Carg20998 (gene) Silver-seed gourd

Overview
NameCarg20998
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein PAIR1 isoform X3
LocationCucurbita_argyrosperma_scaffold_170 : 256607 .. 261096 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTTAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCACAACAATCCTTTTCCCTGGGTCTGTCATCTGAGCACAGCATGTATTCTCAGCTTTCTCAGAACTCGTTTGACGAAGTCGTGACAAATGAACAGGTCAATCTCGGCTCTTCTCTGGATTTCCAGGTTTTAGGACTTTGTTTGTGCATTAAGAAATGAAAGAAATGACAATAAAGTACTACACTGATAGTCGATGTGTTTATGCACTCGATTAAATAATTAGCATTACGGAATTCGTTTTGTCTTGACAATATTGAAAGACTGCTTAGAATTTTTATGTTTTATCGTATGCTTGTGATTATATTTGTTTGCACCTCTCTGCAAATAAAAGTCGGTCGAGTTTTTTTACTCAGATTCCCGGAGTTGGTTGAGATTTGTGTGGATGAAATTAAATTCACCTCCTTCTATTATTAGCTTCAACAACTCATTCAAACTCTATTATTAGCTTCAACATGGAAATCAACTCCTCTTCCAGACTCTAAATGTAAGTTCACTCCCTTGGATTCATATGATGGACTCAAACTATTGCAATTAGCTTGTTTGATTTCATTACAGCATGGTATAACTGTTTGAGTAGGCAGGTTGATCAACTGTCATTTCTTACGACCTCTATACATTTATTGCGACTTAATTTAATAGTTTCAGCTTTTCTTTTTAGGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGTACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCATAGTGATATTCTGCAATTGAACAAAGGAATGAAGCAAATTTCTCTCGATGGTGAGCTTTGCAACCCCTCAAGCTGAAAAGTAAAATTTGAAGAGAAACTATGTATTACTTTTGAAAAACACTTTTTGCACTGATTCCTGTTGTGCTTGTTACTCAAGTAGGAATAAGGTGATGCAAAGGCTTTACTTGAATTTCAATTCCTTCATAAAGTAGGATTAAGATTGCTATGTTATGAATGTGAAAAGAGAAAGTGCCCAAATCAGTAAGTATTCCTGACCTACAATTTAAAGCTTAAGGACTAAAAGTTTATTCAAATAATATGCTTATTGATTTTTCAAACTGCAGTTGAAGGCATATGGCAAAAGATGATTGTTAGCAGTAGCTTGCTGCAATCCATGGTAAAATTGTACTAGATCAATGCAATATTTTATTGACCATTAAGTTCGTTTCAATTTAATCATAATGTCTAAATTGTTCATTCAACTAATGATTGCAAAGTTCAACGTCAGAACAAAGAACATGATGACATGAAAGCTACTCTTGATGGAGGCTTCAAATTAATATCCGATCAACTTAAGAACGATGCATACCAAGAAAGGCTACATGAGATATTCGATGTTCTTTCTGCATTGGAAAAGCAAGTACAAGCATCTCACCTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAACGTAAGTGCATGTTGTAACAAATATTGCTATAAATGTACGATAAAAAGCATTTGCCTCCTAACTCTATTCCGACAAGATGGGTTGTTCAGATTTATATATATATATATATATATCTTCACAAAAGTACCCTGCCCAAATTTTTGCTTTGAGATTGTTTTAATATCTCAAGTAAATGCCACTTAGCAGTCATGTATTCTTCATGTAACTTGTAGGCAATGGTCTGTACCTTAAAGAAACCCTTGAAGAAATTTCCACCTCACTCTATTCAATCTCCTGAGGTTCGGTTTCTTACTAAATATTGGTAAAATATTTTAAGCATTTGTTTCATCCTGAACTAATTTTAAATGTCAGAGTACCACTTGTTTGGATGCTCCACAGCAAAAGCGACTTCCATGTAAAATGTATGAATCTCAGTTTTCACAATAACTGGTTTGATTCCTAGTTTTTTTTTCATGTATTTCACATTCAGAAAGTCATCATATCTTAAATGAATGAATTACTGATCATGGTGAATGTGTTTAGATTGAATTGATTTATACCAATCTGGGAGTTCAACTTTCCTTCTAATGCACAAAATGTAGAATTTCATGACATTTAGTGACATACAAAAGCTCAACGGTTTCTTCCCTTCCTGTATATTTTATGGCTCTGATATACAGCAGTCTGGAAGTTCTCAAGGGAATTTTGGAATTATATTCCATTACATTCTATCATATTGCATGTGGAGTATATGCGTGGAGAAAAGAAGTTTCCGTTTATCAGTAATGTTATCTTATGACATGAAAATCATACTCTTGAGCACCCACAATGTTCTGGTGATTGTTTATGCACTATGGAATTATACGCATTGGTCCTTTGTTCTTTAGCATCTTAAGAGAGCTTACTTTTCCCACTTACTGTCAGCCAACCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAGCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGAAAAGGCCTTTTGCACTAGTAGCGTGGTGAAAAAGGAAGATCCAAAGAAAGTAATTCCATTTTCTGAACAGGTAGCAATTTGAATTTCATTATTTCTTCTGCCATCTCATTACCATTTATTGCGGAAATTGTGTAATTGTATTTTTGAAAGCCAATATTAAGCTATTCCCTGATTATTGAATCCAAACTTTACACGTTATTCTATGAAGCTAGTAAAGATTTCACCTTGAATACTAGCAGTGCCTGGTGCTGGAAAGGGAATATAGAGTTATTGTCGATTCCGATGAGGAGATCGAAAGAAGCTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGAAAATAAAGAACGACACTTCTAGATGGTATAAATAGTGTAAATTTAAATATTGTCAATCACATCTTCTTCACATGCATATAGAGTAGCATGCAACTGATATGAGACGTGGACATGACGGAACAAAGAAATAATGGCATGTAACTATTTAGAAAAAAATTTAAGACATGGTCCTGCTGTGATACATAAAATATCGATACTTTATATTTTATATAAATCTATTCATTTCATGTGCTCAGAAGATTTTCATTCAAAGGACAAGATCCCGATTTTGGGTAGAGTAGGTATATAAGATTCGAGTCTAGCACAGATTGGTCTAATAACATAAAATAGCCTCATTTTTTAGAATTCAATAAAACTGACCCAAAGTGCTCAGCAGCGTCTGGCTGCTAAAAAAAAGGAGAAGATTGGCCATTTGTTGAGGCAGTAAGACGTGGTTAAGATGTATCTGAGTTTTTTAGATATGTTGGACTCGAATTCAAGGCGTGTCTGTTTGCCCTAGATATTGGACAGATTTGGAGGAGCATTCATGCTTCATAAGAGATAGTGAAATGAAAACTTATTTTAGCGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGAGCCATTCTAAAAGAATATGAAAACATGCTGTCCAATAATAATATGAGGAAAAAAATATGGAACACTATGGAATTTTATTTTCAATAGTATGGTTCACTGGGACAATTCCGTGCTTTATTTGGCTTGCAGATCAGTCAGAGTCAATATTTCTCTATGCTAGATTGTGAAATGAATATTAGTATTTTGTCTGATATTATTTATATTAACATGACAAATACTAGGAGAAGATGTACGTTACTATTCCATTGAAGACGCCAAGGAAGAAACTGAAAGAATTTTAAGGAAAGCAAGAAGGCAGAAAAGAAAATATGGCAATCCTATAATTATTAATTGAAGGTACATTTCTGCTCATTAAATATCAATGCTTATATGTTCAGAAAGAATGATTCAAGATGTTAAAAATGAGACTTGCATTGGTAGGATTTCCTGGAATCTTTACACCACATTCTATTGATGGAGGAAACTTTCGTTCTTCCTATTTTTCTATTTGTATCATGGAGATGTCAATAGATAATACATTTGTAGCTTGCAAGATTAATTTTTGGTGCACCACTTGAAATTTTGTCTTGTAGTCGTCTATCTCTTATGTATGGAACTATTCTCTGGTACTTTAAATTGCATCTATCCAGACCGTAGTCTGCCCTTACAAAAGAGATCGACCTTTGAGAAGTGCATTTCAGCCTACTCAAAATTTTATGCACTTTTTGTCTGGATGAAAAAAATTAGATTATTATAACTGTTGCCTGAAGAAGAAGACTGCCGGTGTAGGAACCAAGGCCTTTTAGACGTGAGAAAGAAAAGAGCTAGTATCCTATCCTTGTTGCATTCTTACCTCAGTCTTTTCCTAACGCCTGTAAGTCCAAGGAAGAAAATATGATCTCAAAATTTGAAGTCCAGATATCGTACTTCAGTACAGACTTATGAACCGATCAGCTTTAATAGGACATGGCCTTCTTGTTGTCCTTGAATAATAACTATTTACAATTTGTTACATTCGAAAACCACTCTGCCAAGATGGCAGGAAAAAGATAGTATTAGTCTTAATTTTTCAATGC

mRNA sequence

AGGTTAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCACAACAATCCTTTTCCCTGGGTCTGTCATCTGAGCACAGCATGTATTCTCAGCTTTCTCAGAACTCGTTTGACGAAGTCGTGACAAATGAACAGGTCAATCTCGGCTCTTCTCTGGATTTCCAGCTTCAACAACTCATTCAAACTCTATTATTAGCTTCAACATGGAAATCAACTCCTCTTCCAGACTCTAAATGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGTACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCATAGTGATATTCTGCAATTGAACAAAGGAATGAAGCAAATTTCTCTCGATGTTGAAGGCATATGGCAAAAGATGATTGTTAGCAGTAGCTTGCTGCAATCCATGAACAAAGAACATGATGACATGAAAGCTACTCTTGATGGAGGCTTCAAATTAATATCCGATCAACTTAAGAACGATGCATACCAAGAAAGGCTACATGAGATATTCGATGTTCTTTCTGCATTGGAAAAGCAAGTACAAGCATCTCACCTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAACGCAATGGTCTGTACCTTAAAGAAACCCTTGAAGAAATTTCCACCTCACTCTATTCAATCTCCTGAGGTTCGGTTTCTTACTAAATATTGCCAACCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAGCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGAAAAGGCCTTTTGCACTAGTAGCGTGGTGAAAAAGGAAGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCCTGGTGCTGGAAAGGGAATATAGAGTTATTGTCGATTCCGATGAGGAGATCGAAAGAAGCTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGAAAATAAAGAACGACACTTCTAGATGGAGAAGATGTACGTTACTATTCCATTGAAGACGCCAAGGAAGAAACTGAAAGAATTTTAAGGAAAGCAAGAAGGCAGAAAAGAAAATATGGCAATCCTATAATTATTAATTGAAGGTACATTTCTGCTCATTAAATATCAATGCTTATATGTTCAGAAAGAATGATTCAAGATGTTAAAAATGAGACTTGCATTGGTAGGATTTCCTGGAATCTTTACACCACATTCTATTGATGGAGGAAACTTTCGTTCTTCCTATTTTTCTATTTGTATCATGGAGATGTCAATAGATAATACATTTGTAGCTTGCAAGATTAATTTTTGGTGCACCACTTGAAATTTTGTCTTGTAGTCGTCTATCTCTTATGTATGGAACTATTCTCTGGTACTTTAAATTGCATCTATCCAGACCGTAGTCTGCCCTTACAAAAGAGATCGACCTTTGAGAAGTGCATTTCAGCCTACTCAAAATTTTATGCACTTTTTGTCTGGATGAAAAAAATTAGATTATTATAACTGTTGCCTGAAGAAGAAGACTGCCGGTGTAGGAACCAAGGCCTTTTAGACGTGAGAAAGAAAAGAGCTAGTATCCTATCCTTGTTGCATTCTTACCTCAGTCTTTTCCTAACGCCTGTAAGTCCAAGGAAGAAAATATGATCTCAAAATTTGAAGTCCAGATATCGTACTTCAGTACAGACTTATGAACCGATCAGCTTTAATAGGACATGGCCTTCTTGTTGTCCTTGAATAATAACTATTTACAATTTGTTACATTCGAAAACCACTCTGCCAAGATGGCAGGAAAAAGATAGTATTAGTCTTAATTTTTCAATGC

Coding sequence (CDS)

AGGTTAAATGCGTTAACCACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCACAACAATCCTTTTCCCTGGGTCTGTCATCTGAGCACAGCATGTATTCTCAGCTTTCTCAGAACTCGTTTGACGAAGTCGTGACAAATGAACAGGTCAATCTCGGCTCTTCTCTGGATTTCCAGCTTCAACAACTCATTCAAACTCTATTATTAGCTTCAACATGGAAATCAACTCCTCTTCCAGACTCTAAATGTCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGTACTATAGAAAACTCATTAAACAAGTTTGGAAAGATCTTGGATTCTCTTCATAGTGATATTCTGCAATTGAACAAAGGAATGAAGCAAATTTCTCTCGATGTTGAAGGCATATGGCAAAAGATGATTGTTAGCAGTAGCTTGCTGCAATCCATGAACAAAGAACATGATGACATGAAAGCTACTCTTGATGGAGGCTTCAAATTAATATCCGATCAACTTAAGAACGATGCATACCAAGAAAGGCTACATGAGATATTCGATGTTCTTTCTGCATTGGAAAAGCAAGTACAAGCATCTCACCTGAAATTAAAAAATGACTTCATCAGCACATTCACCCAAGAAATGAACGCAATGGTCTGTACCTTAAAGAAACCCTTGAAGAAATTTCCACCTCACTCTATTCAATCTCCTGAGGTTCGGTTTCTTACTAAATATTGCCAACCTGCGTCTCCAAATGTTTGCATTCGAGCAACTGCAGTACAAAGCGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGAAAAGGCCTTTTGCACTAGTAGCGTGGTGAAAAAGGAAGATCCAAAGAAAGTAATTCCATTTTCTGAACAGTGCCTGGTGCTGGAAAGGGAATATAGAGTTATTGTCGATTCCGATGAGGAGATCGAAAGAAGCTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGA

Protein sequence

RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPPHSIQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS
Homology
[Close]
BLAST of Carg20998 vs. NCBI nr
Match: XP_023526420.1 (protein PAIR1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 494.6 bits (1272), Expect = 2.6e-136
Identity = 270/349 (77.36%), Postives = 278/349 (79.66%), Query Frame = 0 

Query: 1   RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMY-----------------SQLSQNSFD 60
           R NALTTGQQAPQLRSQPSQQSFSLGLSSEH MY                          
Sbjct: 23  RSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYXXXXXXXXXXXXXXXXXXXXXXXXXX 82

Query: 61  EVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENSLNK 120
                                  +  L   WKSTPLPDSKCQVGEELDRRLGTIENSLNK
Sbjct: 83  XXXXXXXXXXXXXXXXXXXXXXSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNK 142

Query: 121 FGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKL 180
           FGKILDSLHSDILQLNKGMKQISLDVEGIWQKMI+SSSLLQSMNKEHDDMKATLDGGFKL
Sbjct: 143 FGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIISSSLLQSMNKEHDDMKATLDGGFKL 202

Query: 181 ISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKK 240
           ISDQLKNDAYQER+HEI DVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKK
Sbjct: 203 ISDQLKNDAYQERVHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKK 262

Query: 241 FPPHS-------IQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS 300
           FPPHS       + +P+ + L    QPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS
Sbjct: 263 FPPHSTPESTTCLDAPQQKRLRCKIQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS 322

Query: 301 VVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 326
           VVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 323 VVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 371

[Close]
BLAST of Carg20998 vs. NCBI nr
Match: XP_023526419.1 (protein PAIR1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.0 bits (1260), Expect = 6.4e-135
Identity = 270/350 (77.14%), Postives = 278/350 (79.43%), Query Frame = 0 

Query: 1   RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMY-----------------SQLSQNSFD 60
           R NALTTGQQAPQLRSQPSQQSFSLGLSSEH MY                          
Sbjct: 23  RSNALTTGQQAPQLRSQPSQQSFSLGLSSEHGMYXXXXXXXXXXXXXXXXXXXXXXXXXX 82

Query: 61  EVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENSLNK 120
                                  +  L   WKSTPLPDSKCQVGEELDRRLGTIENSLNK
Sbjct: 83  XXXXXXXXXXXXXXXXXXXXXXSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNK 142

Query: 121 FGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKL 180
           FGKILDSLHSDILQLNKGMKQISLDVEGIWQKMI+SSSLLQSMNKEHDDMKATLDGGFKL
Sbjct: 143 FGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIISSSLLQSMNKEHDDMKATLDGGFKL 202

Query: 181 ISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKK 240
           ISDQLKNDAYQER+HEI DVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKK
Sbjct: 203 ISDQLKNDAYQERVHEISDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKK 262

Query: 241 FPPHS-------IQSPEVRFLTKYCQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS 300
           FPPHS       + +P+ + L    QPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS
Sbjct: 263 FPPHSTPESTTCLDAPQQKRLRCKIQPASPNVCIRATAVQSEEVGRWKSVKVEKAFCTSS 322

Query: 301 VVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 326
           VVKKEDPKKVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 323 VVKKEDPKKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGE 372

[Close]
BLAST of Carg20998 vs. NCBI nr
Match: XP_023539314.1 (protein PAIR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.9 bits (1221), Expect = 2.1e-130
Identity = 265/352 (75.28%), Postives = 282/352 (80.11%), Query Frame = 0 

Query: 1   RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------ 60
           R NALTTGQQAPQLRSQPSQQSFS GLSS H   SQ SQNSFDEVVTNEQ          
Sbjct: 22  RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENS 81

Query: 61  ------------SSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENSLN 120
                       S  + QL     +  L   WKSTPLPDSKCQ+GEELDRRLGTIENSLN
Sbjct: 82  IKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPDSKCQLGEELDRRLGTIENSLN 141

Query: 121 KFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFK 180
           KFGKILDSLH DIL LN+GMKQISLDVEGIWQK+IV+SSLLQSMNKEHDDMKATLDGGFK
Sbjct: 142 KFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKATLDGGFK 201

Query: 181 LISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLK 240
           LISDQLK DAYQERLHEI DVLSALEKQVQAS LKL+NDFISTFTQEM AMVCTLKKPL+
Sbjct: 202 LISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQ 261

Query: 241 KFPPHSIQSPE-------VRFLTKYC--QPASPNVCIRATAVQSEEVGRWKSVKVEKAFC 300
           KFP   I+SPE        +   + C  Q ASP+VCIRATAVQ+EEVGRWKSVKV KAFC
Sbjct: 262 KFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRATAVQTEEVGRWKSVKVGKAFC 321

Query: 301 TSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 326
           TS+V+KKED KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 322 TSTVMKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGE 373

[Close]
BLAST of Carg20998 vs. NCBI nr
Match: XP_022943732.1 (protein PAIR1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 473.0 bits (1216), Expect = 8.1e-130
Identity = 264/352 (75.00%), Postives = 280/352 (79.55%), Query Frame = 0 

Query: 1   RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------ 60
           R NALTTGQQAPQLRSQPSQQSFS GLSS H   SQ SQNSFDEVVTNEQ          
Sbjct: 22  RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENS 81

Query: 61  ------------SSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENSLN 120
                       S  + QL     +  L   WKSTPLPDSKCQVGEELDRRLGTIENSLN
Sbjct: 82  IKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLN 141

Query: 121 KFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFK 180
           KFGKILDSLH DIL LN+GMKQISLDVEGIWQK+IV+SSLLQSMNKEHDDMK+TLDGGFK
Sbjct: 142 KFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFK 201

Query: 181 LISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLK 240
           LISDQLK DAYQERLHEI DVLSALEKQVQAS LKL+NDFISTFTQEM AMVCTLKKPL+
Sbjct: 202 LISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQ 261

Query: 241 KFPPHSIQSPE-------VRFLTKYC--QPASPNVCIRATAVQSEEVGRWKSVKVEKAFC 300
           KFP   I+SPE        +   + C  Q ASP+VCIRATAVQ+EEVGRWKSVKV K FC
Sbjct: 262 KFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRATAVQTEEVGRWKSVKVGKTFC 321

Query: 301 TSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 326
           TS+V KKED KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 322 TSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGE 373

[Close]
BLAST of Carg20998 vs. NCBI nr
Match: XP_022943725.1 (protein PAIR1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 473.0 bits (1216), Expect = 8.1e-130
Identity = 264/352 (75.00%), Postives = 280/352 (79.55%), Query Frame = 0 

Query: 1   RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLG------ 60
           R NALTTGQQAPQLRSQPSQQSFS GLSS H   SQ SQNSFDEVVTNEQ          
Sbjct: 23  RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFSQNSFDEVVTNEQRFSSQDRENS 82

Query: 61  ------------SSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGTIENSLN 120
                       S  + QL     +  L   WKSTPLPDSKCQVGEELDRRLGTIENSLN
Sbjct: 83  IKKNSFFPPLSYSREECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLN 142

Query: 121 KFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFK 180
           KFGKILDSLH DIL LN+GMKQISLDVEGIWQK+IV+SSLLQSMNKEHDDMK+TLDGGFK
Sbjct: 143 KFGKILDSLHGDILHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFK 202

Query: 181 LISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLK 240
           LISDQLK DAYQERLHEI DVLSALEKQVQAS LKL+NDFISTFTQEM AMVCTLKKPL+
Sbjct: 203 LISDQLKKDAYQERLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQ 262

Query: 241 KFPPHSIQSPE-------VRFLTKYC--QPASPNVCIRATAVQSEEVGRWKSVKVEKAFC 300
           KFP   I+SPE        +   + C  Q ASP+VCIRATAVQ+EEVGRWKSVKV K FC
Sbjct: 263 KFPHRPIESPESTASLDVPQQKRRRCKIQSASPDVCIRATAVQTEEVGRWKSVKVGKTFC 322

Query: 301 TSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGD 326
           TS+V KKED KK IPFSEQ LV+EREYRVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 323 TSTVAKKEDAKKAIPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTGE 374

[Close]
BLAST of Carg20998 vs. TAIR10
Match: AT1G01690.1 (putative recombination initiation defects 3)

HSP 1 Score: 147.1 bits (370), Expect = 1.9e-35
Identity = 126/397 (31.74%), Postives = 190/397 (47.86%), Query Frame = 0 

Query: 9   QQAPQLRSQPSQQSFSLGLSSEH---SMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLI 68
           Q + QLRSQ SQQSFS G SS       +SQ++Q+S DE++ N+Q       D  L+++ 
Sbjct: 28  QASQQLRSQQSQQSFSQGPSSSQRGCGGFSQMTQSSIDELLINDQRFSSQERDLSLKKVS 87

Query: 69  QTL-----------LLAS--------TWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGK 128
             L           L+AS         W S  + +SK Q+ EEL++R G +E SL++FG 
Sbjct: 88  SCLPPINHKREDSQLVASRSSSGLSRRWSSASIGESKSQISEELEQRFGMMETSLSRFGM 147

Query: 129 ILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISD 188
           +LDS+ SDI+Q N+G K++ L+ E I QK+ +  + LQ + KE  D KA+LDGG K I +
Sbjct: 148 MLDSIQSDIMQANRGTKEVFLETERIQQKLTLQDTSLQQLRKEQADSKASLDGGVKFILE 207

Query: 189 QLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKP------ 248
           +   D  QE+L +I  +L+ + +QV+ +  K++ +   TFT+E+  ++ +L+ P      
Sbjct: 208 EFSKDPNQEKLQKILQMLTTIPEQVETALQKIQREICHTFTREIQ-VLASLRTPEPRVRV 267

Query: 249 --------LKKFPPHSIQS--------------------------PEVR----------- 308
                    +  P    Q+                          PE R           
Sbjct: 268 PTAPQVKAKENLPEQRGQAXXXXXXXXXXXXXXXXXXXXXXXXXFPEQRGPVAKSNSFCN 327

Query: 309 --FLTKYCQ-PASPN----VCIRATAVQSEEVGRWKSVKVEKAFCTSSVVKKEDPKKVIP 325
               TK  Q P +PN      ++       +VG WK+VK EK     S  KK   +K + 
Sbjct: 328 TTLKTKQPQFPRNPNDASARAVKPYLSPKIQVGCWKTVKPEK-----SNFKKRATRKPVK 387

[Close]
BLAST of Carg20998 vs. Swiss-Prot
Match: sp|Q75RY2|PAIR1_ORYSJ (Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 0 

Query: 88  EELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMN 147
           E+++R+   + +S++K G ++DS+ SD++QLN+ MK+ SLD   I QK+ V  S LQ + 
Sbjct: 146 EDVERKFQHLASSVHKMGMVVDSVQSDVMQLNRAMKEASLDSGSIRQKIAVLESSLQQIL 205

Query: 148 KEHDDMKATLDGGFKLISDQLK-NDAYQERLHEIFDVLSALEKQVQASHL 197
           K  DD+KA      K   DQ    ++   +L+EI   L+ L+ Q+QA  L
Sbjct: 206 KGQDDLKALFGSSTKHNPDQTSVLNSLGSKLNEISSTLATLQTQMQARQL 255

[Close]
BLAST of Carg20998 vs. TrEMBL
Match: tr|A0A1S3AVJ5|A0A1S3AVJ5_CUCME (protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.1e-109
Identity = 233/358 (65.08%), Postives = 252/358 (70.39%), Query Frame = 0 

Query: 1   RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMY------------------------SQ 60
           RLNALTTGQQAPQLRSQPSQQSFS GLSS+H MY                          
Sbjct: 23  RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYXXXXXXXXXXXXXXXXXXXXXXXXXS 82

Query: 61  LSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGT 120
           + +NSF   ++       S  D QL     +  L   W+ +PL DSKCQVGEELDRRLGT
Sbjct: 83  IKKNSFFPPLSY------SKEDCQLGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGT 142

Query: 121 IENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKAT 180
           IENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA 
Sbjct: 143 IENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAI 202

Query: 181 LDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCT 240
           +DGGFKLISDQLK DAYQERLHEI D LS+LEKQV                      + T
Sbjct: 203 IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVXXXXXXXXXXXXXXXXXXXXXXIST 262

Query: 241 LKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSV 300
           LKKPL+KFPPHSIQSPE           R   K  Q ASPNVC +ATAVQ EEVG WKSV
Sbjct: 263 LKKPLQKFPPHSIQSPERTACLDVPKQKRHRCK-IQSASPNVCTQATAVQKEEVGMWKSV 322

Query: 301 KVEKAFCTSSVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 325
           KV KAFCTSSVV ++DP KVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 323 KVGKAFCTSSVVTRDDPNKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 373

[Close]
BLAST of Carg20998 vs. TrEMBL
Match: tr|A0A1S3AV35|A0A1S3AV35_CUCME (protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 7.6e-108
Identity = 233/359 (64.90%), Postives = 252/359 (70.19%), Query Frame = 0 

Query: 1   RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMY------------------------SQ 60
           RLNALTTGQQAPQLRSQPSQQSFS GLSS+H MY                          
Sbjct: 23  RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYXXXXXXXXXXXXXXXXXXXXXXXXXS 82

Query: 61  LSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGT 120
           + +NSF   ++       S  D QL     +  L   W+ +PL DSKCQVGEELDRRLGT
Sbjct: 83  IKKNSFFPPLSY------SKEDCQLGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGT 142

Query: 121 IENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKAT 180
           IENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA 
Sbjct: 143 IENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAI 202

Query: 181 LDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCT 240
           +DGGFKLISDQLK DAYQERLHEI D LS+LEKQV                      + T
Sbjct: 203 IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVXXXXXXXXXXXXXXXXXXXXXXIST 262

Query: 241 LKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSV 300
           LKKPL+KFPPHSIQSPE           R   K  Q ASPNVC +ATAVQ EEVG WKSV
Sbjct: 263 LKKPLQKFPPHSIQSPERTACLDVPKQKRHRCK-IQSASPNVCTQATAVQKEEVGMWKSV 322

Query: 301 KVEKAFCTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 325
           KV KAFCTSSVV ++DP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 323 KVGKAFCTSSVVTRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 374

[Close]
BLAST of Carg20998 vs. TrEMBL
Match: tr|A0A1S4DSK1|A0A1S4DSK1_CUCME (protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 9.9e-108
Identity = 233/360 (64.72%), Postives = 252/360 (70.00%), Query Frame = 0 

Query: 1   RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMY------------------------SQ 60
           RLNALTTGQQAPQLRSQPSQQSFS GLSS+H MY                          
Sbjct: 23  RLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYXXXXXXXXXXXXXXXXXXXXXXXXXS 82

Query: 61  LSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGT 120
           + +NSF   ++       S  D QL     +  L   W+ +PL DSKCQVGEELDRRLGT
Sbjct: 83  IKKNSFFPPLSY------SKEDCQLGLSKSSTSLTQKWRPSPLTDSKCQVGEELDRRLGT 142

Query: 121 IENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKAT 180
           IENSLNKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+V+SSLLQSMNK+HDDMKA 
Sbjct: 143 IENSLNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLVNSSLLQSMNKDHDDMKAI 202

Query: 181 LDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCT 240
           +DGGFKLISDQLK DAYQERLHEI D LS+LEKQV                      + T
Sbjct: 203 IDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQVXXXXXXXXXXXXXXXXXXXXXXIST 262

Query: 241 LKKPLKKFPPHSIQSPE----------VRFLTKYCQPASPNVCIRATAVQSEEVGRWKSV 300
           LKKPL+KFPPHSIQSPE           R   K  Q ASPNVC +ATAVQ EEVG WKSV
Sbjct: 263 LKKPLQKFPPHSIQSPERTACLDVPKQKRHRCK-IQSASPNVCTQATAVQKEEVGMWKSV 322

Query: 301 KVEKAFCTSSVVKKEDPKKVIPFSE--QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 325
           KV KAFCTSSVV ++DP KVIPFSE  QCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 323 KVGKAFCTSSVVTRDDPNKVIPFSEQQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTG 375

[Close]
BLAST of Carg20998 vs. TrEMBL
Match: tr|A0A0A0L487|A0A0A0L487_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122370 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 6.4e-99
Identity = 218/357 (61.06%), Postives = 240/357 (67.23%), Query Frame = 0 

Query: 1   RLNALTTGQQAPQLRSQPSQQSFSLGLSSEHSMY------------------------SQ 60
           RLNALTTGQQA QLRSQPSQQSFS GLSS+H MY                          
Sbjct: 18  RLNALTTGQQASQLRSQPSQQSFSQGLSSQHGMYXXXXXXXXXXXXXXXXXXXXXXXXXX 77

Query: 61  LSQNSFDEVVTNEQVNLGSSLDFQLQQLIQTLLLASTWKSTPLPDSKCQVGEELDRRLGT 120
           + +NSF   V+       S  D QL     +  L   W+ +PLPDSKCQVGEELDRRLGT
Sbjct: 78  IKKNSFFPPVSY------SKEDSQLGISKSSTSLTQKWRPSPLPDSKCQVGEELDRRLGT 137

Query: 121 IENSLNKFGKILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKAT 180
           IENS+NKFGKILDSL SDILQLNKGMKQ+SLDVE IWQKM+++SS LQSMNK+HDDMKA 
Sbjct: 138 IENSVNKFGKILDSLLSDILQLNKGMKQVSLDVESIWQKMLINSSSLQSMNKDHDDMKAI 197

Query: 181 LDGGFKLISDQLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCT 240
           +DGGFKLISDQLK DAYQERLHEI D LS+                              
Sbjct: 198 IDGGFKLISDQLKKDAYQERLHEISDFLSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 257

Query: 241 LKKPLKKFPPHSIQSPE-------VRFLTKYC--QPASPNVCIRATAVQSEEVGRWKSVK 300
               L+KFPPHSIQSPE        +   + C  Q A+PNVC +AT VQ EEVG WKSVK
Sbjct: 258 XXXXLQKFPPHSIQSPESNACLDVPKQKQRRCKIQSAAPNVCTQATGVQKEEVGMWKSVK 317

Query: 301 VEKAFCTSSVVKKEDPKKVIPFSE-QCLVLEREYRVIVDSDEEIERSFSCLIEEKKT 324
           V KAFCTSSVVK++DP KVIPFSE QCLVLEREYRVIVDSDEEIERSFSCLIEEKKT
Sbjct: 318 VGKAFCTSSVVKRDDPNKVIPFSEQQCLVLEREYRVIVDSDEEIERSFSCLIEEKKT 368

[Close]
BLAST of Carg20998 vs. TrEMBL
Match: tr|A0A2P5F2R8|A0A2P5F2R8_9ROSA (Protein PAIR OS=Trema orientalis OX=63057 GN=TorRG33x02_121600 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-61
Identity = 153/351 (43.59%), Postives = 209/351 (59.54%), Query Frame = 0 

Query: 8   GQQAPQLRSQPSQQSFSLGLSSEHSMYSQLSQNSFDEVVTNEQVNLGSSLDFQLQQLIQT 67
           G Q  QLRSQPSQQSFS G+SS+H M+SQ+SQNS ++V+TN+Q   GS    +   + +T
Sbjct: 32  GSQMSQLRSQPSQQSFSQGVSSQHGMFSQISQNSLEDVLTNDQ-RFGS--QERENPVKKT 91

Query: 68  LLLAST---------------------WKSTPLPDSKCQVGEELDRRLGTIENSLNKFGK 127
           L L  T                     W S  L D +CQ+ EEL+ R+G +E SLN+FG 
Sbjct: 92  LCLPPTGHTREENQMPVSRSSNNLMRKWTSASLSDHRCQISEELEHRIGIMETSLNRFGM 151

Query: 128 ILDSLHSDILQLNKGMKQISLDVEGIWQKMIVSSSLLQSMNKEHDDMKATLDGGFKLISD 187
           ILDS+  D++Q+NKG K++ L+ EGI QK++V  + LQ MNK  +++KA+LDGGFK ISD
Sbjct: 152 ILDSVQGDVMQVNKGTKEVLLETEGIRQKLVVQDNSLQLMNKGQEEIKASLDGGFKSISD 211

Query: 188 QLKNDAYQERLHEIFDVLSALEKQVQASHLKLKNDFISTFTQEMNAMVCTLKKPLKKFPP 247
           Q+    +Q++L EIF VLS L+++++AS  K +N+F ++FT+EM  M C+L  P +K   
Sbjct: 212 QVNKHIHQDKLQEIFSVLSTLQEKIEASIQKSQNEFRNSFTKEMQQMACSLMVPDQKDQV 271

Query: 248 HSIQSPEVRFLTKYCQ---------PASPNVCIRATAVQSEEVGRWKSVKVEKAFCT--S 307
            SI  P+V       Q          A P    +A  V   E G WKSVK+EKA  T  S
Sbjct: 272 QSILPPKVTRSGAAAQGSPRPIMNSAAPPKFSGQANVVPKTETGGWKSVKLEKATSTYMS 331

Query: 308 SVVKKEDPKKVIPFSEQCLVLEREYRVIVDSDEEIERSFSCLIEEKKTGDS 327
            V K    K + P        ERE RVI+DSDEEI+  FSCL +E ++G S
Sbjct: 332 KVNKAHKQKGISPIQR-----ERECRVIIDSDEEIDGGFSCLFKENESGVS 374

The following BLAST results are available for this feature:
BLAST of Carg20998 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526420.12.6e-13677.36protein PAIR1-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023526419.16.4e-13577.14protein PAIR1-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023539314.12.1e-13075.28protein PAIR1-like [Cucurbita pepo subsp. pepo][more]
XP_022943732.18.1e-13075.00protein PAIR1 isoform X2 [Cucurbita moschata][more]
XP_022943725.18.1e-13075.00protein PAIR1 isoform X1 [Cucurbita moschata][more]
BLAST of Carg20998 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G01690.11.9e-3531.74putative recombination initiation defects 3[more]
BLAST of Carg20998 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q75RY2|PAIR1_ORYSJ1.8e-1137.27Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1[more]
BLAST of Carg20998 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AVJ5|A0A1S3AVJ5_CUCME3.1e-10965.08protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1[more]
tr|A0A1S3AV35|A0A1S3AV35_CUCME7.6e-10864.90protein PAIR1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1[more]
tr|A0A1S4DSK1|A0A1S4DSK1_CUCME9.9e-10864.72protein PAIR1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1[more]
tr|A0A0A0L487|A0A0A0L487_CUCSA6.4e-9961.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122370 PE=4 SV=1[more]
tr|A0A2P5F2R8|A0A2P5F2R8_9ROSA1.4e-6143.59Protein PAIR OS=Trema orientalis OX=63057 GN=TorRG33x02_121600 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0070192chromosome organization involved in meiotic cell cycle
GO:0048236plant-type spore development
Vocabulary: INTERPRO
TermDefinition
IPR034546PAIR1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070192 chromosome organization involved in meiotic cell cycle
biological_process GO:0048236 plant-type spore development
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20998-RACarg20998-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
IPR034546Protein PAIR1PANTHERPTHR37695FAMILY NOT NAMEDcoord: 8..225
coord: 253..325

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg20998Cla021235Watermelon (97103) v1carwmB0487
Carg20998Csa3G122370Cucumber (Chinese Long) v2carcuB0522
Carg20998MELO3C006108Melon (DHL92) v3.5.1carmeB0497
Carg20998ClCG05G001510Watermelon (Charleston Gray)carwcgB0474
Carg20998CSPI03G08760Wild cucumber (PI 183967)carcpiB0529
Carg20998Cucsa.258400Cucumber (Gy14) v1carcgyB0564
Carg20998CmaCh06G010680Cucurbita maxima (Rimu)carcmaB0684
Carg20998CmaCh14G020400Cucurbita maxima (Rimu)carcmaB0683
Carg20998CmoCh06G010930Cucurbita moschata (Rifu)carcmoB0666
Carg20998CmoCh14G021030Cucurbita moschata (Rifu)carcmoB0664
Carg20998Lsi05G020420Bottle gourd (USVL1VR-Ls)carlsiB445
Carg20998Cp4.1LG03g16670Cucurbita pepo (Zucchini)carcpeB0691
Carg20998Cp4.1LG08g01280Cucurbita pepo (Zucchini)carcpeB0692
Carg20998CsGy3G008850Cucumber (Gy14) v2carcgybB0499
Carg20998MELO3C006108.2Melon (DHL92) v3.6.1carmedB0503
Carg20998CsaV3_3G008890Cucumber (Chinese Long) v3carcucB0528
Carg20998Cla97C05G081880Watermelon (97103) v2carwmbB0513
Carg20998Bhi01G000252Wax gourdcarwgoB0594
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg20998Carg24648Silver-seed gourdcarcarB409
The following block(s) are covering this gene:
GeneOrganismBlock
Carg20998Cucurbita moschata (Rifu)carcmoB0665
Carg20998Cucurbita pepo (Zucchini)carcpeB0690
Carg20998Cucurbita pepo (Zucchini)carcpeB0693
Carg20998Melon (DHL92) v3.5.1carmeB0498
Carg20998Watermelon (Charleston Gray)carwcgB0475
Carg20998Watermelon (97103) v1carwmB0488