGTCCGGCTTGGCACTGCATCGTGGGAACTAGCTTTGGGTCCTATGTAACACATTCTCTGGGTGGGTTCTTGTATTTTTCAATAGATAAAGTTTACATCCTTCTCTTCAAAACGGCAGTGGAGCCTCTATCTCGTGGAACATCGTTGAAAGATTGA

Coding sequence (CDS)

ATGGATGGAGCGGAAATGGAGCTTGAGCGACGGAGCAAGTTTCTGAATGGGCTTATTTTGAAGAAGAAGGCAGGGGAGCAGCAAGAGCAGCGCGATCGCCTCAATGTTCGGGTTAGAGCCTCCGATATGCCGTTTCCTCTGCAGAATCGTGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCAAACGCCTTGCTCTTGCCCTTAAAAAGGAATTTGATTCCTCCTATGGTCCGGCTTGGCACTGCATCGTGGGAACTAGCTTTGGGTCCTATGTAACACATTCTCTGGGTGGGTTCTTGTATTTTTCAATAGATAAAGTTTACATCCTTCTCTTCAAAACGGCAGTGGAGCCTCTATCTCGTGGAACATCGTTGAAAGATTGA

Protein sequence

MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

Homology

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BLAST of Cla97C01G006730 vs. NCBI nr
Match: XP_004150121.1 (PREDICTED: dynein light chain 1, cytoplasmic [Cucumis sativus] >XP_008467114.1 PREDICTED: dynein light chain 1, cytoplasmic [Cucumis melo] >KGN51478.1 hypothetical protein Csa_5G567290 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 6.9e-67
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDM FPLQNRAFSCARELLD
Sbjct: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPLSRGTSLKD 135
           TAVEPLSRG SLKD
Sbjct: 121 TAVEPLSRGASLKD 134

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BLAST of Cla97C01G006730 vs. NCBI nr
Match: XP_023551552.1 (dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.0 bits (663), Expect = 4.4e-66
Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           M+GAEMELERRSKFLNGLILKKKAGE QE RDRLNVRVRASDMPFPLQNRAFSCARELLD
Sbjct: 1   MEGAEMELERRSKFLNGLILKKKAGEHQEHRDRLNVRVRASDMPFPLQNRAFSCARELLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPLSRGTSLKD 135
           TAVEPLSRG SLKD
Sbjct: 121 TAVEPLSRGKSLKD 134

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BLAST of Cla97C01G006730 vs. NCBI nr
Match: XP_022939677.1 (dynein light chain LC6, flagellar outer arm [Cucurbita moschata])

HSP 1 Score: 258.8 bits (660), Expect = 9.9e-66
Identity = 129/134 (96.27%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           M+GAEMELERR+KFLNGLILKKKAGE QE RDRLNVRVRASDMPFPLQNRAFSCARELLD
Sbjct: 1   MEGAEMELERRTKFLNGLILKKKAGEHQEHRDRLNVRVRASDMPFPLQNRAFSCARELLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPLSRGTSLKD 135
           TAVEPLSRG SLKD
Sbjct: 121 TAVEPLSRGKSLKD 134

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BLAST of Cla97C01G006730 vs. NCBI nr
Match: XP_022973572.1 (dynein light chain LC6, flagellar outer arm [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 1.7e-65
Identity = 128/134 (95.52%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           M+GAEMELERRSKFLNGLILKKKAGE QE RDRLN+RVRASDMPFPLQNRAFSCARELLD
Sbjct: 1   MEGAEMELERRSKFLNGLILKKKAGEHQEHRDRLNIRVRASDMPFPLQNRAFSCARELLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           SMPGKLDSKRLAL LKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  SMPGKLDSKRLALTLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPLSRGTSLKD 135
           TAVEPLSRG SLKD
Sbjct: 121 TAVEPLSRGKSLKD 134

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BLAST of Cla97C01G006730 vs. NCBI nr
Match: XP_022146325.1 (dynein light chain LC6, flagellar outer arm [Momordica charantia])

HSP 1 Score: 257.3 bits (656), Expect = 2.9e-65
Identity = 128/134 (95.52%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           M+GAEMELERRSKFLNGLI KKKA EQQE+RDRLN+RVRASDMPFPLQNRAFSCARELLD
Sbjct: 1   MEGAEMELERRSKFLNGLIQKKKAVEQQEERDRLNIRVRASDMPFPLQNRAFSCARELLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           SMPGKLDSKR ALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  SMPGKLDSKRFALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPLSRGTSLKD 135
           TAVEPLSRGTSLKD
Sbjct: 121 TAVEPLSRGTSLKD 134

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BLAST of Cla97C01G006730 vs. TrEMBL
Match: tr|A0A1S3CSY6|A0A1S3CSY6_CUCME (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103504546 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.5e-67
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDM FPLQNRAFSCARELLD
Sbjct: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPLSRGTSLKD 135
           TAVEPLSRG SLKD
Sbjct: 121 TAVEPLSRGASLKD 134

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BLAST of Cla97C01G006730 vs. TrEMBL
Match: tr|A0A0A0KPF8|A0A0A0KPF8_CUCSA (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_5G567290 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.5e-67
Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDM FPLQNRAFSCARELLD
Sbjct: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPLSRGTSLKD 135
           TAVEPLSRG SLKD
Sbjct: 121 TAVEPLSRGASLKD 134

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BLAST of Cla97C01G006730 vs. TrEMBL
Match: tr|A0A061E8U7|A0A061E8U7_THECC (Dynein light chain OS=Theobroma cacao OX=3641 GN=TCM_011012 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.8e-56
Identity = 113/126 (89.68%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           MDGAE+ELERRSKFLN LI KKKA EQQ+Q +RLNV+VRASDMP PLQNRAF CAR+ LD
Sbjct: 1   MDGAELELERRSKFLNSLIQKKKAIEQQDQTERLNVKVRASDMPLPLQNRAFRCARDQLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           SMPGKLDSKRLALALKKEFDS+YGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  SMPGKLDSKRLALALKKEFDSTYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPL 127
           TAVEPL
Sbjct: 121 TAVEPL 126

[Close]

BLAST of Cla97C01G006730 vs. TrEMBL
Match: tr|A0A2I4G1S5|A0A2I4G1S5_9ROSI (Dynein light chain OS=Juglans regia OX=51240 GN=LOC109003969 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.0e-56
Identity = 114/126 (90.48%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           M+GAE ELERRSKFLNGLI KKKA +QQEQ DRLNVRVRA DMP PLQN AF CAR+ LD
Sbjct: 1   MEGAEEELERRSKFLNGLIQKKKAIDQQEQHDRLNVRVRACDMPLPLQNCAFRCARDQLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPL 127
           TAVEPL
Sbjct: 121 TAVEPL 126

[Close]

BLAST of Cla97C01G006730 vs. TrEMBL
Match: tr|A0A1U8N1Y6|A0A1U8N1Y6_GOSHI (Dynein light chain OS=Gossypium hirsutum OX=3635 GN=LOC107942648 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.0e-55
Identity = 112/126 (88.89%), Postives = 117/126 (92.86%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           MDGAEMELERRSKFLN LI KKKA EQQEQ +RLNV+VRASDMP  LQN+AF CAR+ LD
Sbjct: 1   MDGAEMELERRSKFLNSLIQKKKAIEQQEQNERLNVKVRASDMPLALQNKAFKCARDQLD 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
            MPGKLDSKRLALALKKEFDS+YGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
Sbjct: 61  YMPGKLDSKRLALALKKEFDSTYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120

Query: 121 TAVEPL 127
           TAVEPL
Sbjct: 121 TAVEPL 126

[Close]

BLAST of Cla97C01G006730 vs. Swiss-Prot
Match: sp|O02414|DYL1_HELCR (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-14
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 38  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGS 97
           ++ +DMP  +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGS
Sbjct: 8   IKNADMPEDMQQDAVDCATQALEKFNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 98  YVTHSLGGFLYFSIDKVYILLFKT 122
           YVTH    F+YF + +V +LLFK+
Sbjct: 68  YVTHETKHFIYFYLGQVAVLLFKS 88

[Close]

BLAST of Cla97C01G006730 vs. Swiss-Prot
Match: sp|Q86A88|DYL_DICDI (Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.0e-14
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 36  VRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSF 95
           + V+ +DMP  +Q  A  C  +  +    + D   +A+ +KKEFD  Y P WHCIVG SF
Sbjct: 8   INVKNADMPDFMQQDATECTIKAFEETNIERD---IAMIIKKEFDKKYSPTWHCIVGKSF 67

Query: 96  GSYVTHSLGGFLYFSIDKVYILLFK 121
           GS+VTH    F+YF+I+K  +LLFK
Sbjct: 68  GSFVTHETKNFIYFNINKHSVLLFK 89

[Close]

BLAST of Cla97C01G006730 vs. Swiss-Prot
Match: sp|Q22799|DYL1_CAEEL (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-13
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 38  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGS 97
           ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGS
Sbjct: 8   IKNADMSDDMQQDAIDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 98  YVTHSLGGFLYFSIDKVYILLFKT 122
           YVTH    F+YF + +V ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Cla97C01G006730 vs. Swiss-Prot
Match: sp|Q24117|DYL1_DROME (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-13
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 38  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGS 97
           ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGS
Sbjct: 8   IKNADMSEEMQQDAVDCATQALEKYNIEKD---IAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 98  YVTHSLGGFLYFSIDKVYILLFKT 122
           YVTH    F+YF + +V ILLFK+
Sbjct: 68  YVTHETRHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Cla97C01G006730 vs. Swiss-Prot
Match: sp|O96860|DYL2_DROME (Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-13
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 0


Query: 38  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGS 97
           ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGS
Sbjct: 8   IKNADMSEEMQQDAVDCATQALEKYNIEKD---IAAFIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 98  YVTHSLGGFLYFSIDKVYILLFKT 122
           YVTH    F+YF + +V ILLFK+
Sbjct: 68  YVTHETRHFIYFYLGQVAILLFKS 88

[Close]

BLAST of Cla97C01G006730 vs. TAIR10
Match: AT1G23220.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 206.8 bits (525), Expect = 8.1e-54
Identity = 100/128 (78.12%), Postives = 113/128 (88.28%), Query Frame = 0


Query: 1   MDGAEMELERRSKFLNGLILKKKAGEQQEQRDRLNVRVRASDMPFPLQNRAFSCARELLD 60
           M+G E+ELERRSKFLN LI KKKA EQQ+Q+D  NVRVRASDMP P QNRAFS +RE+L+
Sbjct: 1   MEGVELELERRSKFLNSLIQKKKAKEQQDQKDEFNVRVRASDMPLPQQNRAFSLSREILN 60

Query: 61  SMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK 120
           + PGK D+KRLA ALKK+FDS+YGPAWHCIVGTSFGSYVTHS GGFLYF IDKVY+LLFK
Sbjct: 61  ATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQIDKVYVLLFK 120

Query: 121 TAVEPLSR 129
           TAVEPL +
Sbjct: 121 TAVEPLDQ 128

[Close]

BLAST of Cla97C01G006730 vs. TAIR10
Match: AT5G20110.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 123.2 bits (308), Expect = 1.2e-28
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 32  DRLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIV 91
           + L VR+ A+DMP  +Q  AF CAR  LDS+  K  SK +A  LKKEFD  YGPAWHCIV
Sbjct: 113 EMLTVRILAADMPGFMQAHAFRCARMTLDSLE-KFSSKHMAFNLKKEFDKGYGPAWHCIV 172

Query: 92  GTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS 128
           G+SFGS+VTHS G F+YFS+DK+Y+LLFKT V P S
Sbjct: 173 GSSFGSFVTHSTGCFIYFSMDKLYVLLFKTKVRPAS 207

[Close]

BLAST of Cla97C01G006730 vs. TAIR10
Match: AT3G16120.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 74.7 bits (182), Expect = 4.8e-14
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 37  RVRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFG 96
           +V  +DMP  +Q +A   A + LD +    DS  +A  +KKEFD  YG  W C+VGT+FG
Sbjct: 7   KVEETDMPVKMQMQAMKIASQSLD-LFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNFG 66

Query: 97  SYVTHSLGGFLYFSIDKVYILLFKTA 123
            + THS G F+YF +  +  L+FK A
Sbjct: 67  CFFTHSKGTFIYFHLGTLNFLIFKGA 91

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BLAST of Cla97C01G006730 vs. TAIR10
Match: AT4G27360.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 72.8 bits (177), Expect = 1.8e-13
Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 41  SDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGSYVT 100
           +DM   ++  A S A + LD      +  ++A  +KKEFD SYG  W CIVGT FGS+VT
Sbjct: 11  TDMKQTMKEDALSLASKALDCF-DVTEPTQIARFIKKEFDRSYGSGWQCIVGTHFGSFVT 70

Query: 101 HSLGGFLYFSIDKVYILLFKTAV 124
           H  G F++FS+  + ILLFK +V
Sbjct: 71  HCSGCFIHFSVGSLTILLFKGSV 92

[Close]

BLAST of Cla97C01G006730 vs. TAIR10
Match: AT4G15930.1 (Dynein light chain type 1 family protein)

HSP 1 Score: 70.5 bits (171), Expect = 9.1e-13
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 38  VRASDMPFPLQNRAFSCARELLDSMPGKLDSKRLALALKKEFDSSYGPAWHCIVGTSFGS 97
           ++++DM   +Q  A   A    +    + D   +A  +KKEFD  +G  WHCIVG +FGS
Sbjct: 42  IKSADMKDDMQKEAIEIAISAFEKYSVEKD---IAENIKKEFDKKHGATWHCIVGRNFGS 101

Query: 98  YVTHSLGGFLYFSIDKVYILLFKT 122
           YVTH    F+YF +D+  +LLFK+
Sbjct: 102 YVTHETNHFVYFYLDQKAVLLFKS 122

The following BLAST results are available for this feature:

BLAST of Cla97C01G006730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150121.1	6.9e-67	98.51	PREDICTED: dynein light chain 1, cytoplasmic [Cucumis sativus] >XP_008467114.1 P...	[more]
XP_023551552.1	4.4e-66	97.01	dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]	[more]
XP_022939677.1	9.9e-66	96.27	dynein light chain LC6, flagellar outer arm [Cucurbita moschata]	[more]
XP_022973572.1	1.7e-65	95.52	dynein light chain LC6, flagellar outer arm [Cucurbita maxima]	[more]
XP_022146325.1	2.9e-65	95.52	dynein light chain LC6, flagellar outer arm [Momordica charantia]	[more]

BLAST of Cla97C01G006730 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CSY6\|A0A1S3CSY6_CUCME	4.5e-67	98.51	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103504546 PE=3 SV=1	[more]
tr\|A0A0A0KPF8\|A0A0A0KPF8_CUCSA	4.5e-67	98.51	Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_5G567290 PE=3 SV=1	[more]
tr\|A0A061E8U7\|A0A061E8U7_THECC	2.8e-56	89.68	Dynein light chain OS=Theobroma cacao OX=3641 GN=TCM_011012 PE=3 SV=1	[more]
tr\|A0A2I4G1S5\|A0A2I4G1S5_9ROSI	8.0e-56	90.48	Dynein light chain OS=Juglans regia OX=51240 GN=LOC109003969 PE=3 SV=1	[more]
tr\|A0A1U8N1Y6\|A0A1U8N1Y6_GOSHI	3.0e-55	88.89	Dynein light chain OS=Gossypium hirsutum OX=3635 GN=LOC107942648 PE=3 SV=1	[more]

BLAST of Cla97C01G006730 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O02414\|DYL1_HELCR	1.6e-14	45.24	Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=10431...	[more]
sp\|Q86A88\|DYL_DICDI	6.0e-14	44.71	Dynein light chain, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=dlcB PE=...	[more]
sp\|Q22799\|DYL1_CAEEL	1.0e-13	45.24	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
sp\|Q24117\|DYL1_DROME	1.3e-13	45.24	Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1...	[more]
sp\|O96860\|DYL2_DROME	1.3e-13	45.24	Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=Cdlc2 PE...	[more]

BLAST of Cla97C01G006730 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23220.1	8.1e-54	78.13	Dynein light chain type 1 family protein	[more]
AT5G20110.1	1.2e-28	62.50	Dynein light chain type 1 family protein	[more]
AT3G16120.1	4.8e-14	43.02	Dynein light chain type 1 family protein	[more]
AT4G27360.1	1.8e-13	45.78	Dynein light chain type 1 family protein	[more]
AT4G15930.1	9.1e-13	40.48	Dynein light chain type 1 family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007017	microtubule-based process

Vocabulary: **Cellular Component**
Term	Definition
GO:0030286	dynein complex

Vocabulary: **INTERPRO**
Term	Definition
IPR037177	DLC_sf
IPR001372	Dynein_light_chain_typ-1/2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000582	positive regulation of ATP-dependent microtubule motor activity, plus-end-directed
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003774	motor activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008574	ATP-dependent microtubule motor activity, plus-end-directed
molecular_function	GO:0045505	dynein intermediate chain binding
molecular_function	GO:0051959	dynein light intermediate chain binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G006730.1	Cla97C01G006730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 31..121 e-value: 1.6E-39 score: 147.3
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 36..121 e-value: 3.5E-29 score: 100.9
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..125
IPR037177	Dynein light chain superfamily	GENE3D	G3DSA:3.30.740.10		coord: 33..122 e-value: 1.0E-30 score: 107.6
IPR037177	Dynein light chain superfamily	SUPERFAMILY	SSF54648	DLC	coord: 28..121
None	No IPR available	PANTHER	PTHR11886:SF39	DYNEIN LIGHT CHAIN TYPE 1-LIKE PROTEIN	coord: 1..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G006730	Cla003942	Watermelon (97103) v1	wmwmbB236
Cla97C01G006730	Csa5G567290	Cucumber (Chinese Long) v2	cuwmbB344
Cla97C01G006730	MELO3C005289	Melon (DHL92) v3.5.1	mewmbB009
Cla97C01G006730	ClCG01G006420	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G006730	CSPI05G19410	Wild cucumber (PI 183967)	cpiwmbB358
Cla97C01G006730	Cucsa.280210	Cucumber (Gy14) v1	cgywmbB485
Cla97C01G006730	CmaCh15G009710	Cucurbita maxima (Rimu)	cmawmbB286
Cla97C01G006730	CmaCh04G021140	Cucurbita maxima (Rimu)	cmawmbB710
Cla97C01G006730	CmoCh15G010170	Cucurbita moschata (Rifu)	cmowmbB268
Cla97C01G006730	Lsi09G006760	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G006730	CsGy5G018910	Cucumber (Gy14) v2	cgybwmbB327
Cla97C01G006730	MELO3C005289.2	Melon (DHL92) v3.6.1	medwmbB007
Cla97C01G006730	Carg26062	Silver-seed gourd	carwmbB0451
Cla97C01G006730	Carg23722	Silver-seed gourd	carwmbB1002
Cla97C01G006730	CsaV3_5G028260	Cucumber (Chinese Long) v3	cucwmbB359
Cla97C01G006730	Bhi12G000802	Wax gourd	wgowmbB054

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G006730	Silver-seed gourd	carwmbB0919
Cla97C01G006730	Cucumber (Gy14) v2	cgybwmbB323
Cla97C01G006730	Cucurbita maxima (Rimu)	cmawmbB705
Cla97C01G006730	Cucurbita maxima (Rimu)	cmawmbB709
Cla97C01G006730	Cucurbita moschata (Rifu)	cmowmbB676
Cla97C01G006730	Cucurbita moschata (Rifu)	cmowmbB679
Cla97C01G006730	Cucurbita moschata (Rifu)	cmowmbB681
Cla97C01G006730	Cucumber (Chinese Long) v3	cucwmbB355