Cla009170 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTTGATTATGCAATTTTTACTGGGACATCATTGGTTGGAGATGGGCAACTTAATTACCAAAACTTGTTTGATGCCATGTTGGACGTTGTTTACTCTACTTTGGAGAATCGTGGTGGAGGATCATTGGAGATTGTTGTATCCGGGACTGGTTGGCCAACGGATGGTGGAGAGGCGGCAACGATAGACAATGCAAGGACTTACAACAACAATCTAAGTCAACATGTGAAACAAGGGACTGCAAACAAGACAAGGAAGGGTTATTGA ATGGGATTTGATTATGCAATTTTTACTGGGACATCATTGGTTGGAGATGGGCAACTTAATTACCAAAACTTGTTTGATGCCATGTTGGACGTTGTTTACTCTACTTTGGAGAATCGTGGTGGAGGATCATTGGAGATTGTTGTATCCGGGACTGGTTGGCCAACGGATGGTGGAGAGGCGGCAACGATAGACAATGCAAGGACTTACAACAACAATCTAAGTCAACATGTGAAACAAGGGACTGCAAACAAGACAAGGAAGGGTTATTGA ATGGGATTTGATTATGCAATTTTTACTGGGACATCATTGGTTGGAGATGGGCAACTTAATTACCAAAACTTGTTTGATGCCATGTTGGACGTTGTTTACTCTACTTTGGAGAATCGTGGTGGAGGATCATTGGAGATTGTTGTATCCGGGACTGGTTGGCCAACGGATGGTGGAGAGGCGGCAACGATAGACAATGCAAGGACTTACAACAACAATCTAAGTCAACATGTGAAACAAGGGACTGCAAACAAGACAAGGAAGGGTTATTGA MGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTDGGEAATIDNARTYNNNLSQHVKQGTANKTRKGY
BLAST of Cla009170 vs. Swiss-Prot
Match: BG1_ARATH (Probable glucan endo-1,3-beta-glucosidase BG1 OS=Arabidopsis thaliana GN=BG1 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.7e-22 Identity = 52/85 (61.18%), Postives = 58/85 (68.24%), Query Frame = 1
BLAST of Cla009170 vs. Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.7e-22 Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 1
BLAST of Cla009170 vs. Swiss-Prot
Match: E13B_VITVI (Glucan endo-1,3-beta-glucosidase OS=Vitis vinifera GN=VIT_06s0061g00120 PE=1 SV=2) HSP 1 Score: 103.6 bits (257), Expect = 1.1e-21 Identity = 49/83 (59.04%), Postives = 60/83 (72.29%), Query Frame = 1
BLAST of Cla009170 vs. Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 2.5e-21 Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 1
BLAST of Cla009170 vs. Swiss-Prot
Match: BG3_ARATH (Probable glucan endo-1,3-beta-glucosidase BG3 OS=Arabidopsis thaliana GN=BG3 PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.3e-20 Identity = 50/82 (60.98%), Postives = 58/82 (70.73%), Query Frame = 1
BLAST of Cla009170 vs. TrEMBL
Match: A0A0A0LYQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555080 PE=3 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 7.2e-31 Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 1
BLAST of Cla009170 vs. TrEMBL
Match: O80357_CUCSA (Beta-1,3-glucanase (Fragment) OS=Cucumis sativus GN=beta-1,3-glucanase PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.5e-25 Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 1
BLAST of Cla009170 vs. TrEMBL
Match: A0A145YQC1_ROSRU (Beta-1,3-glucanase OS=Rosa rugosa GN=Glu PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 3.8e-24 Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 1
BLAST of Cla009170 vs. TrEMBL
Match: U5FNT7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s05780g PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.9e-23 Identity = 57/85 (67.06%), Postives = 65/85 (76.47%), Query Frame = 1
BLAST of Cla009170 vs. TrEMBL
Match: E9N6U2_9ROSI (1,3-beta-D-glucanase GH17_101 OS=Populus tremula x Populus tremuloides PE=3 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 7.2e-23 Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 1
BLAST of Cla009170 vs. NCBI nr
Match: gi|778662097|ref|XP_011659353.1| (PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 1.0e-30 Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 1
BLAST of Cla009170 vs. NCBI nr
Match: gi|700210876|gb|KGN65972.1| (hypothetical protein Csa_1G555080 [Cucumis sativus]) HSP 1 Score: 141.0 bits (354), Expect = 1.0e-30 Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 1
BLAST of Cla009170 vs. NCBI nr
Match: gi|659118414|ref|XP_008459107.1| (PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis melo]) HSP 1 Score: 134.4 bits (337), Expect = 9.6e-29 Identity = 65/84 (77.38%), Postives = 69/84 (82.14%), Query Frame = 1
BLAST of Cla009170 vs. NCBI nr
Match: gi|3273194|dbj|BAA31142.1| (beta-1,3-glucanase [Cucumis sativus]) HSP 1 Score: 123.2 bits (308), Expect = 2.2e-25 Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 1
BLAST of Cla009170 vs. NCBI nr
Match: gi|1015887691|gb|AMW88247.1| (beta-1,3-glucanase [Rosa rugosa]) HSP 1 Score: 118.6 bits (296), Expect = 5.5e-24 Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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