CSPI01G13300 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G13300
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Iron-sulfur cluster
Location	Chr1 : 8776858 .. 8784520 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCTGGAGAGGGTAGTTATCACAATTTCCCTTTGCAACTTCATTTCCCCAAATCATTATTTACCCAACTCTCCCTCTCTTCCTTCTTCCCTGATTCAAACCCAACCTTCCTCTCCTCTCTCTCTCTCTGTCTAATTTCCATCTTTCTTTCCATATTATCTCTTCCTTCTTCTTTGTTTGATTTCACCAGTCGTTGCTGCATCCTCTCCCTTTGGGAAGTGGGGAAGAATGTGTGGAGCACAATGAACCACGAGCCCACCAAAGTTTCGGCAGCAGTGACCATTTTTCAAGTTAAATTATTGATGCTCACAACTTGCATTGGGAAAGAGGTGAATTCCTTATGTGCTACTGTTTGCAGCGCCATCAGCATGTAAGGACCTTCTTCTTGTTTCTTCTCGTTCTATGTATACCTTTTTTTTTTTCTTGTTTTTCCTTCTTTTGCTTACGATTTCTCGAGTACTAATTGACGGAAAAGGATGAATCCATAGAGAAGAAAGGAACTCTGACCTTTATAACTTGTTTTTCTTTAGGTGGTTATTACCAATAGCTTTACCTTCTTTGTAAATTGAGAATTGCTCAGATACTGAACTGGTATTTCTAAAAGGGATAGGGATGGGGATCAAGACCTAGATTGAAGGAGAATGAACTACAAGTTCGAACATACTAACTGAACTGGTATTACTAAAATGGATAGGGGACTGAGTCCAGTGCCCTTCACCCCCTTTCAAACTTATAGTGTTATTCCATAGTCTAGAATTCTAATGTTCCTTTTACATACCCCAAAATCCTGTTTAGGGCTTGCCATCTGTGCGTTTATGTTTTTGATGAAAAAACCATTCTTTTTAATGGAAGAATACTACGGGATTATATTACAAAGAGAAATCCTCCACCAAAAAGAGCCAATCTCAAAAACAGGGTTCCAATATGGAAAATTAACACCTAAAGTATAATTACAAAAAATGTGAAAAAAACCGAAGTCCAAATGGGAGACTCGAACATAGAAAGTGCCCTTCCTCTTGAAAGATGGGTGAAGAAGAATCTCTACGATCATAGAGCTACACTCCCTAGACCTGGCAAGGAATCTTAAAAACAATTCCACACCAAAAAAGCACAGTCACAGCTCCCAAACATGTGGTCGAGATGCGAGATGTGATATGTTGTAGATTTGGACTTGGTTGACTTAAGGGCTTATATGGTTTGGGTTCATTTGAGATAGATACTGTAGAGCATTTGAATTAAGATTGGTGAAGTCAACTCCCTGTATACCGTTAAAGAAGTCAACTTCTTCCTAGACATGAGTGAAAACATTCAGTGACAAGTCTAACTATATATCTCATTGAAAACACATTTGGAGTAAGATTAAGCCTGAGAGTTCACTTGTTTCTCTCTTAATTAATATCTGTAGGTACAACAAGAGTCTGGTTAATTTCTATTAAAGCCACGAGTACAAGCATCGACCCTCTTTGCCTTTCTCCTATTCATATGTGCCATTGTTTCTTCAAAAAACTTTCCTTTATTATCTTAAACATTCAAACTGTTTTGGTGGGCAAGAATTATGGATCTAGGTCACACTAGTTATTTGTGCACTTTCACTCACTAGTTCAATAGGTCTGCATCAGCCAATAATTTCACTGTAGCAATGTAATTAGCCATTTTTAGCATATTCCCCTCGCCTGAAGGAAGATAAGTAGTTGATTGGTTCTTGCTTGTTTGCTGAACCATCATATGGCTTTCAAATGTTTCTAGATGTAGTGTGTTTTATAACATCACTTGCAACCTATTGCTCTATTGAGCCAACTATCTACTTGTTGGGTAATGTAGGGGCCATTAATAATACTCAAGTTTAAGTTTTTTTCAAAATTACATTTTTACACCAAAAGGAACAATATTTTTAAAGCTAAAGGGGCAGTGAAGCGCATAGTCTTCTGGGTCTTCACAGGTGAAAAAAAAGCATGGACTTTTTTGTTGTGAGGTGCACAATATTTAGAAGTACTAAATAAAGAAGAAAAAGCATAGTTGAAGTGAACATATGGGAAAAAACCCCTCAACACAAGATATTTGGAATTTAGCTTATTAAGTTTGGTTTTTTTAGTTAATAAAGAAGGGAGCACCCTAATTATTACTCTTTTAAAATATAATGGAAAATGCCCAAGGACCAGGGCTTTGAGCCTTAGAGTTTCAAAAACAACTGTTGGTAAGACCTTATTTTTCTTATTTTTTAACATACCTATGCCTAGGCATGTGCTTGGAGGGCTTTTTAAAACAGTAAAAAGGCACACTCAAAAAGTTTGTGGAAGGATATTTCCATCAAGATCCCTTTCTTCATGTCGTCAATGTGTTGTGGGGCAGGGAAAGGAAACATATTTCTAAAGGATCAGTGGGTGGGGGATAAAACCCTTTACACATCGATTCCTTATCTTTATCATTTGACCTTCTTAAAAAATTCCTTTGTGGCCAATGTCTTGGTTTGGTCTAGGATCTCCTTTCCATTTCGTTCAGTTTCCATCATCCTTTGTTGGATAGGGAAAGTGTCACGACCCTCCTATCTTTGGTAGGAAAGTTTGATTTTAGGATCAAAATAAGAGATGTTCGTATTTTGAGTCCCAACCCTTCTAGAGGTTTCACTTACAATTATTTTTTTCGTTGTTTGTTGGACCCTTCTCTAGCAAGGGAATACATTTTCCTGGCTCTTTGAAAAATTAAGATATCAAAGAAGGTTAAGTTCTTTGTATGACCAGGTTTTGCATAATTGGATTAACACTTTGGATCGGGTCTCGAGAATTTGGCCTTCAATGATAGACCTATTTTGTTGTATCCTCTATTGGAAGAAGGAGAAAGACTTGGATTATATCTTATGGAGTTTGTGGCTATGCACGCTTCATGTGGAATTTCTTCATGGACAGTGTTTGATTTACAATTTGGCATCATATAGTTTGTTTGGGGATGCTCTATGACTTTCTTTTCCATCTGTCTTTCAAGGATGGCTGTTTCTTGTGACTTTTTACGCAGGCTATGAGTGCTATTGTGAAATTTGTGGGTAGAGAGAGGAACAATAGAGTGTTTAGAAGGTTGGAAAGGGATCCTAAAGATGTTTGGTCCCTTTTTGTATCCATGTTGCCCTTTGGGTTTTGGTGACAGGTTGTCTTATTTTACAGCTACAGAGGCCTTTTCTTATTAGCCTCCTTTTTGTGGCTTTGTTTACTAGGATGCCTTCTTCTTCTTCTTTTCGAATGTTTGTTTCTCCATAAAGGGATAATCTAGCTCCATAATCTTGTATAAATGCAAGCGTCTCTTCAGATTTGCCCTGCCCCTCCCTCTCAAAATCTCCCGAAATCCATAGATCAACAACAAAATAGAAACATAACCCATTGTTAGAAATCCACAAGACAATGGCCTTGTGCAATACATCATTCTTTTGATTGAGATTTTACAATGTTCGGGTTTGGTTTCTAGCTGCATTTTCCCCCTCCTGAATGTTGTGAATTCCATTTTGACCTCTCCCACTGTTGATTATTACTTTACTTTGAAATTGAAAATACGCTAAAAGTATTAAATCCAGCGAGAGTTGGATCTTCCTTTCAAATGGATTTGGATGTTTGGTTTTGGAAATCCTTGCTGGTACATTGTTTATGGGCAAGGCTAAGATTCATTGGAATTTAACTGTTAGTGCTCTTCTTGAGCTGACTTGGAAGGGGAGAGAAATCACAGATTCACAGACTTTTTGTAGACGATGGTTTTAGAGAAATTCTTTTGTTGGTACTGCCTTCTCATGATTATCTCTTTTCACTTCTTGTCATGGTTTTCTTTTCTCTTGTTGAAAGACTCTTTTGCTTAGTGTTTCTGTTGGGAAAGAGTTTTAGGTCTAACAATTGTAGTTATTTGCATGTTATGTAAGTAGGTTTTTTCTACTTGAGTTTGTACATTAAGTTTTCATGTGCATGGGACTCATTTTCTTTTAGTCTCCCATTGGGGTTATTATCTTCTATTTTGTTTTTATCTAATTGGGAGATCTTATAAATTGCTAGCATTTTGGGACTTCTTCCCTCTGTTTTGATATTTTATTTATCGTTGAAATTTCATTATCCCCCTTTGGCGGGGAAAAGGATCTAACAACGTAGTGACCTAATGCGGTTAAAGTTTCATAGATATCATCGTTTTTTTATATTAATTTTATACGAGCCCTTGAGAATTTAGTTTCTCGTTCAATTTCATATCCATTTGATTTCAACTGGATTATAATTGAAACTGCTTTCCTAGAAAATATTCCAATGCTGCAGATTAAAGTTGCTAGACTCATCTGTTTTGTTTGAATATTGCTGCCCGAACACTCTGATTGAAATTATCTAGGCCAAGGACACTTACATTTGGGAGGATCGGTCAGTGGAGGAGAATCCCCTTTGTTCTGTTTTTCCGCATCTGTATCATCTTTCCTCATCCAAAAACTGTCCTATCTCGGATCTTTTGGTGAGATTTGAGAATTCTGTTAGACCACCCATCATACATCAATACAGTAGGAGAAAGAATAGGAAAGAGAAGCAGGAGAAGGAGTTAGTTATTTAACCGCATGTGGGGACCACAATGAGTGGAACGACACATGAAACAGGGGGACCACTGTAGGTGGGGAGTGAATATAAATAAGGGAGTGAAAGAGAGAATGAGGAGCTTTTCTTTTTGGTGAAGTTTCTTTCTCGCCGAGATGTGCGCGGTTAATTGGGACACTTGGGGCGAGAGGAATGATAGGGTGTTTAAGGGTAGAGAGAAGGGGCATACTGAGATTTGGTTTTTGGTTAGATTTCACGTGTCTCTTTGGACTTCGGTTTCAGAAAACTTTTGTAACTATTCTATAGACAATATTTTACTTAGTAGGTTTTGTGGGGCTGGTTTTTTTTTATGCCATTGTATTCTTTCATTTTTTTCTCAACGAAAGTTGTTTTGACCAAAAAAAATCTAGGCCAATTCGAAATCTTGGATTTCCATTTTTGTTTCAAACTTTTAATTGACCTGGATATTGAAGAAGCATTATCCTCATTAGTCTTTAGTCATATTAATGCCTTTAGGATTTGGTTTTGCCACAGATAAGGATCAAATTGAAGAGGAGAGAGTGAAGAGATGGTTCCCAGATTTCTAATTCAGCGGCTAACACCATATTTGGGAGCACATATCCGAAAGAACCAAAGGCTTCTTAGCTCTTCTGTTTCAGCCTATCAAGAAGCCTCTTCTTCGTTGATAACTCCATCTGCGGGCATTGATACAATTCACATGTCAGATAACTGCATTCGGGTATCCCTACTCTTTATGTAATCCTTTTTGTGCATTTACCATATGGATTTAAAATTATTCATCTATTTCACTGTCATTATTGTTTTAGTTTTTGATTTTCTGGACTATCCTCATTTTGTGCATTATTTGGACCTATAATTTCTTGGTTGTAGGATGTTAATGAACTATTGCCTTGAACACGATTAAAATATGAGTGAAGAATTTGAGATTTGGGCATTTTCTTGTTATCGCTTCAAATTTGGGCATTTGCTTTGTCATACGTGATGCCCTAAAGCGAGGCTTAATTTATGATACCAAAACTGAAGTATTAAGAAGAATATATGGTGCCAGTTATAATAATTATCTTATTCTTAATTTTTTAAAGAACTTTAAATAAATGAAAGGAAGTGAGACTTATAAACTTAGGAATGAACTCTTCACAACTAGATGTATGATGTATTATCTGTTACCAAAGGGCTAAATTAGTTAATACTCGCAATTATGTTATTCATCACGGTTGACATAGTCCTTGATCTTCATCCTTTAAAAGCATTCTTACCATCATTTTTCTACACATTTTTTTCCCTGCTGCACTAAAGTAAGTTTTGAATAATGCTGAGTATTGAGATGCCCTTGCAGAGAATGAAAGAATTGCAAGAACCCATGGAAGAAAAGATGCTTCGGTTGAGTGTAGAAAATGGGGGATGTTCTGGGTTTCAATATGTTTTCAATTTGGATGACAAAACCAATCCAGATGACAGGTCTATTAAATAGCTTATACTCACTTCTTAATTTGGATTTTCACCTAAAGATTGCCAATGATGTTTGCTTTCACTCTTTAAAACTTCATCCTTTTCCCTCCTTTCATGTTTGCAGGGTGTGTGAGAAGGAAGGAGTTAAATTGGTAGTTGATAACATCTCATATGATTTTGTAAAAGGAGCAACAATTGATTATGTTGAGGAGCTGATTCGTTCCGCTTTCATTGTGAGTAAAACCTATGTCTCACCATTTGCTGGATCACCATTGTTGTTTAGATATGTTTATTTTCGTTTCAAAATGTTACACTTTTAGTTAATAATTTTTACTTCGATTTTAGTTTAGCCTTTAGATTTCAAAATATTACGCTTTTAGACCTTAAAATTTGAATTTTATTTTAATCTAGTAACAAGTTTCAAGATTTACACTTTTTAACCTCAATTTTTAAATAACATATTCACTTCAATCTTTATCTTTAATATCTAAAATTAATTATGAAGTGAAGTTCCAAAATTAACTTCAACATTGATGAAGAAATAATGAAACATAGTCCATTATAGTTTTCTTAATTATTTTTACTTAGTCTTTAAAAGTGAGTATTGAGTGAAAATTGAGATTGTAAATGTAAATCTTGAGTTTAGAGACCAAATTGAAACAAAACTCAAACATTTATATCAAACGGTAACATTTTGAAATCTAAGGATTAAATTGAAATCAAACTCAAAACTTAATCATTAAAGCTTTTGTCCATTTAGTTTCTTTTTTTAAAATCAAGTTTATTAACATTGCTTCCTTTTATTACTTTCCATGGTTTGTTGTCTCAAAATCATAGCCAAAATCTGAAAACTAAAAAGGTAAATTTCAAACGCTCGTTTTTATTTCTAGAAATTGACTAAAGAACTTTATGGGGCGTTTGAGACAAGGTGACCACAAATCCAAGTGATGTTGGAGGGAGGCTATGGTTCTTAAAGTACTTCTAAATTTTGCTATAACATATAAATAGTTTAGTCTATTTTTTTATACGTAAAATGCTCCAAACAAAAAAAAAAACTAAATAGTTACTAAACGACGTTTAAAAGGGTAATATTTTAAAATCTAAAAGTTGAACCGAAACTAAATCTAAAACCTGGAGACCAAAAAACTCATATCTCATTTTACATCATATATTTTATGCATTCTTATAAATCCAAAACTTGGAGGCCAAATAACATATATATCTCATTTTACATCATATATTTGATCCATTCTTATTTCTTATTTCACAACAAAAGTAGTGCTAATGCAGAAGTTGAATTCTTGTAATATGCCATATGCAGGTGACCACAAATCCAAGTGCTGTTGGTGGCTGTAGTTGTAAAAGTTCTTTTATGGTGAAACAATAATCATCACAAAGCTCTTCTCAGGAAGGCATAGAAGCAATAACCAAAACTCTGACTTGAAGATATAATGGATTTGTTTATCACTTGGTTGGTTCAGTTGATAAGGCTTTTTGTCCATTCCGATAATTTTTGTATCATGTGCCGCTTTTATATTACTTGAGAACTTCATACTTCATTCTTTGTTGCACTTAATCATGATGGATTTTATTACAAGAGAGTTGCATTGGATAATAAAATATACTTGTATATTTGCAAGTCTTTTAAAA

mRNA sequence

ATGGTTCCCAGATTTCTAATTCAGCGGCTAACACCATATTTGGGAGCACATATCCGAAAGAACCAAAGGCTTCTTAGCTCTTCTGTTTCAGCCTATCAAGAAGCCTCTTCTTCGTTGATAACTCCATCTGCGGGCATTGATACAATTCACATGTCAGATAACTGCATTCGGAGAATGAAAGAATTGCAAGAACCCATGGAAGAAAAGATGCTTCGGTTGAGTGTAGAAAATGGGGGATGTTCTGGGTTTCAATATGTTTTCAATTTGGATGACAAAACCAATCCAGATGACAGGGTGTGTGAGAAGGAAGGAGTTAAATTGGTAGTTGATAACATCTCATATGATTTTGTAAAAGGAGCAACAATTGATTATGTTGAGGAGCTGATTCGTTCCGCTTTCATTCCAAAATCTGAAAACTAA

Coding sequence (CDS)

ATGGTTCCCAGATTTCTAATTCAGCGGCTAACACCATATTTGGGAGCACATATCCGAAAGAACCAAAGGCTTCTTAGCTCTTCTGTTTCAGCCTATCAAGAAGCCTCTTCTTCGTTGATAACTCCATCTGCGGGCATTGATACAATTCACATGTCAGATAACTGCATTCGGAGAATGAAAGAATTGCAAGAACCCATGGAAGAAAAGATGCTTCGGTTGAGTGTAGAAAATGGGGGATGTTCTGGGTTTCAATATGTTTTCAATTTGGATGACAAAACCAATCCAGATGACAGGGTGTGTGAGAAGGAAGGAGTTAAATTGGTAGTTGATAACATCTCATATGATTTTGTAAAAGGAGCAACAATTGATTATGTTGAGGAGCTGATTCGTTCCGCTTTCATTCCAAAATCTGAAAACTAA

Homology

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BLAST of CSPI01G13300 vs. Swiss-Prot
Match: ISAM2_ARATH (Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana GN=At5g03905 PE=2 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 2.2e-52
Identity = 110/156 (70.51%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 4   RFLIQRLTPYLGAHIRKNQRLLS-SSVSAYQEASSSLITP--SAGIDTIHMSDNCIRRMK 63
           R L++R+ PYL   IR+N RLL+ SS SA +EASSS  +   S+  D +H+SDNCIRRMK
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMK 62

Query: 64  ELQ--EPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVK 123
           ELQ  EP E+KMLRL VE GGCSGFQY F LD++TNPDDRV EK GVKLVVDN+SYD VK
Sbjct: 63  ELQSSEP-EKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLVK 122

Query: 124 GATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVK 155
           GATIDY EELIR+AF+V  NPSAVGGCSCKSSFMVK
Sbjct: 123 GATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

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BLAST of CSPI01G13300 vs. Swiss-Prot
Match: ISCA2_BOVIN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 6.8e-30
Identity = 70/135 (51.85%), Postives = 89/135 (65.93%), Query Frame = 1


Query: 20  KNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMKELQEPMEEKMLRLSVENGG 79
           +  RLL++S         S  +P AG   IH++D+C++R+ E+ E  E   LRL VE GG
Sbjct: 19  QRSRLLAASRGPRALREVSFSSPEAGEGQIHLTDSCVQRLLEITEGSE--FLRLEVEGGG 78

Query: 80  CSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNP 139
           CSGFQY F+LD   NPDDRV EK G ++VVD+ S  FVKGA +D+ +ELIRS+F V  NP
Sbjct: 79  CSGFQYKFSLDTVINPDDRVFEKGGARVVVDSDSLAFVKGAHVDFSQELIRSSFQVLNNP 138

Query: 140 SAVGGCSCKSSFMVK 155
            A  GCSC SSF VK
Sbjct: 139 QAQQGCSCGSSFSVK 151

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BLAST of CSPI01G13300 vs. Swiss-Prot
Match: ISCA2_PONAB (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 72/134 (53.73%), Postives = 94/134 (70.15%), Query Frame = 1


Query: 23  RLLSSSVS--AYQEASSSLITPSAGIDTIHMSDNCIRRMKELQEPMEEKMLRLSVENGGC 82
           RLL++S+   A +EASSS  +P AG   I ++D+C++R+ E+ E  E   LRL VE GGC
Sbjct: 24  RLLAASLGPQARREASSS--SPEAGEGQIRLTDSCVQRLLEITEGSE--FLRLQVEGGGC 83

Query: 83  SGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPS 142
           SGFQY F+LD   NPDDRV E+ G ++VVD+ S  FVKGA +D+ +ELIRS+F V  NP 
Sbjct: 84  SGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQ 143

Query: 143 AVGGCSCKSSFMVK 155
           A  GCSC SSF +K
Sbjct: 144 AQQGCSCGSSFSIK 153

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BLAST of CSPI01G13300 vs. Swiss-Prot
Match: ISCA2_HUMAN (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 PE=1 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 72/134 (53.73%), Postives = 94/134 (70.15%), Query Frame = 1


Query: 23  RLLSSSVS--AYQEASSSLITPSAGIDTIHMSDNCIRRMKELQEPMEEKMLRLSVENGGC 82
           RLL++S+   A +EASSS  +P AG   I ++D+C++R+ E+ E  E   LRL VE GGC
Sbjct: 24  RLLTASLGPQARREASSS--SPEAGEGQIRLTDSCVQRLLEITEGSE--FLRLQVEGGGC 83

Query: 83  SGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPS 142
           SGFQY F+LD   NPDDRV E+ G ++VVD+ S  FVKGA +D+ +ELIRS+F V  NP 
Sbjct: 84  SGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQ 143

Query: 143 AVGGCSCKSSFMVK 155
           A  GCSC SSF +K
Sbjct: 144 AQQGCSCGSSFSIK 153

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BLAST of CSPI01G13300 vs. Swiss-Prot
Match: ISCA2_MOUSE (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 6.4e-28
Identity = 67/136 (49.26%), Postives = 88/136 (64.71%), Query Frame = 1


Query: 19  RKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMKELQEPMEEKMLRLSVENG 78
           R++ RLL+          ++   P AG   I ++D+C++R+ E+ E  E   LRL VE G
Sbjct: 20  RRSGRLLAVFPRLLTRWETTSSIPEAGEGQIRLTDSCVQRLLEITEGSE--FLRLQVEGG 79

Query: 79  GCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTN 138
           GCSGFQY F+LD   NPDDRV E+ G ++VVD+ S  FVKGA +D+ +ELIRS+F V  N
Sbjct: 80  GCSGFQYKFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNN 139

Query: 139 PSAVGGCSCKSSFMVK 155
           P A  GCSC SSF VK
Sbjct: 140 PQAQQGCSCGSSFSVK 153

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BLAST of CSPI01G13300 vs. TrEMBL
Match: A0A0A0LSN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G108280 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-68
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1


Query: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK 60
           MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK
Sbjct: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK 60

Query: 61  ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA 120
           ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA
Sbjct: 61  ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA 120

Query: 121 TIDYVEELIRSAFI 135
           TIDYVEELIRSAFI
Sbjct: 121 TIDYVEELIRSAFI 134

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BLAST of CSPI01G13300 vs. TrEMBL
Match: A0A0A0LXX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G496290 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.6e-65
Identity = 130/157 (82.80%), Postives = 141/157 (89.81%), Query Frame = 1


Query: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEAS--SSLITPSAGIDTIHMSDNCIRR 60
           M PR LIQR+TPYL A I++NQRLLSSS SAYQEA   S   +PSA +DTIHM+D+CIRR
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRR 60

Query: 61  MKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVK 120
           MKELQ+P EEKMLRLSVE GGCSGFQYVFNLD KTNPDDR+ EKEGVKLVVDNISYDFVK
Sbjct: 61  MKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVK 120

Query: 121 GATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 156
           GATIDYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 GATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

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BLAST of CSPI01G13300 vs. TrEMBL
Match: A0A0D2QDP8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G158400 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-54
Identity = 115/158 (72.78%), Postives = 132/158 (83.54%), Query Frame = 1


Query: 4   RFLIQRLTPYLGAHIRKNQRLLSSSVS----AYQEASSSLITPSAGIDTIHMSDNCIRRM 63
           R LIQR++P+  A I++N +LLSSS S    A  EASS   +PS  +D +HM+DNCI+RM
Sbjct: 11  RSLIQRISPFFIARIKQNHKLLSSSFSSSSSALHEASSE--SPSPSLDAVHMTDNCIKRM 70

Query: 64  KELQ--EPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFV 123
           KELQ  E   ++MLRLSVE GGCSGFQYVF+LDDKTNPDDRV  +EGVKLVVD+ISYDFV
Sbjct: 71  KELQASEQSSDQMLRLSVETGGCSGFQYVFDLDDKTNPDDRVFVREGVKLVVDDISYDFV 130

Query: 124 KGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 156
           KGATIDYVEELIRSAF+VTTNPSAVGGCSCKSSFMVKQ
Sbjct: 131 KGATIDYVEELIRSAFVVTTNPSAVGGCSCKSSFMVKQ 166

[Close]

BLAST of CSPI01G13300 vs. TrEMBL
Match: A0A0B0MTF5_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_28491 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-54
Identity = 115/159 (72.33%), Postives = 132/159 (83.02%), Query Frame = 1


Query: 4   RFLIQRLTPYLGAHIRKNQRLLSSSVS----AYQEASSSLITPSAGIDTIHMSDNCIRRM 63
           R LIQR++P+  A I++N +LLSSS S    A  EASS   +PS  +D +HM+DNCI+RM
Sbjct: 11  RSLIQRISPFFIARIKQNHKLLSSSFSSSSSALHEASSE--SPSPSLDAVHMTDNCIKRM 70

Query: 64  KELQ---EPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDF 123
           KELQ   +  + KMLRLSVE GGCSGFQYVF+LDDKTNPDDRV  +EGVKLVVD+ISYDF
Sbjct: 71  KELQASEQSSDHKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVFVREGVKLVVDDISYDF 130

Query: 124 VKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 156
           VKGATIDYVEELIRSAF+VTTNPSAVGGCSCKSSFMVKQ
Sbjct: 131 VKGATIDYVEELIRSAFVVTTNPSAVGGCSCKSSFMVKQ 167

[Close]

BLAST of CSPI01G13300 vs. TrEMBL
Match: A0A140B491_PRUPE (Fe-S cluster assembly transfer protein 19 OS=Prunus persica var. persica GN=ISA3 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.8e-54
Identity = 117/159 (73.58%), Postives = 131/159 (82.39%), Query Frame = 1


Query: 1   MVPRFLI-QRLTPYLGAHIRKNQRLLSSSV---SAYQEASSSLITPSAGIDTIHMSDNCI 60
           M PR LI  RLTP+  A IR+NQRLLSSS    SA +EASSS  + S  +D + M+D C+
Sbjct: 1   MAPRSLILHRLTPFFAARIRQNQRLLSSSFYSSSAVEEASSSSSSSSPSLDAVVMTDTCV 60

Query: 61  RRMKELQ-EPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYD 120
           +RMK+LQ    E KMLRLSVE GGCSGFQYVF+LDDKT+PDDRV EKEGVKLVVDN+SYD
Sbjct: 61  QRMKQLQASEAEGKMLRLSVETGGCSGFQYVFDLDDKTHPDDRVFEKEGVKLVVDNVSYD 120

Query: 121 FVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVK 155
           FVKGAT+DYVEELIRSAF VTTNPSAVGGCSCKSSFMVK
Sbjct: 121 FVKGATVDYVEELIRSAFQVTTNPSAVGGCSCKSSFMVK 159

[Close]

BLAST of CSPI01G13300 vs. TAIR10
Match: AT5G03905.1 (AT5G03905.1 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-53
Identity = 110/156 (70.51%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 4   RFLIQRLTPYLGAHIRKNQRLLS-SSVSAYQEASSSLITP--SAGIDTIHMSDNCIRRMK 63
           R L++R+ PYL   IR+N RLL+ SS SA +EASSS  +   S+  D +H+SDNCIRRMK
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMK 62

Query: 64  ELQ--EPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVK 123
           ELQ  EP E+KMLRL VE GGCSGFQY F LD++TNPDDRV EK GVKLVVDN+SYD VK
Sbjct: 63  ELQSSEP-EKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLVK 122

Query: 124 GATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVK 155
           GATIDY EELIR+AF+V  NPSAVGGCSCKSSFMVK
Sbjct: 123 GATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

[Close]

BLAST of CSPI01G13300 vs. TAIR10
Match: AT2G36260.1 (AT2G36260.1 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.8e-12
Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 1


Query: 51  MSDNCIRRMKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVD 110
           +SD    R+++L +  ++  LRL+VE  GC+G  YV N   +    D V E++GVK++VD
Sbjct: 8   LSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKILVD 67

Query: 111 NISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSF 152
             +   V G  +D+V++ +RS F V  NP+A   C C  SF
Sbjct: 68  PKAVMHVIGTEMDFVDDKLRSEF-VFVNPNAT-KCGCGESF 106

[Close]

BLAST of CSPI01G13300 vs. TAIR10
Match: AT1G10500.1 (AT1G10500.1 chloroplast-localized ISCA-like protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.8e-12
Identity = 43/142 (30.28%), Postives = 72/142 (50.70%), Query Frame = 1


Query: 13  YLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMKELQ-EPMEEKML 72
           Y+  ++ +  RL   S S     +   + P+     I +S+N ++ + +++ E  E+  L
Sbjct: 41  YVNLNLNRRNRLSVRSASVPAAPAMEGLKPA-----ISLSENALKHLSKMRSERGEDLCL 100

Query: 73  RLSVENGGCSGFQYVFNLDDKTN--PDDRVCEKEGVKLVVDNISYDFVKGATIDYVEELI 132
           R+ V+ GGCSG  Y  + +++ N  PDD   E +G  +V D  S  F+ G  +DY + LI
Sbjct: 101 RIGVKQGGCSGMSYTMDFENRANARPDDSTIEYQGFTIVCDPKSMLFLFGMQLDYSDALI 160

Query: 133 RSAFIVTTNPSAVGGCSCKSSF 152
              F   +NP+A   C C  SF
Sbjct: 161 GGGFSF-SNPNATQTCGCGKSF 176

[Close]

BLAST of CSPI01G13300 vs. TAIR10
Match: AT2G16710.3 (AT2G16710.3 Iron-sulphur cluster biosynthesis family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 37/124 (29.84%), Postives = 68/124 (54.84%), Query Frame = 1


Query: 35  ASSSLITPSAGIDTIHMSDNCIRRMKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTN 94
           A+++ + P+     + ++D    R+  L +  ++  LRL V+  GC+G  Y  N   KT+
Sbjct: 9   AAAARVGPALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYAGKTS 68

Query: 95  PDDR------VCEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFIVTTNPSAVGGCSCK 153
            +D       + E++GV+++V+  +   V G  +D+V++ +RS F V  NP++ G C C 
Sbjct: 69  GNDEKGKFDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEF-VFINPNSQGQCGCG 128

[Close]

BLAST of CSPI01G13300 vs. NCBI nr
Match: gi|449459108|ref|XP_004147288.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 1.7e-81
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK 60
           MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK
Sbjct: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK 60

Query: 61  ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA 120
           ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA
Sbjct: 61  ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA 120

Query: 121 TIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 156
           TIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 TIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 155

[Close]

BLAST of CSPI01G13300 vs. NCBI nr
Match: gi|778659089|ref|XP_011653808.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 281.6 bits (719), Expect = 8.5e-73
Identity = 142/144 (98.61%), Postives = 142/144 (98.61%), Query Frame = 1


Query: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK 60
           MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK
Sbjct: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK 60

Query: 61  ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA 120
           ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA
Sbjct: 61  ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA 120

Query: 121 TIDYVEELIRSAFIVTTNPSAVGG 145
           TIDYVEELIRSAFIVTTNPS V G
Sbjct: 121 TIDYVEELIRSAFIVTTNPSDVEG 144

[Close]

BLAST of CSPI01G13300 vs. NCBI nr
Match: gi|700209707|gb|KGN64803.1| (hypothetical protein Csa_1G108280 [Cucumis sativus])

HSP 1 Score: 266.9 bits (681), Expect = 2.2e-68
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1


Query: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK 60
           MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK
Sbjct: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPSAGIDTIHMSDNCIRRMK 60

Query: 61  ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA 120
           ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA
Sbjct: 61  ELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVKGA 120

Query: 121 TIDYVEELIRSAFI 135
           TIDYVEELIRSAFI
Sbjct: 121 TIDYVEELIRSAFI 134

[Close]

BLAST of CSPI01G13300 vs. NCBI nr
Match: gi|449470384|ref|XP_004152897.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 6.6e-65
Identity = 130/157 (82.80%), Postives = 141/157 (89.81%), Query Frame = 1


Query: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEAS--SSLITPSAGIDTIHMSDNCIRR 60
           M PR LIQR+TPYL A I++NQRLLSSS SAYQEA   S   +PSA +DTIHM+D+CIRR
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRR 60

Query: 61  MKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDFVK 120
           MKELQ+P EEKMLRLSVE GGCSGFQYVFNLD KTNPDDR+ EKEGVKLVVDNISYDFVK
Sbjct: 61  MKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVK 120

Query: 121 GATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 156
           GATIDYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 GATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

[Close]

BLAST of CSPI01G13300 vs. NCBI nr
Match: gi|659115367|ref|XP_008457521.1| (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-64
Identity = 129/159 (81.13%), Postives = 141/159 (88.68%), Query Frame = 1


Query: 1   MVPRFLIQRLTPYLGAHIRKNQRLLSSSVSAYQEASSSLITPS----AGIDTIHMSDNCI 60
           M PR LIQR+TPYL A I++NQRLLSSS +AYQEASS   +PS    A +DTIHM+D+CI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQEPMEEKMLRLSVENGGCSGFQYVFNLDDKTNPDDRVCEKEGVKLVVDNISYDF 120
           RRMKELQ+P EEKMLRLSVE GGCSGFQYVFNLD KT PDDR+ EKEGVKLVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFIVTTNPSAVGGCSCKSSFMVKQ 156
           VKGATIDYVEELIRSAF+V+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

The following BLAST results are available for this feature:

BLAST of CSPI01G13300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ISAM2_ARATH	2.2e-52	70.51	Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana ...	[more]
ISCA2_BOVIN	6.8e-30	51.85	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus GN=ISCA2 PE=...	[more]
ISCA2_PONAB	1.5e-29	53.73	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii GN=ISCA2 P...	[more]
ISCA2_HUMAN	1.5e-29	53.73	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 P...	[more]
ISCA2_MOUSE	6.4e-28	49.26	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 P...	[more]

BLAST of CSPI01G13300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSN2_CUCSA	1.5e-68	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G108280 PE=4 SV=1	[more]
A0A0A0LXX8_CUCSA	4.6e-65	82.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G496290 PE=4 SV=1	[more]
A0A0D2QDP8_GOSRA	2.1e-54	72.78	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G158400 PE=4 SV=1	[more]
A0A0B0MTF5_GOSAR	2.1e-54	72.33	Uncharacterized protein OS=Gossypium arboreum GN=F383_28491 PE=4 SV=1	[more]
A0A140B491_PRUPE	2.8e-54	73.58	Fe-S cluster assembly transfer protein 19 OS=Prunus persica var. persica GN=ISA3...	[more]

BLAST of CSPI01G13300 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G03905.1	1.2e-53	70.51	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G36260.1	1.8e-12	37.62	Iron-sulphur cluster biosynthesis family protein	[more]
AT1G10500.1	1.8e-12	30.28	chloroplast-localized ISCA-like protein	[more]
AT2G16710.3	1.2e-11	29.84	Iron-sulphur cluster biosynthesis family protein	[more]

BLAST of CSPI01G13300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459108\|ref\|XP_004147288.1\|	1.7e-81	100.00	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X1 [C...	[more]
gi\|778659089\|ref\|XP_011653808.1\|	8.5e-73	98.61	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [C...	[more]
gi\|700209707\|gb\|KGN64803.1\|	2.2e-68	100.00	hypothetical protein Csa_1G108280 [Cucumis sativus]	[more]
gi\|449470384\|ref\|XP_004152897.1\|	6.6e-65	82.80	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sati...	[more]
gi\|659115367\|ref\|XP_008457521.1\|	2.5e-64	81.13	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial isoform X2 [C...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000361	FeS_biogenesis
IPR016092	FeS_cluster_insertion
IPR000361	FeS_biogenesis
IPR016092	FeS_cluster_insertion

Vocabulary: **Molecular Function**
Term	Definition
GO:0005198	structural molecule activity
GO:0051536	iron-sulfur cluster binding
GO:0005198	structural molecule activity
GO:0051536	iron-sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016226	iron-sulfur cluster assembly
GO:0016226	iron-sulfur cluster assembly

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0097428	protein maturation by iron-sulfur cluster transfer
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0005198	structural molecule activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G13300.2	CSPI01G13300.2	mRNA
CSPI01G13300.1	CSPI01G13300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000361	FeS cluster biogenesis	GENE3D	G3DSA:2.60.300.12		coord: 48..133 score: 7.0
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 49..137 score: 3.0
IPR000361	FeS cluster biogenesis	unknown	SSF89360	HesB-like domain	coord: 46..134 score: 1.06
IPR016092	FeS cluster insertion protein	TIGRFAMs	TIGR00049	TIGR00049	coord: 49..134 score: 1.8
None	No IPR available	PANTHER	PTHR10072	IRON-SULFUR CLUSTER ASSEMBLY PROTEIN	coord: 3..134 score: 3.5
None	No IPR available	PANTHER	PTHR10072:SF46	IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL	coord: 3..134 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G13300	Cla005089	Watermelon (97103) v1	cpiwmB012
CSPI01G13300	Csa1G108280	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G13300	ClCG03G002740	Watermelon (Charleston Gray)	cpiwcgB040
CSPI01G13300	CsaV3_1G013480	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G13300	Cla97C03G053770	Watermelon (97103) v2	cpiwmbB034
CSPI01G13300	Bhi08G000209	Wax gourd	cpiwgoB049
CSPI01G13300	Cucsa.292560	Cucumber (Gy14) v1	cgycpiB442
CSPI01G13300	Cp4.1LG02g12660	Cucurbita pepo (Zucchini)	cpecpiB530
CSPI01G13300	CsGy1G013410	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G13300	Carg12293	Silver-seed gourd	carcpiB0477

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G13300	Cucurbita moschata (Rifu)	cmocpiB192
CSPI01G13300	Cucurbita moschata (Rifu)	cmocpiB425
CSPI01G13300	Cucumber (Chinese Long) v2	cpicuB026
CSPI01G13300	Melon (DHL92) v3.5.1	cpimeB011
CSPI01G13300	Watermelon (Charleston Gray)	cpiwcgB007
CSPI01G13300	Watermelon (97103) v1	cpiwmB007
CSPI01G13300	Cucurbita pepo (Zucchini)	cpecpiB518
CSPI01G13300	Bottle gourd (USVL1VR-Ls)	cpilsiB046
CSPI01G13300	Melon (DHL92) v3.6.1	cpimedB011
CSPI01G13300	Silver-seed gourd	carcpiB1105
CSPI01G13300	Wax gourd	cpiwgoB017
CSPI01G13300	Wild cucumber (PI 183967)	cpicpiB017
CSPI01G13300	Cucurbita maxima (Rimu)	cmacpiB205
CSPI01G13300	Cucurbita maxima (Rimu)	cmacpiB434