ClCG05G001640 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCAAATTCGAACCAGCAATCGCAAGAGCTACTCGTGCTTGTGGCTTTCAATGGCTTAGGGCACCATCGTGTCGTATCGTCTTCTTCATCATTGTCCTGTTTTTGTGGTTAGTCAAATTACTGCATTCTTACTCCGCAAATTCATACAAAAAGGAAAAGATTTCGTTTGTTTTCTTTCAATTTTTGGTTTCTTTTTTATTCACCAGTCCGATGCTCGCAGAGTTTGAAACTGATGCCCTCGAATCTCAGCTTTCTCGCTCTTTACCCTTCTCCGCTTTTGTTCAATTTCATTTTTCAACTCCTTTACCTAATTTCTAAAAGGAGTAATGGTATTATGACATTTTGTTTTGTCTTTCTCTCTCTTTCCGAGGCATTTATTATCACAACTTTCGATTGTTCAGTGGGATAAAGGTAACTCTGTTTTGTTTCAGTATTTATCTATTTTGGTTTAGACTCATTTTGACCTCGATTATTGTTGAAATCGTGTGAATTATTGTATTCTGTTTGTTAAGATTTAATCTTATCTTAAATAGCATATGCACTAACGAAATCTGTCCAATTTTAGATAAGAAAAAGGTATGGTTAATGTATTTGTTTATTTTAGGCACACATACGCATGTTTTGTAATTAACATTATCTTAATCAAGGGAAGGTTTCTCACAATTTAGAGTTTCCTACTAAAATTAAGCAGGAAAGTTTTCTTATTATGAAGTTCTAGTTGAAAAAATGAAGTTTGTTTTGTTTATTGTTTAGGAATTAGATTGGAAGAGGGAAGAGGGAAGAGGGAGTTTTGAAAGACCCACAAGGGAACAGTGGTGAAGGCCTGGTCTTGTCATGGTATGTCCCGTACTCTGTATATCATTTTCATCATAATAAATGCGTCTCAAATCTCTCTCTGTTCAATAAATGCTCGTCTGCATTGTGAGAATCCGCAATAAATTCTTCTCCTTATTCGCTTATTTCTTATATCAGTTGTGCGTAATTGTAAAACCTCAGAATAAGAAACCTCTGCATTAACTCCCTCAATTTTTTTGGACAAATTTTACTTTCAATGATGATTCAATTCTTACTATGCTCAACCATGTCAGTATTTATTGCAAGAACCAGCTTGAAACTAGCTGATTCTTGTCCTTCCCCTCCAGACTCACATAGCCATTAATTTCCCTCTTTTCATTTCAATTCATTGAGATAACCCCTTGCACATGGCTTCCCTCCTCCTTTTGTAATTCGCTTTTGTAAAGTTGATGCTCTAAGGAAGGATCTGGATTTTGTTCTTTCACTCCTGGTCACTTGAAAGGGTGTCTCTGCCTCTGGTAGTGAAAGTTGTGAGATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCGGAAGAAGATGAGCTCCTTATTAACTATATTAAGGAAAACAATGGCCATGGTAGTTGGAGATCGCTCCCCAAGCTTGCAGGTTTAGTGATCCAAATTTTTTGCCAGTTTCCCACTTGTCATCTCTCATTCTGCAGTCTCTTTTTATTATTTTAAATTCTGGAACATATTCCTTCCTTCATAACTTCGAAATTTATTGTAACTGGAGTGACTATGGAAGAAGGAAAAAGAAGGAAGAAGAAGCTTGAGTAGTTAGTCCTTTACCTTGCTATTTTCCTTTTCACTTTCCCAATATCCCACCGTTCTCCTTTCTCCTATCTTATAGATTTAACGACAGCTATATCTTGTGTTTTGTTACCAAACAGTGTGCAGAAGAAGGTTTTAGCATGAGTTTGAATCTTTTGTTCTGGTAATTTCTTTTCTGCATAAGCGTTCTGTGTTGCCCGGCAAATGATGCTTAACATAAGATAATTTCCCCCCCTGCAAACTCTTCTCCTGTCGAGGAATACGTGCCTGCCTCGACCATCCTTCAAAATAAGAATAGTTGGTCTTTTGATTTATCTATAGTTTCCTATTTCACCCATGAGATTCCGAATTTTGGTCACCTGGATTATACATTTTTATATTCAAACTTACTCTGTTCAATATCCTAGTTCTTACACATGGGAAGCACCAAAAAGTTTCATGAACAATTGGGAGGGAACGACTTTGTCTTGTGTTCTACGTTTTTTGATTTGTCTCTCACATTGGATGGTATGGTCTGTCTGCGTGATTTGTTTATTCTAGGTCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGATGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGATGCTTCATTGTTTCTTCCTGAATGTTGTCGTAGGTTTGACTGCTTAAATTTGTGAAATCTTTTGTTTAATCGCCTCTGAACTACTAATTTGTTCGGATTTTGTTTATGGTCCCTTTTGTTTAGTCATCTAATATTTTGCTATATGTTTATGTCGTACTACACAAATGAGTAACAATTAGATATTTGAATGGAGCTGACTATGTTAGTGGTCTTTCTTTCTGACTTTCGGCTCGAGAGAAAGATATTTAGCTCGTGTTTGGTCATTGGAACCACTTTCAAGAAAACCCAAGTCCAAGTCTTGATTCTAAATAGTAGTTTGTAGAACTTGGAGGCCAGTCATACGATTGCTTTATCTGAGGTTTGGAGACTTTTTGAAAATCACAAAGAAATCAACATTCTGGGGCTTATCTACTTCTTCAACATGTTTTAGGATGGAATCAGAAAATTGTTTCTGTTCAACTATTTGCTGCTTTATGGATGTTGTTTGATGGAGTTTTAGAATCCTTGCAGGTGGGCTGCCATTGCTTCTCAACTGCCAGGAAGAACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTATGCATTGGCATTGATCCACAAACACACGAACCTTTCAACTCTCGCTGCTCATCCTCTACAGCACCAGCGTCTCCAACCACCCGCCACATGGCACAGTGGGAGAGTGCTCGACTAGAAGCCGAAGCACGACTTTCAAGGGAGTCATCACTCTTCACCCCACTTCTCATGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCCGAAGTTGGCGAATCATTTCGTAGGTGCAGGGAAGACAAAACCACATGCCAAAGCCAAAGCCCCCTATCCTCATCGATTAAATGCGAGTCGCTTTTCATTGTTGCGACTCACAACAGAGTTGATTACACCGGTTCCTCTGCCATGGAAAGCAATGAAAATGAAGAAACAGACTACAAAAACTTCCAATCCATGGCTGACATTGTGACATCCAAATCTGCTTCATCCAGTGCGAACGAGTTTGAGGAGTCATCGGATAGTGCATTGGGACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAGGAAAACAACATAAACACGCACCAGCATCTGCATTAGATTAAGAGCCTTATTTCGTTGCCCCTCCTTGATGGGACGATGATTTAAGTTTCTTTGGTAGTTTAGGTCCAAGTTTTGTGGTTTGTTAGCAAAACTATTGGTCAAGTAGCCATTTTTTTTGTGCTTTAAATTGGAAGCTGTGTTCAGAGAAAGATGTTGTATCTCCATTGCTACTTATAAAAGCAATTGAAAAGGGGATTTGGATTTGGATTTCTAGTGAGCAGCAAATGTTCAGTATGTAGATAGCACATATATATATGTGTGTGTATATGGTTTTGACTTCATG ATGGCGCCAAATTCGAACCAGCAATCGCAAGAGCTACTCGTGCTTGTGGCTTTCAATGGCTTAGGGCACCATCGTGTCGTATCGTCTTCTTCATCATTGTCCTGTTTTTGTGAGTTTGAAACTGATGCCCTCGAATCTCAGCTTTCTCGCTCTTTACCCTTCTCCGCTTTTGGTGTCTCTGCCTCTGGTAGTGAAAGTTGTGAGATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCGGAAGAAGATGAGCTCCTTATTAACTATATTAAGGAAAACAATGGCCATGGTAGTTGGAGATCGCTCCCCAAGCTTGCAGGTTTATTCTTACACATGGGAAGCACCAAAAAGTTTCATGAACAATTGGGAGGGAACGACTTTGTCTTGTGTTCTACGTTTTTTGATTTGTCTCTCACATTGGATGGTATGGTCTGTCTGCGTGATTTGTTTATTCTAGGTCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGATGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGGGCTGCCATTGCTTCTCAACTGCCAGGAAGAACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTATGCATTGGCATTGATCCACAAACACACGAACCTTTCAACTCTCGCTGCTCATCCTCTACAGCACCAGCGTCTCCAACCACCCGCCACATGGCACAGTGGGAGAGTGCTCGACTAGAAGCCGAAGCACGACTTTCAAGGGAGTCATCACTCTTCACCCCACTTCTCATGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCCGAAGTTGGCGAATCATTTCGTAGGTGCAGGGAAGACAAAACCACATGCCAAAGCCAAAGCCCCCTATCCTCATCGATTAAATGCGAGTCGCTTTTCATTGTTGCGACTCACAACAGAGTTGATTACACCGGTTCCTCTGCCATGGAAAGCAATGAAAATGAAGAAACAGACTACAAAAACTTCCAATCCATGGCTGACATTGTGACATCCAAATCTGCTTCATCCAGTGCGAACGAGTTTGAGGAGTCATCGGATAGTGCATTGGGACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAGGAAAACAACATAAACACGCACCAGCATCTGCATTAGATTAAGAGCCTTATTTCGTTGCCCCTCCTTGATGGGACGATGATTTAAGTTTCTTTGGTAGTTTAGGTCCAAGTTTTGTGGTTTGTTAGCAAAACTATTGGTCAAGTAGCCATTTTTTTTGTGCTTTAAATTGGAAGCTGTGTTCAGAGAAAGATGTTGTATCTCCATTGCTACTTATAAAAGCAATTGAAAAGGGGATTTGGATTTGGATTTCTAGTGAGCAGCAAATGTTCAGTATGTAGATAGCACATATATATATGTGTGTGTATATGGTTTTGACTTCATG ATGGCGCCAAATTCGAACCAGCAATCGCAAGAGCTACTCGTGCTTGTGGCTTTCAATGGCTTAGGGCACCATCGTGTCGTATCGTCTTCTTCATCATTGTCCTGTTTTTGTGAGTTTGAAACTGATGCCCTCGAATCTCAGCTTTCTCGCTCTTTACCCTTCTCCGCTTTTGGTGTCTCTGCCTCTGGTAGTGAAAGTTGTGAGATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCGGAAGAAGATGAGCTCCTTATTAACTATATTAAGGAAAACAATGGCCATGGTAGTTGGAGATCGCTCCCCAAGCTTGCAGGTTTATTCTTACACATGGGAAGCACCAAAAAGTTTCATGAACAATTGGGAGGGAACGACTTTGTCTTGTGTTCTACGTTTTTTGATTTGTCTCTCACATTGGATGGTATGGTCTGTCTGCGTGATTTGTTTATTCTAGGTCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGATGGACAAACTATCTAAGACCTGATATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGGGCTGCCATTGCTTCTCAACTGCCAGGAAGAACAGATAACGAAATCAAGAACTTATGGAACACCCACCTCAAGAAACGTCTTCTATGCATTGGCATTGATCCACAAACACACGAACCTTTCAACTCTCGCTGCTCATCCTCTACAGCACCAGCGTCTCCAACCACCCGCCACATGGCACAGTGGGAGAGTGCTCGACTAGAAGCCGAAGCACGACTTTCAAGGGAGTCATCACTCTTCACCCCACTTCTCATGGAAAGAACAACTGATTCTGACTTTTTTCTTCAAATATGGAACTCCGAAGTTGGCGAATCATTTCGTAGGTGCAGGGAAGACAAAACCACATGCCAAAGCCAAAGCCCCCTATCCTCATCGATTAAATGCGAGTCGCTTTTCATTGTTGCGACTCACAACAGAGTTGATTACACCGGTTCCTCTGCCATGGAAAGCAATGAAAATGAAGAAACAGACTACAAAAACTTCCAATCCATGGCTGACATTGTGACATCCAAATCTGCTTCATCCAGTGCGAACGAGTTTGAGGAGTCATCGGATAGTGCATTGGGACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAGGAAAACAACATAAACACGCACCAGCATCTGCATTAG MAPNSNQQSQELLVLVAFNGLGHHRVVSSSSSLSCFCEFETDALESQLSRSLPFSAFGVSASGSESCEMGRTPCCDKKGLKKGPWTSEEDELLINYIKENNGHGSWRSLPKLAGLFLHMGSTKKFHEQLGGNDFVLCSTFFDLSLTLDGMVCLRDLFILGLLRCGKSCRLRWTNYLRPDIKRGPFTPEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLLCIGIDPQTHEPFNSRCSSSTAPASPTTRHMAQWESARLEAEARLSRESSLFTPLLMERTTDSDFFLQIWNSEVGESFRRCREDKTTCQSQSPLSSSIKCESLFIVATHNRVDYTGSSAMESNENEETDYKNFQSMADIVTSKSASSSANEFEESSDSALGLLLDFPINNDMSFLEENNINTHQHLH
BLAST of ClCG05G001640 vs. Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 8.5e-35 Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 1
HSP 2 Score: 67.0 bits (162), Expect = 5.5e-10 Identity = 30/47 (63.83%), Postives = 33/47 (70.21%), Query Frame = 1
BLAST of ClCG05G001640 vs. Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 7.2e-34 Identity = 69/115 (60.00%), Postives = 83/115 (72.17%), Query Frame = 1
HSP 2 Score: 69.7 bits (169), Expect = 8.6e-11 Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1
BLAST of ClCG05G001640 vs. Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 9.4e-34 Identity = 64/121 (52.89%), Postives = 83/121 (68.60%), Query Frame = 1
HSP 2 Score: 67.0 bits (162), Expect = 5.5e-10 Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 1
BLAST of ClCG05G001640 vs. Swiss-Prot
Match: MYB34_ARATH (Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.6e-33 Identity = 96/257 (37.35%), Postives = 136/257 (52.92%), Query Frame = 1
HSP 2 Score: 60.8 bits (146), Expect = 4.0e-08 Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 1
BLAST of ClCG05G001640 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.0e-32 Identity = 64/100 (64.00%), Postives = 76/100 (76.00%), Query Frame = 1
HSP 2 Score: 64.7 bits (156), Expect = 2.8e-09 Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 1
BLAST of ClCG05G001640 vs. TrEMBL
Match: A0A0D2NAE8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G169700 PE=4 SV=1) HSP 1 Score: 362.8 bits (930), Expect = 5.4e-97 Identity = 200/342 (58.48%), Postives = 233/342 (68.13%), Query Frame = 1
BLAST of ClCG05G001640 vs. TrEMBL
Match: V4TDD2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021268mg PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 1.5e-91 Identity = 177/254 (69.69%), Postives = 208/254 (81.89%), Query Frame = 1
BLAST of ClCG05G001640 vs. TrEMBL
Match: V4TDD2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021268mg PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 5.2e-15 Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 1
HSP 2 Score: 344.7 bits (883), Expect = 1.5e-91 Identity = 177/254 (69.69%), Postives = 208/254 (81.89%), Query Frame = 1
BLAST of ClCG05G001640 vs. TrEMBL
Match: A0A067H2J7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021486mg PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 5.2e-15 Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 1
HSP 2 Score: 340.5 bits (872), Expect = 2.9e-90 Identity = 180/263 (68.44%), Postives = 205/263 (77.95%), Query Frame = 1
BLAST of ClCG05G001640 vs. TrEMBL
Match: A0A061E159_THECC (Myb domain protein 17 isoform 1 OS=Theobroma cacao GN=TCM_005371 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 4.9e-90 Identity = 179/263 (68.06%), Postives = 205/263 (77.95%), Query Frame = 1
BLAST of ClCG05G001640 vs. TAIR10
Match: AT3G61250.1 (AT3G61250.1 myb domain protein 17) HSP 1 Score: 281.2 bits (718), Expect = 1.1e-75 Identity = 154/257 (59.92%), Postives = 181/257 (70.43%), Query Frame = 1
HSP 2 Score: 85.5 bits (210), Expect = 8.5e-17 Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 1
BLAST of ClCG05G001640 vs. TAIR10
Match: AT3G01140.1 (AT3G01140.1 myb domain protein 106) HSP 1 Score: 186.4 bits (472), Expect = 3.5e-47 Identity = 108/232 (46.55%), Postives = 138/232 (59.48%), Query Frame = 1
HSP 2 Score: 73.2 bits (178), Expect = 4.4e-13 Identity = 32/44 (72.73%), Postives = 36/44 (81.82%), Query Frame = 1
BLAST of ClCG05G001640 vs. TAIR10
Match: AT5G15310.1 (AT5G15310.1 myb domain protein 16) HSP 1 Score: 175.6 bits (444), Expect = 6.2e-44 Identity = 102/210 (48.57%), Postives = 127/210 (60.48%), Query Frame = 1
HSP 2 Score: 79.0 bits (193), Expect = 7.9e-15 Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 1
BLAST of ClCG05G001640 vs. TAIR10
Match: AT4G01680.2 (AT4G01680.2 myb domain protein 55) HSP 1 Score: 168.3 bits (425), Expect = 1.0e-41 Identity = 89/174 (51.15%), Postives = 107/174 (61.49%), Query Frame = 1
BLAST of ClCG05G001640 vs. TAIR10
Match: AT4G21440.1 (AT4G21440.1 MYB-like 102) HSP 1 Score: 149.8 bits (377), Expect = 3.7e-36 Identity = 97/264 (36.74%), Postives = 134/264 (50.76%), Query Frame = 1
HSP 2 Score: 74.3 bits (181), Expect = 2.0e-13 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 1
BLAST of ClCG05G001640 vs. NCBI nr
Match: gi|659077729|ref|XP_008439352.1| (PREDICTED: transcription factor MYB34-like [Cucumis melo]) HSP 1 Score: 504.2 bits (1297), Expect = 2.2e-139 Identity = 248/260 (95.38%), Postives = 253/260 (97.31%), Query Frame = 1
BLAST of ClCG05G001640 vs. NCBI nr
Match: gi|449432165|ref|XP_004133870.1| (PREDICTED: transcription repressor MYB6 [Cucumis sativus]) HSP 1 Score: 503.1 bits (1294), Expect = 4.8e-139 Identity = 248/262 (94.66%), Postives = 253/262 (96.56%), Query Frame = 1
BLAST of ClCG05G001640 vs. NCBI nr
Match: gi|449432165|ref|XP_004133870.1| (PREDICTED: transcription repressor MYB6 [Cucumis sativus]) HSP 1 Score: 105.5 bits (262), Expect = 2.2e-19 Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 1
HSP 2 Score: 362.8 bits (930), Expect = 7.8e-97 Identity = 200/342 (58.48%), Postives = 233/342 (68.13%), Query Frame = 1
BLAST of ClCG05G001640 vs. NCBI nr
Match: gi|567905200|ref|XP_006445088.1| (hypothetical protein CICLE_v10021268mg [Citrus clementina]) HSP 1 Score: 344.7 bits (883), Expect = 2.2e-91 Identity = 177/254 (69.69%), Postives = 208/254 (81.89%), Query Frame = 1
BLAST of ClCG05G001640 vs. NCBI nr
Match: gi|567905200|ref|XP_006445088.1| (hypothetical protein CICLE_v10021268mg [Citrus clementina]) HSP 1 Score: 90.5 bits (223), Expect = 7.5e-15 Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 1
HSP 2 Score: 340.5 bits (872), Expect = 4.1e-90 Identity = 180/263 (68.44%), Postives = 205/263 (77.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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