Cla021243 (gene) Watermelon (97103) v1

Overview
NameCla021243
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionMYB transcription factor (AHRD V1 *-** Q6R098_ARATH); contains Interpro domain(s) IPR015495 Myb transcription factor
LocationChr5 : 1532336 .. 1534468 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCGGAAGAAGATGAGCTCCTTATTAACTATATTAAGGAAAACAATGGCCATGGTAGTTGGAGATCGCTCCCCAAGCTTGCAGGTTTAGTGATCCAAATTTTTTGCCAGTTTCCCACTTGTCATCTCTCATTCTGCAGTCTCTTTTTATTATTTTAAATTCTGGAACATATTCCTTCCTTCATAACTTCGAAATTTATTGTAACTGGAGTGACTATGGAAGAAGGAAAAAGAAGGAAGAAGAAGCTTGAGTAGTTAGTCCTTTACCTTGCTATTTTCCTTTTCACTTTCCCAATATCCCACCGTTCTCCTTTCTCCTATCTTATAGATTTAACGACAGCTATATCTTGTGTTTTGTTACCAAACAGTGTGCAGAAGAAGGTTTTAGCATGAGTTTGAATCTTTTGTTCTGGTAATTTCTTTTCTGCATAAGCGTTCTGTGTTGCCCGGCAAATGATGCTTAACATAAGATAATTTCCCCCCCTGCAAACTCTTCTCCTGTCGAGGAATACGTGCCTGCCTCGACCATCCTTCAAAATAAGAATAGTTGGTCTTTTGATTTATCTATAGTTTCCTATTTCACCCATGAGATTCCGAATTTTGGTCACCTGGATTATACATTTTTATATTCAAACTTACTCTGTTCAATATCCTAGTTCTTACACATGGGAAGCACCAAAAAGTTTCATGAACAATTGGGAGGGAACGACTTTGTCTTGTGTTCTACGTTTTTTGATTTGTCTCTCACATTGGATGGTATGGTCTGTCTGCGTGATTTGTTTATTCTAGGTCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGATGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGATGCTTCATTGTTTCTTCCTGAATGTTGTCGTAGGTTTGACTGCTTAAATTTGTGAAATCTTTTGTTTAATCGCCTCTGAACTACTAATTTGTTCGGATTTTGTTTATGGTCCCTTTTGTTTAGTCATCTAATATTTTGCTATATGTTTATGTCGTACTACACAAATGAGTAACAATTAGATATTTGAATGGAGCTGACTATGTTAGTGGTCTTTCTTTCTGACTTTCGGCTCGAGAGAAAGATATTTAGCTCGTGTTTGGTCATTGGAACCACTTTCAAGAAAACCCAAGTCCAAGTCTTGATTCTAAATAGTAGTTTGTAGAACTTGGAGGCCAGTCATACGATTGCTTTATCTGAGGTTTGGAGACTTTTTGAAAATCACAAAGAAATCAACATTCTGGGGCTTATCTACTTCTTCAACATGTTTTAGGATGGAATCAGAAAATTGTTTCTGTTCAACTATTTGCTGCTTTATGGATGTTGTTTGATGGAGTTTTAGAATCCTTGCAGGTGGGCTGCCATTGCTTCTCAACTGCCAGGAAGAACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTATGCATTGGCATTGATCCACAAACACACGAACCTTTCAACTCTCGCTGCTCATCCTCTACAGCACCAGCGTCTCCAACCACCCGCCACATGGCACAGTGGGAGAGTGCTCGACTAGAAGCCGAAGCACGACTTTCAAGGGAGTCATCACTCTTCACCCCACTTCTCATGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCCGAAGTTGGCGAATCATTTCGTAGGTGCAGGGAAGACAAAACCACATGCCAAAGCCAAAGCCCCCTATCCTCATCGATTAAATGCGAGTCGCTTTTCATTGTTGCGACTCACAACAGAGTTGATTACACCGGTTCCTCTGCCATGGAAAGCAATGAAAATGAAGAAACAGACTACAAAAACTTCCAATCCATGGCTGACATTGTGACATCCAAATCTGCTTCATCCAGTGCGAACGAGTTTGAGGAGTCATCGGATAGTGCATTGGGACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAGGAAAACAACATAAACACGCACCAGCATCTGCATTAG

mRNA sequence

ATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCGGAAGAAGATGAGCTCCTTATTAACTATATTAAGGAAAACAATGGCCATGGTAGTTGGAGATCGCTCCCCAAGCTTGCAGGTCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGATGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGGGCTGCCATTGCTTCTCAACTGCCAGGAAGAACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTATGCATTGGCATTGATCCACAAACACACGAACCTTTCAACTCTCGCTGCTCATCCTCTACAGCACCAGCGTCTCCAACCACCCGCCACATGGCACAGTGGGAGAGTGCTCGACTAGAAGCCGAAGCACGACTTTCAAGGGAGTCATCACTCTTCACCCCACTTCTCATGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCCGAAGTTGGCGAATCATTTCGTAGGTGCAGGGAAGACAAAACCACATGCCAAAGCCAAAGCCCCCTATCCTCATCGATTAAATGCGAGTCGCTTTTCATTGTTGCGACTCACAACAGAGTTGATTACACCGGTTCCTCTGCCATGGAAAGCAATGAAAATGAAGAAACAGACTACAAAAACTTCCAATCCATGGCTGACATTGTGACATCCAAATCTGCTTCATCCAGTGCGAACGAGTTTGAGGAGTCATCGGATAGTGCATTGGGACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAGGAAAACAACATAAACACGCACCAGCATCTGCATTAG

Coding sequence (CDS)

ATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCGGAAGAAGATGAGCTCCTTATTAACTATATTAAGGAAAACAATGGCCATGGTAGTTGGAGATCGCTCCCCAAGCTTGCAGGTCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGATGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGGGCTGCCATTGCTTCTCAACTGCCAGGAAGAACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTATGCATTGGCATTGATCCACAAACACACGAACCTTTCAACTCTCGCTGCTCATCCTCTACAGCACCAGCGTCTCCAACCACCCGCCACATGGCACAGTGGGAGAGTGCTCGACTAGAAGCCGAAGCACGACTTTCAAGGGAGTCATCACTCTTCACCCCACTTCTCATGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCCGAAGTTGGCGAATCATTTCGTAGGTGCAGGGAAGACAAAACCACATGCCAAAGCCAAAGCCCCCTATCCTCATCGATTAAATGCGAGTCGCTTTTCATTGTTGCGACTCACAACAGAGTTGATTACACCGGTTCCTCTGCCATGGAAAGCAATGAAAATGAAGAAACAGACTACAAAAACTTCCAATCCATGGCTGACATTGTGACATCCAAATCTGCTTCATCCAGTGCGAACGAGTTTGAGGAGTCATCGGATAGTGCATTGGGACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAGGAAAACAACATAAACACGCACCAGCATCTGCATTAG

Protein sequence

MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCIGIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDSDFFLQIWNSEVGESFRRCREDKTTCQSQSPLSSSIKCESLFIVATHNRVDYTGSSAMESNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEENNINTHQHLH
Homology
[Close]
BLAST of Cla021243 vs. Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-52
Identity = 94/147 (63.95%), Postives = 115/147 (78.23%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGR+PCC+K    KG WT EED+ LINYI+ + G G WRSLPK AGLLRCGKSCRLRW N
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLINYIRAH-GEGCWRSLPKAAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPD+KRG FT EE++++I+LH +LGN+W+ IA  LPGRTDNEIKN WNTH+K++L+  
Sbjct: 61  YLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKLVSR 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRH 148
           GIDPQTH   NS  +++TA A+PT  +
Sbjct: 121 GIDPQTHRSLNS--ATTTATATPTVNN 144

[Close]
BLAST of Cla021243 vs. Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.3e-52
Identity = 95/147 (64.63%), Postives = 113/147 (76.87%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGR PCCDK G+KKGPWT+EED+ LI++I   NG   WR++PKLAGL RCGKSCRLRWTN
Sbjct: 1   MGRQPCCDKLGVKKGPWTAEEDKKLISFIL-TNGQCCWRAVPKLAGLKRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPD+KRG  +  EEKLVI LH  LGNRW+ IA++LPGRTDNEIKN WNTH+KK+LL +
Sbjct: 61  YLRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKM 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRH 148
           GIDP THEP     + S  P + + ++
Sbjct: 121 GIDPVTHEPLKKEANLSDQPTTESDQN 146

[Close]
BLAST of Cla021243 vs. Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.6e-51
Identity = 91/166 (54.82%), Postives = 117/166 (70.48%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGR+PCC+K    KG WT EED+ L++YI+ N+G G WRSLPK AGLLRCGKSCRLRW N
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDQRLVDYIR-NHGEGCWRSLPKSAGLLRCGKSCRLRWIN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPD+KRG FT +E++++I+LH +LGN+W+ IA +LPGRTDNEIKN WNTH+K++LL  
Sbjct: 61  YLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSH 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRES 167
           GIDPQTH   N   + S+    P      ++  + L  + +    S
Sbjct: 121 GIDPQTHRQINESKTVSSQVVVPIQNDAVEYSFSNLAVKPKTENSS 165

[Close]
BLAST of Cla021243 vs. Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-50
Identity = 90/129 (69.77%), Postives = 104/129 (80.62%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGR PCC+K GL++GPWTSEED+ L+++I  NNG   WR++PKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHIT-NNGLSCWRAIPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPD+KRG F+  EE L++ LH  LGNRW+ IA+QLPGRTDNEIKN WNT LKKRL   
Sbjct: 61  YLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQ 120

Query: 121 GIDPQTHEP 130
           G+DP TH P
Sbjct: 121 GLDPNTHLP 128

[Close]
BLAST of Cla021243 vs. Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.3e-50
Identity = 90/130 (69.23%), Postives = 106/130 (81.54%), Query Frame = 1 

Query: 1   MGRTPCCDK-KGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWT 60
           MGR+PCCD+ KG+KKGPW  EED+ L  YI EN G+G+WRSLPKLAGL RCGKSCRLRW 
Sbjct: 1   MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINEN-GYGNWRSLPKLAGLNRCGKSCRLRWM 60

Query: 61  NYLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLC 120
           NYLRPDI+RG F+  EE  +++LH +LGN+W+ IA  LPGRTDNEIKN WNTH++K+LL 
Sbjct: 61  NYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQ 120

Query: 121 IGIDPQTHEP 130
           +GIDP THEP
Sbjct: 121 MGIDPVTHEP 129

[Close]
BLAST of Cla021243 vs. TrEMBL
Match: A0A067H2J7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021486mg PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 2.9e-116
Identity = 215/297 (72.39%), Postives = 247/297 (83.16%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGRTPCCDKKGLKKGPW  EEDE+L+ YIK  NGHGSWRSLPKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRTPCCDKKGLKKGPWAPEEDEILVEYIK-RNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPDIKRGPFT EEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKR+L +
Sbjct: 61  YLRPDIKRGPFTEEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRMLLM 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180
           G+DPQTHEPF+S   +  APA+PTTRHMAQWESARLEAEARLSRES LF    M + TDS
Sbjct: 121 GLDPQTHEPFSSSGPAIKAPATPTTRHMAQWESARLEAEARLSRESLLFNTPSMGK-TDS 180

Query: 181 DFFLQIWNSEVGESFRRCRED-KTTCQS-QSPLSSSIKCESLFIVATHNRVDYTGSSAME 240
           D FL++WNSEVGESFR+  +  KT CQS  S +SSS KC S+  V+T    +  GSSA  
Sbjct: 181 DHFLRMWNSEVGESFRKFNKGVKTACQSPNSQVSSSTKCGSVSAVSTEIGHNLAGSSATP 240

Query: 241 SNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEEN 296
           SN+NE+T+ K+ +S  + + + S +SS+N+ ++SSDS+L LLLDFPINNDMSFLE+N
Sbjct: 241 SNQNEDTECKSSKSCTEDMVAGSDTSSSNDLQDSSDSSLQLLLDFPINNDMSFLEDN 295

[Close]
BLAST of Cla021243 vs. TrEMBL
Match: V4TDD2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021268mg PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 2.9e-116
Identity = 215/297 (72.39%), Postives = 247/297 (83.16%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGRTPCCDKKGLKKGPW  EEDE+L+ YIK  NGHGSWRSLPKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRTPCCDKKGLKKGPWAPEEDEILVEYIK-RNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPDIKRGPFT EEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKR+L +
Sbjct: 61  YLRPDIKRGPFTEEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRMLLM 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180
           G+DPQTHEPF+S   +  APA+PTTRHMAQWESARLEAEARLSRES LF    M + TDS
Sbjct: 121 GLDPQTHEPFSSSGPAIKAPATPTTRHMAQWESARLEAEARLSRESLLFNTPSMGK-TDS 180

Query: 181 DFFLQIWNSEVGESFRRCRED-KTTCQS-QSPLSSSIKCESLFIVATHNRVDYTGSSAME 240
           D FL++WNSEVGESFR+  +  KT CQS  S +SSS KC S+  V+T    +  GSSA  
Sbjct: 181 DHFLRMWNSEVGESFRKFNKGVKTACQSPNSQVSSSTKCGSVSAVSTEIGHNLAGSSATP 240

Query: 241 SNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEEN 296
           SN+NE+T+ K+ +S  + + + S +SS+N+ ++SSDS+L LLLDFPINNDMSFLE+N
Sbjct: 241 SNQNEDTECKSSKSCTEDMVAGSDTSSSNDLQDSSDSSLQLLLDFPINNDMSFLEDN 295

[Close]
BLAST of Cla021243 vs. TrEMBL
Match: A0A061E159_THECC (Myb domain protein 17 isoform 1 OS=Theobroma cacao GN=TCM_005371 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.2e-114
Identity = 216/306 (70.59%), Postives = 246/306 (80.39%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGRTPCCD+KGLKKGPW  EEDE+L+NYIK++ GHGSWRSLPKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRTPCCDRKGLKKGPWAPEEDEILVNYIKKH-GHGSWRSLPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPDIKRGPFT EEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRL+C+
Sbjct: 61  YLRPDIKRGPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLVCM 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180
           G+DPQTHEPF     ++ AP SP TRHMAQWESARLEAEARLSRES LF+   + +  DS
Sbjct: 121 GLDPQTHEPFTPCGPTTAAPTSPATRHMAQWESARLEAEARLSRESLLFSSPPLGK-PDS 180

Query: 181 DFFLQIWNSEVGESFRRC-REDKTTCQSQ-SPLSSSIKCESLFIVATHNRVDYTGSSAME 240
           D+FL++WNSEVGESFR+  REDKT CQS  S  SSS KC S+  V      +  GSS   
Sbjct: 181 DYFLRLWNSEVGESFRKLNREDKTACQSPISQASSSTKCGSVSAVTIDICPNIAGSSTPA 240

Query: 241 SNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEENNIN 300
           SN+ E+T  K+F+S  +     S SS +NE E+SSD+AL LLLDFPINNDMSFLE  N++
Sbjct: 241 SNQIEDTACKSFKSCTEDPVDASDSSCSNESEDSSDTALQLLLDFPINNDMSFLE--NVD 300

Query: 301 THQHLH 305
           T+   H
Sbjct: 301 TYATSH 302

[Close]
BLAST of Cla021243 vs. TrEMBL
Match: B9RDP3_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_1614750 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 6.1e-114
Identity = 218/301 (72.43%), Postives = 246/301 (81.73%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGRTPCCDKKGLKKGPWT EEDE+L++YIK+ NGHGSWRSLPKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRTPCCDKKGLKKGPWTPEEDEVLVSYIKK-NGHGSWRSLPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPDIKRGPFT EEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLC+
Sbjct: 61  YLRPDIKRGPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCM 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180
           G+DPQTHEPF S     TAPASP TRHMAQWESARLEAEARLSRESSLF P   ++ TD 
Sbjct: 121 GLDPQTHEPFTSCGPYITAPASPATRHMAQWESARLEAEARLSRESSLFNPPTPKK-TDC 180

Query: 181 DFFLQIWNSEVGESFRRC-REDKTTCQ---SQSPLSSSIKCESLFIVATHN-RVDYTGSS 240
           D+FL+IWNSEVGESFR+  R DK +CQ   S S  SSS K  S+  + T +   +  GSS
Sbjct: 181 DYFLRIWNSEVGESFRKFHRGDKASCQSPASASQASSSTKYGSVSALTTVDISPNIAGSS 240

Query: 241 AMESNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEEN 297
              S++ E+T+ K+ +S  + + + S SSS+ E E+SSDS L LLLDFPINNDMSFLE N
Sbjct: 241 TPPSDQIEDTECKSCKSYVEDMNAGSDSSSSIELEDSSDSTLQLLLDFPINNDMSFLEGN 299

[Close]
BLAST of Cla021243 vs. TrEMBL
Match: B9I8G7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07700g PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.9e-113
Identity = 214/298 (71.81%), Postives = 238/298 (79.87%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGRTPCCDK GLKKG WT EEDELL++YIK+ NGHGSWRSLPKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRTPCCDKNGLKKGAWTPEEDELLVSYIKK-NGHGSWRSLPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPDIKR PFT EEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLC+
Sbjct: 61  YLRPDIKRHPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCL 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180
           G+DPQTHEPF SR  ++  PASP TRHM QWESARLEAEARLSRESSLF P +  +  D 
Sbjct: 121 GLDPQTHEPFTSRGPANKGPASPATRHMTQWESARLEAEARLSRESSLFLPPIPGK-IDC 180

Query: 181 DFFLQIWNSEVGESFRRCRED--KTTCQSQ-SPLSSSIKCESLFIVATHNRVDYTGSSAM 240
           D+FL+IWNSEVGESFRR      KT C S  S  SSS KC S+  +      +  GSSA 
Sbjct: 181 DYFLRIWNSEVGESFRRINMGGAKTACPSPVSQASSSTKCGSISAITADISPNLAGSSAA 240

Query: 241 ESNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEEN 296
            SN+NE+ + K+ +S A+ V +   SSS+ E E+S+DS L LLLDFPINNDMSFLE N
Sbjct: 241 ASNQNEDMECKSCRSDAEDVMAGPDSSSSAESEDSTDSTLQLLLDFPINNDMSFLEGN 296

[Close]
BLAST of Cla021243 vs. NCBI nr
Match: gi|449432165|ref|XP_004133870.1| (PREDICTED: transcription repressor MYB6 [Cucumis sativus])

HSP 1 Score: 599.7 bits (1545), Expect = 2.8e-168
Identity = 292/305 (95.74%), Postives = 297/305 (97.38%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGRTPCCDKKGLKKGPWTSEEDELLINYI+ENNGHGSWRSLPKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIRENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI
Sbjct: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180
           GIDPQTHEPFNSRCSSSTAPASP TRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS
Sbjct: 121 GIDPQTHEPFNSRCSSSTAPASPATRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180

Query: 181 DFFLQIWNSEVGESFRRCREDKTTCQSQSPLSSSIKCESLFIVATHNRVDYTGSSAMES- 240
           DFFLQIWNSEVGESFRRCR+DKTTCQS SPLSSS+KCESLFIVATHNRVDYTGSSAMES 
Sbjct: 181 DFFLQIWNSEVGESFRRCRDDKTTCQSLSPLSSSVKCESLFIVATHNRVDYTGSSAMESN 240

Query: 241 NENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEENNINT 300
           NENEET+YKNFQSM DIV SKS SSSANEFEESSDSALGLLLDFPINNDMSFLEE+NI T
Sbjct: 241 NENEETEYKNFQSMTDIVMSKSDSSSANEFEESSDSALGLLLDFPINNDMSFLEEDNIIT 300

Query: 301 HQHLH 305
            QHLH
Sbjct: 301 QQHLH 305

[Close]
BLAST of Cla021243 vs. NCBI nr
Match: gi|659077729|ref|XP_008439352.1| (PREDICTED: transcription factor MYB34-like [Cucumis melo])

HSP 1 Score: 504.2 bits (1297), Expect = 1.6e-139
Identity = 248/260 (95.38%), Postives = 253/260 (97.31%), Query Frame = 1 

Query: 46  GLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEI 105
           GLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEI
Sbjct: 89  GLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEI 148

Query: 106 KNLWNTHLKKRLLCIGIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRE 165
           KNLWNTHLKKRLLCIGIDPQTHEPFNSRCSSSTAPASP TRHMAQWESARLEAEARLSRE
Sbjct: 149 KNLWNTHLKKRLLCIGIDPQTHEPFNSRCSSSTAPASPATRHMAQWESARLEAEARLSRE 208

Query: 166 SSLFTPLLMERTTDSDFFLQIWNSEVGESFRRCREDKTTCQSQSPLSSSIKCESLFIVAT 225
           SSLFTPLLM+RTTDSDFFLQIWNSEVGESFRRCREDKTTCQSQSPLSSS+KCESLFIVAT
Sbjct: 209 SSLFTPLLMDRTTDSDFFLQIWNSEVGESFRRCREDKTTCQSQSPLSSSVKCESLFIVAT 268

Query: 226 HNRVDYTGSSAMES-NENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFP 285
           H+RVDYTGSSAMES NENEET+YKNFQSM DIV SKS SSSANEFEESSDSALGLLLDFP
Sbjct: 269 HDRVDYTGSSAMESNNENEETEYKNFQSMTDIVMSKSDSSSANEFEESSDSALGLLLDFP 328

Query: 286 INNDMSFLEENNINTHQHLH 305
           INNDMSFLEE+N NT QHLH
Sbjct: 329 INNDMSFLEEDNRNTQQHLH 348

[Close]
BLAST of Cla021243 vs. NCBI nr
Match: gi|567905200|ref|XP_006445088.1| (hypothetical protein CICLE_v10021268mg [Citrus clementina])

HSP 1 Score: 426.4 bits (1095), Expect = 4.2e-116
Identity = 215/297 (72.39%), Postives = 247/297 (83.16%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGRTPCCDKKGLKKGPW  EEDE+L+ YIK  NGHGSWRSLPKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRTPCCDKKGLKKGPWAPEEDEILVEYIK-RNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPDIKRGPFT EEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKR+L +
Sbjct: 61  YLRPDIKRGPFTEEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRMLLM 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180
           G+DPQTHEPF+S   +  APA+PTTRHMAQWESARLEAEARLSRES LF    M + TDS
Sbjct: 121 GLDPQTHEPFSSSGPAIKAPATPTTRHMAQWESARLEAEARLSRESLLFNTPSMGK-TDS 180

Query: 181 DFFLQIWNSEVGESFRRCRED-KTTCQS-QSPLSSSIKCESLFIVATHNRVDYTGSSAME 240
           D FL++WNSEVGESFR+  +  KT CQS  S +SSS KC S+  V+T    +  GSSA  
Sbjct: 181 DHFLRMWNSEVGESFRKFNKGVKTACQSPNSQVSSSTKCGSVSAVSTEIGHNLAGSSATP 240

Query: 241 SNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEEN 296
           SN+NE+T+ K+ +S  + + + S +SS+N+ ++SSDS+L LLLDFPINNDMSFLE+N
Sbjct: 241 SNQNEDTECKSSKSCTEDMVAGSDTSSSNDLQDSSDSSLQLLLDFPINNDMSFLEDN 295

[Close]
BLAST of Cla021243 vs. NCBI nr
Match: gi|590722298|ref|XP_007051856.1| (Myb domain protein 17 isoform 1 [Theobroma cacao])

HSP 1 Score: 421.0 bits (1081), Expect = 1.8e-114
Identity = 216/306 (70.59%), Postives = 246/306 (80.39%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGRTPCCD+KGLKKGPW  EEDE+L+NYIK++ GHGSWRSLPKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRTPCCDRKGLKKGPWAPEEDEILVNYIKKH-GHGSWRSLPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPDIKRGPFT EEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRL+C+
Sbjct: 61  YLRPDIKRGPFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLVCM 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180
           G+DPQTHEPF     ++ AP SP TRHMAQWESARLEAEARLSRES LF+   + +  DS
Sbjct: 121 GLDPQTHEPFTPCGPTTAAPTSPATRHMAQWESARLEAEARLSRESLLFSSPPLGK-PDS 180

Query: 181 DFFLQIWNSEVGESFRRC-REDKTTCQSQ-SPLSSSIKCESLFIVATHNRVDYTGSSAME 240
           D+FL++WNSEVGESFR+  REDKT CQS  S  SSS KC S+  V      +  GSS   
Sbjct: 181 DYFLRLWNSEVGESFRKLNREDKTACQSPISQASSSTKCGSVSAVTIDICPNIAGSSTPA 240

Query: 241 SNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEENNIN 300
           SN+ E+T  K+F+S  +     S SS +NE E+SSD+AL LLLDFPINNDMSFLE  N++
Sbjct: 241 SNQIEDTACKSFKSCTEDPVDASDSSCSNESEDSSDTALQLLLDFPINNDMSFLE--NVD 300

Query: 301 THQHLH 305
           T+   H
Sbjct: 301 TYATSH 302

[Close]
BLAST of Cla021243 vs. NCBI nr
Match: gi|743828831|ref|XP_011023364.1| (PREDICTED: transcription repressor MYB6-like isoform X1 [Populus euphratica])

HSP 1 Score: 419.9 bits (1078), Expect = 3.9e-114
Identity = 217/298 (72.82%), Postives = 243/298 (81.54%), Query Frame = 1 

Query: 1   MGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLLRCGKSCRLRWTN 60
           MGRTPCCDKKGLKKGPWT EEDELL+ YIK+ NGHGSWRSLPKLAGLLRCGKSCRLRWTN
Sbjct: 1   MGRTPCCDKKGLKKGPWTPEEDELLVTYIKK-NGHGSWRSLPKLAGLLRCGKSCRLRWTN 60

Query: 61  YLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCI 120
           YLRPDIKRG FT EEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLC+
Sbjct: 61  YLRPDIKRGAFTLEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCL 120

Query: 121 GIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDS 180
           GIDPQTHEPF+SR      PASP TRHMAQWESARLEAE RLSRESSLF P ++E+  D 
Sbjct: 121 GIDPQTHEPFSSRGPVIKGPASPATRHMAQWESARLEAEKRLSRESSLFLPPMVEK-IDC 180

Query: 181 DFFLQIWNSEVGESFRRCR--EDKTTCQSQ-SPLSSSIKCESLFIVATHNRVDYTGSSAM 240
           D FL+IWNSEVGESFRR    ++KT CQS  S  SSS KC S+  +      + + S A 
Sbjct: 181 DHFLRIWNSEVGESFRRINMGDNKTACQSPVSQASSSTKCGSISAITADIIPNLSRSPAT 240

Query: 241 ESNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEEN 296
            SN+NE+ ++K+ +S A+ V + S SSSA E E+ +DS L LLLDFPINNDMSFL++N
Sbjct: 241 ASNQNEDMEWKSPKSYAEDVLAGSDSSSA-ELEDLTDSTLQLLLDFPINNDMSFLDKN 295

The following BLAST results are available for this feature:
BLAST of Cla021243 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB30_ANTMA1.5e-5263.95Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1[more]
ODO1_PETHY4.3e-5264.63Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1[more]
MYB6_ARATH1.6e-5154.82Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1[more]
MYB2_PHYPA1.8e-5069.77Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1[more]
MYB39_ARATH2.3e-5069.23Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1[more]
BLAST of Cla021243 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067H2J7_CITSI2.9e-11672.39Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021486mg PE=4 SV=1[more]
V4TDD2_9ROSI2.9e-11672.39Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021268mg PE=4 SV=1[more]
A0A061E159_THECC1.2e-11470.59Myb domain protein 17 isoform 1 OS=Theobroma cacao GN=TCM_005371 PE=4 SV=1[more]
B9RDP3_RICCO6.1e-11472.43R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_1614750 PE=4... [more]
B9I8G7_POPTR3.9e-11371.81Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s07700g PE=4 SV=1[more]
BLAST of Cla021243 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432165|ref|XP_004133870.1|2.8e-16895.74PREDICTED: transcription repressor MYB6 [Cucumis sativus][more]
gi|659077729|ref|XP_008439352.1|1.6e-13995.38PREDICTED: transcription factor MYB34-like [Cucumis melo][more]
gi|567905200|ref|XP_006445088.1|4.2e-11672.39hypothetical protein CICLE_v10021268mg [Citrus clementina][more]
gi|590722298|ref|XP_007051856.1|1.8e-11470.59Myb domain protein 17 isoform 1 [Theobroma cacao][more]
gi|743828831|ref|XP_011023364.1|3.9e-11472.82PREDICTED: transcription repressor MYB6-like isoform X1 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009909 regulation of flower development
biological_process GO:0008150 biological_process
biological_process GO:0030154 cell differentiation
biological_process GO:0050789 regulation of biological process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009908 flower development
biological_process GO:0048443 stamen development
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0044212 transcription regulatory region DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU48548watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021243Cla021243.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU48548WMU48548transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..62
score: 1.7E-13coord: 68..113
score: 4.7
IPR001005SANT/Myb domainSMARTSM00717santcoord: 67..115
score: 4.6E-15coord: 13..64
score: 1.1
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 66..117
score: 2.9E-26coord: 5..65
score: 7.4
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 11..109
score: 2.2
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 9..62
score: 14.653coord: 63..117
score: 25
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..192
score: 3.2E-149coord: 223..295
score: 3.2E
NoneNo IPR availablePANTHERPTHR10641:SF622SUBFAMILY NOT NAMEDcoord: 1..192
score: 3.2E-149coord: 223..295
score: 3.2E