Cp4.1LG03g11260 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG03g11260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionEthylene-responsive transcription factor ERF086
LocationCp4.1LG03 : 11106702 .. 11107202 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTACTCCAAATCCAAACAAGAACAACAAGAACAATAACATCCCATTTACTCAATCTCTGCCCTCAAATCCCTGTTTTGAAAATCTTGACACCAATTTCTTGTTCTCTAATGATTCAAACTCAGGTTACTTGAGCTGCATTGTTCCTGATAATTGCTTGAAACCCCCTTCAGATTCCACTACTTCAAATGATCTTCAAAAGTTGAGCTTCTTTGCCTCAAACTCCATTGATTCACAAGGTCTGGATGGTTCAGCCATGGCTTATAACAGTTCAAATGATGGAGTTTGGGATGAACAGCAAATTTGGATGAGTAATGGTGATGAACTCTCAGCTATAATCAATAGCTCCTCTTCTTCCTCATCCATGGTGGCTGAAAATGGAGATTTTCATCCATTTATGAACAGTTCTTATGGTGGTTTGTTGCCTCAGTCTTCTACTTGCTCTACTTATGCTCCTCCTTTAGGCGATGTGTTTGATTTTGGGTATCCATTACTTTGA

mRNA sequence

ATGGTTACTCCAAATCCAAACAAGAACAACAAGAACAATAACATCCCATTTACTCAATCTCTGCCCTCAAATCCCTGTTTTGAAAATCTTGACACCAATTTCTTGTTCTCTAATGATTCAAACTCAGGTTACTTGAGCTGCATTGTTCCTGATAATTGCTTGAAACCCCCTTCAGATTCCACTACTTCAAATGATCTTCAAAAGTTGAGCTTCTTTGCCTCAAACTCCATTGATTCACAAGGTCTGGATGGTTCAGCCATGGCTTATAACAGTTCAAATGATGGAGTTTGGGATGAACAGCAAATTTGGATGAGTAATGGTGATGAACTCTCAGCTATAATCAATAGCTCCTCTTCTTCCTCATCCATGGTGGCTGAAAATGGAGATTTTCATCCATTTATGAACAGTTCTTATGGTGGTTTGTTGCCTCAGTCTTCTACTTGCTCTACTTATGCTCCTCCTTTAGGCGATGTGTTTGATTTTGGGTATCCATTACTTTGA

Coding sequence (CDS)

ATGGTTACTCCAAATCCAAACAAGAACAACAAGAACAATAACATCCCATTTACTCAATCTCTGCCCTCAAATCCCTGTTTTGAAAATCTTGACACCAATTTCTTGTTCTCTAATGATTCAAACTCAGGTTACTTGAGCTGCATTGTTCCTGATAATTGCTTGAAACCCCCTTCAGATTCCACTACTTCAAATGATCTTCAAAAGTTGAGCTTCTTTGCCTCAAACTCCATTGATTCACAAGGTCTGGATGGTTCAGCCATGGCTTATAACAGTTCAAATGATGGAGTTTGGGATGAACAGCAAATTTGGATGAGTAATGGTGATGAACTCTCAGCTATAATCAATAGCTCCTCTTCTTCCTCATCCATGGTGGCTGAAAATGGAGATTTTCATCCATTTATGAACAGTTCTTATGGTGGTTTGTTGCCTCAGTCTTCTACTTGCTCTACTTATGCTCCTCCTTTAGGCGATGTGTTTGATTTTGGGTATCCATTACTTTGA

Protein sequence

MVTPNPNKNNKNNNIPFTQSLPSNPCFENLDTNFLFSNDSNSGYLSCIVPDNCLKPPSDSTTSNDLQKLSFFASNSIDSQGLDGSAMAYNSSNDGVWDEQQIWMSNGDELSAIINSSSSSSSMVAENGDFHPFMNSSYGGLLPQSSTCSTYAPPLGDVFDFGYPLL
BLAST of Cp4.1LG03g11260 vs. TrEMBL
Match: A0A0A0LAJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G152130 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.2e-48
Identity = 116/185 (62.70%), Postives = 132/185 (71.35%), Query Frame = 1

Query: 2   VTPNP---NKNNKNNNIPFTQSLPSNPC-FENLDTNFLFSNDSNSGYLSCIVPDNCLKPP 61
           +TP+P     N  NNNI F QS   NP   ++ D+NF FSNDSNSGYLSCIVPDNCLKPP
Sbjct: 142 ITPSPVTTPNNQNNNNISFAQSQALNPSVIDDHDSNFFFSNDSNSGYLSCIVPDNCLKPP 201

Query: 62  SDS------------TTSNDLQKLSFFASNSIDSQGLDGSAMAYNSSNDG---VWDEQQ- 121
           SDS            T SNDL+K SFFASNSI++   +G  +  N+++ G   V +EQQ 
Sbjct: 202 SDSNYKTQPKNIHSSTASNDLKKFSFFASNSIETLPFEGLDVYSNNNSGGYGSVMEEQQE 261

Query: 122 IWMSNGDELSAIINSSSSSSSMVAENGDFHPFMNSSYGGLLPQSSTCSTYAPPLGDVFDF 167
           IW SNGDELSAIINSSSSSSSMV ENG FHPFMN+SYGGLLPQSSTCS  AP  G+ FDF
Sbjct: 262 IWDSNGDELSAIINSSSSSSSMVGENGGFHPFMNTSYGGLLPQSSTCSPSAPSFGEAFDF 321

BLAST of Cp4.1LG03g11260 vs. TrEMBL
Match: A0A061EQ20_THECC (AP2/ERF domain-containing transcription factor, putative OS=Theobroma cacao GN=TCM_021164 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-14
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 1

Query: 11  KNNNIPFTQSLPSNPCFENLDTNFLFSNDSNSGYLSCIVPDNCLKPPSDSTTSNDLQKLS 70
           ++NN P   S    P     D +F  S D+NSGYL+C+VPDNCLKPPS + TS  +    
Sbjct: 158 QSNNDP--SSADETPYGSVDDNSFFLSGDTNSGYLACVVPDNCLKPPS-TPTSPRVSNFC 217

Query: 71  FFASNSIDSQG-LDGSAM----------------AYNSSNDGVWDEQQIWMSNGDELSAI 130
             + N  ++Q   D  A+                 ++  N G W +QQ W  N +ELSA+
Sbjct: 218 SMSQNFRENQSHFDNYALPPDITSLPKSDNMEFPGFDELNQGFWSDQQSWEMNSNELSAM 277

Query: 131 INSSSSSSSMVAENGDF---HPFMNSSYGGLLPQ---SSTCSTYAPPLGDVFDFGY 164
           IN       ++ E+G     +P+ +S+   ++PQ   S TCS   PP GDV DFGY
Sbjct: 278 IN-----PPLLVEDGCMGASYPYNDSASYNMIPQATSSVTCSPSMPPFGDVVDFGY 325

BLAST of Cp4.1LG03g11260 vs. TrEMBL
Match: V7C7U9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G102500g PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-14
Identity = 66/174 (37.93%), Postives = 87/174 (50.00%), Query Frame = 1

Query: 31  DTNFLFSNDSNSGYLSCIVPDNCLKPPSDSTTSNDLQKLSF----FASNSIDS------- 90
           D ++ FS+DSNSGYL CIVPDNC +P S ST S++ +K +       +NSI+S       
Sbjct: 182 DDSYFFSSDSNSGYLECIVPDNCFRPASSSTNSSNSRKSNVSDQKANANSIESTNHHHYS 241

Query: 91  ---------QGLDGSAMAYNSS--------NDGVWDEQQIWMSNGDELSAIINSSSSSSS 150
                    +G++ + MA N S        + G WD+QQ W  N  ELSAI       + 
Sbjct: 242 HVDMTSFSQEGMEMAPMASNFSDFWYPSELSQGSWDDQQSWDWNSSELSAIF-----KNP 301

Query: 151 MVAENG---------DFHPFMNSSYGGL--LPQSSTCSTYAPPLGDVFDFGYPL 166
           +  ENG         D  P  + SYG +     S+TCS   PP GDV D GYPL
Sbjct: 302 LRVENGCMDALYPITDHSPSPSPSYGLMNEAASSTTCSPSLPPFGDV-DLGYPL 349

BLAST of Cp4.1LG03g11260 vs. TrEMBL
Match: M5XJG8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023203mg PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.1e-12
Identity = 71/204 (34.80%), Postives = 97/204 (47.55%), Query Frame = 1

Query: 3   TPNPNKNNKNNNIPFTQSLPSNPCFENLDTNFLFSN--DSNSGYLSCIVPDNCLKPPSDS 62
           T NPN  + N N    ++   +   +  D +F FSN  +SNSGYL+CIVPDNCL+PPS+S
Sbjct: 159 TQNPNIRSNNINTCGAETSRGSSAHDGDDDDFFFSNGSNSNSGYLACIVPDNCLRPPSES 218

Query: 63  ------------TTSNDLQKLSFFASNSI-------DSQGLDGSAMAYNSS--------- 122
                       +  N  Q  SF  +NSI       D   +  + MA N+S         
Sbjct: 219 DHHATNHRSSKTSDFNIDQDCSFANTNSIETKSHCLDVMNVQAALMASNTSPSGDQLPSF 278

Query: 123 ---NDGVWDEQQ-IWMSNGDELSAIINSSSSSSSMVAENGDFHPFMNSSYGGLLPQSST- 166
              + G WD QQ IW  +  ELSA +  +          G  +P + +S  GL+PQ++T 
Sbjct: 279 DGFSHGFWDNQQPIWELHSRELSAAMVDNPFMIEDGCMGGALYPIVENSSFGLIPQATTS 338

BLAST of Cp4.1LG03g11260 vs. TrEMBL
Match: A0A0S3R922_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G525300 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-11
Identity = 58/163 (35.58%), Postives = 79/163 (48.47%), Query Frame = 1

Query: 31  DTNFLFSNDSNSGYLSCIVPDNCLKPPSDSTTSNDLQKLS-------------------F 90
           D +F FS+DSNSGYL CIVPDNC +P S  T S++ +K +                   +
Sbjct: 184 DDSFFFSSDSNSGYLECIVPDNCFRPASSRTNSSNSRKSNVSDQKANTNSSESTNHHEQY 243

Query: 91  FASNSIDSQGLDGSAMAYNSS--NDGVWDEQQIWMSNGDELSAIINS-----SSSSSSMV 150
           + S  +     + S   Y S   + G WD+QQ W  N  ELSAI  +     +    ++ 
Sbjct: 244 YYSQEMAGMASNFSEFCYPSEVMSQGSWDDQQSWDWNCSELSAIFKNPLRVENGCMDALY 303

Query: 151 AENGDFHPFMNSSYGGL--LPQSSTCSTYAPPLGDVFDFGYPL 166
             + D  P  + SYG +     S+TCS   PP GDV D GYPL
Sbjct: 304 PMSDDQSP--SPSYGVMNECASSTTCSPSLPPFGDV-DLGYPL 343

BLAST of Cp4.1LG03g11260 vs. NCBI nr
Match: gi|449433379|ref|XP_004134475.1| (PREDICTED: ethylene-responsive transcription factor ERF086 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 116/185 (62.70%), Postives = 132/185 (71.35%), Query Frame = 1

Query: 2   VTPNP---NKNNKNNNIPFTQSLPSNPC-FENLDTNFLFSNDSNSGYLSCIVPDNCLKPP 61
           +TP+P     N  NNNI F QS   NP   ++ D+NF FSNDSNSGYLSCIVPDNCLKPP
Sbjct: 142 ITPSPVTTPNNQNNNNISFAQSQALNPSVIDDHDSNFFFSNDSNSGYLSCIVPDNCLKPP 201

Query: 62  SDS------------TTSNDLQKLSFFASNSIDSQGLDGSAMAYNSSNDG---VWDEQQ- 121
           SDS            T SNDL+K SFFASNSI++   +G  +  N+++ G   V +EQQ 
Sbjct: 202 SDSNYKTQPKNIHSSTASNDLKKFSFFASNSIETLPFEGLDVYSNNNSGGYGSVMEEQQE 261

Query: 122 IWMSNGDELSAIINSSSSSSSMVAENGDFHPFMNSSYGGLLPQSSTCSTYAPPLGDVFDF 167
           IW SNGDELSAIINSSSSSSSMV ENG FHPFMN+SYGGLLPQSSTCS  AP  G+ FDF
Sbjct: 262 IWDSNGDELSAIINSSSSSSSMVGENGGFHPFMNTSYGGLLPQSSTCSPSAPSFGEAFDF 321

BLAST of Cp4.1LG03g11260 vs. NCBI nr
Match: gi|659076710|ref|XP_008438827.1| (PREDICTED: ethylene-responsive transcription factor ERF086 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 2.9e-47
Identity = 117/187 (62.57%), Postives = 134/187 (71.66%), Query Frame = 1

Query: 1   MVTPNPNKNNKNNNIPFTQSLPSNPC-FENLDTNFLFSNDSNSGYLSCIVPDNCLKPPSD 60
           + TPN   N  NNNI F QS   NP   ++ D+NF FSNDSNSGYLSCIVPDNCLKPPSD
Sbjct: 146 ITTPN---NQHNNNISFAQSQALNPSVIDDHDSNFFFSNDSNSGYLSCIVPDNCLKPPSD 205

Query: 61  ------------STTSNDLQKLSFFASNSIDS---QGLDGSAMAYNSSNDGVW-----DE 120
                       STTSNDL+K SFFASNSI++   +GLD     YN++N+G +     ++
Sbjct: 206 SNYKTQPKNIHSSTTSNDLKKFSFFASNSIETLPFEGLD----VYNNNNNGGYGSVMEEQ 265

Query: 121 QQIWMSNGDELSAIINSSSSSSSMVAENGDFHPFMNSSYGGLLPQSSTCSTYAPPLGDVF 167
           Q+IW SNGDELSAIIN SSSSSSMV ENG FHPFMN+SYGGLLPQSSTCS  AP  G+ F
Sbjct: 266 QEIWESNGDELSAIIN-SSSSSSMVGENGGFHPFMNTSYGGLLPQSSTCSPSAPSFGEAF 324

BLAST of Cp4.1LG03g11260 vs. NCBI nr
Match: gi|590660896|ref|XP_007035521.1| (AP2/ERF domain-containing transcription factor, putative [Theobroma cacao])

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 63/176 (35.80%), Postives = 89/176 (50.57%), Query Frame = 1

Query: 11  KNNNIPFTQSLPSNPCFENLDTNFLFSNDSNSGYLSCIVPDNCLKPPSDSTTSNDLQKLS 70
           ++NN P   S    P     D +F  S D+NSGYL+C+VPDNCLKPPS + TS  +    
Sbjct: 158 QSNNDP--SSADETPYGSVDDNSFFLSGDTNSGYLACVVPDNCLKPPS-TPTSPRVSNFC 217

Query: 71  FFASNSIDSQG-LDGSAM----------------AYNSSNDGVWDEQQIWMSNGDELSAI 130
             + N  ++Q   D  A+                 ++  N G W +QQ W  N +ELSA+
Sbjct: 218 SMSQNFRENQSHFDNYALPPDITSLPKSDNMEFPGFDELNQGFWSDQQSWEMNSNELSAM 277

Query: 131 INSSSSSSSMVAENGDF---HPFMNSSYGGLLPQ---SSTCSTYAPPLGDVFDFGY 164
           IN       ++ E+G     +P+ +S+   ++PQ   S TCS   PP GDV DFGY
Sbjct: 278 IN-----PPLLVEDGCMGASYPYNDSASYNMIPQATSSVTCSPSMPPFGDVVDFGY 325

BLAST of Cp4.1LG03g11260 vs. NCBI nr
Match: gi|593782405|ref|XP_007154243.1| (hypothetical protein PHAVU_003G102500g [Phaseolus vulgaris])

HSP 1 Score: 86.7 bits (213), Expect = 4.3e-14
Identity = 66/174 (37.93%), Postives = 87/174 (50.00%), Query Frame = 1

Query: 31  DTNFLFSNDSNSGYLSCIVPDNCLKPPSDSTTSNDLQKLSF----FASNSIDS------- 90
           D ++ FS+DSNSGYL CIVPDNC +P S ST S++ +K +       +NSI+S       
Sbjct: 182 DDSYFFSSDSNSGYLECIVPDNCFRPASSSTNSSNSRKSNVSDQKANANSIESTNHHHYS 241

Query: 91  ---------QGLDGSAMAYNSS--------NDGVWDEQQIWMSNGDELSAIINSSSSSSS 150
                    +G++ + MA N S        + G WD+QQ W  N  ELSAI       + 
Sbjct: 242 HVDMTSFSQEGMEMAPMASNFSDFWYPSELSQGSWDDQQSWDWNSSELSAIF-----KNP 301

Query: 151 MVAENG---------DFHPFMNSSYGGL--LPQSSTCSTYAPPLGDVFDFGYPL 166
           +  ENG         D  P  + SYG +     S+TCS   PP GDV D GYPL
Sbjct: 302 LRVENGCMDALYPITDHSPSPSPSYGLMNEAASSTTCSPSLPPFGDV-DLGYPL 349

BLAST of Cp4.1LG03g11260 vs. NCBI nr
Match: gi|596241598|ref|XP_007224487.1| (hypothetical protein PRUPE_ppa023203mg [Prunus persica])

HSP 1 Score: 80.5 bits (197), Expect = 3.1e-12
Identity = 71/204 (34.80%), Postives = 97/204 (47.55%), Query Frame = 1

Query: 3   TPNPNKNNKNNNIPFTQSLPSNPCFENLDTNFLFSN--DSNSGYLSCIVPDNCLKPPSDS 62
           T NPN  + N N    ++   +   +  D +F FSN  +SNSGYL+CIVPDNCL+PPS+S
Sbjct: 159 TQNPNIRSNNINTCGAETSRGSSAHDGDDDDFFFSNGSNSNSGYLACIVPDNCLRPPSES 218

Query: 63  ------------TTSNDLQKLSFFASNSI-------DSQGLDGSAMAYNSS--------- 122
                       +  N  Q  SF  +NSI       D   +  + MA N+S         
Sbjct: 219 DHHATNHRSSKTSDFNIDQDCSFANTNSIETKSHCLDVMNVQAALMASNTSPSGDQLPSF 278

Query: 123 ---NDGVWDEQQ-IWMSNGDELSAIINSSSSSSSMVAENGDFHPFMNSSYGGLLPQSST- 166
              + G WD QQ IW  +  ELSA +  +          G  +P + +S  GL+PQ++T 
Sbjct: 279 DGFSHGFWDNQQPIWELHSRELSAAMVDNPFMIEDGCMGGALYPIVENSSFGLIPQATTS 338

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LAJ6_CUCSA9.2e-4862.70Uncharacterized protein OS=Cucumis sativus GN=Csa_3G152130 PE=4 SV=1[more]
A0A061EQ20_THECC1.3e-1435.80AP2/ERF domain-containing transcription factor, putative OS=Theobroma cacao GN=T... [more]
V7C7U9_PHAVU3.0e-1437.93Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G102500g PE=4 SV=1[more]
M5XJG8_PRUPE2.1e-1234.80Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023203mg PE=4 SV=1[more]
A0A0S3R922_PHAAN1.4e-1135.58Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G525300 PE=... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|449433379|ref|XP_004134475.1|1.3e-4762.70PREDICTED: ethylene-responsive transcription factor ERF086 [Cucumis sativus][more]
gi|659076710|ref|XP_008438827.1|2.9e-4762.57PREDICTED: ethylene-responsive transcription factor ERF086 [Cucumis melo][more]
gi|590660896|ref|XP_007035521.1|1.9e-1435.80AP2/ERF domain-containing transcription factor, putative [Theobroma cacao][more]
gi|593782405|ref|XP_007154243.1|4.3e-1437.93hypothetical protein PHAVU_003G102500g [Phaseolus vulgaris][more]
gi|596241598|ref|XP_007224487.1|3.1e-1234.80hypothetical protein PRUPE_ppa023203mg [Prunus persica][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048731 system development
biological_process GO:0009791 post-embryonic development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0048367 shoot system development
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g11260.1Cp4.1LG03g11260.1mRNA


The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g11260Cp4.1LG08g04790Cucurbita pepo (Zucchini)cpecpeB482