Cla021235 (gene) Watermelon (97103) v1

NameCla021235
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionProtein PAIR1 (AHRD V1 *-*- PAIR1_ORYSJ)
LocationChr5 : 1451737 .. 1454061 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTAAGTTCACTATCTTGGACTCATATGACAGACTTAAAACTGTTCCAATAAGTTCGTTTAAAACTGTTTCAATAAGTTCGTTTGATTTCATTACAGCGTGGTATAACTGTTTGAGTAGGGTAAGTTGATCAACTGCCATTTCTTACAACCTTTATATCTTTCGTGACTTGATTCCATAGTTTAGCTTTCCTTTTCAGGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGGTGAGCTTTGCAATCCCTCAGGCTGTAAAGTAAAGTTGGATGAGAAACTATGTATTACTGCTTGAAAAACACTTTCTGCACTGAAACCTGATGTGTTTGTTCCTCAAGTAGGAACAAAGGTGATGAATATGCTTTATTTGAATTTCAATTCCTTCATAAAGTAGGATTAAGATTGCTATGTTATGAATGTGTAAAGGGAAAGTGCTCAAATCAGTACAGAATCCTGACCTCAAATTTGAAGCTTCAAGGCAAAAGTATATTAAAATAATATGCTTATTTATTTTTCAAATTGCAGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGGTAAAATTGTACTAGATCAATACAATATTTTATTGACCATTAAGTTTCTTTAATTTTAATTGTAATGTCTAAATTGTGCATTCAACTAATGAGCGCAAAGTTCAATGTCAGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCACACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTACAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGTCAGTGCATGTTGTATCAAGTATTGCTATAAATGTACGATAAAAAGGATTTGCCTCCTAACTCCATTCCGGCTATTTATACATATTCGTAAAAGTACCCTGCCTAAATTTGTATTCTACTTATTCTTCATTAACTTGTAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATCCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCATCGCAAAAGCGACATCGATGTAAAATGTATGAATTTCAGGTTTCATAATAACTAACTTGATTCCTTGTGTTTTCATCCATTTCAGATGCAGAAAGTTGTCATATTATAAATGAATAAATTACTGATAATGGTGAATGGGATTAGATTGAATTGATATATTCCAATCTGAGAGTTCAACTTTCCCTTCTAATGCACAAAATGTAGAATTAGTGACCTACAAGAGCTCAATGGTATCTTCCATTCCCGTATATTTTACGGCTCTGATTTATAGCAGTCTGGAAGTTCTCAAGGGGATTATGTGTTATATTCCATTAAATACTATCATATTCCATACGTAGTATAAGCGAGGAGGAAAGAAATTTCCATTTGTCGGTAATGTTATCTTAATGTGGCATGAAAAATCATACTCTTGAGCAGCCACAGTATTCTGGTGATTGTTGATGAACTATGGAATTATATGTATTGGTTCTTTGTTGCTTAGCATCTTAAGAGAACTTACTTTTTCCACTTAATATCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGTAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGGTACCGATTTGAATTTCATTATGTTTCCTGCTATCACATTACCATTTATTGCGGAAATTGTGCAATTGCATTTTTGATAGCCAATATTAAGTTATTCCTTGATTATTGAACCCGAAATTTACACATTATTCTATGAAGCGAGTAATGATTTCACCTTGGATATTAGCAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA

mRNA sequence

ATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGCGCAAAGTTCAATGTCAGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCACACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTACAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATCCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCATCGCAAAAGCGACATCGATGTAAAATGTATGAATTTCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGTAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA

Coding sequence (CDS)

ATGGCACTCTCTAAATCTTCAACCAGTCTAACACAAAGATGGAAATCAACTCCTCTTCCGGACTCTAAGTGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGGATGAAGCAAGTTTCTCTGGATGTGGAAGGCATATGGCAAAAGATGCTTGTTAACAGTAGCTCGCTACAATCCATGCGCAAAGTTCAATGTCAGAACAAAGAGCACGATGACATGAAAGCTACCCTCGATGGAGGCTTCAAATTGATATCCGATCTGCTTAAGAAGGATGCACACCAAGAAAGGCTACATGAGATTTCCGATGTTCTTTCTTCATTGGAAAAGCAAGTACAAGCATCTCAACTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAAGGCAATTGTCTGTACCTTGAAGAACCCCTTGCAGAAATTTCCACCTCGCTCTATCCAATCTCCTGAGGTTCGGTTTCTTACGAAATATCGGTCAAATGTCTTAGGCGTTTGTTTCATCCTGAACTGTGTCTCATGGAAGGATTTAATTGCAAATGTCAGGGTACTGCCTGTTTGGATGTTCCATCGCAAAAGCGACATCGATGTAAAATGTATGAATTTCAGTCAATCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAAGGAGGAAGTAGGACGGTGGAAATCAGTAAAAGTGGGAAAGACGTTTTGCACTAGTAGTGTGGTGAAAAAGGATGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCTTGGTGCTGGAAAGGGAATATAGAGTTATTGTTGATTCCGATGAGGAGATTGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA

Protein sequence

MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEVRFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCMNFSQSASPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS
BLAST of Cla021235 vs. Swiss-Prot
Match: PAIR1_ORYSJ (Protein PAIR1 OS=Oryza sativa subsp. japonica GN=PAIR1 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.8e-13
Identity = 59/197 (29.95%), Postives = 101/197 (51.27%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQV-GEELDRRLGTIENSLNKFGKILDSLHSDILQLN 60
           + L+K  ++   RW  +       QV  E+++R+   + +S++K G ++DS+ SD++QLN
Sbjct: 118 LQLAKLPSNPVHRWNPSIADTRSGQVTNEDVERKFQHLASSVHKMGMVVDSVQSDVMQLN 177

Query: 61  KGMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLK-KDA 120
           + MK+ SLD   I QK+ V  SSLQ + K Q      DD+KA      K   D     ++
Sbjct: 178 RAMKEASLDSGSIRQKIAVLESSLQQILKGQ------DDLKALFGSSTKHNPDQTSVLNS 237

Query: 121 HQERLHEISDVLSSLEKQVQASQLKLKNDFI----STFTQEMKAIVCTLKNPLQKFPPRS 180
              +L+EIS  L++L+ Q+QA QL+     +    ++ + E+ + + TL+  +Q    R 
Sbjct: 238 LGSKLNEISSTLATLQTQMQARQLQGDQTTVLNSNASKSNEISSTLATLQTQMQA-DIRQ 297

Query: 181 IQSPEVRFLTKYRSNVL 192
           ++    R  TK    V+
Sbjct: 298 LRCDVFRVFTKEMEGVV 307

BLAST of Cla021235 vs. TrEMBL
Match: A0A0A0L487_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122370 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.6e-88
Identity = 192/320 (60.00%), Postives = 222/320 (69.38%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           + +SKSSTSLTQ+W+ +PLPDSKCQVGEELDRRLGTIENS+NKFGKILDSL SDILQLNK
Sbjct: 96  LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNK 155

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           GMKQVSLDVE IWQKML+NSSSLQSM      NK+HDDMKA +DGGFKLISD LKKDA+Q
Sbjct: 156 GMKQVSLDVESIWQKMLINSSSLQSM------NKDHDDMKAIIDGGFKLISDQLKKDAYQ 215

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           ERLHEIS                   DF+S+  ++++A    LKN               
Sbjct: 216 ERLHEIS-------------------DFLSSLEKQVQASQLKLKND-------------- 275

Query: 181 RFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDV------KCMNFSQSA 240
            F++ +   +  +   L     K+ +       +      + +DV      +C    QSA
Sbjct: 276 -FISTFTKEMKAMICTL-----KNPLQKFPPHSIQSPESNACLDVPKQKQRRCK--IQSA 335

Query: 241 SPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE-QCLVLEREYRVI 300
           +PNVC +AT VQKEEVG WKSVKVGK FCTSSVVK+DDP KVIPFSE QCLVLEREYRVI
Sbjct: 336 APNVCTQATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQCLVLEREYRVI 368

Query: 301 VDSDEEIERSFSCLIEEKKT 314
           VDSDEEIERSFSCLIEEKKT
Sbjct: 396 VDSDEEIERSFSCLIEEKKT 368

BLAST of Cla021235 vs. TrEMBL
Match: A9P914_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16140g PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 8.1e-45
Identity = 112/314 (35.67%), Postives = 176/314 (56.05%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           + +S+SS++L + W + P+PD K Q+ EEL  R+G +E SL KFG ILDS+ SD++Q+ K
Sbjct: 102 LPISRSSSNLIRNWSAAPVPDHKYQINEELHHRIGMMETSLTKFGMILDSVQSDLMQVKK 161

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           G+K+VSL+ EG+ QK++V  +SL+        N   +D+K +L+G  K +S+ L KD +Q
Sbjct: 162 GIKEVSLETEGMLQKLIVLDTSLK------LTNTGQEDVKFSLEGSLKSLSEQLSKDRYQ 221

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           + L +I  VLS+L KQ++    KL+N+  +TFT+E++A+ C++K PL +  P        
Sbjct: 222 DNLQQIFLVLSTLPKQMEMFLYKLQNELCTTFTKEIQAMACSVKTPLDQKSP-------- 281

Query: 181 RFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCMNFSQSASPNVCI 240
                       +  +L  V+   +    R  PV                + +  P V +
Sbjct: 282 -----------SITVVLPKVTGNHVTPPRRTEPVK---------------NPALPPKVSV 341

Query: 241 RATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEEI 300
            A  V K E G WKSVKV +   T +   ++  +  +   +Q    E++ RVI+DSDEEI
Sbjct: 342 HAKIVPKMETGGWKSVKVEQRSFTRAASLREQKRNKVSSDQQ----EKQSRVIIDSDEEI 371

Query: 301 ERSFSCLIEEKKTG 315
           E  FSCLI+ K+TG
Sbjct: 402 EGGFSCLIDVKETG 371

BLAST of Cla021235 vs. TrEMBL
Match: W9S0R0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017269 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 4.0e-44
Identity = 117/316 (37.03%), Postives = 176/316 (55.70%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           M +S+SST+L ++W ST L +++CQ  EEL+ R+G +E SLN+FG ILDS+ SD++Q+NK
Sbjct: 163 MHISRSSTNLMRKWGSTSLSENRCQTSEELEHRIGLMETSLNRFGMILDSVQSDVIQVNK 222

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           G K+V ++  GI QK++V  +SLQ M      +KE +DMKA+LDGGFK I + + K  +Q
Sbjct: 223 GTKEVLMETVGIRQKLVVQENSLQLM------SKEQEDMKASLDGGFKSIFEQVNKHTYQ 282

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           ++  EI  VLS+L ++++AS  KL+                            SIQ    
Sbjct: 283 DKFQEILSVLSALPEKLEASPEKLE---------------------------ASIQKSRT 342

Query: 181 RFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCMNFSQSA-SPNVC 240
                +  ++      L     KD + ++  LP  +    S  + K    + SA  P VC
Sbjct: 343 ELHNSFTKDIQASACSLRIPKRKDQVPSI--LPPKVNSSYSAPEEKPQPITDSAVPPKVC 402

Query: 241 IRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVDSDEE 300
           ++AT V K E G WKSVK GK+  T     K   +K +   ++   + RE RVI++SDEE
Sbjct: 403 VQATVVPKIETGGWKSVKSGKSASTHKASNKVPNQKGVSSIQK--EIGRECRVIIESDEE 441

Query: 301 IERSFSCLIEEKKTGD 316
           I+  FSCL++E K G+
Sbjct: 463 IDGVFSCLLKENKPGN 441

BLAST of Cla021235 vs. TrEMBL
Match: A0A067JXJ9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14393 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 87/180 (48.33%), Postives = 126/180 (70.00%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           M +S+SST++ +RW +  +PD KCQ+ EEL+ R+G IE SLNKFG ILDS+ SD++Q+NK
Sbjct: 101 MPISRSSTNVMRRWNTASVPDHKCQINEELEHRIGMIETSLNKFGMILDSVQSDVMQVNK 160

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           G K++SL++EGI QK++   +SLQ M   Q      +D+K++LDG  K IS+ L+KD  Q
Sbjct: 161 GTKEISLEMEGIRQKLVALDASLQLMITGQ------EDIKSSLDGNLKSISERLRKDICQ 220

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           ++L +I  VLS L  Q++AS LKL+ +   TFT+EM+A  C LK P Q  P  ++ SP+V
Sbjct: 221 DKLKQIFLVLSVLPNQMEASLLKLQQEICMTFTKEMQASACKLKTPNQNSPSITVLSPKV 274

BLAST of Cla021235 vs. TrEMBL
Match: A0A067JXJ9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14393 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 9.3e-33
Identity = 103/317 (32.49%), Postives = 168/317 (53.00%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           M +S+SST++ +RW +  +PD KCQ+ EEL+ R+G IE SLNKFG ILDS+ SD++Q+NK
Sbjct: 101 MPISRSSTNVMRRWNTASVPDHKCQINEELEHRIGMIETSLNKFGMILDSVQSDVMQVNK 160

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           G K++SL++EGI QK++   +SLQ M   Q      +D+K++LDG  K IS+ L+KD  Q
Sbjct: 161 GTKEISLEMEGIRQKLVALDASLQLMITGQ------EDIKSSLDGNLKSISERLRKDICQ 220

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           ++L +I  VLS L                     +M+A +  L+  +     + +Q+   
Sbjct: 221 DKLKQIFLVLSVLPN-------------------QMEASLLKLQQEICMTFTKEMQASAC 280

Query: 181 RFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDVKCMNFSQSASPNVCI 240
           +  T  ++            S    + + +V   +   ++    ++    + +  P    
Sbjct: 281 KLKTPNQN------------SPSITVLSPKVTGCYGTSQRKPHLLR----NPAIPPKTSG 340

Query: 241 RATAVQKEEVGRWKSVKVGKT-FCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIVD-SDE 300
           + T   K E+G W +V+  KT F   +  K+   K+     +  L  ER   VI++ SDE
Sbjct: 341 QTTVCPKIEMGAWNTVRPEKTKFTQKASCKEQKCKEASSVQKVVLTQERRCSVIIETSDE 376

Query: 301 EIERSFSCLIEEKKTGD 316
           EI+  FSCLI+ K+TG+
Sbjct: 401 EIDGGFSCLIDVKETGN 376


HSP 2 Score: 151.8 bits (382), Expect = 1.4e-33
Identity = 75/159 (47.17%), Postives = 111/159 (69.81%), Query Frame = 1

Query: 5   KSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQ 64
           + ST++ ++W     PD +CQV EEL+RRLG +E SLN+ G  LDS+ SDI+Q+N+G K+
Sbjct: 102 RCSTNVVRKWNPASAPDQRCQVSEELERRLGLMETSLNRIGINLDSVQSDIMQVNRGSKE 161

Query: 65  VSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQERLH 124
           + L+VEGI QK++V  +SLQ M +   QNK  +D+K  LDGG K +SD L KD ++++  
Sbjct: 162 ILLEVEGISQKLIVQDTSLQLMLRYCHQNKGQEDIKTGLDGGLKSLSDQLGKDIYEDKFK 221

Query: 125 EISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTL 164
           EI   LSSL K+++AS LKL+N+  S  T++MKA +  +
Sbjct: 222 EIFLELSSLPKKIEASLLKLQNELFSFLTEQMKACMINI 260

BLAST of Cla021235 vs. NCBI nr
Match: gi|659075258|ref|XP_008438048.1| (PREDICTED: protein PAIR1 isoform X3 [Cucumis melo])

HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89
Identity = 196/320 (61.25%), Postives = 221/320 (69.06%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           + LSKSSTSLTQ+W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNK
Sbjct: 101 LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNK 160

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           GMKQVSLDVE IWQKMLVNSS LQSM      NK+HDDMKA +DGGFKLISD LKKDA+Q
Sbjct: 161 GMKQVSLDVESIWQKMLVNSSLLQSM------NKDHDDMKAIIDGGFKLISDQLKKDAYQ 220

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           ERLHEISD                   F+S+  ++++A    LKN               
Sbjct: 221 ERLHEISD-------------------FLSSLEKQVQASQLKLKND-------------- 280

Query: 181 RFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDV------KCMNFSQSA 240
            F++ +   +  +   L     K  +       +    R + +DV      +C    QSA
Sbjct: 281 -FISTFTKEMKAMISTL-----KKPLQKFPPHSIQSPERTACLDVPKQKRHRCK--IQSA 340

Query: 241 SPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSEQCLVLEREYRVIV 300
           SPNVC +ATAVQKEEVG WKSVKVGK FCTSSVV +DDP KVIPFSEQCLVLEREYRVIV
Sbjct: 341 SPNVCTQATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQCLVLEREYRVIV 373

Query: 301 DSDEEIERSFSCLIEEKKTG 315
           DSDEEIERSFSCLIEEKKTG
Sbjct: 401 DSDEEIERSFSCLIEEKKTG 373

BLAST of Cla021235 vs. NCBI nr
Match: gi|778677212|ref|XP_011650752.1| (PREDICTED: protein PAIR1 isoform X2 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 1.3e-88
Identity = 193/321 (60.12%), Postives = 223/321 (69.47%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           + +SKSSTSLTQ+W+ +PLPDSKCQVGEELDRRLGTIENS+NKFGKILDSL SDILQLNK
Sbjct: 101 LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNK 160

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           GMKQVSLDVE IWQKML+NSSSLQSM      NK+HDDMKA +DGGFKLISD LKKDA+Q
Sbjct: 161 GMKQVSLDVESIWQKMLINSSSLQSM------NKDHDDMKAIIDGGFKLISDQLKKDAYQ 220

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           ERLHEIS                   DF+S+  ++++A    LKN               
Sbjct: 221 ERLHEIS-------------------DFLSSLEKQVQASQLKLKND-------------- 280

Query: 181 RFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDV------KCMNFSQSA 240
            F++ +   +  +   L     K+ +       +      + +DV      +C    QSA
Sbjct: 281 -FISTFTKEMKAMICTL-----KNPLQKFPPHSIQSPESNACLDVPKQKQRRCK--IQSA 340

Query: 241 SPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE-QCLVLEREYRVI 300
           +PNVC +AT VQKEEVG WKSVKVGK FCTSSVVK+DDP KVIPFSE QCLVLEREYRVI
Sbjct: 341 APNVCTQATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQCLVLEREYRVI 374

Query: 301 VDSDEEIERSFSCLIEEKKTG 315
           VDSDEEIERSFSCLIEEKKTG
Sbjct: 401 VDSDEEIERSFSCLIEEKKTG 374

BLAST of Cla021235 vs. NCBI nr
Match: gi|778677209|ref|XP_004134325.2| (PREDICTED: protein PAIR1 isoform X1 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 1.7e-88
Identity = 193/322 (59.94%), Postives = 223/322 (69.25%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           + +SKSSTSLTQ+W+ +PLPDSKCQVGEELDRRLGTIENS+NKFGKILDSL SDILQLNK
Sbjct: 101 LGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGTIENSVNKFGKILDSLLSDILQLNK 160

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           GMKQVSLDVE IWQKML+NSSSLQSM      NK+HDDMKA +DGGFKLISD LKKDA+Q
Sbjct: 161 GMKQVSLDVESIWQKMLINSSSLQSM------NKDHDDMKAIIDGGFKLISDQLKKDAYQ 220

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           ERLHEIS                   DF+S+  ++++A    LKN               
Sbjct: 221 ERLHEIS-------------------DFLSSLEKQVQASQLKLKND-------------- 280

Query: 181 RFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDV------KCMNFSQSA 240
            F++ +   +  +   L     K+ +       +      + +DV      +C    QSA
Sbjct: 281 -FISTFTKEMKAMICTL-----KNPLQKFPPHSIQSPESNACLDVPKQKQRRCK--IQSA 340

Query: 241 SPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE--QCLVLEREYRV 300
           +PNVC +AT VQKEEVG WKSVKVGK FCTSSVVK+DDP KVIPFSE  QCLVLEREYRV
Sbjct: 341 APNVCTQATGVQKEEVGMWKSVKVGKAFCTSSVVKRDDPNKVIPFSEQQQCLVLEREYRV 375

Query: 301 IVDSDEEIERSFSCLIEEKKTG 315
           IVDSDEEIERSFSCLIEEKKTG
Sbjct: 401 IVDSDEEIERSFSCLIEEKKTG 375

BLAST of Cla021235 vs. NCBI nr
Match: gi|659075256|ref|XP_008438047.1| (PREDICTED: protein PAIR1 isoform X2 [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 3.8e-88
Identity = 196/321 (61.06%), Postives = 221/321 (68.85%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           + LSKSSTSLTQ+W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNK
Sbjct: 101 LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNK 160

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           GMKQVSLDVE IWQKMLVNSS LQSM      NK+HDDMKA +DGGFKLISD LKKDA+Q
Sbjct: 161 GMKQVSLDVESIWQKMLVNSSLLQSM------NKDHDDMKAIIDGGFKLISDQLKKDAYQ 220

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           ERLHEISD                   F+S+  ++++A    LKN               
Sbjct: 221 ERLHEISD-------------------FLSSLEKQVQASQLKLKND-------------- 280

Query: 181 RFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDV------KCMNFSQSA 240
            F++ +   +  +   L     K  +       +    R + +DV      +C    QSA
Sbjct: 281 -FISTFTKEMKAMISTL-----KKPLQKFPPHSIQSPERTACLDVPKQKRHRCK--IQSA 340

Query: 241 SPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE-QCLVLEREYRVI 300
           SPNVC +ATAVQKEEVG WKSVKVGK FCTSSVV +DDP KVIPFSE QCLVLEREYRVI
Sbjct: 341 SPNVCTQATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVI 374

Query: 301 VDSDEEIERSFSCLIEEKKTG 315
           VDSDEEIERSFSCLIEEKKTG
Sbjct: 401 VDSDEEIERSFSCLIEEKKTG 374

BLAST of Cla021235 vs. NCBI nr
Match: gi|659075251|ref|XP_008438045.1| (PREDICTED: protein PAIR1 isoform X1 [Cucumis melo])

HSP 1 Score: 333.2 bits (853), Expect = 5.0e-88
Identity = 196/322 (60.87%), Postives = 221/322 (68.63%), Query Frame = 1

Query: 1   MALSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNK 60
           + LSKSSTSLTQ+W+ +PL DSKCQVGEELDRRLGTIENSLNKFGKILDSL SDILQLNK
Sbjct: 101 LGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNK 160

Query: 61  GMKQVSLDVEGIWQKMLVNSSSLQSMRKVQCQNKEHDDMKATLDGGFKLISDLLKKDAHQ 120
           GMKQVSLDVE IWQKMLVNSS LQSM      NK+HDDMKA +DGGFKLISD LKKDA+Q
Sbjct: 161 GMKQVSLDVESIWQKMLVNSSLLQSM------NKDHDDMKAIIDGGFKLISDQLKKDAYQ 220

Query: 121 ERLHEISDVLSSLEKQVQASQLKLKNDFISTFTQEMKAIVCTLKNPLQKFPPRSIQSPEV 180
           ERLHEISD                   F+S+  ++++A    LKN               
Sbjct: 221 ERLHEISD-------------------FLSSLEKQVQASQLKLKND-------------- 280

Query: 181 RFLTKYRSNVLGVCFILNCVSWKDLIANVRVLPVWMFHRKSDIDV------KCMNFSQSA 240
            F++ +   +  +   L     K  +       +    R + +DV      +C    QSA
Sbjct: 281 -FISTFTKEMKAMISTL-----KKPLQKFPPHSIQSPERTACLDVPKQKRHRCK--IQSA 340

Query: 241 SPNVCIRATAVQKEEVGRWKSVKVGKTFCTSSVVKKDDPKKVIPFSE--QCLVLEREYRV 300
           SPNVC +ATAVQKEEVG WKSVKVGK FCTSSVV +DDP KVIPFSE  QCLVLEREYRV
Sbjct: 341 SPNVCTQATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQQQCLVLEREYRV 375

Query: 301 IVDSDEEIERSFSCLIEEKKTG 315
           IVDSDEEIERSFSCLIEEKKTG
Sbjct: 401 IVDSDEEIERSFSCLIEEKKTG 375

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PAIR1_ORYSJ1.8e-1329.95Protein PAIR1 OS=Oryza sativa subsp. japonica GN=PAIR1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L487_CUCSA4.6e-8860.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122370 PE=4 SV=1[more]
A9P914_POPTR8.1e-4535.67Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s16140g PE=2 SV=1[more]
W9S0R0_9ROSA4.0e-4437.03Uncharacterized protein OS=Morus notabilis GN=L484_017269 PE=4 SV=1[more]
A0A067JXJ9_JATCU1.1e-3848.33Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14393 PE=4 SV=1[more]
A0A067JXJ9_JATCU9.3e-3332.49Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14393 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659075258|ref|XP_008438048.1|1.6e-8961.25PREDICTED: protein PAIR1 isoform X3 [Cucumis melo][more]
gi|778677212|ref|XP_011650752.1|1.3e-8860.12PREDICTED: protein PAIR1 isoform X2 [Cucumis sativus][more]
gi|778677209|ref|XP_004134325.2|1.7e-8859.94PREDICTED: protein PAIR1 isoform X1 [Cucumis sativus][more]
gi|659075256|ref|XP_008438047.1|3.8e-8861.06PREDICTED: protein PAIR1 isoform X2 [Cucumis melo][more]
gi|659075251|ref|XP_008438045.1|5.0e-8860.87PREDICTED: protein PAIR1 isoform X1 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044699 single-organism process
biological_process GO:0048856 anatomical structure development
biological_process GO:0048229 gametophyte development
biological_process GO:0007127 meiosis I
biological_process GO:0090304 nucleic acid metabolic process
biological_process GO:0044710 single-organism metabolic process
biological_process GO:1903046 meiotic cell cycle process
biological_process GO:0070192 chromosome organization involved in meiotic cell cycle
biological_process GO:0048236 plant-type spore development
biological_process GO:0009553 embryo sac development
biological_process GO:0042138 meiotic DNA double-strand break formation
biological_process GO:0009556 microsporogenesis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021235Cla021235.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 116..136
scor
NoneNo IPR availablePANTHERPTHR37695FAMILY NOT NAMEDcoord: 1..315
score: 5.5
NoneNo IPR availablePANTHERPTHR37695:SF1RECOMBINATION INITIATION DEFECTS 3-RELATEDcoord: 1..315
score: 5.5

The following gene(s) are paralogous to this gene:

None