Cp4.1LG03g16880 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGTAACTATGCTTTGTTTCAGTATTTATCTCTTTTAGTTTAGACTCATTTTGACTCGATTATTGTTGAAATCGTGTGAATTATTGTCTTCTGTTTATAGTGGCGATTACTATCAGTGAACAATTCCTATTATTAATATTTAATCTGATCCTAAATAGAATATGCACAAACGAAGTCTGTTCAAATTTTAGATAGGAAAAAAGTATGGTCGATGAATTTGTGTACAAAAGTATGCTCAATGAATTTGTGTATTTTAGGCACAGACGCATGTTTTGTAATCTAACATAATCTTAATCAGGGGGAGTTTTCTCACAATTTAGAGCTTCCTACAAAAATTAGGCAGGGAAGTTCACTGATCATGAAGTTCCAGCTAAAAATCAGGTTTGTTTTGTTTTCTTGTTTAGCAATCAGATTGGAAGAGGGAAGAGGGAAGAGGAAATTTTGAAAGACCCACAAGGAAACAATGGCGAAGGCCTGGTCTTGTCATGGTATGTCCCGTACCCTGTATGTCATTTTCATCATAGTAAATGCGTCTCAAAATCTCTCTCTGTTCAATAAATGCTAGTCTGCATTGTGAGAATCCGCAATAAATTCTTCTCCTTATTCGCTTATTTCTTATATCAGTTGTGCGCAATTGTAAAACCTCAGAATAAGAAACCTCTGTATTAACTCCCTCAATTTTTTGGACAAATTTTACTTTCAATGATGATTCAATTCTTACTATGCTCAACCATGTCAGTATTTATTGCAAGAACCAGCTTGAAACTAGCTGATTCTTGTCCTTCCCCTTCAGACTCACATAGCCATTAACTTCCCTCTTTTAATTTCAGTTCATTGAGATAAACCCTTTCACATGGCTTCCCTCCCCTCCTCCCTCTGTATTCGCTCTGAAAAATTGATGCTCTAAGGGAAGGCTCTGAACTTTTTCTTTCGCTCTTGGTCACTAGAGGGGGTGTCTCTGCCTCTGGTAGTGAAAATTGTGAGATGGGAAGGACGCCTTGTTGTGATAAGAAGGGGCTAAAGAAAGGGCCGTGGACATCAGAAGAAGATGAGCTCCTTATTAATTATATTAAGAAAAACAATGGCCATGGTAGCTGGAGATCGCTCCCCAAGCTTGCAGGTTTAGTGATCCAAAATTTTCCCTAGTTCCCACTTGTCATCTCTCATTCTGAAGTCTCTTTTTATTATTGTAACTTCTGGAACATATTCCTTCCTTCTTAACTTCGAAATTTATTGTAACTGGACTGATTAAAGAAAAGGAAAAAGAAGGAAGAAGAAGAACCTTGAGTAGTAAGTCCTTTACCCTGACCTTTTCCCTTTCACTCTCCTCATATCCCTCCCGTTCTCATTTTCTCCGATCTCATAGATTTAACAACAGCTAAGTTTCGTGCTTTGTTACCAAACAGTGTGCAGAAAAAGGTTTTAGCATCATTTTGAATCTTTTGTTCTGGTAATTTTTAGTCTGCATAAACCGTTTTGTATTGCCCTGCAAATGGTGCCTAAGTCCATACTTTTTTCTGCAAACTCTCTTCTTGTCATGGAATGGCTGCTTGCCTCGACCATCCTTCAAAATAAGTATAGTTGGTCTTTTGATTTGTCTCTAGTTTCGGATTTCGCCTCCAGTGTGATCTTGAGATTCCGAGGTTTGTCACCTGTACTGAGCATTTCTTTACTCAAACTTATTCTGTTCAAAATCCTTGTTCTTACACATGGGAAGCACCAAAAATTTTCTTGCACAATTGGGAGGGGACGATTTTTGTCTTATGTTCTTCATTATTTAATTTGTCTCTCACATTGGATGGGATGGTCTCTGTACTTGATTTGTTTATAGGCCTTCTACGGTGTGGGAAGAGCTGCCGTTTAAGGTGGACAAACTATCTAAGACCTGACATCAAACGTGGCCCCTTTACCCCTGAGGAAGAGAAGCTTGTTATTCAGCTTCATGGAATTCTTGGAAACAGGTGATGCTTCATTGTTTTCTTCCTGAATGTTATCATAGATAGATATGGCTGCCTAAATTTATGGTATCTTTTGTTTAATCGTCTCTGAACCACTATTTAATTCAAATTATGTCTATGTTACCTTTTGGCTAATCGTTTGATATTTTGCTATATGTTCATGCTGTACTACACAATTAACAGTTAGACGTTTGAATAGAGAAAGGTGTTTAGCTCGTGGAACTACTTTCAAGAAAACTCAAGGCTTAGTCTCGACTCTAGATGCTAGTTTGGAGAACCTGGAGGCCGATCATATATTAATTGGTTGTTTGCTTTAGTGAGGTTTCGAGACTTTTTTTTTTTAAGATCAGAAAAAACATCAACAAATATGTTTTATGATGGAATTTGACGATTGTTTCTCTTCAACTATTTGGTGCATTATGAATGTTGTTTGATGGAGTTTTACTGATCAAGACTCCTTGCAGGTGGGCTGCCATTGCTTCTCAACTGCCTGGAAGGACAGATAATGAAATCAAGAACTTATGGAACACCCACCTGAAGAAACGCCTTCTTTGCATTGGCATTGATCCACAGACACATGAACCCTTCAATTCTCGCTGCTCATCCTCTACAGCACCGGCATCCCCAACCACCCGCCACATGGCACAGTGGGAGAGTGCTCGGCTCGAAGCCGAAGCTCGACTTTCAAGGGAGTCATCACTCTTCACTCCACTTCCCATGGAAACGACGACCGATTCTGACTTTTTTCTTCAAATATGGAACTCTGAAGTAGGCGATTCGTTTCGTAAGTGCAGGGAAGACAAAACCACATGCCATAGCCAGAGTTCCCTGTCCTCATCAATCAAATGCGAGTCGGTTTACATTGTTGCGACCCATAACGGAGTCGATTACACCGGTTCCTCAGCCATGGAAAGCAACGAAAACGAAGAAACAGAATACAAAAACTTCAAATCCATGGCTGACATTGTGATGTCCAAGTCTGATTCTTCAAGTGCGAACGAGTTCGAGGAGTCGTCGGATAGTGCATTAGAACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAAGAAAACAACACGAACACTTAG ATGAAGGGGGAGTTTTCTCACAATTTAGAGCTTCCTACAAAAATTAGGCAGGGAAGTTCACTGATCATGAAGTTCCAGCTAAAAATCAGCAATCAGATTGGAAGAGGGAAGAGGGAAGAGGAAATTTTGAAAGACCCACAAGGAAACAATGGCGAAGGCCTGGTCTTGTCATGTTTCGGATTTCGCCTCCAGTGTGATCTTGAGATTCCGAGGGAAGACAAAACCACATGCCATAGCCAGAGTTCCCTGTCCTCATCAATCAAATGCGAGTCGGTTTACATTGTTGCGACCCATAACGGAGTCGATTACACCGGTTCCTCAGCCATGGAAAGCAACGAAAACGAAGAAACAGAATACAAAAACTTCAAATCCATGGCTGACATTGTGATGTCCAAGTCTGATTCTTCAAGTGCGAACGAGTTCGAGGAGTCGTCGGATAGTGCATTAGAACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAAGAAAACAACACGAACACTTAG ATGAAGGGGGAGTTTTCTCACAATTTAGAGCTTCCTACAAAAATTAGGCAGGGAAGTTCACTGATCATGAAGTTCCAGCTAAAAATCAGCAATCAGATTGGAAGAGGGAAGAGGGAAGAGGAAATTTTGAAAGACCCACAAGGAAACAATGGCGAAGGCCTGGTCTTGTCATGTTTCGGATTTCGCCTCCAGTGTGATCTTGAGATTCCGAGGGAAGACAAAACCACATGCCATAGCCAGAGTTCCCTGTCCTCATCAATCAAATGCGAGTCGGTTTACATTGTTGCGACCCATAACGGAGTCGATTACACCGGTTCCTCAGCCATGGAAAGCAACGAAAACGAAGAAACAGAATACAAAAACTTCAAATCCATGGCTGACATTGTGATGTCCAAGTCTGATTCTTCAAGTGCGAACGAGTTCGAGGAGTCGTCGGATAGTGCATTAGAACTGCTTCTGGACTTCCCCATTAACAATGACATGAGCTTCTTGGAAGAAAACAACACGAACACTTAG MKGEFSHNLELPTKIRQGSSLIMKFQLKISNQIGRGKREEEILKDPQGNNGEGLVLSCFGFRLQCDLEIPREDKTTCHSQSSLSSSIKCESVYIVATHNGVDYTGSSAMESNENEETEYKNFKSMADIVMSKSDSSSANEFEESSDSALELLLDFPINNDMSFLEENNTNT
BLAST of Cp4.1LG03g16880 vs. TrEMBL
Match: A0A0A0L8X9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122500 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 3.7e-36 Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 1
BLAST of Cp4.1LG03g16880 vs. TrEMBL
Match: A0A067H2J7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021486mg PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.7e-17 Identity = 54/95 (56.84%), Postives = 73/95 (76.84%), Query Frame = 1
BLAST of Cp4.1LG03g16880 vs. TrEMBL
Match: V4TDD2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021268mg PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 8.7e-17 Identity = 54/95 (56.84%), Postives = 73/95 (76.84%), Query Frame = 1
BLAST of Cp4.1LG03g16880 vs. TrEMBL
Match: A0A061DT85_THECC (Myb domain protein 17 isoform 2 OS=Theobroma cacao GN=TCM_005371 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14 Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 1
BLAST of Cp4.1LG03g16880 vs. TrEMBL
Match: A0A061E159_THECC (Myb domain protein 17 isoform 1 OS=Theobroma cacao GN=TCM_005371 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.4e-14 Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 1
BLAST of Cp4.1LG03g16880 vs. NCBI nr
Match: gi|659077729|ref|XP_008439352.1| (PREDICTED: transcription factor MYB34-like [Cucumis melo]) HSP 1 Score: 164.9 bits (416), Expect = 1.3e-37 Identity = 89/102 (87.25%), Postives = 95/102 (93.14%), Query Frame = 1
BLAST of Cp4.1LG03g16880 vs. NCBI nr
Match: gi|449432165|ref|XP_004133870.1| (PREDICTED: transcription repressor MYB6 [Cucumis sativus]) HSP 1 Score: 159.5 bits (402), Expect = 5.4e-36 Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 1
BLAST of Cp4.1LG03g16880 vs. NCBI nr
Match: gi|700201393|gb|KGN56526.1| (hypothetical protein Csa_3G122500 [Cucumis sativus]) HSP 1 Score: 159.5 bits (402), Expect = 5.4e-36 Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 1
BLAST of Cp4.1LG03g16880 vs. NCBI nr
Match: gi|567905200|ref|XP_006445088.1| (hypothetical protein CICLE_v10021268mg [Citrus clementina]) HSP 1 Score: 95.1 bits (235), Expect = 1.2e-16 Identity = 54/95 (56.84%), Postives = 73/95 (76.84%), Query Frame = 1
BLAST of Cp4.1LG03g16880 vs. NCBI nr
Match: gi|590722298|ref|XP_007051856.1| (Myb domain protein 17 isoform 1 [Theobroma cacao]) HSP 1 Score: 87.8 bits (216), Expect = 2.0e-14 Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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