Cla021720 (gene) Watermelon (97103) v1

Overview
NameCla021720
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEthylene responsive transcription factor 12 (AHRD V1 *-** C0J9I3_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
LocationChr5 : 5618764 .. 5619789 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTACCTCCAAAGCCTCAGATAAAGGCTACCCAATTTATGAAACTGGTCAATCTCAAATGGGTTTTGCTCTAATTCAAAGAAACTCATCTCCAATATCTCAAAGTGGAGGAGAGAGAAGAGGCAGAAGAAAACAAGCTGAACCAGGAAGGTTCCTTGGTGTCAGAAGAAGGCCTTGGGGAAGATATGCTGCTGAAATTAGAGACCCAACAACCAAAGAAAGGCATTGGCTTGGAACTTTTGATACTGCCCATGAAGCTGCCCTGGCTTATGACAGAGCTGCCCTGTCAATGAAAGGCACTCAAGCAAGAACAAATTTCATTTACTCTGACACTTCAACCTTCCATTCTCTTCTCACTGCATTTGATGTCCAAACTTTGCTTCCTAATTCTGATCATTCTAACTCCAAATTACAACAAACCCCCTCCCCCATTACTATTCCCATTAATCAAAACAACAACATCTCATTTGCTCAATCTCAGCCATCCATTCCTGAAACTTCCTCAAATCCTTCTGTCCATGATGATCATGACAGTAATTTCTTCTTCTCTAATGATTCCAATTCAGGCTATTTGAGCTGCATTGTTCCTGATAATTGCTTGAAACCCCCTTCAGATTCTAAACACAAAACCCAACCCAGCTCCACTACTTCAAATGATCTTCAAAAATTCAGTTTCTTTACCTCAAACTCCATTGAAACTCTCCCTTTTAAAAGTTTGGATGTTTCATCCATGGCATATAATAACAATAATAACAGTAATGCTGGTTATGGCTCTGTTATGGATGAATCAAATTGTTCAAATGATGGAGTAGTTTGGGATAAACAACAAAATTGGGAGAGTAATAGTGATGAACTCTCAGCTATAATCAATAGCTCTTCTTCCTCTTCTATGGTGGCTGAAAATGGAGCTTTTCATCCATTTACGAACAGTTCTTATGGTGGTTTGTTGCCTCAATCTTCTACTTGTTCTCCTTCAGCTCCTTCTTTTGGTGATGCATTTGATTTTGGGTATACATTACTTTGA

mRNA sequence

ATGGCTACCTCCAAAGCCTCAGATAAAGGCTACCCAATTTATGAAACTGGTCAATCTCAAATGGGTTTTGCTCTAATTCAAAGAAACTCATCTCCAATATCTCAAAGTGGAGGAGAGAGAAGAGGCAGAAGAAAACAAGCTGAACCAGGAAGGTTCCTTGGTGTCAGAAGAAGGCCTTGGGGAAGATATGCTGCTGAAATTAGAGACCCAACAACCAAAGAAAGGCATTGGCTTGGAACTTTTGATACTGCCCATGAAGCTGCCCTGGCTTATGACAGAGCTGCCCTGTCAATGAAAGGCACTCAAGCAAGAACAAATTTCATTTACTCTGACACTTCAACCTTCCATTCTCTTCTCACTGCATTTGATGTCCAAACTTTGCTTCCTAATTCTGATCATTCTAACTCCAAATTACAACAAACCCCCTCCCCCATTACTATTCCCATTAATCAAAACAACAACATCTCATTTGCTCAATCTCAGCCATCCATTCCTGAAACTTCCTCAAATCCTTCTGTCCATGATGATCATGACAGTAATTTCTTCTTCTCTAATGATTCCAATTCAGGCTATTTGAGCTGCATTGTTCCTGATAATTGCTTGAAACCCCCTTCAGATTCTAAACACAAAACCCAACCCAGCTCCACTACTTCAAATGATCTTCAAAAATTCAGTTTCTTTACCTCAAACTCCATTGAAACTCTCCCTTTTAAAAGTTTGGATGTTTCATCCATGGCATATAATAACAATAATAACAGTAATGCTGGTTATGGCTCTGTTATGGATGAATCAAATTGTTCAAATGATGGAGTAGTTTGGGATAAACAACAAAATTGGGAGAGTAATAGTGATGAACTCTCAGCTATAATCAATAGCTCTTCTTCCTCTTCTATGGTGGCTGAAAATGGAGCTTTTCATCCATTTACGAACAGTTCTTATGGTGGTTTGTTGCCTCAATCTTCTACTTGTTCTCCTTCAGCTCCTTCTTTTGGTGATGCATTTGATTTTGGGTATACATTACTTTGA

Coding sequence (CDS)

ATGGCTACCTCCAAAGCCTCAGATAAAGGCTACCCAATTTATGAAACTGGTCAATCTCAAATGGGTTTTGCTCTAATTCAAAGAAACTCATCTCCAATATCTCAAAGTGGAGGAGAGAGAAGAGGCAGAAGAAAACAAGCTGAACCAGGAAGGTTCCTTGGTGTCAGAAGAAGGCCTTGGGGAAGATATGCTGCTGAAATTAGAGACCCAACAACCAAAGAAAGGCATTGGCTTGGAACTTTTGATACTGCCCATGAAGCTGCCCTGGCTTATGACAGAGCTGCCCTGTCAATGAAAGGCACTCAAGCAAGAACAAATTTCATTTACTCTGACACTTCAACCTTCCATTCTCTTCTCACTGCATTTGATGTCCAAACTTTGCTTCCTAATTCTGATCATTCTAACTCCAAATTACAACAAACCCCCTCCCCCATTACTATTCCCATTAATCAAAACAACAACATCTCATTTGCTCAATCTCAGCCATCCATTCCTGAAACTTCCTCAAATCCTTCTGTCCATGATGATCATGACAGTAATTTCTTCTTCTCTAATGATTCCAATTCAGGCTATTTGAGCTGCATTGTTCCTGATAATTGCTTGAAACCCCCTTCAGATTCTAAACACAAAACCCAACCCAGCTCCACTACTTCAAATGATCTTCAAAAATTCAGTTTCTTTACCTCAAACTCCATTGAAACTCTCCCTTTTAAAAGTTTGGATGTTTCATCCATGGCATATAATAACAATAATAACAGTAATGCTGGTTATGGCTCTGTTATGGATGAATCAAATTGTTCAAATGATGGAGTAGTTTGGGATAAACAACAAAATTGGGAGAGTAATAGTGATGAACTCTCAGCTATAATCAATAGCTCTTCTTCCTCTTCTATGGTGGCTGAAAATGGAGCTTTTCATCCATTTACGAACAGTTCTTATGGTGGTTTGTTGCCTCAATCTTCTACTTGTTCTCCTTCAGCTCCTTCTTTTGGTGATGCATTTGATTTTGGGTATACATTACTTTGA

Protein sequence

MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLTAFDVQTLLPNSDHSNSKLQQTPSPITIPINQNNNISFAQSQPSIPETSSNPSVHDDHDSNFFFSNDSNSGYLSCIVPDNCLKPPSDSKHKTQPSSTTSNDLQKFSFFTSNSIETLPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQNWESNSDELSAIINSSSSSSMVAENGAFHPFTNSSYGGLLPQSSTCSPSAPSFGDAFDFGYTLL
Homology
[Close]
BLAST of Cla021720 vs. Swiss-Prot
Match: ERF86_ARATH (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF086 PE=2 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 1.3e-54
Identity = 156/379 (41.16%), Postives = 207/379 (54.62%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSP---ISQSGGERRGRR-KQAEPGRFLGVR 60
           M+TSK  D   P +ET Q+QMGFALI +N+S     + + GERRGRR KQAEPGRFLGVR
Sbjct: 1   MSTSKTLDHNKP-FETSQTQMGFALIHQNTSANTTTTTTTGERRGRRSKQAEPGRFLGVR 60

Query: 61  RRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFH 120
           RRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSM+GTQARTNF+Y+ T   H
Sbjct: 61  RRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFVYTPTDV-H 120

Query: 121 SLLTAFDVQTLLPNSDHSNSKLQQTPSPITIPINQNNNISFAQSQP---SIPET------ 180
           ++LT  ++ +L+ +  ++N       SP  +  +  +  ++ Q Q    ++P+T      
Sbjct: 121 TILTNPNLHSLIVSPYNNNQSFLPNSSPQFVIDHHPHYQNYHQPQQPKHTLPQTVLPAAS 180

Query: 181 ----------------------SSNPSVHD--DHDSNFFFS--------NDSNSGYLSCI 240
                                 SSN S+    D ++NFFFS        +++NSGYL CI
Sbjct: 181 FKTPVRHQSVDIQAFGNSPQNSSSNGSLSSSLDEENNFFFSLTSEEHNKSNNNSGYLDCI 240

Query: 241 VPDNCLKPPSDSKHKTQPSSTTSNDLQKFSFFTSNSIETLPFKSLDVSSMAYNNNNNSNA 300
           VP++CLKPP        P +TT+ +    SF       T P  S   +S  Y   +NS  
Sbjct: 241 VPNHCLKPP--------PEATTTQNQAGASF-------TTPVAS--KASEPYGGFSNSYF 300

Query: 301 GYGSVMDESNCSNDGVVWDKQQNWESNSDELSAIINS--SSSSSMVAENGAFHPFTNSSY 333
             G +M                + E  S +LSA+I +  ++++SM  E+          Y
Sbjct: 301 EDGEMM-------------MMNHHEFGSCDLSAMITNYGAAAASMSMED----------Y 336

[Close]
BLAST of Cla021720 vs. Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-28
Identity = 82/189 (43.39%), Postives = 97/189 (51.32%), Query Frame = 1 

Query: 51  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYS 110
           RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTA EAALAYDRAA SM+GT+ARTNF+YS
Sbjct: 19  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEAALAYDRAARSMRGTRARTNFVYS 78

Query: 111 DTSTFHSLLTAFDVQTLLPNSDHSNSKLQQTPSPITIPINQNNNISFAQSQPSIPETSSN 170
           D     S+ +        P            P P   P N   +     +Q S  ++   
Sbjct: 79  DMPPSSSVTSIVSPDDPPP-----------PPPPPAPPSNDPVDYMMMFNQYSSTDSPML 138

Query: 171 PSVHDDHDSNFFFSNDSNSGYLSCIVPDNCLKP-PSDSKHK--TQPSSTTSNDLQKFSFF 230
               D  DS  F  + S++ Y       N L P PSD  +   +QP  T + D     + 
Sbjct: 139 QPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPLPSDLSNSCYSQPQWTWTGDDYSSEYV 196

Query: 231 TSNSIETLP 237
            S     +P
Sbjct: 199 HSPMFSRMP 196

[Close]
BLAST of Cla021720 vs. Swiss-Prot
Match: ERF87_ARATH (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF087 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-25
Identity = 66/137 (48.18%), Postives = 86/137 (62.77%), Query Frame = 1 

Query: 29  NSSPISQSGGERRGRRKQAEPG--------RFLGVRRRPWGRYAAEIRDPTTKERHWLGT 88
           N+   S+S    R +++Q +P         +++GVRRRPWGRYAAEIR+PTTKER+WLGT
Sbjct: 8   NAGSCSRSKKSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGT 67

Query: 89  FDTAHEAALAYDRAALSMKGTQARTNFIYSDT---STFHSLLTAFDVQTLLPNSDHSNSK 148
           FDTA EAALAYDRAA S++G  ARTNF+YSD    S+  S ++  + Q  +    +  S+
Sbjct: 68  FDTAEEAALAYDRAARSIRGLTARTNFVYSDMPRGSSVTSFVSPDESQRFISELFNPPSQ 127

Query: 149 LQQTPSPITIPINQNNN 155
           L+ T S      N NNN
Sbjct: 128 LEATNS------NNNNN 138

[Close]
BLAST of Cla021720 vs. Swiss-Prot
Match: ERF88_ARATH (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF088 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-22
Identity = 62/133 (46.62%), Postives = 81/133 (60.90%), Query Frame = 1 

Query: 35  QSGGERRGRR-KQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDR 94
           +S  +R+ +  K+ + G++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTA EAA AYD 
Sbjct: 3   KSSNKRKSKEEKKLQEGKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDV 62

Query: 95  AALSMKGTQARTNFIYSDTSTFHSLLTAFDVQTLLPNSDHSNSK---LQQTPSPITIPIN 154
           AA S+ G+ A TNF Y++ ++    L     Q+L P+    +S    LQ  P      + 
Sbjct: 63  AARSISGSLATTNFFYTENTS----LERHPQQSLEPHMTWGSSSLCLLQDQPFENNHFVA 122

Query: 155 QNNNISFAQSQPS 164
              + SF+Q Q S
Sbjct: 123 DPISSSFSQKQES 131

[Close]
BLAST of Cla021720 vs. Swiss-Prot
Match: ESR2_ARATH (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.9e-22
Identity = 75/200 (37.50%), Postives = 100/200 (50.00%), Query Frame = 1 

Query: 51  RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYS 110
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTA EAA AYD AA +M+G +ARTNF+Y 
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYP 116

Query: 111 DTS--TFHSLLTAFDVQTLLPNSDHSNSKLQQTPSPITI----PINQNN----------N 170
             S  ++H  + +     +    D  NS   Q+ SP+T     P N +N          N
Sbjct: 117 MPSLDSYHHRIFSSPPMNMFLLRDVLNS---QSLSPLTTFAYPPCNLSNVNDVVHESFTN 176

Query: 171 ISFAQSQPSIPETSSNPSVHDDHDSNFFFSNDSNSGYLSCIVPDNCLKPPSDSKHKTQPS 230
           ++      S     S+   ++   SN F    ++SG L  IV     KP   S+H + P 
Sbjct: 177 VNDVCEDLSPKAKRSSTIENESLISNIFEPEPASSGLLQEIVQGFLPKP--ISQHASIPP 236

Query: 231 STTSNDLQKFSFFTSNSIET 235
            +    +  F     +  +T
Sbjct: 237 KSNQQSVGVFPTMPESGFQT 251

[Close]
BLAST of Cla021720 vs. TrEMBL
Match: A0A0A0LAJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G152130 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 1.8e-151
Identity = 286/349 (81.95%), Postives = 302/349 (86.53%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           MATSKASDKGYPIYETGQSQMGFAL+QRN SPISQ+GGERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MATSKASDKGYPIYETGQSQMGFALLQRNPSPISQNGGERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT
Sbjct: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120

Query: 121 AFDVQT-LLPNSDHSNSKLQQ-TPSPITIPINQ-NNNISFAQSQPSIPETSSNPSVHDDH 180
           AFDVQT LLPNSDHS+SKLQQ TPSP+T P NQ NNNISFAQSQ      + NPSV DDH
Sbjct: 121 AFDVQTNLLPNSDHSHSKLQQITPSPVTTPNNQNNNNISFAQSQ------ALNPSVIDDH 180

Query: 181 DSNFFFSNDSNSGYLSCIVPDNCLKPPSDSKHKTQP----SSTTSNDLQKFSFFTSNSIE 240
           DSNFFFSNDSNSGYLSCIVPDNCLKPPSDS +KTQP    SST SNDL+KFSFF SNSIE
Sbjct: 181 DSNFFFSNDSNSGYLSCIVPDNCLKPPSDSNYKTQPKNIHSSTASNDLKKFSFFASNSIE 240

Query: 241 TLPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQNWESNSDELSAIIN-S 300
           TLPF+ LDV S      NN++ GYGSVM+E           +Q+ W+SN DELSAIIN S
Sbjct: 241 TLPFEGLDVYS------NNNSGGYGSVMEE-----------QQEIWDSNGDELSAIINSS 300

Query: 301 SSSSSMVAENGAFHPFTNSSYGGLLPQSSTCSPSAPSFGDAFDFGYTLL 342
           SSSSSMV ENG FHPF N+SYGGLLPQSSTCSPSAPSFG+AFDFGYTLL
Sbjct: 301 SSSSSMVGENGGFHPFMNTSYGGLLPQSSTCSPSAPSFGEAFDFGYTLL 326

[Close]
BLAST of Cla021720 vs. TrEMBL
Match: M5XJG8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023203mg PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 4.3e-84
Identity = 192/365 (52.60%), Postives = 239/365 (65.48%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           M+TSK SDK +  +E GQ+QMGFA + + ++P SQSG ERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MSTSKTSDKPFKAHEQGQAQMGFASVLQRNTPPSQSG-ERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDP+TKERHWLGTFDTA EAALAYDRAALSMKG+QARTNFIYSD +TFHSLLT
Sbjct: 61  GRYAAEIRDPSTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFIYSDNTTFHSLLT 120

Query: 121 AFDVQTLLPNSDHSNSKLQQTPSPITIPINQNNNISFAQSQ-PSI---------PETSSN 180
            FD+Q LLP      S  +Q P+    P +Q+      Q+Q P+I          ETS  
Sbjct: 121 PFDLQNLLPQQSQFFSAAKQQPTNHNSPPHQSGIFQNDQTQNPNIRSNNINTCGAETSRG 180

Query: 181 PSVHDDHDSNFFFSN--DSNSGYLSCIVPDNCLKPPSDS-KHKTQPSSTTSNDL---QKF 240
            S HD  D +FFFSN  +SNSGYL+CIVPDNCL+PPS+S  H T   S+ ++D    Q  
Sbjct: 181 SSAHDGDDDDFFFSNGSNSNSGYLACIVPDNCLRPPSESDHHATNHRSSKTSDFNIDQDC 240

Query: 241 SFFTSNSIETLPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQN-WESNS 300
           SF  +NSIET     LDV ++      ++ +  G  +   +  + G  WD QQ  WE +S
Sbjct: 241 SFANTNSIET-KSHCLDVMNVQAALMASNTSPSGDQLPSFDGFSHG-FWDNQQPIWELHS 300

Query: 301 DELS-AIINSSSSSSMVAENGAFHPFTNSSYGGLLPQSST------CSPSAPSFGDA-FD 341
            ELS A++++          GA +P   +S  GL+PQ++T      CSPS P FGDA F+
Sbjct: 301 RELSAAMVDNPFMIEDGCMGGALYPIVENSSFGLIPQATTSPSSFSCSPSVPPFGDAVFE 360

[Close]
BLAST of Cla021720 vs. TrEMBL
Match: A0A061EQ20_THECC (AP2/ERF domain-containing transcription factor, putative OS=Theobroma cacao GN=TCM_021164 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 5.5e-79
Identity = 182/358 (50.84%), Postives = 223/358 (62.29%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           M+TSK  DK +  YE  Q+Q GFAL+QRN+SP     GERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MSTSKTLDKPFG-YEPVQTQAGFALLQRNTSP--SQPGERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDPTTKERHWLGTFDTA EAALAYDRAALSMKGTQARTNF+YSD +TFHSLLT
Sbjct: 61  GRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGTQARTNFLYSDNTTFHSLLT 120

Query: 121 AFDVQTLLPNSD-----------HSNSKLQQTPSPITIPINQNNNISFAQSQPSIPETSS 180
            FDVQ +LP S            + NS  Q   S    PI  NN+ S A   P       
Sbjct: 121 PFDVQAILPTSQFLTSSQPKQATNHNSAPQPDISHSKTPIQSNNDPSSADETP------- 180

Query: 181 NPSVHDDHDSNFFFSNDSNSGYLSCIVPDNCLKPPS--DSKHKTQPSSTTSNDLQKFSFF 240
                   D++FF S D+NSGYL+C+VPDNCLKPPS   S   +   S + N  +  S F
Sbjct: 181 ---YGSVDDNSFFLSGDTNSGYLACVVPDNCLKPPSTPTSPRVSNFCSMSQNFRENQSHF 240

Query: 241 TSNSIETLPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQNWESNSDELS 300
            + ++        D++S+   ++N    G+  +       N G  W  QQ+WE NS+ELS
Sbjct: 241 DNYALPP------DITSLP-KSDNMEFPGFDEL-------NQG-FWSDQQSWEMNSNELS 300

Query: 301 AIINSSSSSSMVAEN---GAFHPFTNSSYGGLLPQ---SSTCSPSAPSFGDAFDFGYT 340
           A+IN      ++ E+   GA +P+ +S+   ++PQ   S TCSPS P FGD  DFGY+
Sbjct: 301 AMIN----PPLLVEDGCMGASYPYNDSASYNMIPQATSSVTCSPSMPPFGDVVDFGYS 326

[Close]
BLAST of Cla021720 vs. TrEMBL
Match: A5B1K7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003244 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.3e-77
Identity = 182/362 (50.28%), Postives = 220/362 (60.77%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           M++SK  DK     +    Q GF+LIQRN+S    +  ERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MSSSKTLDKPLRGLDPSLVQAGFSLIQRNTSTTQPN--ERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDPTTKERHWLGTFDTA EAALAYDRAALSMKGTQARTNFIYSD +TFHSLLT
Sbjct: 61  GRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGTQARTNFIYSDNTTFHSLLT 120

Query: 121 AFDVQTLLP------------NSDHSNSKLQQTPSPITIPINQNNNISFAQSQPSIPETS 180
            FDVQTLLP             S+H+ S    T      P   NN    AQ+    P +S
Sbjct: 121 PFDVQTLLPPSQFLTANHTKQPSNHNTSCHPHTSQSDQTPTQSNNIEVCAQTSYETPLSS 180

Query: 181 SNPSVHDDHDSNFFFSNDSNSGYLSCIVPDNCLKPPSDS---KHKTQPSSTTS--NDLQK 240
           +N      + S+FFFS DSNSGYL CIVPDNCL PPS +    H    S+T+S  N   K
Sbjct: 181 NN------NTSSFFFSTDSNSGYLGCIVPDNCLNPPSSATGLNHNNSNSNTSSDQNFCSK 240

Query: 241 FSFFTSNSIETLPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQNWESNS 300
            + F    ++     +L + ++     N ++ G     DE +    G  W  +Q+WE NS
Sbjct: 241 STSFPETELQCGGSNTLPIDAV-----NAASPGDFPSFDELS----GGFWGNEQSWELNS 300

Query: 301 DELSAIINSSSSSSMVAEN--GAFHPFTNSSYGGLLPQ---SSTCSPSAPSFGDAFDFGY 341
            ELSA+IN   +  MV +   GA +P  ++   G++ Q   S TCSPS P FGD  D GY
Sbjct: 301 SELSAMIN---NPLMVEDGCMGALYPMMDNPTYGVMSQAAASVTCSPSLPPFGDVVDLGY 342

[Close]
BLAST of Cla021720 vs. TrEMBL
Match: B9N4Z9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s22750g PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.3e-77
Identity = 177/360 (49.17%), Postives = 218/360 (60.56%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           M+TSK  DK    Y+T     GFAL+QRN++P     GERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MSTSKTFDKPLEGYDTLNIHAGFALLQRNTTP--PQTGERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNF YSD +TFHSLLT
Sbjct: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFNYSDNTTFHSLLT 120

Query: 121 AFDVQTLLPNSDH-SNSKLQQTPSPITIPINQNNNISFAQSQPSIPETSSNPSVHDDHD- 180
            FD+Q  LP S   +N++++Q       P NQ++ +     Q   P  SS+ +  +  D 
Sbjct: 121 PFDIQAFLPQSQFLTNTQIKQ-------PTNQSSPVKLETCQNMTPNQSSSDTYAESSDG 180

Query: 181 -----SNFFFSN-DSNSGYLSCIVPDNCLKPPSDSKHKTQPSSTTSNDLQKFSFFTSNSI 240
                ++FFFSN DSNSGYL CIVPDNCL+PP  S       S  SND    S   S S+
Sbjct: 181 SAHETNSFFFSNEDSNSGYLGCIVPDNCLRPPPSSTSSKTTKSNASNDQYSCSMTASTSL 240

Query: 241 E--------TLPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQNWESNSD 300
           E          P +  +V + AY   N          DE N       W  Q +W+ NS 
Sbjct: 241 EDHSQCNKYAPPLEITNVPTKAYTPGNFPG------FDELNHG----FWGDQLSWDGNSG 300

Query: 301 ELSAIINSSSSSSMVAENGAFHPFTNSSYGGLLPQS----STCSPSAPSFGDAFDFGYTL 341
           +LSA++N+      V  +  +      +Y GL+PQ+    S+ S S P++GDA +FGY+L
Sbjct: 301 DLSAMMNNPLMVENVCMDTLYSVDNPPTY-GLMPQATSSVSSSSLSYPAYGDAVNFGYSL 340

[Close]
BLAST of Cla021720 vs. NCBI nr
Match: gi|659076710|ref|XP_008438827.1| (PREDICTED: ethylene-responsive transcription factor ERF086 [Cucumis melo])

HSP 1 Score: 554.7 bits (1428), Expect = 1.1e-154
Identity = 290/347 (83.57%), Postives = 302/347 (87.03%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           MATSKASDKGYPIYETGQSQMGFAL+QRNSSPISQ+GGERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MATSKASDKGYPIYETGQSQMGFALLQRNSSPISQNGGERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT
Sbjct: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120

Query: 121 AFDVQT-LLPNSDHSNSKLQQTPSPITIPINQ-NNNISFAQSQPSIPETSSNPSVHDDHD 180
           AFDVQT LLPNSDHS+SKLQQ   PIT P NQ NNNISFAQSQ      + NPSV DDHD
Sbjct: 121 AFDVQTNLLPNSDHSHSKLQQITPPITTPNNQHNNNISFAQSQ------ALNPSVIDDHD 180

Query: 181 SNFFFSNDSNSGYLSCIVPDNCLKPPSDSKHKTQP----SSTTSNDLQKFSFFTSNSIET 240
           SNFFFSNDSNSGYLSCIVPDNCLKPPSDS +KTQP    SSTTSNDL+KFSFF SNSIET
Sbjct: 181 SNFFFSNDSNSGYLSCIVPDNCLKPPSDSNYKTQPKNIHSSTTSNDLKKFSFFASNSIET 240

Query: 241 LPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQNWESNSDELSAIINSSS 300
           LPF+ LDV    YNNNN  N GYGSVM+E           +Q+ WESN DELSAIINSSS
Sbjct: 241 LPFEGLDV----YNNNN--NGGYGSVMEE-----------QQEIWESNGDELSAIINSSS 300

Query: 301 SSSMVAENGAFHPFTNSSYGGLLPQSSTCSPSAPSFGDAFDFGYTLL 342
           SSSMV ENG FHPF N+SYGGLLPQSSTCSPSAPSFG+AFDFGYTLL
Sbjct: 301 SSSMVGENGGFHPFMNTSYGGLLPQSSTCSPSAPSFGEAFDFGYTLL 324

[Close]
BLAST of Cla021720 vs. NCBI nr
Match: gi|449433379|ref|XP_004134475.1| (PREDICTED: ethylene-responsive transcription factor ERF086 [Cucumis sativus])

HSP 1 Score: 543.5 bits (1399), Expect = 2.6e-151
Identity = 286/349 (81.95%), Postives = 302/349 (86.53%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           MATSKASDKGYPIYETGQSQMGFAL+QRN SPISQ+GGERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MATSKASDKGYPIYETGQSQMGFALLQRNPSPISQNGGERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT
Sbjct: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120

Query: 121 AFDVQT-LLPNSDHSNSKLQQ-TPSPITIPINQ-NNNISFAQSQPSIPETSSNPSVHDDH 180
           AFDVQT LLPNSDHS+SKLQQ TPSP+T P NQ NNNISFAQSQ      + NPSV DDH
Sbjct: 121 AFDVQTNLLPNSDHSHSKLQQITPSPVTTPNNQNNNNISFAQSQ------ALNPSVIDDH 180

Query: 181 DSNFFFSNDSNSGYLSCIVPDNCLKPPSDSKHKTQP----SSTTSNDLQKFSFFTSNSIE 240
           DSNFFFSNDSNSGYLSCIVPDNCLKPPSDS +KTQP    SST SNDL+KFSFF SNSIE
Sbjct: 181 DSNFFFSNDSNSGYLSCIVPDNCLKPPSDSNYKTQPKNIHSSTASNDLKKFSFFASNSIE 240

Query: 241 TLPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQNWESNSDELSAIIN-S 300
           TLPF+ LDV S      NN++ GYGSVM+E           +Q+ W+SN DELSAIIN S
Sbjct: 241 TLPFEGLDVYS------NNNSGGYGSVMEE-----------QQEIWDSNGDELSAIINSS 300

Query: 301 SSSSSMVAENGAFHPFTNSSYGGLLPQSSTCSPSAPSFGDAFDFGYTLL 342
           SSSSSMV ENG FHPF N+SYGGLLPQSSTCSPSAPSFG+AFDFGYTLL
Sbjct: 301 SSSSSMVGENGGFHPFMNTSYGGLLPQSSTCSPSAPSFGEAFDFGYTLL 326

[Close]
BLAST of Cla021720 vs. NCBI nr
Match: gi|645233051|ref|XP_008223158.1| (PREDICTED: ethylene-responsive transcription factor ERF086 [Prunus mume])

HSP 1 Score: 321.2 bits (822), Expect = 2.1e-84
Identity = 196/370 (52.97%), Postives = 234/370 (63.24%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           M+TSK SDK +  YE GQ+QMGFA + + S+P SQSG ERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MSTSKTSDKPFKAYEQGQAQMGFASVLQRSTPPSQSG-ERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDP+TKERHWLGTFDTA EAALAYDRAALSMKG+QARTNFIYSD +TFHSLLT
Sbjct: 61  GRYAAEIRDPSTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFIYSDNTTFHSLLT 120

Query: 121 AFDVQTLLPNSDHSNSKLQQTPSPITIPINQNNNISFAQSQ-PSI---------PETSSN 180
            FD+QTLLP      S  +Q P+    P  Q+      Q+Q P+I          ETS  
Sbjct: 121 PFDLQTLLPQQSQFFSAAKQQPTNHNSPPRQSGIFQNDQTQNPNIRSNNINTCGAETSHG 180

Query: 181 PSVHDDHDSNFFFSN--DSNSGYLSCIVPDNCLKPPSDS-KHKTQPSSTTSNDL---QKF 240
            S HD  D  FFFSN  +SNSGYL+CIVPDNCL+PPS+S  H T   S+ ++D    Q  
Sbjct: 181 SSAHDGDDDGFFFSNGSNSNSGYLACIVPDNCLRPPSESDHHATNHRSSKTSDFNIDQDC 240

Query: 241 SFFTSNSIET----LPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQN-W 300
           SF  +NSIET    L   ++  + MA N N       G  +   +  + G  WD QQ  W
Sbjct: 241 SFANTNSIETKSHCLDVMNVQAALMASNTNPP-----GDQLPSFDGFSHG-FWDNQQPIW 300

Query: 301 ESNSDELSA--IINSSSSSSMVAENGAFHPFTNSSYGGLLPQSST------CSPSAPSFG 341
           E +S ELSA  + N           G  +P   +S  GL+PQ++T      CSPS P FG
Sbjct: 301 ELHSRELSAAMVDNPFMIEDGCMGGGGLYPIVENSSFGLIPQATTSSSSFSCSPSVPPFG 360

[Close]
BLAST of Cla021720 vs. NCBI nr
Match: gi|596241598|ref|XP_007224487.1| (hypothetical protein PRUPE_ppa023203mg [Prunus persica])

HSP 1 Score: 319.7 bits (818), Expect = 6.2e-84
Identity = 192/365 (52.60%), Postives = 239/365 (65.48%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           M+TSK SDK +  +E GQ+QMGFA + + ++P SQSG ERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MSTSKTSDKPFKAHEQGQAQMGFASVLQRNTPPSQSG-ERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDP+TKERHWLGTFDTA EAALAYDRAALSMKG+QARTNFIYSD +TFHSLLT
Sbjct: 61  GRYAAEIRDPSTKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFIYSDNTTFHSLLT 120

Query: 121 AFDVQTLLPNSDHSNSKLQQTPSPITIPINQNNNISFAQSQ-PSI---------PETSSN 180
            FD+Q LLP      S  +Q P+    P +Q+      Q+Q P+I          ETS  
Sbjct: 121 PFDLQNLLPQQSQFFSAAKQQPTNHNSPPHQSGIFQNDQTQNPNIRSNNINTCGAETSRG 180

Query: 181 PSVHDDHDSNFFFSN--DSNSGYLSCIVPDNCLKPPSDS-KHKTQPSSTTSNDL---QKF 240
            S HD  D +FFFSN  +SNSGYL+CIVPDNCL+PPS+S  H T   S+ ++D    Q  
Sbjct: 181 SSAHDGDDDDFFFSNGSNSNSGYLACIVPDNCLRPPSESDHHATNHRSSKTSDFNIDQDC 240

Query: 241 SFFTSNSIETLPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQN-WESNS 300
           SF  +NSIET     LDV ++      ++ +  G  +   +  + G  WD QQ  WE +S
Sbjct: 241 SFANTNSIET-KSHCLDVMNVQAALMASNTSPSGDQLPSFDGFSHG-FWDNQQPIWELHS 300

Query: 301 DELS-AIINSSSSSSMVAENGAFHPFTNSSYGGLLPQSST------CSPSAPSFGDA-FD 341
            ELS A++++          GA +P   +S  GL+PQ++T      CSPS P FGDA F+
Sbjct: 301 RELSAAMVDNPFMIEDGCMGGALYPIVENSSFGLIPQATTSPSSFSCSPSVPPFGDAVFE 360

[Close]
BLAST of Cla021720 vs. NCBI nr
Match: gi|590660896|ref|XP_007035521.1| (AP2/ERF domain-containing transcription factor, putative [Theobroma cacao])

HSP 1 Score: 302.8 bits (774), Expect = 7.8e-79
Identity = 182/358 (50.84%), Postives = 223/358 (62.29%), Query Frame = 1 

Query: 1   MATSKASDKGYPIYETGQSQMGFALIQRNSSPISQSGGERRGRRKQAEPGRFLGVRRRPW 60
           M+TSK  DK +  YE  Q+Q GFAL+QRN+SP     GERRGRRKQAEPGRFLGVRRRPW
Sbjct: 1   MSTSKTLDKPFG-YEPVQTQAGFALLQRNTSP--SQPGERRGRRKQAEPGRFLGVRRRPW 60

Query: 61  GRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMKGTQARTNFIYSDTSTFHSLLT 120
           GRYAAEIRDPTTKERHWLGTFDTA EAALAYDRAALSMKGTQARTNF+YSD +TFHSLLT
Sbjct: 61  GRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGTQARTNFLYSDNTTFHSLLT 120

Query: 121 AFDVQTLLPNSD-----------HSNSKLQQTPSPITIPINQNNNISFAQSQPSIPETSS 180
            FDVQ +LP S            + NS  Q   S    PI  NN+ S A   P       
Sbjct: 121 PFDVQAILPTSQFLTSSQPKQATNHNSAPQPDISHSKTPIQSNNDPSSADETP------- 180

Query: 181 NPSVHDDHDSNFFFSNDSNSGYLSCIVPDNCLKPPS--DSKHKTQPSSTTSNDLQKFSFF 240
                   D++FF S D+NSGYL+C+VPDNCLKPPS   S   +   S + N  +  S F
Sbjct: 181 ---YGSVDDNSFFLSGDTNSGYLACVVPDNCLKPPSTPTSPRVSNFCSMSQNFRENQSHF 240

Query: 241 TSNSIETLPFKSLDVSSMAYNNNNNSNAGYGSVMDESNCSNDGVVWDKQQNWESNSDELS 300
            + ++        D++S+   ++N    G+  +       N G  W  QQ+WE NS+ELS
Sbjct: 241 DNYALPP------DITSLP-KSDNMEFPGFDEL-------NQG-FWSDQQSWEMNSNELS 300

Query: 301 AIINSSSSSSMVAEN---GAFHPFTNSSYGGLLPQ---SSTCSPSAPSFGDAFDFGYT 340
           A+IN      ++ E+   GA +P+ +S+   ++PQ   S TCSPS P FGD  DFGY+
Sbjct: 301 AMIN----PPLLVEDGCMGASYPYNDSASYNMIPQATSSVTCSPSMPPFGDVVDFGYS 326

The following BLAST results are available for this feature:
BLAST of Cla021720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF86_ARATH1.3e-5441.16Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana GN=ERF08... [more]
LEP_ARATH1.7e-2843.39Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2... [more]
ERF87_ARATH2.9e-2548.18Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana GN=ERF08... [more]
ERF88_ARATH1.8e-2246.62Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana GN=ERF08... [more]
ESR2_ARATH3.9e-2237.50Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE... [more]
BLAST of Cla021720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAJ6_CUCSA1.8e-15181.95Uncharacterized protein OS=Cucumis sativus GN=Csa_3G152130 PE=4 SV=1[more]
M5XJG8_PRUPE4.3e-8452.60Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023203mg PE=4 SV=1[more]
A0A061EQ20_THECC5.5e-7950.84AP2/ERF domain-containing transcription factor, putative OS=Theobroma cacao GN=T... [more]
A5B1K7_VITVI1.3e-7750.28Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003244 PE=4 SV=1[more]
B9N4Z9_POPTR2.3e-7749.17Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s22750g PE=4 SV=1[more]
BLAST of Cla021720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076710|ref|XP_008438827.1|1.1e-15483.57PREDICTED: ethylene-responsive transcription factor ERF086 [Cucumis melo][more]
gi|449433379|ref|XP_004134475.1|2.6e-15181.95PREDICTED: ethylene-responsive transcription factor ERF086 [Cucumis sativus][more]
gi|645233051|ref|XP_008223158.1|2.1e-8452.97PREDICTED: ethylene-responsive transcription factor ERF086 [Prunus mume][more]
gi|596241598|ref|XP_007224487.1|6.2e-8452.60hypothetical protein PRUPE_ppa023203mg [Prunus persica][more]
gi|590660896|ref|XP_007035521.1|7.8e-7950.84AP2/ERF domain-containing transcription factor, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048513 animal organ development
biological_process GO:0009908 flower development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009791 post-embryonic development
biological_process GO:0048367 shoot system development
biological_process GO:0006629 lipid metabolic process
biological_process GO:0048731 system development
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU48151watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021720Cla021720.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU48151WMU48151transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 74..90
score: 2.3E-7coord: 52..63
score: 2.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 52..108
score: 7.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 54..100
score: 9.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 51..114
score: 8.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 51..108
score: 20
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 52..109
score: 5.62
NoneNo IPR availablePANTHERPTHR31677FAMILY NOT NAMEDcoord: 12..338
score: 1.7
NoneNo IPR availablePANTHERPTHR31677:SF22SUBFAMILY NOT NAMEDcoord: 12..338
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla021720Cla97C05G087400Watermelon (97103) v2wmwmbB206
Cla021720Csa3G152130Cucumber (Chinese Long) v2cuwmB233
Cla021720MELO3C006626Melon (DHL92) v3.5.1mewmB461
Cla021720CSPI03G14100Wild cucumber (PI 183967)cpiwmB231
Cla021720Cucsa.253400Cucumber (Gy14) v1cgywmB479
Cla021720CmaCh06G014820Cucurbita maxima (Rimu)cmawmB798
Cla021720CmoCh06G014780Cucurbita moschata (Rifu)cmowmB793
Cla021720CmoCh14G016730Cucurbita moschata (Rifu)cmowmB231
Cla021720Lsi05G015200Bottle gourd (USVL1VR-Ls)lsiwmB362
Cla021720Cp4.1LG03g11260Cucurbita pepo (Zucchini)cpewmB613
Cla021720Cp4.1LG08g04790Cucurbita pepo (Zucchini)cpewmB845
Cla021720CsGy3G014220Cucumber (Gy14) v2cgybwmB217
Cla021720MELO3C006626.2Melon (DHL92) v3.6.1medwmB447
Cla021720Carg17358Silver-seed gourdcarwmB0603
Cla021720Carg20125Silver-seed gourdcarwmB0834
Cla021720CsaV3_3G014320Cucumber (Chinese Long) v3cucwmB239
Cla021720Bhi01G000694Wax gourdwgowmB201
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla021720Cucumber (Gy14) v1cgywmB327
Cla021720Cucurbita maxima (Rimu)cmawmB345
Cla021720Cucurbita maxima (Rimu)cmawmB242
Cla021720Cucurbita maxima (Rimu)cmawmB344
Cla021720Cucurbita maxima (Rimu)cmawmB869
Cla021720Cucurbita moschata (Rifu)cmowmB341
Cla021720Cucurbita moschata (Rifu)cmowmB856
Cla021720Melon (DHL92) v3.5.1mewmB096
Cla021720Watermelon (Charleston Gray)wcgwmB286
Cla021720Watermelon (Charleston Gray)wcgwmB332
Cla021720Cucumber (Chinese Long) v2cuwmB499
Cla021720Cucumber (Chinese Long) v2cuwmB588
Cla021720Cucurbita pepo (Zucchini)cpewmB152
Cla021720Cucurbita pepo (Zucchini)cpewmB153
Cla021720Cucurbita pepo (Zucchini)cpewmB329
Cla021720Bottle gourd (USVL1VR-Ls)lsiwmB017
Cla021720Cucumber (Gy14) v2cgybwmB466
Cla021720Cucumber (Gy14) v2cgybwmB552
Cla021720Melon (DHL92) v3.6.1medwmB094
Cla021720Silver-seed gourdcarwmB0070
Cla021720Silver-seed gourdcarwmB0316
Cla021720Cucumber (Chinese Long) v3cucwmB523
Cla021720Watermelon (97103) v2wmwmbB217
Cla021720Wax gourdwgowmB069
Cla021720Watermelon (97103) v1wmwmB022
Cla021720Watermelon (97103) v1wmwmB138