Cla003910 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCTCACCCAAAAATAGCCATCGCCGCCGTTCTCCTAGCCTTCATCATCGCTGTCCTCCCGCCGGCTACAAGGTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCCACCGGCCCCGGCACCGCCACGCCGACGACTCCATCTCCGCCGTCTCAAACAGGCTATGGATCCTATTCTCCTCCGGCTTACTACTCTCCGCCGGCTGCTTATTATCCATATAACCCGCCACCGTCCGGCGGCGACAGCTTCGACGGCGTCACTCCACCGCCGCCGGACCCGATTCTGCCGTATTTCCCTTATTACTATAAGAAGCCTCCTCACAAACCGGACGATGAGTCGGGTGGCTCCGCCGTCGCCGGACGGAAATCTGAGATCGGGATGATCGCCGGAACTTTTGTATTTATTTTTCTCTCTCTCTTCTTCATTTTGATGTAA ATGGCTCCTCACCCAAAAATAGCCATCGCCGCCGTTCTCCTAGCCTTCATCATCGCTGTCCTCCCGCCGGCTACAAGGTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCCACCGGCCCCGGCACCGCCACGCCGACGACTCCATCTCCGCCGTCTCAAACAGGCTATGGATCCTATTCTCCTCCGGCTTACTACTCTCCGCCGGCTGCTTATTATCCATATAACCCGCCACCGTCCGGCGGCGACAGCTTCGACGGCGTCACTCCACCGCCGCCGGACCCGATTCTGCCGTATTTCCCTTATTACTATAAGAAGCCTCCTCACAAACCGGACGATGAGTCGGGTGGCTCCGCCGTCGCCGGACGGAAATCTGAGATCGGGATGATCGCCGGAACTTTTGTATTTATTTTTCTCTCTCTCTTCTTCATTTTGATGTAA ATGGCTCCTCACCCAAAAATAGCCATCGCCGCCGTTCTCCTAGCCTTCATCATCGCTGTCCTCCCGCCGGCTACAAGGTCCGACGACACCTGCCCATATCCCTGCTACCCTCCGCCCACCGGCCCCGGCACCGCCACGCCGACGACTCCATCTCCGCCGTCTCAAACAGGCTATGGATCCTATTCTCCTCCGGCTTACTACTCTCCGCCGGCTGCTTATTATCCATATAACCCGCCACCGTCCGGCGGCGACAGCTTCGACGGCGTCACTCCACCGCCGCCGGACCCGATTCTGCCGTATTTCCCTTATTACTATAAGAAGCCTCCTCACAAACCGGACGATGAGTCGGGTGGCTCCGCCGTCGCCGGACGGAAATCTGAGATCGGGATGATCGCCGGAACTTTTGTATTTATTTTTCTCTCTCTCTTCTTCATTTTGATGTAA MAPHPKIAIAAVLLAFIIAVLPPATRSDDTCPYPCYPPPTGPGTATPTTPSPPSQTGYGSYSPPAYYSPPAAYYPYNPPPSGGDSFDGVTPPPPDPILPYFPYYYKKPPHKPDDESGGSAVAGRKSEIGMIAGTFVFIFLSLFFILM
BLAST of Cla003910 vs. Swiss-Prot
Match: INF2_HUMAN (Inverted formin-2 OS=Homo sapiens GN=INF2 PE=1 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 2.2e-06 Identity = 35/96 (36.46%), Postives = 39/96 (40.62%), Query Frame = 1
BLAST of Cla003910 vs. Swiss-Prot
Match: LRX5_ARATH (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana GN=LRX5 PE=2 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 6.5e-06 Identity = 39/109 (35.78%), Postives = 42/109 (38.53%), Query Frame = 1
BLAST of Cla003910 vs. TrEMBL
Match: A0A0A0KUZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G576580 PE=4 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 2.9e-69 Identity = 125/148 (84.46%), Postives = 131/148 (88.51%), Query Frame = 1
BLAST of Cla003910 vs. TrEMBL
Match: V4UGT7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017051mg PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.9e-28 Identity = 69/149 (46.31%), Postives = 89/149 (59.73%), Query Frame = 1
BLAST of Cla003910 vs. TrEMBL
Match: A0A067KPH5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04690 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.7e-27 Identity = 76/143 (53.15%), Postives = 92/143 (64.34%), Query Frame = 1
BLAST of Cla003910 vs. TrEMBL
Match: B9HJA6_POPTR (Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0008s12810g PE=4 SV=2) HSP 1 Score: 129.0 bits (323), Expect = 4.6e-27 Identity = 65/141 (46.10%), Postives = 85/141 (60.28%), Query Frame = 1
BLAST of Cla003910 vs. TrEMBL
Match: V7CHY2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G093200g PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.0e-26 Identity = 69/156 (44.23%), Postives = 87/156 (55.77%), Query Frame = 1
BLAST of Cla003910 vs. NCBI nr
Match: gi|659072902|ref|XP_008467157.1| (PREDICTED: extensin [Cucumis melo]) HSP 1 Score: 278.9 bits (712), Expect = 5.2e-72 Identity = 127/140 (90.71%), Postives = 132/140 (94.29%), Query Frame = 1
BLAST of Cla003910 vs. NCBI nr
Match: gi|778704056|ref|XP_011655467.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Cucumis sativus]) HSP 1 Score: 269.2 bits (687), Expect = 4.1e-69 Identity = 125/148 (84.46%), Postives = 131/148 (88.51%), Query Frame = 1
BLAST of Cla003910 vs. NCBI nr
Match: gi|567911925|ref|XP_006448276.1| (hypothetical protein CICLE_v10017051mg [Citrus clementina]) HSP 1 Score: 133.7 bits (335), Expect = 2.7e-28 Identity = 69/149 (46.31%), Postives = 89/149 (59.73%), Query Frame = 1
BLAST of Cla003910 vs. NCBI nr
Match: gi|568829715|ref|XP_006469164.1| (PREDICTED: extensin-like [Citrus sinensis]) HSP 1 Score: 132.5 bits (332), Expect = 6.0e-28 Identity = 68/149 (45.64%), Postives = 89/149 (59.73%), Query Frame = 1
BLAST of Cla003910 vs. NCBI nr
Match: gi|1021506389|ref|XP_016196587.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Arachis ipaensis]) HSP 1 Score: 131.7 bits (330), Expect = 1.0e-27 Identity = 71/149 (47.65%), Postives = 86/149 (57.72%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |