Cla004293 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGGAAATCAAGGCCATTGGAGTCGTCGGCGGCGGTCAAATGGGCTCCGGAATTGCCCAACTCGCCGCCACACACGGCCATGAAGTTTGGCTAATTGATTCAGACCCTTCCGCTCTTGCTAAAGCGTCCGACTCCATTTCTTCCTCAATCCAACGCCTGGTCTCCAGAAAACTTCTCTCTCGAGTAAGAATTCTTTCCATTGATTGCTTCGTCTAACTTCTACATGGTTCTTTTGACTGGAGGGCTTTGAGTGTCATTGGATGCTTTATTAGTTGTTTTATGTTACCTTTGAGTTATCATTTCTTGGGTGTTTTTTGTTGTTTATTTTGTTAGAATTTCTCTAAACAGATTAATTGCAGAGAATCACAAAGTGTTAGGGCTTGTTATGGAGTGATTTCGAAACGTTTAAATCCGAAAACGTGTATTTCATTATTCAAAATCAATTTATTGTTTGATTTCACACCTTTAAACACGATTTTTATACCATTGAAATTGTTTTTGAATTATTAAAGAGATTTTTTAAATTAGGGTGGAAAATGCTTGATTTAGTATTACTTTGTTGTTTACTTATGAACAATCTATAACATTAGGAGATTGCAGTCTCTTGGCCCTATTAATACCCATTCTACTCAGGATAACATTTGATCCTCTGTTTTAGGAAAAAGAAAACAAGAGAATCCTTTCCAAATTCCGTGCTTGTGATATTCTTGTGCCCTCCCGTACTGATGGACTAAGGAAAATATGGTCTAAAGAGTTTTGATCCTGTCGTGACGACTGTACGTTTGGATGGCAGTGTCAATACCAAAGATGACAGGTATTAATGGGAGCTTGGCTAAATCCTCTTAAAAATAGATCAATAATTGAAATTGACAATGGACTCAAACTCATTCATTGACATATGATCGCCAGGGAATTGGGTTTGATTGGAGGGAGGCGATGAAACATGAGTGACCTTGACGAACTAATCCACCAGATGATGATGCATTGAGCCCAATCTACTTTTTTTGCGTTAAACAATAATAACTTACAGACTTATAGAAGCCGTGAAAAATATGAACTAAATCAATAGAGGTAAGATTTTAGAAGTGGAGAATGCTGAAAGCCTCAGTACATTTTTTCTAAGTTAGCATCCTTTTAATTTTCTATGGCTATAAATGGAATGTAAATGAGAGGAAAGTTTATAGCCAGCTATTGCAATATATTATACTGTTTTGTAATAATATGATCATAATAAATAGTTAATGAGTCATGAGTAGGGTGACTGTGGATTCAACTCATGTTGGCTACCTATTTCTTGAAGAGCATATTTATATAAAGGTTAGGTGACTATAAATAATGCTGAGTTAGGGAGGATTTTTCTTTTCTTTTTCTTTCTTTATCTATTTATTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGTTTTTTNNGTTGGTCGTGGGTGGTGGGGGGGGGGGGGGTTTCGCCTATGATGCTGAGTTAATCTTTGTCTTTTCATGTCTTTTATTACTTAGACCGATAGAATATTACTAACGTCTTTTCAAATTCTTATGGCCTATGATGCAAAATATTTTGTACGTATTAAGCACAATTTGATCCGAAGTTCTGAGTTATTTATTACGGGTTTGACATTGATTATGTAATGCTGACATACAACTCTATAACAGAGTTCTACCGTTCAAATGAACTTCTCTGTTACTCTATTTAAGTTCTGCCGTCCAAATGGTAGACATTTAACTAGCTTATGAAATCCACTTAACAGGAAATTGGTGTCAATGCTCTTCAACGTCTAAGATTTTCAACTGATTTGAAAGAGCTTCATTCAGCAGATGTCATCATTGAAGCTATCGTGGAATCAGAAGATGTTAAAAGAAAGCTATTTCTTGAATTAGATAAGATTGCAAAACGGTCTTCCATTCTAGCTTCTAATACAAGTTCCATCCCGATTACTCGCCTAGCATCAGCAACCACACGTCCTGAGCAGGTTTCAGCTTCTCTTCCCCCTCATATGCACGAATGCCGATACATAATCATTAATCTTGTGCATTAACCTGCTGTTTTTCTCTTGAAGTGTCATTTTGTATAGTTTTACTTGCTAGCCATGTGGTTTTAGTATGCATCGAATGAAACTGCAACCAAGAGAGACTAAAAGGGAAGTTGTATGTTAGATAAACATGATACTTCATTGGCAATGGGATGAGCAATCCATGTATCATATAAAGATTGTGAGGTTTCTTTATCTTTCCATCGTGGGATCTTCAACATTGCAAGCTTGCAAGTGAAACATTTAATGCTATTGCAGGTTATTGGCATGCATTTCATGAATCCCCCACCTATAATGAAACTGGTTGAGATCGTTCGAGGTGCGGATACATCCAATGAAACATTCGATGCCATAAAAATCTTGGCTGAGAGGTGATTCTCACTTCATTGGTTGCTCTCAAATTCACCTCTGTCTCCCCTCCACCATCAGTTGTCTTTTCTAGTAGCATGGGACTACTTCACTTGAAAAACTTTCTTTACTTTCAGGCTTGGTAAAACAGTGATATGTTCTCAGGACTACTCTGGCTTCATCGTGAACAGAATCCTAATGCCGATGATTAACGAGGCATTTTTTGCTCTCTTCACGGGAGTGGCAACGAAGGAAGACATCGACACGGGAATGAAGCTAGGAACAAATCATCCCATGGGTCCCTTGGAGCTTGCAGACTTCATTGGTTTGGATGTTTGTTTATCAATCATGAAGGTTCTCCACTCTGGACTTGGTGACAATAAATATGCTCCCTGCCCTCTTCTCGTGCAGTACGTCGATGCTGGCCGCCTGGGAAGAAAGCGGGGAATAGGCGTATACGATTACCGTAAATTACCGCAATCAGAAAAATCCAAGTCACGACTTTGA ATGACGGAAATCAAGGCCATTGGAGTCGTCGGCGGCGGTCAAATGGGCTCCGGAATTGCCCAACTCGCCGCCACACACGGCCATGAAGTTTGGCTAATTGATTCAGACCCTTCCGCTCTTGCTAAAGCGTCCGACTCCATTTCTTCCTCAATCCAACGCCTGGTCTCCAGAAAACTTCTCTCTCGAGAAATTGGTGTCAATGCTCTTCAACGTCTAAGATTTTCAACTGATTTGAAAGAGCTTCATTCAGCAGATGTCATCATTGAAGCTATCGTGGAATCAGAAGATGTTAAAAGAAAGCTATTTCTTGAATTAGATAAGATTGCAAAACGGTCTTCCATTCTAGCTTCTAATACAAGTTCCATCCCGATTACTCGCCTAGCATCAGCAACCACACGTCCTGAGCAGGTTATTGGCATGCATTTCATGAATCCCCCACCTATAATGAAACTGGTTGAGATCGTTCGAGGTGCGGATACATCCAATGAAACATTCGATGCCATAAAAATCTTGGCTGAGAGGCTTGGTAAAACAGTGATATGTTCTCAGGACTACTCTGGCTTCATCGTGAACAGAATCCTAATGCCGATGATTAACGAGGCATTTTTTGCTCTCTTCACGGGAGTGGCAACGAAGGAAGACATCGACACGGGAATGAAGCTAGGAACAAATCATCCCATGGGTCCCTTGGAGCTTGCAGACTTCATTGGTTTGGATGTTTGTTTATCAATCATGAAGGTTCTCCACTCTGGACTTGGTGACAATAAATATGCTCCCTGCCCTCTTCTCGTGCAGTACGTCGATGCTGGCCGCCTGGGAAGAAAGCGGGGAATAGGCGTATACGATTACCGTAAATTACCGCAATCAGAAAAATCCAAGTCACGACTTTGA ATGACGGAAATCAAGGCCATTGGAGTCGTCGGCGGCGGTCAAATGGGCTCCGGAATTGCCCAACTCGCCGCCACACACGGCCATGAAGTTTGGCTAATTGATTCAGACCCTTCCGCTCTTGCTAAAGCGTCCGACTCCATTTCTTCCTCAATCCAACGCCTGGTCTCCAGAAAACTTCTCTCTCGAGAAATTGGTGTCAATGCTCTTCAACGTCTAAGATTTTCAACTGATTTGAAAGAGCTTCATTCAGCAGATGTCATCATTGAAGCTATCGTGGAATCAGAAGATGTTAAAAGAAAGCTATTTCTTGAATTAGATAAGATTGCAAAACGGTCTTCCATTCTAGCTTCTAATACAAGTTCCATCCCGATTACTCGCCTAGCATCAGCAACCACACGTCCTGAGCAGGTTATTGGCATGCATTTCATGAATCCCCCACCTATAATGAAACTGGTTGAGATCGTTCGAGGTGCGGATACATCCAATGAAACATTCGATGCCATAAAAATCTTGGCTGAGAGGCTTGGTAAAACAGTGATATGTTCTCAGGACTACTCTGGCTTCATCGTGAACAGAATCCTAATGCCGATGATTAACGAGGCATTTTTTGCTCTCTTCACGGGAGTGGCAACGAAGGAAGACATCGACACGGGAATGAAGCTAGGAACAAATCATCCCATGGGTCCCTTGGAGCTTGCAGACTTCATTGGTTTGGATGTTTGTTTATCAATCATGAAGGTTCTCCACTCTGGACTTGGTGACAATAAATATGCTCCCTGCCCTCTTCTCGTGCAGTACGTCGATGCTGGCCGCCTGGGAAGAAAGCGGGGAATAGGCGTATACGATTACCGTAAATTACCGCAATCAGAAAAATCCAAGTCACGACTTTGA MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPSALAKASDSISSSIQRLVSRKLLSREIGVNALQRLRFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSIPITRLASATTRPEQVIGMHFMNPPPIMKLVEIVRGADTSNETFDAIKILAERLGKTVICSQDYSGFIVNRILMPMINEAFFALFTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSEKSKSRL
BLAST of Cla004293 vs. Swiss-Prot
Match: HBD_BRADU (3-hydroxybutyryl-CoA dehydrogenase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=hbdA PE=3 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.8e-82 Identity = 156/281 (55.52%), Postives = 198/281 (70.46%), Query Frame = 1
BLAST of Cla004293 vs. Swiss-Prot
Match: HBD_BACSU (Probable 3-hydroxybutyryl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgB PE=2 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 7.5e-78 Identity = 150/283 (53.00%), Postives = 189/283 (66.78%), Query Frame = 1
BLAST of Cla004293 vs. Swiss-Prot
Match: HBD_CLOAB (3-hydroxybutyryl-CoA dehydrogenase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=hbd PE=1 SV=2) HSP 1 Score: 282.7 bits (722), Expect = 4.6e-75 Identity = 148/282 (52.48%), Postives = 188/282 (66.67%), Query Frame = 1
BLAST of Cla004293 vs. Swiss-Prot
Match: HBD_DEIRA (Probable 3-hydroxybutyryl-CoA dehydrogenase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=hbd PE=3 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.0e-74 Identity = 148/276 (53.62%), Postives = 186/276 (67.39%), Query Frame = 1
BLAST of Cla004293 vs. Swiss-Prot
Match: HBD_THETC (3-hydroxybutyryl-CoA dehydrogenase OS=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=hbd PE=3 SV=2) HSP 1 Score: 273.1 bits (697), Expect = 3.6e-72 Identity = 142/281 (50.53%), Postives = 194/281 (69.04%), Query Frame = 1
BLAST of Cla004293 vs. TrEMBL
Match: M5WGP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009256mg PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 2.5e-128 Identity = 234/296 (79.05%), Postives = 268/296 (90.54%), Query Frame = 1
BLAST of Cla004293 vs. TrEMBL
Match: A0A061F847_THECC (3-hydroxyacyl-CoA dehydrogenase family protein isoform 1 OS=Theobroma cacao GN=TCM_031591 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 1.0e-126 Identity = 233/296 (78.72%), Postives = 262/296 (88.51%), Query Frame = 1
BLAST of Cla004293 vs. TrEMBL
Match: B0M194_SOYBN (Peroxisomal 3-hydroxyacyl-CoA dehydrogenase-like protein OS=Glycine max GN=GLYMA_06G254700 PE=2 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 3.9e-126 Identity = 232/296 (78.38%), Postives = 261/296 (88.18%), Query Frame = 1
BLAST of Cla004293 vs. TrEMBL
Match: A0A151S5Q0_CAJCA (3-hydroxybutyryl-CoA dehydrogenase OS=Cajanus cajan GN=KK1_028169 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 8.8e-126 Identity = 229/296 (77.36%), Postives = 266/296 (89.86%), Query Frame = 1
BLAST of Cla004293 vs. TrEMBL
Match: V4ULA7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009049mg PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 3.3e-125 Identity = 224/294 (76.19%), Postives = 263/294 (89.46%), Query Frame = 1
BLAST of Cla004293 vs. NCBI nr
Match: gi|470120898|ref|XP_004296524.1| (PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Fragaria vesca subsp. vesca]) HSP 1 Score: 469.9 bits (1208), Expect = 3.2e-129 Identity = 235/296 (79.39%), Postives = 269/296 (90.88%), Query Frame = 1
BLAST of Cla004293 vs. NCBI nr
Match: gi|658029110|ref|XP_008349997.1| (PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Malus domestica]) HSP 1 Score: 467.6 bits (1202), Expect = 1.6e-128 Identity = 230/294 (78.23%), Postives = 270/294 (91.84%), Query Frame = 1
BLAST of Cla004293 vs. NCBI nr
Match: gi|645240165|ref|XP_008226480.1| (PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Prunus mume]) HSP 1 Score: 466.5 bits (1199), Expect = 3.6e-128 Identity = 233/296 (78.72%), Postives = 267/296 (90.20%), Query Frame = 1
BLAST of Cla004293 vs. NCBI nr
Match: gi|595864044|ref|XP_007211700.1| (hypothetical protein PRUPE_ppa009256mg [Prunus persica]) HSP 1 Score: 466.5 bits (1199), Expect = 3.6e-128 Identity = 234/296 (79.05%), Postives = 268/296 (90.54%), Query Frame = 1
BLAST of Cla004293 vs. NCBI nr
Match: gi|694317998|ref|XP_009340783.1| (PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Pyrus x bretschneideri]) HSP 1 Score: 465.7 bits (1197), Expect = 6.1e-128 Identity = 230/294 (78.23%), Postives = 269/294 (91.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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