Lsi05G001390 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G001390
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionFatty acid oxidation complex subunit alpha
Locationchr05 : 2055082 .. 2057813 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGAAATCAAGGCCATTGGAGTCGTCGGAGGCGGTCAAATGGGATCCGGAATTGCCCAACTCGCCGCCACACACGGCCATGAAGTTTGGCTAATTGATTCAGACCCTGCCGCTCTTGCTAAAGCATCCGACTCCATTTCTTCCTCAATCCAACGCCTGGTCTCTAAAAACCTTCTCTCTCGAGTAAGAATTCTTTCCATTCATTGCTTCGCTTAACTTCTACGTAGTTCTTTTGACTGGAGGGCTTTGAGTGTCATTGGATCCTTTATTAGCTGTTTTATGTTACCTTTGAGTTATCATTTATTGGGTGTTTTGTGTTGTTTATTTTGAAATTGCTCTTAACAGATCAATTGCAGAGAATCACAAAGTGTTAGGGCTTGTTATGGAGTGATTTGGAAATGTCTAAATCTGAAACGTGTATTTCATTATTCAAAATCAATTTATTGTTTGATTTCACACTTTTAAGCATGAGTTTATACCATTGAAATTGATTTTGAATTATTAAAGAGATTTTTCGGAGTTATTTTAAAAATGACAAGCACCCTCTTAATGATTAGGGTGGAAAATGCTTGATTTATTATTATTTATTTGGTTGTTTACTTATGAACAATCTATAGCAATAGGAAATTGCAGTCTCTTGGCCCTATCGTTACCCTTTCTACTGAGGATAACACTGATCCACTGTCTTAGGAAAAAGAAAACAAGAGAATCCTTTCCATATTCCATGTCTCTGCAGAGAAGCTTGTGATATTCTTGTGCTCTCCCATACTGATGGACTAGGAAAATATGGTCTAAAATATTTCAATCCTGCCATGACGACGGTACGTGTCGATGCCAGTGTCAGTACCAAAGATGACAAATATTAGTGGGAGCTTGGCTAAATCCTCTTGAATATAGATCAATAATTGAAATTGAAAATAGTTTCATTCAATGACATATGATCACCAGGGAATTGGATTTGATTGGAGGTAGCCAATGAAACAAGAGTGAACCTTGACGAGCTTCTCTGTGAGCCACAAGATGATGCATTAAACCCAATGTACTTTCTTATAGCTCTTCAATCTTTTGCATTAAACAATAATAACTTGCAGGCTTATAGAAGCCATGAATAATATGGAACTAAATCAATAGAGGAAAGATTTTAGAAGTGGAGAATAAATGGAATGTAAATGAGAATAACTATAGCCAGCTATTGCAATATATTAGAGTGTATTGTAATAATACGATTGTAATAAACAGCTAACGAGTGTTTTGACTGTAGATTCTACCCATGGTGGCTACCTATTTCATAAAGGTTAGGTGACTATGAATAATGCTGAGTAAGGGAGGATTTTTTTTTTTTTTTGTTTTTATCTTTACTAATGTCTTTTCAAATTCTTATGGCCTATGATGCAAAATAAATGTTTCATCCGCATTGAGCACAGTTTGATCCGAAGTTAAAACTGAGTTATTTATTACGGGTTTGTCATTGATTATGGAAAGGCTGACATACAACTCTATAACAGAGTTCTACCGGTCAAATGAACTTCTCTGTTACTCTATTTAAGTTCTGCCGTCCAAATGGTAGATATTTAACCAGCGTATGAAATCCACTTAACAGGAAGTTGGTGTCATTGCTCTTCAACGTCTTAAGTTTTCAACTGATTTGAAAGAGCTTCATTCAGCAGATGTCATCATCGAAGCTATCGTGGAATCAGAAGATGTTAAAAGAAAGCTATTTCTTGAATTAGATAAGATTGCAAAACGGTCTTCCATTCTAGCTTCTAATACAAGTTCCATCCCGATTACTCGCTTAGCATCAGCAACCACACGTCCTGACCAGGTTTCAGCTTCTCTTCCCCCTCATATGCATGAATGCCGATACATAATCATTAATCTTGTGCATTAAACTGCTGTTTTTCTCTTGAAGTGTCTTTGATATGTAGTTTTACTAGCTAGCCATGTGGTTTTAGCATACATTGAATGAAACTACAATTATAAAATTAACATAGGATTTTATCTCAAAATCAATTGGCAATGAGTGGAGTAGTCTCTGTATCAATAAAGATTGTGAGGTCTCTTTGTCTTTCCGATGTGAAGTCTTCAACATTGCAAGCTTGCAAGTGAAACATTTAATATCATTGCAGGTTATTGGCATGCATTTCATGAATCCCCCACCTATAATGAAGTTGGTTGAGATTGTTCGAGGTGCGGATACATCCAATAAAACATTTGATGCCATAAAAATCTTGGCTGAGAGGTGATTCACTTCATTGATTGCTCTCAAATTCGCCTCTTTTCCTCCTCCACCATCAGTTGTCTTTTCTAGTAACACGGGACGACTTCACTTGATAATAGTTTTAACTTTCTTTACTTTCAGGCTTGGCAAAACAGTGATATGTTCTCAGGACTACTCTGGCTTCATAGTGAACAGAATCCTAATGCCAATGATTAACGAGGCGTTTTTTGCTCTCTACACGGGAGTGGCAACGAAGGAAGACATTGACACGGGAATGAAGCTAGGAACAAATCATCCTATGGGTCCCTTGGAGCTCGCAGACTTCATTGGTTTGGATGTCTGTTTATCAATCATGAAGGTTCTCCACTCTGGACTTGGTGACAATAAATATGCTCCCTGCCCTCTTCTCGTGCAGTATGTTGATGCTGGTCGCCTGGGAAGAAAGCGGGGAATAGGCGTATACGATTACCGTAAATTACCGCAATCGGTAAAATCCAAGTCCCGACTTTGA

mRNA sequence

ATGACGGAAATCAAGGCCATTGGAGTCGTCGGAGGCGGTCAAATGGGATCCGGAATTGCCCAACTCGCCGCCACACACGGCCATGAAGTTTGGCTAATTGATTCAGACCCTGCCGCTCTTGCTAAAGCATCCGACTCCATTTCTTCCTCAATCCAACGCCTGGTCTCTAAAAACCTTCTCTCTCGAGAAGTTGGTGTCATTGCTCTTCAACGTCTTAAGTTTTCAACTGATTTGAAAGAGCTTCATTCAGCAGATGTCATCATCGAAGCTATCGTGGAATCAGAAGATGTTAAAAGAAAGCTATTTCTTGAATTAGATAAGATTGCAAAACGGTCTTCCATTCTAGCTTCTAATACAAGTTCCATCCCGATTACTCGCTTAGCATCAGCAACCACACGTCCTGACCAGTTGGTTGAGATTGTTCGAGGTGCGGATACATCCAATAAAACATTTGATGCCATAAAAATCTTGGCTGAGAGGCTTGGCAAAACAGTGATATGTTCTCAGGACTACTCTGGCTTCATAGTGAACAGAATCCTAATGCCAATGATTAACGAGGCGTTTTTTGCTCTCTACACGGGAGTGGCAACGAAGGAAGACATTGACACGGGAATGAAGCTAGGAACAAATCATCCTATGGGTCCCTTGGAGCTCGCAGACTTCATTGGTTTGGATGTCTGTTTATCAATCATGAAGGTTCTCCACTCTGGACTTGGTGACAATAAATATGCTCCCTGCCCTCTTCTCGTGCAGTATGTTGATGCTGGTCGCCTGGGAAGAAAGCGGGGAATAGGCGTATACGATTACCGTAAATTACCGCAATCGGTAAAATCCAAGTCCCGACTTTGA

Coding sequence (CDS)

ATGACGGAAATCAAGGCCATTGGAGTCGTCGGAGGCGGTCAAATGGGATCCGGAATTGCCCAACTCGCCGCCACACACGGCCATGAAGTTTGGCTAATTGATTCAGACCCTGCCGCTCTTGCTAAAGCATCCGACTCCATTTCTTCCTCAATCCAACGCCTGGTCTCTAAAAACCTTCTCTCTCGAGAAGTTGGTGTCATTGCTCTTCAACGTCTTAAGTTTTCAACTGATTTGAAAGAGCTTCATTCAGCAGATGTCATCATCGAAGCTATCGTGGAATCAGAAGATGTTAAAAGAAAGCTATTTCTTGAATTAGATAAGATTGCAAAACGGTCTTCCATTCTAGCTTCTAATACAAGTTCCATCCCGATTACTCGCTTAGCATCAGCAACCACACGTCCTGACCAGTTGGTTGAGATTGTTCGAGGTGCGGATACATCCAATAAAACATTTGATGCCATAAAAATCTTGGCTGAGAGGCTTGGCAAAACAGTGATATGTTCTCAGGACTACTCTGGCTTCATAGTGAACAGAATCCTAATGCCAATGATTAACGAGGCGTTTTTTGCTCTCTACACGGGAGTGGCAACGAAGGAAGACATTGACACGGGAATGAAGCTAGGAACAAATCATCCTATGGGTCCCTTGGAGCTCGCAGACTTCATTGGTTTGGATGTCTGTTTATCAATCATGAAGGTTCTCCACTCTGGACTTGGTGACAATAAATATGCTCCCTGCCCTCTTCTCGTGCAGTATGTTGATGCTGGTCGCCTGGGAAGAAAGCGGGGAATAGGCGTATACGATTACCGTAAATTACCGCAATCGGTAAAATCCAAGTCCCGACTTTGA

Protein sequence

MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSIPITRLASATTRPDQLVEIVRGADTSNKTFDAIKILAERLGKTVICSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL
Homology
[Close]
BLAST of Lsi05G001390 vs. Swiss-Prot
Match: HBD_BRADU (3-hydroxybutyryl-CoA dehydrogenase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=hbdA PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.2e-71
Identity = 147/281 (52.31%), Postives = 187/281 (66.55%), Query Frame = 1 

Query: 4   IKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSRE 63
           IK +GV+G GQMG+GIA +AA  G +V L D     L     +I+ ++ R VSK +++ E
Sbjct: 5   IKKVGVIGAGQMGNGIAHVAALAGFDVVLNDVSADRLKSGMATINGNLARQVSKKVVTEE 64

Query: 64  VGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSIP 123
               AL R+  +  L +L   D++IE  VE E+VKRK+F EL  + K  +I+AS+TSSI 
Sbjct: 65  AKTKALSRIVAAEKLDDLADCDLVIETAVEKEEVKRKIFHELCAVLKPEAIVASDTSSIS 124

Query: 124 ITRLASATTRPD--------------QLVEIVRGADTSNKTFDAIKILAERLGKTVICSQ 183
           ITRLA+AT RP+              +LVE++RG  T + TF+A K    +LGK V  S+
Sbjct: 125 ITRLAAATDRPERFIGIHFMNPVPLMELVELIRGIATDDATFEASKEFVAKLGKQVAVSE 184

Query: 184 DYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLS 243
           D+  FIVNRIL+PMINEA + LY GV   E ID  MKLG +HPMGPLELADFIGLD CLS
Sbjct: 185 DFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDAAMKLGAHHPMGPLELADFIGLDTCLS 244

Query: 244 IMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYR 271
           IM+VLH GL D+KY PCPLLV+YV+AG LGRK   G YDYR
Sbjct: 245 IMQVLHEGLADSKYRPCPLLVKYVEAGWLGRKTQRGFYDYR 285

[Close]
BLAST of Lsi05G001390 vs. Swiss-Prot
Match: HBD_BACSU (Probable 3-hydroxybutyryl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN=mmgB PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.3e-66
Identity = 139/283 (49.12%), Postives = 176/283 (62.19%), Query Frame = 1 

Query: 3   EIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSR 62
           EIK I V G GQMGSGIAQ AA  G  V + D +P A       +   + R   K   + 
Sbjct: 2   EIKQIMVAGAGQMGSGIAQTAADAGFYVRMYDVNPEAAEAGLKRLKKQLARDAEKGKRTE 61

Query: 63  EVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSI 122
                 + R+  S  L+E   AD++IEAI E+   K ++F  LD+I    +ILASNTSS+
Sbjct: 62  TEVKSVINRISISQTLEEAEHADIVIEAIAENMAAKTEMFKTLDRICPPHTILASNTSSL 121

Query: 123 PITRLASATTRPD--------------QLVEIVRGADTSNKTFDAIKILAERLGKTVICS 182
           PIT +A+ T RP               +LVE++RG  TS +T   +  LAE++GKT +  
Sbjct: 122 PITEIAAVTNRPQRVIGMHFMNPVPVMKLVEVIRGLATSEETALDVMALAEKMGKTAVEV 181

Query: 183 QDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCL 242
            D+ GF+ NR+L+PMINEA + +Y GVA  E ID  MKLG NHPMGPL LADFIGLD CL
Sbjct: 182 NDFPGFVSNRVLLPMINEAIYCVYEGVAKPEAIDEVMKLGMNHPMGPLALADFIGLDTCL 241

Query: 243 SIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRK 272
           SIM+VLHSGLGD+KY PCPLL +YV AG LG+K G G YDY +
Sbjct: 242 SIMEVLHSGLGDSKYRPCPLLRKYVKAGWLGKKSGRGFYDYEE 284

[Close]
BLAST of Lsi05G001390 vs. Swiss-Prot
Match: HBD_CLOAB (3-hydroxybutyryl-CoA dehydrogenase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=hbd PE=1 SV=2)

HSP 1 Score: 245.4 bits (625), Expect = 7.7e-64
Identity = 138/282 (48.94%), Postives = 178/282 (63.12%), Query Frame = 1 

Query: 4   IKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSRE 63
           +K + V+G G MGSGIAQ  A  G EV L D     + +  D I+ ++ +LV K  +   
Sbjct: 1   MKKVCVIGAGTMGSGIAQAFAAKGFEVVLRDIKDEFVDRGLDFINKNLSKLVKKGKIEEA 60

Query: 64  VGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSIP 123
             V  L R+  + DL      D++IEA VE  D+K+++F +LD I K  +ILASNTSS+ 
Sbjct: 61  TKVEILTRISGTVDLNMAADCDLVIEAAVERMDIKKQIFADLDNICKPETILASNTSSLS 120

Query: 124 ITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVICSQ 183
           IT +ASAT RPD+              LVE++RG  TS +TFDA+K  +  +GK  +   
Sbjct: 121 ITEVASATKRPDKVIGMHFFNPAPVMKLVEVIRGIATSQETFDAVKETSIAIGKDPVEVA 180

Query: 184 DYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLS 243
           +  GF+VNRIL+PMINEA   L  G+A+ EDID  MKLG NHPMGPLEL DFIGLD+CL+
Sbjct: 181 EAPGFVVNRILIPMINEAVGILAEGIASVEDIDKAMKLGANHPMGPLELGDFIGLDICLA 240

Query: 244 IMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRK 272
           IM VL+S  GD+KY P  LL +YV AG LGRK G G YDY K
Sbjct: 241 IMDVLYSETGDSKYRPHTLLKKYVRAGWLGRKSGKGFYDYSK 282

[Close]
BLAST of Lsi05G001390 vs. Swiss-Prot
Match: HBD_DEIRA (Probable 3-hydroxybutyryl-CoA dehydrogenase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=hbd PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-63
Identity = 138/276 (50.00%), Postives = 176/276 (63.77%), Query Frame = 1 

Query: 8   GVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSREVGVI 67
           GV+G GQMG GIAQ+AA  G +V + D     L +    I  S+ +L  K  L+ +    
Sbjct: 4   GVIGAGQMGGGIAQVAAQSGFDVVVHDQKQEFLDRGKGVIEKSLGKLHEKGKLT-DAPET 63

Query: 68  ALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSIPITRL 127
            L R+ F+TDL++    D+++EAIVE++ +K  LF +L +I K   ILASNTSSIPIT L
Sbjct: 64  VLGRIHFTTDLQDFADCDLVVEAIVENQQIKNDLFKQLGQIVKPEGILASNTSSIPITAL 123

Query: 128 ASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVICSQDYSG 187
           A+A+ RP Q              LVE++RG  TS++T   +   AE+LGKT +   D+ G
Sbjct: 124 ATASGRPAQFIGMHFMNPVPLMQLVEVIRGYQTSDETARIVTETAEKLGKTPLSCNDFPG 183

Query: 188 FIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLSIMKV 247
           F+ NRILMPM+NEA   +  GVA  E ID  MKLG NHPMGPL LADFIGLD CL+IM+V
Sbjct: 184 FVSNRILMPMLNEAIQCVMEGVAEPEAIDGIMKLGMNHPMGPLTLADFIGLDTCLAIMEV 243

Query: 248 LHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDY 270
           LH GLGD+KY P PLL + V AG LGRK G G Y Y
Sbjct: 244 LHQGLGDDKYRPSPLLRKMVQAGLLGRKSGEGFYKY 278

[Close]
BLAST of Lsi05G001390 vs. Swiss-Prot
Match: HBD_THETC (3-hydroxybutyryl-CoA dehydrogenase OS=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) GN=hbd PE=3 SV=2)

HSP 1 Score: 233.0 bits (593), Expect = 3.9e-60
Identity = 130/281 (46.26%), Postives = 184/281 (65.48%), Query Frame = 1 

Query: 4   IKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSRE 63
           ++ I V+G G MGSGIAQ+ A +G EV L D D   + K   +I  ++QR V K  ++ +
Sbjct: 1   MQKICVIGAGTMGSGIAQVFAQNGFEVILRDIDMKFVEKGFGTIEKNLQRNVDKGKITAD 60

Query: 64  VGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSIP 123
                L R++ +T+L++   AD ++EA +E+ D+K+++F ELD+I K  +ILASNTSS+ 
Sbjct: 61  EKNEILSRIRGTTNLEDAKEADFVVEAAIENMDLKKQIFKELDEICKMETILASNTSSLS 120

Query: 124 ITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVICSQ 183
           IT +ASAT RP++              LVE+++G  TS +TF+ ++ LA ++ KT I  +
Sbjct: 121 ITEIASATKRPEKVIGMHFFNPVPVMKLVEVIKGLKTSEQTFNVVRELALKVDKTPIEVK 180

Query: 184 DYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLS 243
           +  GF+VNRIL+PMINEA   L  GVAT EDID  MKLG NHP+GPL L+D IG DV L+
Sbjct: 181 EAPGFVVNRILIPMINEAIGILADGVATAEDIDEAMKLGANHPIGPLALSDLIGNDVVLA 240

Query: 244 IMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYR 271
           IM VL+   GD+KY P PLL + V  G LGRK G G ++Y+
Sbjct: 241 IMNVLYEEYGDSKYRPHPLLKKMVRGGLLGRKTGKGFFEYK 281

[Close]
BLAST of Lsi05G001390 vs. TrEMBL
Match: A0A0A0L6N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G234000 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 2.3e-139
Identity = 266/296 (89.86%), Postives = 276/296 (93.24%), Query Frame = 1 

Query: 1   MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLL 60
           MTEIKAIGVVGGGQMGSGIAQLAAT+GH+VWLIDSD AALAKA+DSISSSIQRLVS+NLL
Sbjct: 1   MTEIKAIGVVGGGQMGSGIAQLAATYGHQVWLIDSDSAALAKATDSISSSIQRLVSRNLL 60

Query: 61  SREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTS 120
           SRE+G  ALQRLKFSTDLKELHSADVIIEAI+ESEDVKRKLF+ELDKIAKRSSILASNTS
Sbjct: 61  SREIGANALQRLKFSTDLKELHSADVIIEAILESEDVKRKLFVELDKIAKRSSILASNTS 120

Query: 121 SIPITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVI 180
           SIPITRLASATTRP+Q              LVEIVRGADTSN+TFDAIKILAERLGKTVI
Sbjct: 121 SIPITRLASATTRPEQVIGMHFMNPPPVMKLVEIVRGADTSNETFDAIKILAERLGKTVI 180

Query: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240
           CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV
Sbjct: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240

Query: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKR IGVYDYRKLP+  KSKSRL
Sbjct: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRRIGVYDYRKLPEPDKSKSRL 296

[Close]
BLAST of Lsi05G001390 vs. TrEMBL
Match: M5WGP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009256mg PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 7.9e-116
Identity = 223/296 (75.34%), Postives = 254/296 (85.81%), Query Frame = 1 

Query: 1   MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLL 60
           M   K IGVVG GQMGSGIAQLAATHG +VW++D+D  AL++A+ SISSSIQRLVSK  L
Sbjct: 4   MKIFKTIGVVGSGQMGSGIAQLAATHGFDVWVLDTDQDALSRATKSISSSIQRLVSKGQL 63

Query: 61  SREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTS 120
           S+ VG  AL+RL F+++L++L SAD+IIEAIVESEDVK+KLFLELDKI K S+ILASNTS
Sbjct: 64  SQAVGKDALERLWFTSNLEKLSSADIIIEAIVESEDVKKKLFLELDKITKSSAILASNTS 123

Query: 121 SIPITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVI 180
           SI ITRLASAT+RP Q              LVEIVRGADTS++TFDA K LAER GKTVI
Sbjct: 124 SISITRLASATSRPHQVIGMHFMNPPPIMKLVEIVRGADTSDETFDATKALAERFGKTVI 183

Query: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240
           CS+DY+GF+VNRILMPMINEAFFALYTGVATKEDID GM+LGTNHPMGPLELADFIGLDV
Sbjct: 184 CSRDYAGFVVNRILMPMINEAFFALYTGVATKEDIDAGMRLGTNHPMGPLELADFIGLDV 243

Query: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           C+SI+KVLH+GLGDNKYAPCP+LVQYVDAGRLGRKRGIGVYDYR++  SVK  S+L
Sbjct: 244 CVSILKVLHAGLGDNKYAPCPILVQYVDAGRLGRKRGIGVYDYRQMLGSVKPSSKL 299

[Close]
BLAST of Lsi05G001390 vs. TrEMBL
Match: A0A061F847_THECC (3-hydroxyacyl-CoA dehydrogenase family protein isoform 1 OS=Theobroma cacao GN=TCM_031591 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 1.6e-113
Identity = 220/296 (74.32%), Postives = 246/296 (83.11%), Query Frame = 1 

Query: 1   MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLL 60
           M E K + VVG GQMGSGIAQL A HG  VWL+D+DP AL++AS +ISSS+QR VSK  L
Sbjct: 1   MAETKCLAVVGSGQMGSGIAQLGAMHGLHVWLLDTDPVALSRASKAISSSLQRFVSKGQL 60

Query: 61  SREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTS 120
           S+     AL+RL+F+++L+EL SAD IIEAI+ESEDVK+ LFLELDKIAK S+ILASNTS
Sbjct: 61  SQAASTDALRRLQFTSNLEELRSADFIIEAIIESEDVKKTLFLELDKIAKSSAILASNTS 120

Query: 121 SIPITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVI 180
           SI ITRLAS T+RP Q              LVEIVRGADTS++TF A K LAER GKT+I
Sbjct: 121 SISITRLASTTSRPRQVIGMHFMNPPPIMKLVEIVRGADTSDETFHATKALAERFGKTLI 180

Query: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240
           CSQDYSGFIVNRILMPMINEAFF LYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV
Sbjct: 181 CSQDYSGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240

Query: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           CLSIMKVL++GLGD+KYAPCPLLVQYVDAGR+GRK GIGVYDYR+LP S KS  RL
Sbjct: 241 CLSIMKVLNTGLGDSKYAPCPLLVQYVDAGRIGRKCGIGVYDYRRLPASKKSSPRL 296

[Close]
BLAST of Lsi05G001390 vs. TrEMBL
Match: B0M194_SOYBN (Peroxisomal 3-hydroxyacyl-CoA dehydrogenase-like protein OS=Glycine max GN=GLYMA_06G254700 PE=2 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 2.8e-113
Identity = 220/296 (74.32%), Postives = 247/296 (83.45%), Query Frame = 1 

Query: 1   MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLL 60
           M E+K IGVVG GQMGSGIAQ+AA HG +VWL D DP AL+KAS SISSSI R VSKN +
Sbjct: 24  MLEVKRIGVVGSGQMGSGIAQVAAMHGIDVWLHDLDPQALSKASSSISSSINRFVSKNHI 83

Query: 61  SREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTS 120
           S+  G  AL+RL+ +TDL++L  AD+IIEAIVESEDVK+ LF +LD+IAK S+ILASNTS
Sbjct: 84  SQVAGADALKRLRLTTDLEDLQLADLIIEAIVESEDVKKSLFAQLDRIAKSSAILASNTS 143

Query: 121 SIPITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVI 180
           SI +TRLA++T+RP Q              L+EIVRGADTS +TF A K L+ERLGK VI
Sbjct: 144 SISVTRLATSTSRPRQVIGMHFMNPPPVMKLIEIVRGADTSEETFVATKALSERLGKVVI 203

Query: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240
            S DYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV
Sbjct: 204 TSHDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 263

Query: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           CLSIM+VLH+GLGDNKYAPCPLLVQYVDAGRLGRKRGIGVY+Y K P+S KS SRL
Sbjct: 264 CLSIMRVLHAGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYEYSKDPRSTKSSSRL 319

[Close]
BLAST of Lsi05G001390 vs. TrEMBL
Match: V4ULA7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009049mg PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 8.1e-113
Identity = 213/294 (72.45%), Postives = 249/294 (84.69%), Query Frame = 1 

Query: 3   EIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSR 62
           ++K +GVVG GQMGSGIAQL   HG +VWL+D+DP AL +A+ SISSSIQ+ VSK  LS+
Sbjct: 4   KMKVMGVVGSGQMGSGIAQLGVMHGLDVWLVDTDPDALVRATKSISSSIQKFVSKGQLSQ 63

Query: 63  EVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSI 122
            VG  A +RL+ +++LK+LHSAD+I+EAIVESEDVK+KLF ELDKI K S+ILASNTSSI
Sbjct: 64  AVGTDAPRRLRCTSNLKDLHSADIIVEAIVESEDVKKKLFSELDKITKASAILASNTSSI 123

Query: 123 PITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVICS 182
            ITRLASAT+RP Q              LVE++RGADTS++TF A K LAER GKTV+CS
Sbjct: 124 SITRLASATSRPCQVIGMHFMNPPPLMKLVEVIRGADTSDETFRATKALAERFGKTVVCS 183

Query: 183 QDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCL 242
           QDY+GFIVNRILMPMINEAFF LYTGVATKEDID GMKLGTN PMGPL+LADFIGLDVCL
Sbjct: 184 QDYAGFIVNRILMPMINEAFFTLYTGVATKEDIDAGMKLGTNQPMGPLQLADFIGLDVCL 243

Query: 243 SIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           SIMKVLH+GLGD+KYAPCPLLVQYVDAGRLG+KRGIGV+DYR++P+SVK  +RL
Sbjct: 244 SIMKVLHTGLGDSKYAPCPLLVQYVDAGRLGKKRGIGVFDYRRVPESVKPNARL 297

[Close]
BLAST of Lsi05G001390 vs. TAIR10
Match: AT3G15290.1 (AT3G15290.1 3-hydroxyacyl-CoA dehydrogenase family protein)

HSP 1 Score: 399.1 bits (1024), Expect = 2.3e-111
Identity = 204/293 (69.62%), Postives = 244/293 (83.28%), Query Frame = 1 

Query: 1   MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLL 60
           M E+K++GVVG GQMGSGIAQLAAT G +VWL+D+D  AL++A+ +ISSS++R VSK L+
Sbjct: 1   MAEMKSVGVVGAGQMGSGIAQLAATSGLDVWLMDADRDALSRATAAISSSVKRFVSKGLI 60

Query: 61  SREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTS 120
           S+EVG  A+ RL+ +++L++L SAD+I+EAIVESED+K+KLF +LD IAK S+ILASNTS
Sbjct: 61  SKEVGDDAMHRLRLTSNLEDLCSADIIVEAIVESEDIKKKLFKDLDGIAKSSAILASNTS 120

Query: 121 SIPITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVI 180
           SI ITRLASAT RP Q              LVEI+RGADTS +TF A K+LAER GKT +
Sbjct: 121 SISITRLASATRRPSQVIGMHFMNPPPIMKLVEIIRGADTSEETFLATKVLAERFGKTTV 180

Query: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240
           CSQDY+GF+VNRILMPMINEAF  LYTGVATKEDID+GMK GTNHPMGPLELAD IGLDV
Sbjct: 181 CSQDYAGFVVNRILMPMINEAFHTLYTGVATKEDIDSGMKHGTNHPMGPLELADLIGLDV 240

Query: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSK 280
           CLS+MKVLH GLGD+KYAPCPLLVQYVDAGRLGRKRG+GVYDYR+  Q +  +
Sbjct: 241 CLSVMKVLHEGLGDSKYAPCPLLVQYVDAGRLGRKRGVGVYDYREATQKLSPR 293

[Close]
BLAST of Lsi05G001390 vs. TAIR10
Match: AT3G06860.1 (AT3G06860.1 multifunctional protein 2)

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-24
Identity = 83/286 (29.02%), Postives = 137/286 (47.90%), Query Frame = 1 

Query: 3   EIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSR 62
           +IK + ++GGG MGSGIA       + V L + +   L      + +++Q  V K  +S+
Sbjct: 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQ 370

Query: 63  EVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSI 122
           E     +  LK S D +     D++IEA++E+  +K+++F +L+K   +  ILASNTS+I
Sbjct: 371 EKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTI 430

Query: 123 PITRLASATTRPDQLV--------------EIVRGADTSNKTFDAIKILAERLGKTVICS 182
            + ++   T   D++V              EIVR   TS +    +  + +++ KT +  
Sbjct: 431 DLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVV 490

Query: 183 QDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGM-KLGTNHPMGPLELADFIGLDVC 242
            + +GF VNR+  P    A F +  G A    ID  + K G   PMGP  L D +G  V 
Sbjct: 491 GNCTGFAVNRMFFPYTQAAMFLVECG-ADPYLIDRAISKFGM--PMGPFRLCDLVGFGVA 550

Query: 243 LSIMKVLHSGLGDNKYAP--CPLLVQYVDAGRLGRKRGIGVYDYRK 272
           ++          +  Y     PL+ +   AG   RK G  +YD ++
Sbjct: 551 IATATQFIENFSERTYKSMIIPLMQEDKRAGEATRK-GFYLYDDKR 592

[Close]
BLAST of Lsi05G001390 vs. TAIR10
Match: AT4G29010.1 (AT4G29010.1 Enoyl-CoA hydratase/isomerase family)

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-24
Identity = 81/282 (28.72%), Postives = 130/282 (46.10%), Query Frame = 1 

Query: 4   IKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSRE 63
           IK + V+GGG MGSGIA         V L + +   L K   S+ ++++ LVS+  L+++
Sbjct: 309 IKKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLTQD 368

Query: 64  VGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSIP 123
               AL   K   D  E +  D++IEA++E+  +K+ +F E++K+     ILASNTS+I 
Sbjct: 369 KAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTSTID 428

Query: 124 ITRLASATTRPDQLV--------------EIVRGADTSNKTFDAIKILAERLGKTVICSQ 183
           +  +   T   D++V              EIVR  +TS +    +  + + + K  +   
Sbjct: 429 LDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQVILDLMAVGKAIKKVPVVVG 488

Query: 184 DYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCLS 243
           +  GF VNR   P    A      GV            G   P+GP +L D  G  + L+
Sbjct: 489 NCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSVITSFGL--PLGPFQLGDLAGHGIGLA 548

Query: 244 IMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRK 272
           +  +     GD  +   P+    + +GR G+  G G Y Y K
Sbjct: 549 VGPIYAKVYGDRMFR-SPMTELLLKSGRNGKINGRGYYIYEK 587

[Close]
BLAST of Lsi05G001390 vs. NCBI nr
Match: gi|659112010|ref|XP_008456022.1| (PREDICTED: hydroxyacyl-coenzyme A dehydrogenase, mitochondrial [Cucumis melo])

HSP 1 Score: 506.1 bits (1302), Expect = 3.9e-140
Identity = 267/296 (90.20%), Postives = 275/296 (92.91%), Query Frame = 1 

Query: 1   MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLL 60
           MTEIKAIGVVGGGQMGSGIAQLAATHGH+VWLIDSDPAALAKA+DSISSSIQRLVS+NLL
Sbjct: 14  MTEIKAIGVVGGGQMGSGIAQLAATHGHQVWLIDSDPAALAKATDSISSSIQRLVSRNLL 73

Query: 61  SREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTS 120
           SRE+G IALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLF+ELDKIAKRSSILASNTS
Sbjct: 74  SREIGAIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFVELDKIAKRSSILASNTS 133

Query: 121 SIPITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVI 180
           SIPITRLASATTRP+Q              LVEIVRGADTS++TFDAIKILAERLGKTVI
Sbjct: 134 SIPITRLASATTRPEQVIGMHFMNPPPIMKLVEIVRGADTSDETFDAIKILAERLGKTVI 193

Query: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240
           CSQDYSGFIVNRILMPMINEAFF LYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV
Sbjct: 194 CSQDYSGFIVNRILMPMINEAFFTLYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 253

Query: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           CLSIMKVLHSGLGDNKYAPCPLLVQY DAGRLGRKRGIGVYDYRK P   KSKSRL
Sbjct: 254 CLSIMKVLHSGLGDNKYAPCPLLVQYADAGRLGRKRGIGVYDYRKQPLLGKSKSRL 309

[Close]
BLAST of Lsi05G001390 vs. NCBI nr
Match: gi|449457019|ref|XP_004146246.1| (PREDICTED: hydroxyacyl-coenzyme A dehydrogenase, mitochondrial [Cucumis sativus])

HSP 1 Score: 503.1 bits (1294), Expect = 3.3e-139
Identity = 266/296 (89.86%), Postives = 276/296 (93.24%), Query Frame = 1 

Query: 1   MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLL 60
           MTEIKAIGVVGGGQMGSGIAQLAAT+GH+VWLIDSD AALAKA+DSISSSIQRLVS+NLL
Sbjct: 1   MTEIKAIGVVGGGQMGSGIAQLAATYGHQVWLIDSDSAALAKATDSISSSIQRLVSRNLL 60

Query: 61  SREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTS 120
           SRE+G  ALQRLKFSTDLKELHSADVIIEAI+ESEDVKRKLF+ELDKIAKRSSILASNTS
Sbjct: 61  SREIGANALQRLKFSTDLKELHSADVIIEAILESEDVKRKLFVELDKIAKRSSILASNTS 120

Query: 121 SIPITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVI 180
           SIPITRLASATTRP+Q              LVEIVRGADTSN+TFDAIKILAERLGKTVI
Sbjct: 121 SIPITRLASATTRPEQVIGMHFMNPPPVMKLVEIVRGADTSNETFDAIKILAERLGKTVI 180

Query: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240
           CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV
Sbjct: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240

Query: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKR IGVYDYRKLP+  KSKSRL
Sbjct: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRRIGVYDYRKLPEPDKSKSRL 296

[Close]
BLAST of Lsi05G001390 vs. NCBI nr
Match: gi|658029110|ref|XP_008349997.1| (PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Malus domestica])

HSP 1 Score: 426.4 bits (1095), Expect = 3.9e-116
Identity = 219/294 (74.49%), Postives = 256/294 (87.07%), Query Frame = 1 

Query: 3   EIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLLSR 62
           + K IGVVG GQMGSGIAQLAAT+G +VWL+D+DP AL++A+ SISSSIQRLVSK  LS+
Sbjct: 6   KFKTIGVVGSGQMGSGIAQLAATYGFDVWLLDTDPEALSRATKSISSSIQRLVSKGQLSQ 65

Query: 63  EVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTSSI 122
           +V   AL+RL+++++++   SAD+IIEAIVESEDVK+KLFL+LDKIAKRS+ILASNTSSI
Sbjct: 66  DVRKDALERLQYTSNVENFCSADIIIEAIVESEDVKKKLFLQLDKIAKRSAILASNTSSI 125

Query: 123 PITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVICS 182
            ITRLASAT+RP Q              LVEIVRGADTS++TFD  K LAER GKTVICS
Sbjct: 126 SITRLASATSRPHQVIGMHFMNPPPIMKLVEIVRGADTSDETFDITKALAERFGKTVICS 185

Query: 183 QDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDVCL 242
           +DY+GF+VNRILMPMINEAF+ALYTGVATKEDID GMKLGTNHPMGPLELADFIGLD+CL
Sbjct: 186 RDYAGFVVNRILMPMINEAFYALYTGVATKEDIDAGMKLGTNHPMGPLELADFIGLDICL 245

Query: 243 SIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           SI++VLH+GLGDNKYAPCP+LVQYVDAGRLGRKRGIGVYDYR+ P+SVK  S+L
Sbjct: 246 SILRVLHAGLGDNKYAPCPILVQYVDAGRLGRKRGIGVYDYRQTPESVKPSSKL 299

[Close]
BLAST of Lsi05G001390 vs. NCBI nr
Match: gi|470120898|ref|XP_004296524.1| (PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Fragaria vesca subsp. vesca])

HSP 1 Score: 426.4 bits (1095), Expect = 3.9e-116
Identity = 221/296 (74.66%), Postives = 254/296 (85.81%), Query Frame = 1 

Query: 1   MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLL 60
           ++E+K I VVGGGQMGSGIAQLAA HG + WL+D+DP+AL +AS SISSSIQRLVSK  L
Sbjct: 2   ISEMKTIAVVGGGQMGSGIAQLAAMHGCDAWLLDTDPSALTRASKSISSSIQRLVSKGQL 61

Query: 61  SREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTS 120
           ++ VG  AL RL+++++L+EL SADVIIEAIVESEDVK+KLF+E+DKI K S+ILASNTS
Sbjct: 62  TQAVGKDALGRLRYTSNLQELSSADVIIEAIVESEDVKKKLFIEIDKITKSSAILASNTS 121

Query: 121 SIPITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVI 180
           SI ITRLASAT+RP Q              LVEIVRGADTS++TF A K LAER GKTVI
Sbjct: 122 SISITRLASATSRPKQVIGMHFMNPPPIMKLVEIVRGADTSDETFHATKTLAERFGKTVI 181

Query: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240
           CS+DY+GF+VNRILMPMINEAFF LYTGVATKEDID GMKLGTNHPMGPLELADFIGLDV
Sbjct: 182 CSRDYAGFVVNRILMPMINEAFFTLYTGVATKEDIDVGMKLGTNHPMGPLELADFIGLDV 241

Query: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           CLSIMKVLH+ LGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYR++P+++K   +L
Sbjct: 242 CLSIMKVLHADLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRQMPKAIKPSPKL 297

[Close]
BLAST of Lsi05G001390 vs. NCBI nr
Match: gi|645240165|ref|XP_008226480.1| (PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Prunus mume])

HSP 1 Score: 424.9 bits (1091), Expect = 1.1e-115
Identity = 222/296 (75.00%), Postives = 253/296 (85.47%), Query Frame = 1 

Query: 1   MTEIKAIGVVGGGQMGSGIAQLAATHGHEVWLIDSDPAALAKASDSISSSIQRLVSKNLL 60
           M   K IGVVG GQMGSGIAQLAATHG +VW++D+D  AL++A+ SISSSIQRLVSK  L
Sbjct: 4   MKSFKTIGVVGSGQMGSGIAQLAATHGFDVWVLDTDQDALSRATKSISSSIQRLVSKGQL 63

Query: 61  SREVGVIALQRLKFSTDLKELHSADVIIEAIVESEDVKRKLFLELDKIAKRSSILASNTS 120
           S+ VG  AL+RL F+++L++L SAD+IIEAIVESEDVK+KLFLELDKI K S+ILASNTS
Sbjct: 64  SQAVGKDALERLWFTSNLEKLSSADIIIEAIVESEDVKKKLFLELDKITKSSAILASNTS 123

Query: 121 SIPITRLASATTRPDQ--------------LVEIVRGADTSNKTFDAIKILAERLGKTVI 180
           SI ITRLASAT+RP Q              LVEIVRGADTS++TFDA K LAER GKT+I
Sbjct: 124 SISITRLASATSRPHQVIGMHFMNPPPIMKLVEIVRGADTSDETFDATKALAERFGKTII 183

Query: 181 CSQDYSGFIVNRILMPMINEAFFALYTGVATKEDIDTGMKLGTNHPMGPLELADFIGLDV 240
           CS+DY+GF+VNRILMPMINEAFFALYTGVATKEDID GMKLGTNHPMGPLELADFIGLDV
Sbjct: 184 CSRDYAGFVVNRILMPMINEAFFALYTGVATKEDIDAGMKLGTNHPMGPLELADFIGLDV 243

Query: 241 CLSIMKVLHSGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYDYRKLPQSVKSKSRL 283
           C+SI+KVLH+GLGDNKYAPCP+LVQYVDAGRLGRKRGIGVYDYR++  SV   S+L
Sbjct: 244 CVSILKVLHAGLGDNKYAPCPILVQYVDAGRLGRKRGIGVYDYRQMLGSVNPSSKL 299

The following BLAST results are available for this feature:
BLAST of Lsi05G001390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HBD_BRADU2.2e-7152.313-hydroxybutyryl-CoA dehydrogenase OS=Bradyrhizobium diazoefficiens (strain JCM ... [more]
HBD_BACSU6.3e-6649.12Probable 3-hydroxybutyryl-CoA dehydrogenase OS=Bacillus subtilis (strain 168) GN... [more]
HBD_CLOAB7.7e-6448.943-hydroxybutyryl-CoA dehydrogenase OS=Clostridium acetobutylicum (strain ATCC 82... [more]
HBD_DEIRA1.3e-6350.00Probable 3-hydroxybutyryl-CoA dehydrogenase OS=Deinococcus radiodurans (strain A... [more]
HBD_THETC3.9e-6046.263-hydroxybutyryl-CoA dehydrogenase OS=Thermoanaerobacterium thermosaccharolyticu... [more]
BLAST of Lsi05G001390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6N5_CUCSA2.3e-13989.86Uncharacterized protein OS=Cucumis sativus GN=Csa_3G234000 PE=4 SV=1[more]
M5WGP6_PRUPE7.9e-11675.34Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009256mg PE=4 SV=1[more]
A0A061F847_THECC1.6e-11374.323-hydroxyacyl-CoA dehydrogenase family protein isoform 1 OS=Theobroma cacao GN=T... [more]
B0M194_SOYBN2.8e-11374.32Peroxisomal 3-hydroxyacyl-CoA dehydrogenase-like protein OS=Glycine max GN=GLYMA... [more]
V4ULA7_9ROSI8.1e-11372.45Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009049mg PE=4 SV=1[more]
BLAST of Lsi05G001390 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G15290.12.3e-11169.62 3-hydroxyacyl-CoA dehydrogenase family protein[more]
AT3G06860.12.8e-2429.02 multifunctional protein 2[more]
AT4G29010.13.7e-2428.72 Enoyl-CoA hydratase/isomerase family[more]
BLAST of Lsi05G001390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659112010|ref|XP_008456022.1|3.9e-14090.20PREDICTED: hydroxyacyl-coenzyme A dehydrogenase, mitochondrial [Cucumis melo][more]
gi|449457019|ref|XP_004146246.1|3.3e-13989.86PREDICTED: hydroxyacyl-coenzyme A dehydrogenase, mitochondrial [Cucumis sativus][more]
gi|658029110|ref|XP_008349997.1|3.9e-11674.49PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Malus domestica][more]
gi|470120898|ref|XP_004296524.1|3.9e-11674.66PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Fragaria vesca subs... [more]
gi|645240165|ref|XP_008226480.1|1.1e-11575.00PREDICTED: probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0070403NAD+ binding
GO:0016491oxidoreductase activity
GO:00038573-hydroxyacyl-CoA dehydrogenase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006631fatty acid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR0226943-OHacyl-CoA_DH
IPR016040NAD(P)-bd_dom
IPR0133286PGD_dom2
IPR0089276-PGluconate_DH-like_C_sf
IPR0061803-OHacyl-CoA_DH_CS
IPR0061763-OHacyl-CoA_DH_NAD-bd
IPR0061083HC_DH_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0018874 benzoate metabolic process
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0006550 isoleucine catabolic process
biological_process GO:0006552 leucine catabolic process
biological_process GO:0006554 lysine catabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0006574 valine catabolic process
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0009853 photorespiration
biological_process GO:0046685 response to arsenic-containing substance
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005777 peroxisome
molecular_function GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity
molecular_function GO:0015297 antiporter activity
molecular_function GO:0015238 drug transmembrane transporter activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0070403 NAD+ binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G001390.1Lsi05G001390.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0061083-hydroxyacyl-CoA dehydrogenase, C-terminalPFAMPF007253HCDHcoord: 173..269
score: 4.1
IPR0061763-hydroxyacyl-CoA dehydrogenase, NAD bindingPFAMPF027373HCDH_Ncoord: 7..170
score: 7.0
IPR0061803-hydroxyacyl-CoA dehydrogenase, conserved sitePROSITEPS000673HCDHcoord: 170..195
scor
IPR0089276-phosphogluconate dehydrogenase C-terminal domain-likeunknownSSF481796-phosphogluconate dehydrogenase C-terminal domain-likecoord: 173..271
score: 2.81
IPR0133286-phosphogluconate dehydrogenase, domain 2GENE3DG3DSA:1.10.1040.10coord: 175..270
score: 1.9
IPR016040NAD(P)-binding domainGENE3DG3DSA:3.40.50.720coord: 2..174
score: 6.4
IPR016040NAD(P)-binding domainunknownSSF51735NAD(P)-binding Rossmann-fold domainscoord: 1..171
score: 4.35
IPR0226943-hydroxyacyl-CoA dehydrogenasePIRPIRSF000105HCDHcoord: 1..281
score: 3.5
NoneNo IPR availablePANTHERPTHR233093-HYDROXYACYL-COA DEHYROGENASEcoord: 1..271
score: 2.3E