Cla005089 (gene) Watermelon (97103) v1

NameCla005089
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionIron--sulfur cluster insertion protein erpA 1 (AHRD V1 **** A3JDT2_9ALTE); contains Interpro domain(s) IPR016092 FeS cluster insertion
LocationChr3 : 3018047 .. 3019562 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCCCAGATTTCTTATTCAGCGGCTAACACCATACTTGGCAACACGTATCCGAGAGAACCAAAGGCTTCTTAGCTCTTCTGTTTCAGCTCATCAAGAAGCCTCTTCTTCGTTGATAACTCCATCTACGGGCACTGATACCATCCACATGACAGAAAATTGCATTCGGGTATCCCTACATTTTATGCAATCCTTTGTGTGCATGTACCATATTGATTAGAAATTAGTCATCTATTTCACTGTCGTCATTGTTTTAGTTCTTAATTTTCTGGACAATCCTCATTTTGTGCACTATTTGGGCCTATAATTTCTTGGTTTTAGGATGCTAATGAACTATTGCCTTTAATATTGGTAATTTGAGCGAAGGATATGAAAATTGGGAATTTTCTTGTTATCACTTCAAATTTGGGGATTTTCTTTGTCATATATGATGATTTAAAGCGAGGCTTAAGTTATAATGCCAAAACTGGAGAAGTATTCAGAATAATATGGTGCCAGTTGCAACAATTATCTTATTCTTAATTTTAAAAAAATTTTACTTGAAAGTTGGAATTTTTGAAAGGGACTGTGACTTGTAAACTTAGGAATGAACTCTTCTTAACTAGATGTATGATGTATTCTCTGTTACCAAAGGGCTAAATTGGTTGATACTCCTATTTATGTTATTGATAAAGGAATATATCAATAAGAGAGTCACAGGTCTTCATCTTCTAAAAGCATTCATTCTATCAGTTTTCTACATCATTTTTTCCCCTTTTCTGCTGCATGTAAGGGTTCAATGATGAAGTTTTTATGAAGAACGGTCTTGGTTTACTCTCTCCTGAGTCTAGACATTCCTTGCAGAGAATGAAAGAATTGCAAGAACCCACGGAAGAAAAGATGCTCCGCTTGAGTGTAGAAAATGGAGGATGTTCTGGATTTCAATATGTTTTCAATTTGGATGACAAAACCAATTCAGATGACAGGTCTATAAAATAGCTCCAATTCACTGCTTATTTTGGATTTTATCTCAAAGATTGCCAGTGATGTTTGGTTTCACTTTTTAAAACTTTACCCTTCTCTCTCCCTTCATGTTTGCAGGGTGTGTGAAAAGGAGGGAGTTAAATTGGTAGTTGATAATATCTCATATGATTTTGTAAAAGGAGCAACAATTGATTATGTTGAAGAGCTGATTCGTTCCGCTTTCATTGTGAGTAAAACCTATATCTCAGTATTTCTGGTTCACCATTTTTGCTTAGATATGCTTATTACTTTTATACCAGAGTGGCCCCTAACAAACCATAGTTATATGACATCTACAAACCCAATGGTCTGTGATCTGTACCAAGTAGTAAAATGCTCCAGAAGCCTCATTTTACGCCATATATTTTATGCATTCTTAAATCTTATCTCACAATAAAACTAGTGCTACTGCAGAAGTTGAACTCTTATATTATGCCTATGTGCAGGTGACCACAAATCCAAGTGCTGTTGGGGGCTGTAGTTGTAAAAGTTCTTTCATGGTGAAACAATAA

mRNA sequence

ATGGTCCCCAGATTTCTTATTCAGCGGCTAACACCATACTTGGCAACACGTATCCGAGAGAACCAAAGGCTTCTTAGCTCTTCTGTTTCAGCTCATCAAGAAGCCTCTTCTTCGTTGATAACTCCATCTACGGGCACTGATACCATCCACATGACAGAAAATTGCATTCGGAACGGTCTTGGTTTACTCTCTCCTGAGTCTAGACATTCCTTGCAGAGAATGAAAGAATTGCAAGAACCCACGGAAGAAAAGATGCTCCGCTTGAGTGTAGAAAATGGAGGATGTTCTGGATTTCAATATGTTTTCAATTTGGATGACAAAACCAATTCAGATGACAGGGTGTGTGAAAAGGAGGGAGTTAAATTGGTAGTTGATAATATCTCATATGATTTTGTAAAAGGAGCAACAATTGATTATGTTGAAGAGCTGATTCGTTCCGCTTTCATTGTGACCACAAATCCAAGTGCTGTTGGGGGCTGTAGTTGTAAAAGTTCTTTCATGGTGAAACAATAA

Coding sequence (CDS)

ATGGTCCCCAGATTTCTTATTCAGCGGCTAACACCATACTTGGCAACACGTATCCGAGAGAACCAAAGGCTTCTTAGCTCTTCTGTTTCAGCTCATCAAGAAGCCTCTTCTTCGTTGATAACTCCATCTACGGGCACTGATACCATCCACATGACAGAAAATTGCATTCGGAACGGTCTTGGTTTACTCTCTCCTGAGTCTAGACATTCCTTGCAGAGAATGAAAGAATTGCAAGAACCCACGGAAGAAAAGATGCTCCGCTTGAGTGTAGAAAATGGAGGATGTTCTGGATTTCAATATGTTTTCAATTTGGATGACAAAACCAATTCAGATGACAGGGTGTGTGAAAAGGAGGGAGTTAAATTGGTAGTTGATAATATCTCATATGATTTTGTAAAAGGAGCAACAATTGATTATGTTGAAGAGCTGATTCGTTCCGCTTTCATTGTGACCACAAATCCAAGTGCTGTTGGGGGCTGTAGTTGTAAAAGTTCTTTCATGGTGAAACAATAA

Protein sequence

MVPRFLIQRLTPYLATRIRENQRLLSSSVSAHQEASSSLITPSTGTDTIHMTENCIRNGLGLLSPESRHSLQRMKELQEPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ
BLAST of Cla005089 vs. Swiss-Prot
Match: ISAM2_ARATH (Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana GN=At5g03905 PE=2 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 3.2e-49
Identity = 110/171 (64.33%), Postives = 126/171 (73.68%), Query Frame = 1

Query: 4   RFLIQRLTPYLATRIRENQRLLS-SSVSAHQEASSSLITP--STGTDTIHMTENCIRNGL 63
           R L++R+ PYLA RIREN RLL+ SS SA +EASSS  +   S+  D +H+++NCIR   
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIR--- 62

Query: 64  GLLSPESRHSLQRMKELQ--EPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKE 123
                       RMKELQ  EP E+KMLRL VE GGCSGFQY F LD++TN DDRV EK 
Sbjct: 63  ------------RMKELQSSEP-EKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKN 122

Query: 124 GVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVK 170
           GVKLVVDN+SYD VKGATIDY EELIR+AF+V  NPSAVGGCSCKSSFMVK
Sbjct: 123 GVKLVVDNVSYDLVKGATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

BLAST of Cla005089 vs. Swiss-Prot
Match: ISCA2_BOVIN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.7e-27
Identity = 69/150 (46.00%), Postives = 86/150 (57.33%), Query Frame = 1

Query: 20  ENQRLLSSSVSAHQEASSSLITPSTGTDTIHMTENCIRNGLGLLSPESRHSLQRMKELQE 79
           +  RLL++S         S  +P  G   IH+T++C+               QR+ E+ E
Sbjct: 19  QRSRLLAASRGPRALREVSFSSPEAGEGQIHLTDSCV---------------QRLLEITE 78

Query: 80  PTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKEGVKLVVDNISYDFVKGATIDY 139
            +E   LRL VE GGCSGFQY F+LD   N DDRV EK G ++VVD+ S  FVKGA +D+
Sbjct: 79  GSE--FLRLEVEGGGCSGFQYKFSLDTVINPDDRVFEKGGARVVVDSDSLAFVKGAHVDF 138

Query: 140 VEELIRSAFIVTTNPSAVGGCSCKSSFMVK 170
            +ELIRS+F V  NP A  GCSC SSF VK
Sbjct: 139 SQELIRSSFQVLNNPQAQQGCSCGSSFSVK 151

BLAST of Cla005089 vs. Swiss-Prot
Match: ISCA2_PONAB (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 71/149 (47.65%), Postives = 91/149 (61.07%), Query Frame = 1

Query: 23  RLLSSSVS--AHQEASSSLITPSTGTDTIHMTENCIRNGLGLLSPESRHSLQRMKELQEP 82
           RLL++S+   A +EASSS  +P  G   I +T++C+               QR+ E+ E 
Sbjct: 24  RLLAASLGPQARREASSS--SPEAGEGQIRLTDSCV---------------QRLLEITEG 83

Query: 83  TEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKEGVKLVVDNISYDFVKGATIDYV 142
           +E   LRL VE GGCSGFQY F+LD   N DDRV E+ G ++VVD+ S  FVKGA +D+ 
Sbjct: 84  SE--FLRLQVEGGGCSGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFS 143

Query: 143 EELIRSAFIVTTNPSAVGGCSCKSSFMVK 170
           +ELIRS+F V  NP A  GCSC SSF +K
Sbjct: 144 QELIRSSFQVLNNPQAQQGCSCGSSFSIK 153

BLAST of Cla005089 vs. Swiss-Prot
Match: ISCA2_HUMAN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 71/149 (47.65%), Postives = 91/149 (61.07%), Query Frame = 1

Query: 23  RLLSSSVS--AHQEASSSLITPSTGTDTIHMTENCIRNGLGLLSPESRHSLQRMKELQEP 82
           RLL++S+   A +EASSS  +P  G   I +T++C+               QR+ E+ E 
Sbjct: 24  RLLTASLGPQARREASSS--SPEAGEGQIRLTDSCV---------------QRLLEITEG 83

Query: 83  TEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKEGVKLVVDNISYDFVKGATIDYV 142
           +E   LRL VE GGCSGFQY F+LD   N DDRV E+ G ++VVD+ S  FVKGA +D+ 
Sbjct: 84  SE--FLRLQVEGGGCSGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFS 143

Query: 143 EELIRSAFIVTTNPSAVGGCSCKSSFMVK 170
           +ELIRS+F V  NP A  GCSC SSF +K
Sbjct: 144 QELIRSSFQVLNNPQAQQGCSCGSSFSIK 153

BLAST of Cla005089 vs. Swiss-Prot
Match: ISCA2_MOUSE (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 PE=1 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-24
Identity = 65/136 (47.79%), Postives = 81/136 (59.56%), Query Frame = 1

Query: 34  EASSSLITPSTGTDTIHMTENCIRNGLGLLSPESRHSLQRMKELQEPTEEKMLRLSVENG 93
           E +SS+  P  G   I +T++C+               QR+ E+ E +E   LRL VE G
Sbjct: 37  ETTSSI--PEAGEGQIRLTDSCV---------------QRLLEITEGSE--FLRLQVEGG 96

Query: 94  GCSGFQYVFNLDDKTNSDDRVCEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTN 153
           GCSGFQY F+LD   N DDRV E+ G ++VVD+ S  FVKGA +D+ +ELIRS+F V  N
Sbjct: 97  GCSGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNN 153

Query: 154 PSAVGGCSCKSSFMVK 170
           P A  GCSC SSF VK
Sbjct: 157 PQAQQGCSCGSSFSVK 153

BLAST of Cla005089 vs. TrEMBL
Match: A0A0A0LXX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G496290 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 9.7e-61
Identity = 128/172 (74.42%), Postives = 138/172 (80.23%), Query Frame = 1

Query: 1   MVPRFLIQRLTPYLATRIRENQRLLSSSVSAHQEA--SSSLITPSTGTDTIHMTENCIRN 60
           M PR LIQR+TPYL  RI+ENQRLLSSS SA+QEA   S   +PS   DTIHMT++CIR 
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIR- 60

Query: 61  GLGLLSPESRHSLQRMKELQEPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKE 120
                         RMKELQ+P EEKMLRLSVE GGCSGFQYVFNLD KTN DDR+ EKE
Sbjct: 61  --------------RMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKE 120

Query: 121 GVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 171
           GVKLVVDNISYDFVKGATIDYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 GVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

BLAST of Cla005089 vs. TrEMBL
Match: A0A0A0LSN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G108280 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.1e-59
Identity = 123/149 (82.55%), Postives = 127/149 (85.23%), Query Frame = 1

Query: 1   MVPRFLIQRLTPYLATRIRENQRLLSSSVSAHQEASSSLITPSTGTDTIHMTENCIRNGL 60
           MVPRFLIQRLTPYL   IR+NQRLLSSSVSA+QEASSSLITPS G DTIHM++NCIR   
Sbjct: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIR--- 60

Query: 61  GLLSPESRHSLQRMKELQEPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKEGV 120
                       RMKELQEP EEKMLRLSVENGGCSGFQYVFNLDDKTN DDRVCEKEGV
Sbjct: 61  ------------RMKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGV 120

Query: 121 KLVVDNISYDFVKGATIDYVEELIRSAFI 150
           KLVVDNISYDFVKGATIDYVEELIRSAFI
Sbjct: 121 KLVVDNISYDFVKGATIDYVEELIRSAFI 134

BLAST of Cla005089 vs. TrEMBL
Match: A0A140B491_PRUPE (Fe-S cluster assembly transfer protein 19 OS=Prunus persica var. persica GN=ISA3 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.1e-51
Identity = 118/174 (67.82%), Postives = 130/174 (74.71%), Query Frame = 1

Query: 1   MVPRFLI-QRLTPYLATRIRENQRLLSSSV---SAHQEASSSLITPSTGTDTIHMTENCI 60
           M PR LI  RLTP+ A RIR+NQRLLSSS    SA +EASSS  + S   D + MT+ C+
Sbjct: 1   MAPRSLILHRLTPFFAARIRQNQRLLSSSFYSSSAVEEASSSSSSSSPSLDAVVMTDTCV 60

Query: 61  RNGLGLLSPESRHSLQRMKELQ-EPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVC 120
                          QRMK+LQ    E KMLRLSVE GGCSGFQYVF+LDDKT+ DDRV 
Sbjct: 61  ---------------QRMKQLQASEAEGKMLRLSVETGGCSGFQYVFDLDDKTHPDDRVF 120

Query: 121 EKEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVK 170
           EKEGVKLVVDN+SYDFVKGAT+DYVEELIRSAF VTTNPSAVGGCSCKSSFMVK
Sbjct: 121 EKEGVKLVVDNVSYDFVKGATVDYVEELIRSAFQVTTNPSAVGGCSCKSSFMVK 159

BLAST of Cla005089 vs. TrEMBL
Match: M5WAY8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012679mg PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.1e-51
Identity = 118/174 (67.82%), Postives = 130/174 (74.71%), Query Frame = 1

Query: 1   MVPRFLI-QRLTPYLATRIRENQRLLSSSV---SAHQEASSSLITPSTGTDTIHMTENCI 60
           M PR LI  RLTP+ A RIR+NQRLLSSS    SA +EASSS  + S   D + MT+ C+
Sbjct: 1   MAPRSLILHRLTPFFAARIRQNQRLLSSSFYSSSAVEEASSSSSSSSPSLDAVVMTDTCV 60

Query: 61  RNGLGLLSPESRHSLQRMKELQ-EPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVC 120
                          QRMK+LQ    E KMLRLSVE GGCSGFQYVF+LDDKT+ DDRV 
Sbjct: 61  ---------------QRMKQLQASEAEGKMLRLSVETGGCSGFQYVFDLDDKTHPDDRVF 120

Query: 121 EKEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVK 170
           EKEGVKLVVDN+SYDFVKGAT+DYVEELIRSAF VTTNPSAVGGCSCKSSFMVK
Sbjct: 121 EKEGVKLVVDNVSYDFVKGATVDYVEELIRSAFQVTTNPSAVGGCSCKSSFMVK 159

BLAST of Cla005089 vs. TrEMBL
Match: A0A0D2QDP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G158400 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 7.0e-51
Identity = 111/171 (64.91%), Postives = 130/171 (76.02%), Query Frame = 1

Query: 4   RFLIQRLTPYLATRIRENQRLLSSSVSAHQEA--SSSLITPSTGTDTIHMTENCIRNGLG 63
           R LIQR++P+   RI++N +LLSSS S+   A   +S  +PS   D +HMT+NCI+    
Sbjct: 11  RSLIQRISPFFIARIKQNHKLLSSSFSSSSSALHEASSESPSPSLDAVHMTDNCIK---- 70

Query: 64  LLSPESRHSLQRMKELQ--EPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKEG 123
                      RMKELQ  E + ++MLRLSVE GGCSGFQYVF+LDDKTN DDRV  +EG
Sbjct: 71  -----------RMKELQASEQSSDQMLRLSVETGGCSGFQYVFDLDDKTNPDDRVFVREG 130

Query: 124 VKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 171
           VKLVVD+ISYDFVKGATIDYVEELIRSAF+VTTNPSAVGGCSCKSSFMVKQ
Sbjct: 131 VKLVVDDISYDFVKGATIDYVEELIRSAFVVTTNPSAVGGCSCKSSFMVKQ 166

BLAST of Cla005089 vs. NCBI nr
Match: gi|449459108|ref|XP_004147288.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 6.0e-72
Identity = 144/170 (84.71%), Postives = 148/170 (87.06%), Query Frame = 1

Query: 1   MVPRFLIQRLTPYLATRIRENQRLLSSSVSAHQEASSSLITPSTGTDTIHMTENCIRNGL 60
           MVPRFLIQRLTPYL   IR+NQRLLSSSVSA+QEASSSLITPS G DTIHM++NCIR   
Sbjct: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIR--- 60

Query: 61  GLLSPESRHSLQRMKELQEPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKEGV 120
                       RMKELQEP EEKMLRLSVENGGCSGFQYVFNLDDKTN DDRVCEKEGV
Sbjct: 61  ------------RMKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGV 120

Query: 121 KLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 171
           KLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 KLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 155

BLAST of Cla005089 vs. NCBI nr
Match: gi|778659089|ref|XP_011653808.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 2.3e-63
Identity = 131/159 (82.39%), Postives = 135/159 (84.91%), Query Frame = 1

Query: 1   MVPRFLIQRLTPYLATRIRENQRLLSSSVSAHQEASSSLITPSTGTDTIHMTENCIRNGL 60
           MVPRFLIQRLTPYL   IR+NQRLLSSSVSA+QEASSSLITPS G DTIHM++NCIR   
Sbjct: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIR--- 60

Query: 61  GLLSPESRHSLQRMKELQEPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKEGV 120
                       RMKELQEP EEKMLRLSVENGGCSGFQYVFNLDDKTN DDRVCEKEGV
Sbjct: 61  ------------RMKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGV 120

Query: 121 KLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGG 160
           KLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPS V G
Sbjct: 121 KLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSDVEG 144

BLAST of Cla005089 vs. NCBI nr
Match: gi|449470384|ref|XP_004152897.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 1.4e-60
Identity = 128/172 (74.42%), Postives = 138/172 (80.23%), Query Frame = 1

Query: 1   MVPRFLIQRLTPYLATRIRENQRLLSSSVSAHQEA--SSSLITPSTGTDTIHMTENCIRN 60
           M PR LIQR+TPYL  RI+ENQRLLSSS SA+QEA   S   +PS   DTIHMT++CIR 
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIR- 60

Query: 61  GLGLLSPESRHSLQRMKELQEPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCEKE 120
                         RMKELQ+P EEKMLRLSVE GGCSGFQYVFNLD KTN DDR+ EKE
Sbjct: 61  --------------RMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKE 120

Query: 121 GVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 171
           GVKLVVDNISYDFVKGATIDYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 GVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

BLAST of Cla005089 vs. NCBI nr
Match: gi|659115367|ref|XP_008457521.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 239.6 bits (610), Expect = 4.1e-60
Identity = 127/174 (72.99%), Postives = 138/174 (79.31%), Query Frame = 1

Query: 1   MVPRFLIQRLTPYLATRIRENQRLLSSSVSAHQEASSSLITPSTG----TDTIHMTENCI 60
           M PR LIQR+TPYL  RI+ENQRLLSSS +A+QEASS   +PS       DTIHMT++CI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 60

Query: 61  RNGLGLLSPESRHSLQRMKELQEPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCE 120
           R               RMKELQ+P EEKMLRLSVE GGCSGFQYVFNLD KT  DDR+ E
Sbjct: 61  R---------------RMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYE 120

Query: 121 KEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 171
           KEGVKLVVDNISYDFVKGATIDYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 KEGVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

BLAST of Cla005089 vs. NCBI nr
Match: gi|659115364|ref|XP_008457520.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 239.6 bits (610), Expect = 4.1e-60
Identity = 127/174 (72.99%), Postives = 138/174 (79.31%), Query Frame = 1

Query: 1   MVPRFLIQRLTPYLATRIRENQRLLSSSVSAHQEASSSLITPSTG----TDTIHMTENCI 60
           M PR LIQR+TPYL  RI+ENQRLLSSS +A+QEASS   +PS       DTIHMT++CI
Sbjct: 134 MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 193

Query: 61  RNGLGLLSPESRHSLQRMKELQEPTEEKMLRLSVENGGCSGFQYVFNLDDKTNSDDRVCE 120
           R               RMKELQ+P EEKMLRLSVE GGCSGFQYVFNLD KT  DDR+ E
Sbjct: 194 R---------------RMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYE 253

Query: 121 KEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 171
           KEGVKLVVDNISYDFVKGATIDYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 254 KEGVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 292

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ISAM2_ARATH3.2e-4964.33Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana ... [more]
ISCA2_BOVIN7.7e-2746.00Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=... [more]
ISCA2_PONAB2.2e-2647.65Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 P... [more]
ISCA2_HUMAN2.2e-2647.65Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 P... [more]
ISCA2_MOUSE2.1e-2447.79Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 P... [more]
Match NameE-valueIdentityDescription
A0A0A0LXX8_CUCSA9.7e-6174.42Uncharacterized protein OS=Cucumis sativus GN=Csa_1G496290 PE=4 SV=1[more]
A0A0A0LSN2_CUCSA3.1e-5982.55Uncharacterized protein OS=Cucumis sativus GN=Csa_1G108280 PE=4 SV=1[more]
A0A140B491_PRUPE3.1e-5167.82Fe-S cluster assembly transfer protein 19 OS=Prunus persica var. persica GN=ISA3... [more]
M5WAY8_PRUPE3.1e-5167.82Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012679mg PE=4 SV=1[more]
A0A0D2QDP8_GOSRA7.0e-5164.91Uncharacterized protein OS=Gossypium raimondii GN=B456_002G158400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449459108|ref|XP_004147288.1|6.0e-7284.71PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [C... [more]
gi|778659089|ref|XP_011653808.1|2.3e-6382.39PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [C... [more]
gi|449470384|ref|XP_004152897.1|1.4e-6074.42PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sati... [more]
gi|659115367|ref|XP_008457521.1|4.1e-6072.99PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [C... [more]
gi|659115364|ref|XP_008457520.1|4.1e-6072.99PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [C... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000361FeS_biogenesis
IPR016092FeS_cluster_insertion
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0051536iron-sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0097428 protein maturation by iron-sulfur cluster transfer
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0005198 structural molecule activity
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0005506 iron ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla005089Cla005089.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000361FeS cluster biogenesisGENE3DG3DSA:2.60.300.12coord: 70..154
score: 1.2
IPR000361FeS cluster biogenesisPFAMPF01521Fe-S_biosyncoord: 72..163
score: 7.6
IPR000361FeS cluster biogenesisunknownSSF89360HesB-like domaincoord: 71..156
score: 1.26
IPR016092FeS cluster insertion proteinTIGRFAMsTIGR00049TIGR00049coord: 70..168
score: 5.7
NoneNo IPR availablePANTHERPTHR10072IRON-SULFUR CLUSTER ASSEMBLY PROTEINcoord: 3..56
score: 1.2E-57coord: 72..169
score: 1.2
NoneNo IPR availablePANTHERPTHR10072:SF46IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIALcoord: 3..56
score: 1.2E-57coord: 72..169
score: 1.2