Cla013039 (gene) Watermelon (97103) v1

NameCla013039
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein (AHRD V1 ***- A8MRW3_ARATH)
LocationChr5 : 10220398 .. 10221257 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGTGGCTGATTCTACCCAGTACATGTGTCCCCGATAGCTGCATTGTAAACATATACGACGAAGGAGATTGCACTCCTCCACATATTCATCACCATGACTTTCTAAGACCCTTTTGCACTGTATCATTTCTAACAGAAAGCAACATCATATTTGCCACTCGACTTGAAATCCCAAGTCCTGGAGAGTTCTGTGGTCCTGTCTCCATTCCTTTGCCTAAAGGGTATGTACACAATTATTGTGCTTTCTAATTTGTTTCTCCATTTCATTTTCTTGGTTGTAAATCTAACGTTTCTGTCTCTATTGATATTACAGTTCTGTATTGATTTTAAGTGGTAATGGAGCTGATCTTGCCAAGCATTGTGTACCTAGTGTCAAAGCTTAAAGGTTGGCTGTCTACTATTGTTATTTTACAATCTTCAAAAGATTACCAAAAGATTCAAAGAAGCTGGTTCCTAATATTTCGAATCTGTGGACATATTGCAGGATCTCGATCACATTCCGAAAAATGGATGACAGGAAACTTCCATACAGGTTTCTGCCTGATCTTGAACTTCAAAGAATCAAGCCGCTGGACTTATCTGAATGGCAAGAGGAAGAGAAGAATGTTGAACTGGAGGAAAGTGAAACTAAACAAAGTGATTATTCACCCAAGCCACTGGAATCATTATCCCAACGGCAAGAGGAGGAAAAGAAGAATGTTCAAGTGAAAAAACAGAGGGGCCATCACAATTATGATTCAGTGAAGGAAGAGATGAATGAAAGGGGACAGAGAGACCATCATCAATATTATTATTCACCCAACCCATCCCCTCAACAAACCAAACGTCAGAGATTCCAAGTTGGTGTCTACTGA

mRNA sequence

ATGGTGAAGTGGCTGATTCTACCCAGTACATGTGTCCCCGATAGCTGCATTGTAAACATATACGACGAAGGAGATTGCACTCCTCCACATATTCATCACCATGACTTTCTAAGACCCTTTTGCACTGTATCATTTCTAACAGAAAGCAACATCATATTTGCCACTCGACTTGAAATCCCAAGTCCTGGAGAGTTCTGTGGTCCTGTCTCCATTCCTTTGCCTAAAGGGATCTCGATCACATTCCGAAAAATGGATGACAGGAAACTTCCATACAGGTTTCTGCCTGATCTTGAACTTCAAAGAATCAAGCCGCTGGACTTATCTGAATGGCAAGAGGAAGAGAAGAATGTTGAACTGGAGGAAAGTGAAACTAAACAAAGTGATTATTCACCCAAGCCACTGGAATCATTATCCCAACGGCAAGAGGAGGAAAAGAAGAATGTTCAAGTGAAAAAACAGAGGGGCCATCACAATTATGATTCAGTGAAGGAAGAGATGAATGAAAGGGGACAGAGAGACCATCATCAATATTATTATTCACCCAACCCATCCCCTCAACAAACCAAACGTCAGAGATTCCAAGTTGGTGTCTACTGA

Coding sequence (CDS)

ATGGTGAAGTGGCTGATTCTACCCAGTACATGTGTCCCCGATAGCTGCATTGTAAACATATACGACGAAGGAGATTGCACTCCTCCACATATTCATCACCATGACTTTCTAAGACCCTTTTGCACTGTATCATTTCTAACAGAAAGCAACATCATATTTGCCACTCGACTTGAAATCCCAAGTCCTGGAGAGTTCTGTGGTCCTGTCTCCATTCCTTTGCCTAAAGGGATCTCGATCACATTCCGAAAAATGGATGACAGGAAACTTCCATACAGGTTTCTGCCTGATCTTGAACTTCAAAGAATCAAGCCGCTGGACTTATCTGAATGGCAAGAGGAAGAGAAGAATGTTGAACTGGAGGAAAGTGAAACTAAACAAAGTGATTATTCACCCAAGCCACTGGAATCATTATCCCAACGGCAAGAGGAGGAAAAGAAGAATGTTCAAGTGAAAAAACAGAGGGGCCATCACAATTATGATTCAGTGAAGGAAGAGATGAATGAAAGGGGACAGAGAGACCATCATCAATATTATTATTCACCCAACCCATCCCCTCAACAAACCAAACGTCAGAGATTCCAAGTTGGTGTCTACTGA

Protein sequence

MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIPSPGEFCGPVSIPLPKGISITFRKMDDRKLPYRFLPDLELQRIKPLDLSEWQEEEKNVELEESETKQSDYSPKPLESLSQRQEEEKKNVQVKKQRGHHNYDSVKEEMNERGQRDHHQYYYSPNPSPQQTKRQRFQVGVY
BLAST of Cla013039 vs. TrEMBL
Match: A0A103XMK0_CYNCS (Oxoglutarate/iron-dependent dioxygenase OS=Cynara cardunculus var. scolymus GN=Ccrd_004465 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.6e-41
Identity = 89/164 (54.27%), Postives = 112/164 (68.29%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W +LP TCVP+SCIVNIYDEGDC PPHI HHDFLRPFCT+SFLTE NI+F + L+I 
Sbjct: 275 MVRWHVLPPTCVPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTISFLTECNILFGSSLKIV 334

Query: 61  SPGEFCGPVSIPLPKGISITFRKMDDRKLPYRFLPDLELQRIKPLDLSEWQE---EEKNV 120
            PGEF GPVSIPLP GISITFR+MD+ K+PY + PD ELQ ++PL L+  ++   ++K +
Sbjct: 335 GPGEFAGPVSIPLPTGISITFRRMDESKIPYGYSPDPELQGLEPLVLTPSRKPVSQQKQI 394

Query: 121 ELEESETKQS-------------DYSPKPLESLSQRQEEEKKNV 149
             +E     S             D+ P  + + SQ Q   KKNV
Sbjct: 395 VTKEVSPPASKPNGGPCFVIGGGDFPPLGVGNASQ-QRGHKKNV 437

BLAST of Cla013039 vs. TrEMBL
Match: V4V082_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001432mg PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 86/172 (50.00%), Postives = 102/172 (59.30%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W ILP TC+P+SCIVNIYDEGDC PPHI H DFLRPFCTVSFLTE NI+F + L+I 
Sbjct: 178 MVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHRDFLRPFCTVSFLTECNILFGSSLKIV 237

Query: 61  SPGEFCGPVSIPLPKG------------------------ISITFRKMDDRKLPYRFLPD 120
            PGEF GP+SIPLP G                        ISITFRKMDD KLPY+F PD
Sbjct: 238 GPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPAVPTKRISITFRKMDDSKLPYKFSPD 297

Query: 121 LELQRIKPLDLSEWQEEEKNVELEESETKQSDYSPKPLESLSQRQEEEKKNV 149
            EL  IKP+  S     +  +E    +   + YSP    +  Q+ +     V
Sbjct: 298 PELMEIKPMVNS--PSNKSPIEQNNRQKPLASYSPTTKSAFQQKNQNRNNKV 347

BLAST of Cla013039 vs. TrEMBL
Match: A0A067DCM5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025324mg PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-38
Identity = 86/172 (50.00%), Postives = 102/172 (59.30%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W ILP TC+P+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLTE NI+F + L+I 
Sbjct: 40  MVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIV 99

Query: 61  SPGEFCGPVSIPLPKG------------------------ISITFRKMDDRKLPYRFLPD 120
            PGEF GP+SIPLP G                        ISITFRKMDD KLPY+F PD
Sbjct: 100 GPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPAVPTKRISITFRKMDDSKLPYKFSPD 159

Query: 121 LELQRIKPLDLSEWQEEEKNVELEESETKQSDYSPKPLESLSQRQEEEKKNV 149
            EL  IK +  S     +  +E    +   + YSP    +  Q+ +     V
Sbjct: 160 PELMGIKAMVNS--PSNKSPIEQNNRQKPLASYSPTTKSAFQQKNQNRNNKV 209

BLAST of Cla013039 vs. TrEMBL
Match: A0A0B0PLM0_GOSAR (Putative alpha-ketoglutarate-dependent dioxygenase ABH5 OS=Gossypium arboreum GN=F383_11045 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.6e-38
Identity = 81/132 (61.36%), Postives = 93/132 (70.45%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W +LP+ CVP+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLT+ NI+F + L+I 
Sbjct: 245 MVRWHVLPTMCVPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTQCNILFGSSLKIV 304

Query: 61  SPGEFCGPVSIPLPKG------------------------ISITFRKMDDRKLPYRFLPD 109
           SPGEF GPVSIPLP G                        ISITFR+MD+ KLPY+FLPD
Sbjct: 305 SPGEFSGPVSIPLPVGSVLILNGNGADIAKHCVPAVPGKRISITFRRMDESKLPYKFLPD 364

BLAST of Cla013039 vs. TrEMBL
Match: A0A0B0PA40_GOSAR (Putative alpha-ketoglutarate-dependent dioxygenase ABH5 OS=Gossypium arboreum GN=F383_04882 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.6e-38
Identity = 81/132 (61.36%), Postives = 93/132 (70.45%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W +LP+ CVP+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLT+ NI+F + L+I 
Sbjct: 245 MVRWHVLPTMCVPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTQCNILFGSSLKIV 304

Query: 61  SPGEFCGPVSIPLPKG------------------------ISITFRKMDDRKLPYRFLPD 109
           SPGEF GPVSIPLP G                        ISITFR+MD+ KLPY+FLPD
Sbjct: 305 SPGEFSGPVSIPLPVGSVLILNGNGADIAKHCVPAVPGKRISITFRRMDESKLPYKFLPD 364

BLAST of Cla013039 vs. NCBI nr
Match: gi|976905884|gb|KVH93484.1| (Oxoglutarate/iron-dependent dioxygenase [Cynara cardunculus var. scolymus])

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40
Identity = 89/164 (54.27%), Postives = 112/164 (68.29%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W +LP TCVP+SCIVNIYDEGDC PPHI HHDFLRPFCT+SFLTE NI+F + L+I 
Sbjct: 275 MVRWHVLPPTCVPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTISFLTECNILFGSSLKIV 334

Query: 61  SPGEFCGPVSIPLPKGISITFRKMDDRKLPYRFLPDLELQRIKPLDLSEWQE---EEKNV 120
            PGEF GPVSIPLP GISITFR+MD+ K+PY + PD ELQ ++PL L+  ++   ++K +
Sbjct: 335 GPGEFAGPVSIPLPTGISITFRRMDESKIPYGYSPDPELQGLEPLVLTPSRKPVSQQKQI 394

Query: 121 ELEESETKQS-------------DYSPKPLESLSQRQEEEKKNV 149
             +E     S             D+ P  + + SQ Q   KKNV
Sbjct: 395 VTKEVSPPASKPNGGPCFVIGGGDFPPLGVGNASQ-QRGHKKNV 437

BLAST of Cla013039 vs. NCBI nr
Match: gi|1021585066|ref|XP_016181879.1| (PREDICTED: uncharacterized protein LOC107623972 isoform X2 [Arachis ipaensis])

HSP 1 Score: 174.1 bits (440), Expect = 2.4e-40
Identity = 82/163 (50.31%), Postives = 111/163 (68.10%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W I+PSTC+PDSCIVNIYDEGDC PPHI HHDFLRPF TVSFL + +I+F   L+  
Sbjct: 249 MVRWNIVPSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFYTVSFLNQCDILFGKNLQAL 308

Query: 61  SPGEFCGPVSIPLPKGISITFRKMDDRKLPYRFLPDLELQRIKPLDLSEWQEEEKNVELE 120
           SPGEF GP SIPLP GISITFRKMD +K+PY+FLPD EL+ IKP  +S  ++    ++ +
Sbjct: 309 SPGEFSGPASIPLPVGISITFRKMDPKKVPYKFLPDPELEGIKPRFISSPKKPVIEIQQQ 368

Query: 121 ESETKQSDYSPKPLESLSQRQEEEKKNVQVKKQRGHHNYDSVK 164
           ++++ +S+   +      ++    +  V      G H++   K
Sbjct: 369 KAQSAESESEYETFSKNRKKMFNVEGEVPPLNGIGRHSFGKFK 411

BLAST of Cla013039 vs. NCBI nr
Match: gi|567878651|ref|XP_006431884.1| (hypothetical protein CICLE_v10001432mg [Citrus clementina])

HSP 1 Score: 167.9 bits (424), Expect = 1.7e-38
Identity = 86/172 (50.00%), Postives = 102/172 (59.30%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W ILP TC+P+SCIVNIYDEGDC PPHI H DFLRPFCTVSFLTE NI+F + L+I 
Sbjct: 178 MVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHRDFLRPFCTVSFLTECNILFGSSLKIV 237

Query: 61  SPGEFCGPVSIPLPKG------------------------ISITFRKMDDRKLPYRFLPD 120
            PGEF GP+SIPLP G                        ISITFRKMDD KLPY+F PD
Sbjct: 238 GPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPAVPTKRISITFRKMDDSKLPYKFSPD 297

Query: 121 LELQRIKPLDLSEWQEEEKNVELEESETKQSDYSPKPLESLSQRQEEEKKNV 149
            EL  IKP+  S     +  +E    +   + YSP    +  Q+ +     V
Sbjct: 298 PELMEIKPMVNS--PSNKSPIEQNNRQKPLASYSPTTKSAFQQKNQNRNNKV 347

BLAST of Cla013039 vs. NCBI nr
Match: gi|641820898|gb|KDO40724.1| (hypothetical protein CISIN_1g025324mg [Citrus sinensis])

HSP 1 Score: 167.2 bits (422), Expect = 3.0e-38
Identity = 86/172 (50.00%), Postives = 102/172 (59.30%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W ILP TC+P+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFLTE NI+F + L+I 
Sbjct: 40  MVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNILFGSSLKIV 99

Query: 61  SPGEFCGPVSIPLPKG------------------------ISITFRKMDDRKLPYRFLPD 120
            PGEF GP+SIPLP G                        ISITFRKMDD KLPY+F PD
Sbjct: 100 GPGEFSGPISIPLPVGSVLILNGNGADVAKHCVPAVPTKRISITFRKMDDSKLPYKFSPD 159

Query: 121 LELQRIKPLDLSEWQEEEKNVELEESETKQSDYSPKPLESLSQRQEEEKKNV 149
            EL  IK +  S     +  +E    +   + YSP    +  Q+ +     V
Sbjct: 160 PELMGIKAMVNS--PSNKSPIEQNNRQKPLASYSPTTKSAFQQKNQNRNNKV 209

BLAST of Cla013039 vs. NCBI nr
Match: gi|568833856|ref|XP_006471082.1| (PREDICTED: uncharacterized protein LOC102630212 [Citrus sinensis])

HSP 1 Score: 166.4 bits (420), Expect = 5.1e-38
Identity = 86/172 (50.00%), Postives = 102/172 (59.30%), Query Frame = 1

Query: 1   MVKWLILPSTCVPDSCIVNIYDEGDCTPPHIHHHDFLRPFCTVSFLTESNIIFATRLEIP 60
           MV+W ILP TC+P+SCIVNIYDEGDC PPHI HHDFLRPFCTVSFL E +I+F + L+I 
Sbjct: 250 MVRWHILPPTCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLAECDILFGSNLKIV 309

Query: 61  SPGEFCGPVSIPLPKG------------------------ISITFRKMDDRKLPYRFLPD 120
            PGEF GPVSIPLP G                        ISITFRKMDD KLPY+F PD
Sbjct: 310 GPGEFSGPVSIPLPVGSVLILNGNGADVAKHCVPAVPTKRISITFRKMDDSKLPYKFSPD 369

Query: 121 LELQRIKPLDLSEWQEEEKNVELEESETKQSDYSPKPLESLSQRQEEEKKNV 149
            EL  IKP+  S     +  +E    +   + YSP    +  Q+ +     V
Sbjct: 370 PELMGIKPVVNS--PSNKSPIEQNSLQKPLASYSPTAKSAFQQKNQNRNNKV 419

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A103XMK0_CYNCS7.6e-4154.27Oxoglutarate/iron-dependent dioxygenase OS=Cynara cardunculus var. scolymus GN=C... [more]
V4V082_9ROSI1.2e-3850.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001432mg PE=4 SV=1[more]
A0A067DCM5_CITSI2.1e-3850.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025324mg PE=4 SV=1[more]
A0A0B0PLM0_GOSAR4.6e-3861.36Putative alpha-ketoglutarate-dependent dioxygenase ABH5 OS=Gossypium arboreum GN... [more]
A0A0B0PA40_GOSAR4.6e-3861.36Putative alpha-ketoglutarate-dependent dioxygenase ABH5 OS=Gossypium arboreum GN... [more]
Match NameE-valueIdentityDescription
gi|976905884|gb|KVH93484.1|1.1e-4054.27Oxoglutarate/iron-dependent dioxygenase [Cynara cardunculus var. scolymus][more]
gi|1021585066|ref|XP_016181879.1|2.4e-4050.31PREDICTED: uncharacterized protein LOC107623972 isoform X2 [Arachis ipaensis][more]
gi|567878651|ref|XP_006431884.1|1.7e-3850.00hypothetical protein CICLE_v10001432mg [Citrus clementina][more]
gi|641820898|gb|KDO40724.1|3.0e-3850.00hypothetical protein CISIN_1g025324mg [Citrus sinensis][more]
gi|568833856|ref|XP_006471082.1|5.1e-3850.00PREDICTED: uncharacterized protein LOC102630212 [Citrus sinensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027450AlkB-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013039Cla013039.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likeGENE3DG3DSA:2.60.120.590coord: 10..48
score: 4.
NoneNo IPR availableunknownCoilCoilcoord: 134..154
scor
NoneNo IPR availablePANTHERPTHR31447FAMILY NOT NAMEDcoord: 1..141
score: 7.7
NoneNo IPR availablePANTHERPTHR31447:SF3SUBFAMILY NOT NAMEDcoord: 1..141
score: 7.7
NoneNo IPR availableunknownSSF51197Clavaminate synthase-likecoord: 9..84
score: 4.6