Cla005576 (gene) Watermelon (97103) v1

Overview
NameCla005576
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCalmodulin-like protein (AHRD V1 ***- Q6RZU7_MUSAC); contains Interpro domain(s) IPR011992 EF-Hand type
LocationChr9 : 33792286 .. 33792762 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCCATTGAACTCCTCCGATCTGCAGAGAATTTTCGAAACGATCGACACAAATGGCGACGGTTTCGTGAGCATGGAGGAGCTCAATTGGCTGCTTAATCGAATCGGCGTCGACCTAATTTCGGAGGATTTGGAGTCATTAATTGGTAAGTCGAAGATTGATTTGAATGAATTCTTGTGTCTGTACGAATCGATAAGGGAGAAAAACGAGGGTGAAAACAGGGGAAATGAGGAGGAGATTGAGAGCGATCTTTGGAATGCATTCAATGTGTTCGACGAAAATCGCGATGGTTTCATTTCGTGGGATGAGCTTCGGAATGTGTTGGTGAGATTGGGGCTTTGGGTTGATGAGCACTGCGATGGCGGAGGTGATTATTGTAGGCGTATGATCGGCGCGTTTGATATGGATTTGGATGGTCGGCTTGATTTTCAGGAATTCAAGAACATGATGAACTCTTCCAATTCTTCCTCTTAG

mRNA sequence

ATGTCTCCATTGAACTCCTCCGATCTGCAGAGAATTTTCGAAACGATCGACACAAATGGCGACGGTTTCGTGAGCATGGAGGAGCTCAATTGGCTGCTTAATCGAATCGGCGTCGACCTAATTTCGGAGGATTTGGAGTCATTAATTGGTAAGTCGAAGATTGATTTGAATGAATTCTTGTGTCTGTACGAATCGATAAGGGAGAAAAACGAGGGTGAAAACAGGGGAAATGAGGAGGAGATTGAGAGCGATCTTTGGAATGCATTCAATGTGTTCGACGAAAATCGCGATGGTTTCATTTCGTGGGATGAGCTTCGGAATGTGTTGGTGAGATTGGGGCTTTGGGTTGATGAGCACTGCGATGGCGGAGGTGATTATTGTAGGCGTATGATCGGCGCGTTTGATATGGATTTGGATGGTCGGCTTGATTTTCAGGAATTCAAGAACATGATGAACTCTTCCAATTCTTCCTCTTAG

Coding sequence (CDS)

ATGTCTCCATTGAACTCCTCCGATCTGCAGAGAATTTTCGAAACGATCGACACAAATGGCGACGGTTTCGTGAGCATGGAGGAGCTCAATTGGCTGCTTAATCGAATCGGCGTCGACCTAATTTCGGAGGATTTGGAGTCATTAATTGGTAAGTCGAAGATTGATTTGAATGAATTCTTGTGTCTGTACGAATCGATAAGGGAGAAAAACGAGGGTGAAAACAGGGGAAATGAGGAGGAGATTGAGAGCGATCTTTGGAATGCATTCAATGTGTTCGACGAAAATCGCGATGGTTTCATTTCGTGGGATGAGCTTCGGAATGTGTTGGTGAGATTGGGGCTTTGGGTTGATGAGCACTGCGATGGCGGAGGTGATTATTGTAGGCGTATGATCGGCGCGTTTGATATGGATTTGGATGGTCGGCTTGATTTTCAGGAATTCAAGAACATGATGAACTCTTCCAATTCTTCCTCTTAG

Protein sequence

MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLIGKSKIDLNEFLCLYESIREKNEGENRGNEEEIESDLWNAFNVFDENRDGFISWDELRNVLVRLGLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMMNSSNSSS
Homology
[Close]
BLAST of Cla005576 vs. Swiss-Prot
Match: CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24
Identity = 62/151 (41.06%), Postives = 96/151 (63.58%), Query Frame = 1 

Query: 4   LNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIG-VDLISEDLESLIGKSKIDLNEFLCL 63
           + ++DL+R+F+T+D N DG V+++EL W+L+++G  +   ++LE ++GK  +DL+EFL  
Sbjct: 6   ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRF 65

Query: 64  YESIREKNEGENRGNEEEIESD--LWNAFNVFDENRDGFISWDELRNVLVRLGLWVDEHC 123
           Y      ++G  +  +   ++D  +  AFNVFD N DG+IS +ELR+VL RLG   +E  
Sbjct: 66  YYDAVLDSKGSKKNIDVVADNDEAIARAFNVFDVNGDGYISAEELRDVLERLGF--EEEA 125

Query: 124 DGGGDYCRRMIGAFDMDLDGRLDFQEFKNMM 152
                 C RMI   D +LDG +DF+EFKNM+
Sbjct: 126 KAWD--CGRMIRVHDKNLDGFVDFEEFKNMI 152

[Close]
BLAST of Cla005576 vs. Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 6.3e-23
Identity = 61/161 (37.89%), Postives = 95/161 (59.01%), Query Frame = 1 

Query: 4   LNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLI------GKSKIDLN 63
           ++ S+L+R+F+  D NGDG ++ EELN  L  +G+ +  +DL  +I      G   +D++
Sbjct: 61  IDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDID 120

Query: 64  EFLCLYESIREKNEGENRGNEEEIESDLWNAFNVFDENRDGFISWDELRNVLVRLGLWVD 123
           EF  LY SI +++  +    EE    D+ +AFNVFD++ DGFI+ +EL++V+  LGL   
Sbjct: 121 EFESLYSSIVDEHHNDGETEEE----DMKDAFNVFDQDGDGFITVEELKSVMASLGLKQG 180

Query: 124 EHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMMNSSNSSS 159
           +  DG    C++MI   D D DGR++++EF  MM     SS
Sbjct: 181 KTLDG----CKKMIMQVDADGDGRVNYKEFLQMMKGGGFSS 213

[Close]
BLAST of Cla005576 vs. Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 62/154 (40.26%), Postives = 89/154 (57.79%), Query Frame = 1 

Query: 4   LNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLI------GKSKIDLN 63
           ++ ++L RIF+  D NGDG ++ +ELN  L  +G+ +  +DL  +I      G   +D+ 
Sbjct: 1   MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 64  EFLCLYESIREKNEGENRGNEEEIESDLWNAFNVFDENRDGFISWDELRNVLVRLGLWVD 123
           EF  LY++I E         E + E D+  AFNVFD+NRDGFI+ +ELR+VL  LGL   
Sbjct: 61  EFGGLYQTIME---------ERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGLKQG 120

Query: 124 EHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMM 152
              +     C+RMI   D+D DG ++F+EFK MM
Sbjct: 121 RTLED----CKRMISKVDVDGDGMVNFKEFKQMM 141

[Close]
BLAST of Cla005576 vs. Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-22
Identity = 69/167 (41.32%), Postives = 97/167 (58.08%), Query Frame = 1 

Query: 4   LNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLI------GKSKIDLN 63
           LN+  LQRIF+  D NGDGF+++EEL+  L R+G++    DL+S +      G + ++ +
Sbjct: 25  LNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFD 84

Query: 64  EFLCLYESIREK------NEGENR---GNEEEIESDLWNAFNVFDENRDGFISWDELRNV 123
           +F  L++++ +         GEN     +  E ESDL  AF VFDEN DGFIS  EL+ V
Sbjct: 85  DFSSLHKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTV 144

Query: 124 LVRLGLWVDEHCDGGGDYCR--RMIGAFDMDLDGRLDFQEFKNMMNS 154
           L +LGL        GG+  R  +MI + D + DGR+DF EFKNMM +
Sbjct: 145 LKKLGL------PEGGEMERVEKMIVSVDRNQDGRVDFFEFKNMMRT 185

[Close]
BLAST of Cla005576 vs. Swiss-Prot
Match: CML22_ORYSJ (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.3e-22
Identity = 63/157 (40.13%), Postives = 88/157 (56.05%), Query Frame = 1 

Query: 5   NSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLI------GKSKIDLNE 64
           ++++L R+FE  D NGDG ++ EEL   L ++G+ + +++L ++I      G   +D+ E
Sbjct: 89  DAAELARVFELFDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDANGDGCVDVEE 148

Query: 65  FLCLYESIR----EKNEGENRGNEEEIESDLWNAFNVFDENRDGFISWDELRNVLVRLGL 124
           F  LY SI     +  +G  +  EEE + D+  AF VFD N DG+I+ DEL  VL  LGL
Sbjct: 149 FGELYRSIMAGGDDSKDGRAKEEEEEEDGDMREAFRVFDANGDGYITVDELGAVLASLGL 208

Query: 125 WVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMM 152
                     + CRRMIG  D D DGR+DF EF  MM
Sbjct: 209 KQGR----TAEECRRMIGQVDRDGDGRVDFHEFLQMM 241


HSP 2 Score: 37.0 bits (84), Expect = 2.3e-01
Identity = 24/83 (28.92%), Postives = 41/83 (49.40%), Query Frame = 1 

Query: 72  GENRGNEEEIES-DLWNAFNVFDENRDGFISWDELRNVLVRLGLWVDEHCDGGGDYCRRM 131
           G  +  +++ ++ +L   F +FD N DG I+ +EL + L +LG+ V        D    +
Sbjct: 79  GSKKKQQQQADAAELARVFELFDRNGDGRITREELEDSLGKLGIPVP------ADELAAV 138

Query: 132 IGAFDMDLDGRLDFQEFKNMMNS 154
           I   D + DG +D +EF  +  S
Sbjct: 139 IARIDANGDGCVDVEEFGELYRS 155

[Close]
BLAST of Cla005576 vs. TrEMBL
Match: V4TCZ3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002706mg PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.3e-37
Identity = 91/170 (53.53%), Postives = 116/170 (68.24%), Query Frame = 1 

Query: 1   MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLIGKSKIDLNEFL 60
           M PL+++DLQRIF+ +D NGD  VS+EELNWLL RIGV L  E+LES +GKS +DLNEFL
Sbjct: 1   MCPLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFL 60

Query: 61  CLYESIREKN-------------EGENRGNEEEIE-SDLWNAFNVFDENRDGFISWDELR 120
             ++SI ++N              G++  N+++ E SDL  AFNVFD N DGFIS +EL+
Sbjct: 61  FFWKSISKQNNNKVDDHEVKDEINGDDNENDDDGEISDLLEAFNVFDLNGDGFISCEELQ 120

Query: 121 NVLVRLGLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMMNSSNS 157
           NVL RLGLW ++     G  C RMI  +D +LDG LDF+EFKNMM  S S
Sbjct: 121 NVLSRLGLWDEK----SGKDCTRMICMYDTNLDGVLDFEEFKNMMLLSKS 166

[Close]
BLAST of Cla005576 vs. TrEMBL
Match: W9RRJ8_9ROSA (Putative calcium-binding protein CML44 OS=Morus notabilis GN=L484_003448 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 9.1e-37
Identity = 88/165 (53.33%), Postives = 116/165 (70.30%), Query Frame = 1 

Query: 1   MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVD--LIS-EDLESLIGKSKIDLN 60
           M  L+++DL RIF+ +D NGDG VS++ELNWLL RIGVD  LIS  +LESL+GKS +  +
Sbjct: 1   MCSLSANDLNRIFKKLDKNGDGLVSVDELNWLLERIGVDIQLISLTELESLVGKSSLSFD 60

Query: 61  EFLCLYESIREKNEGENRGNE-----------EEIESDLWNAFNVFDENRDGFISWDELR 120
           EFL  Y+SI   N GE++G +           +  +SDL  AF VFD N DGFIS +EL+
Sbjct: 61  EFLFFYKSISNPNNGESKGGDIDQDQDHDHDHDGEDSDLVKAFKVFDINDDGFISCEELQ 120

Query: 121 NVLVRLGLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMM 152
           +VL+RLGL +++H   G D C+ MIGAFD + DG+LDF+EFKNMM
Sbjct: 121 SVLIRLGL-MEDHNSSGRDNCKSMIGAFDANSDGQLDFEEFKNMM 164

[Close]
BLAST of Cla005576 vs. TrEMBL
Match: A0A061FHR5_THECC (Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 7.7e-36
Identity = 90/162 (55.56%), Postives = 111/162 (68.52%), Query Frame = 1 

Query: 1   MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLIGKSKIDLNEFL 60
           MSPL+ +DLQRIFE +D NGDG VS+EELNWLL RIGV    E+L S +GK  +D NEFL
Sbjct: 29  MSPLSKNDLQRIFEKLDKNGDGLVSLEELNWLLVRIGVQFSLEELGSFVGKPCLDFNEFL 88

Query: 61  CLYESIREKN-EGEN-----RGNEEEI-----ESDLWNAFNVFDENRDGFISWDELRNVL 120
             Y+SI  +N +G+N      G E+ +     +SDL  AF VFD N DGFIS +EL++VL
Sbjct: 89  FFYDSISNQNDDGKNMEPAGSGEEDGLIQADEDSDLVKAFKVFDLNGDGFISCEELQSVL 148

Query: 121 VRLGLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMM 152
           VRLGLW DE     G  CR MI  +D +LDG +DF+EFKNMM
Sbjct: 149 VRLGLW-DE---SSGKDCRNMICFYDTNLDGMVDFEEFKNMM 186

[Close]
BLAST of Cla005576 vs. TrEMBL
Match: F6H0H4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01630 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-35
Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 1 

Query: 2   SPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLIGKSKIDLNEFLC 61
           S L+S DL RIF  +D NGDG VS+ ELNWLL R+GV    ++LESL+G + +D NEFL 
Sbjct: 4   SSLSSIDLHRIFHKLDRNGDGLVSLGELNWLLERVGVQYSLDELESLVGNTTLDFNEFLV 63

Query: 62  LYESIREKNEGENRGNEEEIE--------SDLWNAFNVFDENRDGFISWDELRNVLVRLG 121
            YESI  + +GE+   EEE++         DL  AF VFD N DGFI+ DEL++VL RLG
Sbjct: 64  FYESISTEKKGESEVEEEEVKEEEEEEDVGDLAKAFRVFDLNGDGFITCDELQSVLSRLG 123

Query: 122 LWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMM 152
           +W +   +GGGD CR MI  +D + DG LDF+EFKNMM
Sbjct: 124 MWEE---NGGGD-CRSMIKVYDTNSDGVLDFEEFKNMM 157

[Close]
BLAST of Cla005576 vs. TrEMBL
Match: A0A0D2PPZ5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G087100 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.0e-35
Identity = 91/169 (53.85%), Postives = 110/169 (65.09%), Query Frame = 1 

Query: 1   MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIG-VDLISEDLESLIGKSKIDLNEF 60
           MSPL+ +DLQR+FE +D NGDGFVS+EELNWLL RIG V    E+LE L+GK  ++L+EF
Sbjct: 34  MSPLSKTDLQRVFEKLDKNGDGFVSLEELNWLLQRIGSVQFSLEELEPLVGKPCLNLDEF 93

Query: 61  LCLYESI---------REKNEGEN---RGNEEEIESDLWNAFNVFDENRDGFISWDELRN 120
           L  YESI          E+ E E     G  EE +SDL  AF VFD N DGFIS +EL  
Sbjct: 94  LFFYESISNPPAHGGDEEEEEEEELVIHGGGEEEDSDLAKAFKVFDLNGDGFISCEELEY 153

Query: 121 VLVRLGLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMMNSSNS 157
           VL RLGLW ++     G  CR MI  +D + DG +DFQEFKNMM  S+S
Sbjct: 154 VLERLGLWDEK----SGKDCRSMIWYYDTNSDGMVDFQEFKNMMLHSSS 198

[Close]
BLAST of Cla005576 vs. NCBI nr
Match: gi|568837720|ref|XP_006472871.1| (PREDICTED: probable calcium-binding protein CML44 [Citrus sinensis])

HSP 1 Score: 162.9 bits (411), Expect = 4.5e-37
Identity = 92/170 (54.12%), Postives = 116/170 (68.24%), Query Frame = 1 

Query: 1   MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLIGKSKIDLNEFL 60
           M PL+++DLQRIF+ +D NGD  VS+EELNWLL RIGV L  E+LES +GKS +DLNEFL
Sbjct: 1   MCPLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFL 60

Query: 61  CLYESIREKN---------EGENRGNEEEIE-----SDLWNAFNVFDENRDGFISWDELR 120
             ++SI ++N         +GE  G++ E +     SDL  AFNVFD N DGFIS +EL+
Sbjct: 61  FFWKSISKQNNNKVDDHEVKGEINGDDNENDDDGEISDLLEAFNVFDLNGDGFISCEELQ 120

Query: 121 NVLVRLGLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMMNSSNS 157
           NVL RLGLW ++     G  C RMI  +D +LDG LDF+EFKNMM  S S
Sbjct: 121 NVLSRLGLWDEK----SGKDCTRMICMYDTNLDGVLDFEEFKNMMLLSKS 166

[Close]
BLAST of Cla005576 vs. NCBI nr
Match: gi|567883485|ref|XP_006434301.1| (hypothetical protein CICLE_v10002706mg [Citrus clementina])

HSP 1 Score: 162.2 bits (409), Expect = 7.6e-37
Identity = 91/170 (53.53%), Postives = 116/170 (68.24%), Query Frame = 1 

Query: 1   MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLIGKSKIDLNEFL 60
           M PL+++DLQRIF+ +D NGD  VS+EELNWLL RIGV L  E+LES +GKS +DLNEFL
Sbjct: 1   MCPLHTADLQRIFKQLDKNGDDQVSLEELNWLLERIGVRLSLEELESFVGKSSLDLNEFL 60

Query: 61  CLYESIREKN-------------EGENRGNEEEIE-SDLWNAFNVFDENRDGFISWDELR 120
             ++SI ++N              G++  N+++ E SDL  AFNVFD N DGFIS +EL+
Sbjct: 61  FFWKSISKQNNNKVDDHEVKDEINGDDNENDDDGEISDLLEAFNVFDLNGDGFISCEELQ 120

Query: 121 NVLVRLGLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMMNSSNS 157
           NVL RLGLW ++     G  C RMI  +D +LDG LDF+EFKNMM  S S
Sbjct: 121 NVLSRLGLWDEK----SGKDCTRMICMYDTNLDGVLDFEEFKNMMLLSKS 166

[Close]
BLAST of Cla005576 vs. NCBI nr
Match: gi|703133631|ref|XP_010105440.1| (putative calcium-binding protein CML44 [Morus notabilis])

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36
Identity = 88/165 (53.33%), Postives = 116/165 (70.30%), Query Frame = 1 

Query: 1   MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVD--LIS-EDLESLIGKSKIDLN 60
           M  L+++DL RIF+ +D NGDG VS++ELNWLL RIGVD  LIS  +LESL+GKS +  +
Sbjct: 1   MCSLSANDLNRIFKKLDKNGDGLVSVDELNWLLERIGVDIQLISLTELESLVGKSSLSFD 60

Query: 61  EFLCLYESIREKNEGENRGNE-----------EEIESDLWNAFNVFDENRDGFISWDELR 120
           EFL  Y+SI   N GE++G +           +  +SDL  AF VFD N DGFIS +EL+
Sbjct: 61  EFLFFYKSISNPNNGESKGGDIDQDQDHDHDHDGEDSDLVKAFKVFDINDDGFISCEELQ 120

Query: 121 NVLVRLGLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMM 152
           +VL+RLGL +++H   G D C+ MIGAFD + DG+LDF+EFKNMM
Sbjct: 121 SVLIRLGL-MEDHNSSGRDNCKSMIGAFDANSDGQLDFEEFKNMM 164

[Close]
BLAST of Cla005576 vs. NCBI nr
Match: gi|1009136861|ref|XP_015885754.1| (PREDICTED: probable calcium-binding protein CML44 [Ziziphus jujuba])

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-36
Identity = 88/165 (53.33%), Postives = 111/165 (67.27%), Query Frame = 1 

Query: 1   MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLIGKSKIDLNEFL 60
           M PLN+ DL RIFE +D NGDGFVS+EELNWLL +IGV     +LES +GK  +DLNEFL
Sbjct: 1   MYPLNTKDLHRIFEKLDKNGDGFVSLEELNWLLEKIGVQYSIAELESSVGKPCLDLNEFL 60

Query: 61  CLYESIREKNEGENRG--------------NEEEIESDLWNAFNVFDENRDGFISWDELR 120
              +SI E N  +++G              +  E + DL  AFNVFD N DGFIS +EL+
Sbjct: 61  LFCKSISENNNCKSKGGHGLDEDGLKDGDHDTNEEDDDLMKAFNVFDINGDGFISCEELK 120

Query: 121 NVLVRLGLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMM 152
           +VL+RLG ++DE C  G D C+ MI  FD +LDG+LDF+EFKNMM
Sbjct: 121 DVLMRLG-FLDETCSSGID-CKIMIHVFDTNLDGQLDFEEFKNMM 163

[Close]
BLAST of Cla005576 vs. NCBI nr
Match: gi|659081990|ref|XP_008441608.1| (PREDICTED: probable calcium-binding protein CML44 [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-35
Identity = 83/159 (52.20%), Postives = 110/159 (69.18%), Query Frame = 1 

Query: 1   MSPLNSSDLQRIFETIDTNGDGFVSMEELNWLLNRIGVDLISEDLESLIGKSKIDLNEFL 60
           MSP++S DL RIF+ +D N DG + ++EL WLL+RIG+ L  E+LES + K  +D +EFL
Sbjct: 1   MSPISSKDLHRIFKKLDKNCDGLLCLQELKWLLDRIGIQLTMEELESFLEKPSLDFDEFL 60

Query: 61  CLYESIREKNEGENRGN-----EEEIESD---LWNAFNVFDENRDGFISWDELRNVLVRL 120
             YESI ++N+GE +G      +++ E D   ++ AF VFD N DGFIS DEL NVLVRL
Sbjct: 61  FFYESISKQNKGECKGGVAGCVQDDHEDDTEIVYMAFKVFDMNGDGFISCDELENVLVRL 120

Query: 121 GLWVDEHCDGGGDYCRRMIGAFDMDLDGRLDFQEFKNMM 152
            LW     +   DYCR MI A+D +LDG+LDF+EFKNMM
Sbjct: 121 ELWDASRSE--VDYCRSMIQAYDTNLDGKLDFEEFKNMM 157

The following BLAST results are available for this feature:
BLAST of Cla005576 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML44_ARATH3.3e-2441.06Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=2 SV=... [more]
CML5_ARATH6.3e-2337.89Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2[more]
CML3_ARATH1.8e-2240.26Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1[more]
CML42_ARATH4.1e-2241.32Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1[more]
CML22_ORYSJ5.3e-2240.13Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 ... [more]
BLAST of Cla005576 vs. TrEMBL
Match NameE-valueIdentityDescription
V4TCZ3_9ROSI5.3e-3753.53Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002706mg PE=4 SV=1[more]
W9RRJ8_9ROSA9.1e-3753.33Putative calcium-binding protein CML44 OS=Morus notabilis GN=L484_003448 PE=4 SV... [more]
A0A061FHR5_THECC7.7e-3655.56Calcium-binding EF-hand family protein OS=Theobroma cacao GN=TCM_035222 PE=4 SV=... [more]
F6H0H4_VITVI1.0e-3553.16Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g01630 PE=4 SV=... [more]
A0A0D2PPZ5_GOSRA5.0e-3553.85Uncharacterized protein OS=Gossypium raimondii GN=B456_005G087100 PE=4 SV=1[more]
BLAST of Cla005576 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|568837720|ref|XP_006472871.1|4.5e-3754.12PREDICTED: probable calcium-binding protein CML44 [Citrus sinensis][more]
gi|567883485|ref|XP_006434301.1|7.6e-3753.53hypothetical protein CICLE_v10002706mg [Citrus clementina][more]
gi|703133631|ref|XP_010105440.1|1.3e-3653.33putative calcium-binding protein CML44 [Morus notabilis][more]
gi|1009136861|ref|XP_015885754.1|1.7e-3653.33PREDICTED: probable calcium-binding protein CML44 [Ziziphus jujuba][more]
gi|659081990|ref|XP_008441608.1|1.1e-3552.20PREDICTED: probable calcium-binding protein CML44 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005576Cla005576.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 9..29
score: 1.
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 87..151
score: 3.
IPR002048EF-hand domainSMARTSM00054efh_1coord: 84..112
score: 0.089coord: 8..36
score: 1.0E-4coord: 126..154
score: 0
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 4..39
score: 13.537coord: 122..157
score: 10.552coord: 80..115
score: 15
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 7..95
score: 6.0E-16coord: 96..151
score: 2.0
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 8..153
score: 4.88
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 93..105
score: -coord: 17..29
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 1..151
score: 2.4
NoneNo IPR availablePANTHERPTHR10891:SF530SUBFAMILY NOT NAMEDcoord: 1..151
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla005576Cla97C09G183290Watermelon (97103) v2wmwmbB042
Cla005576ClCG09G021840Watermelon (Charleston Gray)wcgwmB008
Cla005576CmaCh09G010490Cucurbita maxima (Rimu)cmawmB009
Cla005576CmoCh09G010550Cucurbita moschata (Rifu)cmowmB001
Cla005576Lsi02G017750Bottle gourd (USVL1VR-Ls)lsiwmB177
Cla005576Cp4.1LG06g08010Cucurbita pepo (Zucchini)cpewmB753
Cla005576Carg26621Silver-seed gourdcarwmB1034
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla005576Wax gourdwgowmB581
Cla005576Cucurbita maxima (Rimu)cmawmB410
Cla005576Cucurbita moschata (Rifu)cmowmB404
Cla005576Cucurbita pepo (Zucchini)cpewmB531
Cla005576Silver-seed gourdcarwmB0074