MELO3C019477.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C019477.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionOxidoreductase, 2OG-Fe(II) oxygenase family protein
Locationchr06 : 11435593 .. 11435829 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAAGAGATTCGTGAAGTGGCTGATTCTACATAGTACATGCATCCCCGATAGCTGCATCGTAAACATATATGATGAAGGAGATTGCATTCCTCCACACATTGATCACCATGATTTTCTAAGACCCTTTTGCACTGTGTCATTTCAAACAGAAAGTAACATCATATTTGGCACTCGACTAGAAGTTCTTAGTCCTAGAGAGTTCTCTGGTCCTGTCTCGACTCCTTTGCTCTAA

mRNA sequence

ATGATCAAGAGATTCGTGAAGTGGCTGATTCTACATAGTACATGCATCCCCGATAGCTGCATCGTAAACATATATGATGAAGGAGATTGCATTCCTCCACACATTGATCACCATGATTTTCTAAGACCCTTTTGCACTGTGTCATTTCAAACAGAAAGTAACATCATATTTGGCACTCGACTAGAAGTTCTTAGTCCTAGAGAGTTCTCTGGTCCTGTCTCGACTCCTTTGCTCTAA

Coding sequence (CDS)

ATGATCAAGAGATTCGTGAAGTGGCTGATTCTACATAGTACATGCATCCCCGATAGCTGCATCGTAAACATATATGATGAAGGAGATTGCATTCCTCCACACATTGATCACCATGATTTTCTAAGACCCTTTTGCACTGTGTCATTTCAAACAGAAAGTAACATCATATTTGGCACTCGACTAGAAGTTCTTAGTCCTAGAGAGTTCTCTGGTCCTGTCTCGACTCCTTTGCTCTAA

Protein sequence

MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTRLEVLSPREFSGPVSTPLL
Homology
[Close]
BLAST of MELO3C019477.2 vs. NCBI nr
Match: XP_022149186.1 (RNA demethylase ALKBH5-like [Momordica charantia])

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-32
Identity = 66/77 (85.71%), Postives = 70/77 (90.91%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR VKW IL  TC+PDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TESNI+FG+R
Sbjct: 311 MIKRMVKWHILPRTCVPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTESNILFGSR 370

Query: 61  LEVLSPREFSGPVSTPL 78
           LE+LSP EFSGPVS PL
Sbjct: 371 LEILSPGEFSGPVSIPL 387

[Close]
BLAST of MELO3C019477.2 vs. NCBI nr
Match: XP_021672522.1 (uncharacterized protein LOC110659008 [Hevea brasiliensis])

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-30
Identity = 62/77 (80.52%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L  TCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 281 MIKRMVRWHVLPPTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNIVFGSN 340

Query: 61  LEVLSPREFSGPVSTPL 78
           L++LSP EFSGPVS PL
Sbjct: 341 LKILSPGEFSGPVSMPL 357

[Close]
BLAST of MELO3C019477.2 vs. NCBI nr
Match: XP_021617214.1 (uncharacterized protein LOC110618397 isoform X1 [Manihot esculenta] >OAY44915.1 hypothetical protein MANES_07G016100 [Manihot esculenta])

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-30
Identity = 61/77 (79.22%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L +TCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 280 MIKRMVRWHVLPATCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNIVFGSN 339

Query: 61  LEVLSPREFSGPVSTPL 78
           L++LSP EFSGPVS PL
Sbjct: 340 LKILSPGEFSGPVSIPL 356

[Close]
BLAST of MELO3C019477.2 vs. NCBI nr
Match: XP_021617215.1 (uncharacterized protein LOC110618397 isoform X2 [Manihot esculenta])

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-30
Identity = 61/77 (79.22%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L +TCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 255 MIKRMVRWHVLPATCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNIVFGSN 314

Query: 61  LEVLSPREFSGPVSTPL 78
           L++LSP EFSGPVS PL
Sbjct: 315 LKILSPGEFSGPVSIPL 331

[Close]
BLAST of MELO3C019477.2 vs. NCBI nr
Match: EOX97320.1 (Oxidoreductase, putative [Theobroma cacao])

HSP 1 Score: 139.8 bits (351), Expect = 3.9e-30
Identity = 61/77 (79.22%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W IL  TC+P+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TESNI+FG+ 
Sbjct: 248 MIKRMVRWHILPPTCVPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTESNILFGSS 307

Query: 61  LEVLSPREFSGPVSTPL 78
           L+++SP EFSGPVS PL
Sbjct: 308 LKIVSPGEFSGPVSIPL 324

[Close]
BLAST of MELO3C019477.2 vs. TAIR10
Match: AT4G36090.3 (oxidoreductase, 2OG-Fe(II) oxygenase family protein)

HSP 1 Score: 123.2 bits (308), Expect = 6.9e-29
Identity = 54/77 (70.13%), Postives = 63/77 (81.82%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +IKR V W +L  TC+PDSCIVNIY+E DCIPPHID+HDFLRPFCTVSF +E NI+FG+ 
Sbjct: 306 IIKRLVGWHVLPPTCVPDSCIVNIYEEDDCIPPHIDNHDFLRPFCTVSFLSECNILFGSN 365

Query: 61  LEVLSPREFSGPVSTPL 78
           L+VL P EFSG  S PL
Sbjct: 366 LKVLGPGEFSGSYSIPL 382

[Close]
BLAST of MELO3C019477.2 vs. TAIR10
Match: AT2G17970.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 121.3 bits (303), Expect = 2.6e-28
Identity = 50/77 (64.94%), Postives = 64/77 (83.12%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +I++ +KW +L  TC+PDSCIVNIYDEGDCIPPHID+HDFLRPFCT+SF +E +I+FG+ 
Sbjct: 302 IIRKLIKWHVLPPTCVPDSCIVNIYDEGDCIPPHIDNHDFLRPFCTISFLSECDILFGSN 361

Query: 61  LEVLSPREFSGPVSTPL 78
           L+V  P +FSG  S PL
Sbjct: 362 LKVEGPGDFSGSYSIPL 378

[Close]
BLAST of MELO3C019477.2 vs. TAIR10
Match: AT1G48980.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 2.9e-27
Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +I+R VKW +L  TC+PD C+VNIYDEGDCIPPHIDHHDFLRPFCTVSF +E NI+FG+ 
Sbjct: 184 IIRRLVKWHVLPPTCVPDCCVVNIYDEGDCIPPHIDHHDFLRPFCTVSFLSECNILFGSN 243

Query: 61  LEVLSPREFSG 72
           L+V    E+SG
Sbjct: 244 LKVEETGEYSG 254

[Close]
BLAST of MELO3C019477.2 vs. TAIR10
Match: AT4G02940.1 (oxidoreductase, 2OG-Fe(II) oxygenase family protein)

HSP 1 Score: 40.4 bits (93), Expect = 5.8e-04
Identity = 20/77 (25.97%), Postives = 38/77 (49.35%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           +I  FV W ++     P+ C++N ++EG+   P +      +P  T+   +ES + +G  
Sbjct: 328 VIDHFVTWRLIPEYKRPNGCVINFFEEGEYSQPFLKPPHLEQPISTLVL-SESTMAYGRI 387

Query: 61  LEVLSPREFSGPVSTPL 78
           L   +   F GP++  L
Sbjct: 388 LSSDNEGNFRGPLTLSL 403

[Close]
BLAST of MELO3C019477.2 vs. TrEMBL
Match: tr|A0A2C9VHM6|A0A2C9VHM6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G016100 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-30
Identity = 61/77 (79.22%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L +TCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TE NI+FG+ 
Sbjct: 280 MIKRMVRWHVLPATCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTECNIVFGSN 339

Query: 61  LEVLSPREFSGPVSTPL 78
           L++LSP EFSGPVS PL
Sbjct: 340 LKILSPGEFSGPVSIPL 356

[Close]
BLAST of MELO3C019477.2 vs. TrEMBL
Match: tr|A0A061DXA1|A0A061DXA1_THECC (Oxidoreductase, putative OS=Theobroma cacao OX=3641 GN=TCM_006385 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-30
Identity = 61/77 (79.22%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W IL  TC+P+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TESNI+FG+ 
Sbjct: 248 MIKRMVRWHILPPTCVPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTESNILFGSS 307

Query: 61  LEVLSPREFSGPVSTPL 78
           L+++SP EFSGPVS PL
Sbjct: 308 LKIVSPGEFSGPVSIPL 324

[Close]
BLAST of MELO3C019477.2 vs. TrEMBL
Match: tr|A0A2G5CH57|A0A2G5CH57_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_05700108v1 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-29
Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR VKW IL STCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TESNI+FG+ 
Sbjct: 237 MIKRLVKWHILPSTCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTESNILFGSN 296

Query: 61  LEVLSPREFSGPVSTPL 78
           L++++P EF G  S PL
Sbjct: 297 LKIVAPGEFDGSASIPL 313

[Close]
BLAST of MELO3C019477.2 vs. TrEMBL
Match: tr|A0A2G5C0M3|A0A2G5C0M3_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_22100001v1 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-29
Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR VKW IL STCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TESNI+FG+ 
Sbjct: 237 MIKRLVKWHILPSTCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTESNILFGSN 296

Query: 61  LEVLSPREFSGPVSTPL 78
           L++++P EF G  S PL
Sbjct: 297 LKIVAPGEFDGSASIPL 313

[Close]
BLAST of MELO3C019477.2 vs. TrEMBL
Match: tr|A0A1R3HYJ1|A0A1R3HYJ1_COCAP (Oxoglutarate/iron-dependent dioxygenase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16203 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-29
Identity = 60/77 (77.92%), Postives = 67/77 (87.01%), Query Frame = 0 

Query: 1   MIKRFVKWLILHSTCIPDSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFQTESNIIFGTR 60
           MIKR V+W +L  TCIP+SCIVNIYDEGDCIPPHIDHHDFLRPFCTVSF TESNIIFG+ 
Sbjct: 241 MIKRLVRWHVLPPTCIPNSCIVNIYDEGDCIPPHIDHHDFLRPFCTVSFLTESNIIFGSN 300

Query: 61  LEVLSPREFSGPVSTPL 78
           L+++ P EFSGPVS  L
Sbjct: 301 LKIVGPGEFSGPVSISL 317

The following BLAST results are available for this feature:
BLAST of MELO3C019477.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022149186.11.4e-3285.71RNA demethylase ALKBH5-like [Momordica charantia][more]
XP_021672522.11.0e-3080.52uncharacterized protein LOC110659008 [Hevea brasiliensis][more]
XP_021617214.12.3e-3079.22uncharacterized protein LOC110618397 isoform X1 [Manihot esculenta] >OAY44915.1 ... [more]
XP_021617215.12.3e-3079.22uncharacterized protein LOC110618397 isoform X2 [Manihot esculenta][more]
EOX97320.13.9e-3079.22Oxidoreductase, putative [Theobroma cacao][more]
BLAST of MELO3C019477.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36090.36.9e-2970.13oxidoreductase, 2OG-Fe(II) oxygenase family protein[more]
AT2G17970.12.6e-2864.942-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein[more]
AT1G48980.12.9e-2769.012-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein[more]
AT4G02940.15.8e-0425.97oxidoreductase, 2OG-Fe(II) oxygenase family protein[more]
BLAST of MELO3C019477.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C019477.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2C9VHM6|A0A2C9VHM6_MANES1.5e-3079.22Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G016100 PE=4 SV=... [more]
tr|A0A061DXA1|A0A061DXA1_THECC2.6e-3079.22Oxidoreductase, putative OS=Theobroma cacao OX=3641 GN=TCM_006385 PE=4 SV=1[more]
tr|A0A2G5CH57|A0A2G5CH57_AQUCA2.9e-2977.92Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_05700108v1 PE=4... [more]
tr|A0A2G5C0M3|A0A2G5C0M3_AQUCA2.9e-2977.92Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_22100001v1 PE=4... [more]
tr|A0A1R3HYJ1|A0A1R3HYJ1_COCAP2.9e-2977.92Oxoglutarate/iron-dependent dioxygenase OS=Corchorus capsularis OX=210143 GN=CCA... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR037151AlkB-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019477.2.1MELO3C019477.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037151Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyGENE3DG3DSA:2.60.120.590coord: 1..78
e-value: 1.7E-19
score: 72.1
NoneNo IPR availablePANTHERPTHR31447FAMILY NOT NAMEDcoord: 1..77
NoneNo IPR availablePANTHERPTHR31447:SF3SUBFAMILY NOT NAMEDcoord: 1..77
NoneNo IPR availableSUPERFAMILYSSF51197Clavaminate synthase-likecoord: 8..60

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C019477.2Cla013039Watermelon (97103) v1medwmB448
MELO3C019477.2ClCG05G009700Watermelon (Charleston Gray)medwcgB417
MELO3C019477.2Cla97C05G092060Watermelon (97103) v2medwmbB424
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019477.2Silver-seed gourdcarmedB0064
MELO3C019477.2Silver-seed gourdcarmedB0661
MELO3C019477.2Cucumber (Chinese Long) v3cucmedB240
MELO3C019477.2Cucumber (Chinese Long) v3cucmedB246
MELO3C019477.2Wax gourdmedwgoB531
MELO3C019477.2Cucumber (Gy14) v2cgybmedB210
MELO3C019477.2Cucumber (Gy14) v2cgybmedB215
MELO3C019477.2Cucumber (Gy14) v1cgymedB002
MELO3C019477.2Cucumber (Gy14) v1cgymedB026
MELO3C019477.2Cucurbita maxima (Rimu)cmamedB346
MELO3C019477.2Cucurbita maxima (Rimu)cmamedB777
MELO3C019477.2Cucurbita moschata (Rifu)cmomedB332
MELO3C019477.2Cucurbita moschata (Rifu)cmomedB774
MELO3C019477.2Cucurbita pepo (Zucchini)cpemedB234
MELO3C019477.2Cucurbita pepo (Zucchini)cpemedB481
MELO3C019477.2Wild cucumber (PI 183967)cpimedB233
MELO3C019477.2Wild cucumber (PI 183967)cpimedB239
MELO3C019477.2Cucumber (Chinese Long) v2cumedB232
MELO3C019477.2Cucumber (Chinese Long) v2cumedB238
MELO3C019477.2Bottle gourd (USVL1VR-Ls)lsimedB384