Cla003430 (gene) Watermelon (97103) v1

NameCla003430
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionECA1 protein (AHRD V1 ***- Q9SES8_HORVU); contains Interpro domain(s) IPR010701 Protein of unknown function DUF1278
LocationChr1 : 12959265 .. 12959615 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGAATCAAGATCAAACCCTACAACGAGTTTAGAAGAACGACTTAAGTTGAATGGCGAGACATTAGATTGCTGGGGAACTTTGCACAAACTTCAAGCATGCACGGGTGAAGTTATCACATTTTTTCTTACTGGTGAAACTTATTTAGGTTCCAACTGTTGTCAAGCTATTAAAATCATTCAACATGAGTGTTGGCCAACATTGCTTGGATCTTTGGGATATACGACAGAAGAAGGTGACATACTTGAAGCCTATTGTGATACCACTATTGATGGTCTTACAACACTGTCATCTCCTCTATCGTTCTTTATCGAACAAAACGCAGTAACTAAAATTGTTACTCCATGA

mRNA sequence

ATGGTCGAATCAAGATCAAACCCTACAACGAGTTTAGAAGAACGACTTAAGTTGAATGGCGAGACATTAGATTGCTGGGGAACTTTGCACAAACTTCAAGCATGCACGGGTGAAGTTATCACATTTTTTCTTACTGGTGAAACTTATTTAGGTTCCAACTGTTGTCAAGCTATTAAAATCATTCAACATGAGTGTTGGCCAACATTGCTTGGATCTTTGGGATATACGACAGAAGAAGGTGACATACTTGAAGCCTATTGTGATACCACTATTGATGGTCTTACAACACTGTCATCTCCTCTATCGTTCTTTATCGAACAAAACGCAGTAACTAAAATTGTTACTCCATGA

Coding sequence (CDS)

ATGGTCGAATCAAGATCAAACCCTACAACGAGTTTAGAAGAACGACTTAAGTTGAATGGCGAGACATTAGATTGCTGGGGAACTTTGCACAAACTTCAAGCATGCACGGGTGAAGTTATCACATTTTTTCTTACTGGTGAAACTTATTTAGGTTCCAACTGTTGTCAAGCTATTAAAATCATTCAACATGAGTGTTGGCCAACATTGCTTGGATCTTTGGGATATACGACAGAAGAAGGTGACATACTTGAAGCCTATTGTGATACCACTATTGATGGTCTTACAACACTGTCATCTCCTCTATCGTTCTTTATCGAACAAAACGCAGTAACTAAAATTGTTACTCCATGA

Protein sequence

MVESRSNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKIIQHECWPTLLGSLGYTTEEGDILEAYCDTTIDGLTTLSSPLSFFIEQNAVTKIVTP
BLAST of Cla003430 vs. Swiss-Prot
Match: EC11_ARATH (Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.2e-24
Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 1

Query: 6   SNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKIIQHEC 65
           S+PTTSL  RLKL+ +T  CW +L +LQ C+GE+I FFL GETY+G  CC AI+ I  +C
Sbjct: 38  SSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKC 97

Query: 66  WPTLLGSLGYTTEEGDILEAYCD 89
           WPT++G LG+T +EGD+L+ YCD
Sbjct: 98  WPTMIGVLGFTAQEGDMLQGYCD 120

BLAST of Cla003430 vs. Swiss-Prot
Match: EC12_ARATH (Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.8e-18
Identity = 36/85 (42.35%), Postives = 58/85 (68.24%), Query Frame = 1

Query: 9   TTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKIIQHECWPT 68
           +T++  RL   G  ++CW  L++L++CT E++ FFL GET LG +CCQA+++I  +CWP 
Sbjct: 31  STNIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPA 90

Query: 69  LLGSLGYTTEEGDILEAYCDTTIDG 94
           +L SLG+T++E ++L  +C +   G
Sbjct: 91  MLTSLGFTSDETNVLRGFCQSPNSG 114

BLAST of Cla003430 vs. Swiss-Prot
Match: EC14_ARATH (Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1

Query: 9   TTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKIIQHECWPT 68
           +T++  RL+ +G  ++CW  L++L++CT E++ FFL GET LG +CC+++ II   CWP 
Sbjct: 33  STNIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPA 92

Query: 69  LLGSLGYTTEEGDILEAYCDTTIDG 94
           +L SLG+T EE ++L  +C     G
Sbjct: 93  MLTSLGFTPEEANVLRGFCQNPNSG 116

BLAST of Cla003430 vs. Swiss-Prot
Match: EC13_ARATH (Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 4.9e-17
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 1

Query: 2   VESRSNP----TTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQA 61
           V SR+ P    +T++  RL   G  + CW  L++L++CT E++ FFL GET LG  CC A
Sbjct: 20  VSSRALPPVADSTNIAARLT-GGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNA 79

Query: 62  IKIIQHECWPTLLGSLGYTTEEGDILEAYCDTTIDG 94
           + +I  +CWP +L SLG+T EE ++L  +C +   G
Sbjct: 80  VDVITTDCWPAMLTSLGFTLEETNVLRGFCQSPNSG 114

BLAST of Cla003430 vs. Swiss-Prot
Match: EC15_ARATH (Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.9e-09
Identity = 29/77 (37.66%), Postives = 42/77 (54.55%), Query Frame = 1

Query: 20  GETLDCWGTLHKLQACTGEVITFFL--TGETY------LGSNCCQAIKIIQHECWPTLLG 79
           G  +DCW    +L++CT E++ FFL  TG +       +  +CC AI ++  +CW  +  
Sbjct: 48  GNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMFT 107

Query: 80  SLGYTTEEGDILEAYCD 89
           SLG TT EG+ L  YC+
Sbjct: 108 SLGLTTMEGNNLREYCE 124

BLAST of Cla003430 vs. TrEMBL
Match: A0A0A0LVH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124010 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.4e-47
Identity = 91/116 (78.45%), Postives = 100/116 (86.21%), Query Frame = 1

Query: 1   MVESRSNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKI 60
           MVESR +P TSL  RLKL+ ET DCWGTLH+LQACTGEV+TFFLTGETYLGSNCCQAIK+
Sbjct: 1   MVESRPDPKTSLATRLKLDSETSDCWGTLHELQACTGEVVTFFLTGETYLGSNCCQAIKV 60

Query: 61  IQHECWPTLLGSLGYTTEEGDILEAYCDTTIDGLTTLSSPLSFFIEQNAVTKIVTP 117
           IQHECWPTLL SLGYTTEEGD+LEAYCDTTID + T SSPLS  IEQN + K + P
Sbjct: 61  IQHECWPTLLASLGYTTEEGDVLEAYCDTTIDTIKTSSSPLSLSIEQNNMPKSIAP 116

BLAST of Cla003430 vs. TrEMBL
Match: A0A0A0LSR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124020 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.0e-37
Identity = 77/101 (76.24%), Postives = 86/101 (85.15%), Query Frame = 1

Query: 2   VESRSNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKII 61
           VES  NP +SL  R+KL GET DCWG+L++LQACTGEVITFFL+GE YLG  CCQAI+ I
Sbjct: 22  VESSPNPKSSLATRIKLEGETSDCWGSLYELQACTGEVITFFLSGEAYLGVKCCQAIRTI 81

Query: 62  QHECWPTLLGSLGYTTEEGDILEAYCDTT--IDGLTTLSSP 101
           QHECWPTLLGSLGYTTEEGDILEAYCDTT  +D L T+SSP
Sbjct: 82  QHECWPTLLGSLGYTTEEGDILEAYCDTTVDVDRLFTISSP 122

BLAST of Cla003430 vs. TrEMBL
Match: K7N3Y2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G168300 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.0e-29
Identity = 64/117 (54.70%), Postives = 85/117 (72.65%), Query Frame = 1

Query: 4   SRSNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKIIQH 63
           S S+  TSL  RLKL+GE+ +CW +L +LQACTGEVITFFL GETYLG +CCQAI+I+ H
Sbjct: 25  SSSSSNTSLVARLKLDGESSNCWDSLFELQACTGEVITFFLNGETYLGPSCCQAIRIVGH 84

Query: 64  ECWPTLLGSLGYTTEEGDILEAYCDTTIDGLTTLSSPLS----FFIEQNAVTKIVTP 117
           +CWP ++ SLG+TTEEGD+L+ YCD+  + L +  SP S         +A TK++ P
Sbjct: 85  DCWPDMIASLGFTTEEGDVLQGYCDSEKEQLHSPPSPTSPTTVVHDFDDATTKVLLP 141

BLAST of Cla003430 vs. TrEMBL
Match: A0A0B2SQ80_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_031725 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.0e-29
Identity = 64/117 (54.70%), Postives = 85/117 (72.65%), Query Frame = 1

Query: 4   SRSNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKIIQH 63
           S S+  TSL  RLKL+GE+ +CW +L +LQACTGEVITFFL GETYLG +CCQAI+I+ H
Sbjct: 7   SSSSSNTSLVARLKLDGESSNCWDSLFELQACTGEVITFFLNGETYLGPSCCQAIRIVGH 66

Query: 64  ECWPTLLGSLGYTTEEGDILEAYCDTTIDGLTTLSSPLS----FFIEQNAVTKIVTP 117
           +CWP ++ SLG+TTEEGD+L+ YCD+  + L +  SP S         +A TK++ P
Sbjct: 67  DCWPDMIASLGFTTEEGDVLQGYCDSEKEQLHSPPSPTSPTTVVHDFDDATTKVLLP 123

BLAST of Cla003430 vs. TrEMBL
Match: A0A0B2S0S1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014832 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.8e-27
Identity = 56/94 (59.57%), Postives = 73/94 (77.66%), Query Frame = 1

Query: 1   MVESRS--NPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAI 60
           MVESRS  N ++SL  RLKL GE  +CW +L +LQAC+GE++TFF+ GETYLG  CCQAI
Sbjct: 23  MVESRSLPNASSSLTVRLKLEGEPSNCWDSLWQLQACSGEIVTFFVNGETYLGHGCCQAI 82

Query: 61  KIIQHECWPTLLGSLGYTTEEGDILEAYCDTTID 93
           ++I H+CWP ++ SLG+T EE D+LE YCD  +D
Sbjct: 83  RVIGHDCWPNIVASLGFTNEETDVLEGYCDQAVD 116

BLAST of Cla003430 vs. NCBI nr
Match: gi|700209741|gb|KGN64837.1| (hypothetical protein Csa_1G124010 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 3.5e-47
Identity = 91/116 (78.45%), Postives = 100/116 (86.21%), Query Frame = 1

Query: 1   MVESRSNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKI 60
           MVESR +P TSL  RLKL+ ET DCWGTLH+LQACTGEV+TFFLTGETYLGSNCCQAIK+
Sbjct: 1   MVESRPDPKTSLATRLKLDSETSDCWGTLHELQACTGEVVTFFLTGETYLGSNCCQAIKV 60

Query: 61  IQHECWPTLLGSLGYTTEEGDILEAYCDTTIDGLTTLSSPLSFFIEQNAVTKIVTP 117
           IQHECWPTLL SLGYTTEEGD+LEAYCDTTID + T SSPLS  IEQN + K + P
Sbjct: 61  IQHECWPTLLASLGYTTEEGDVLEAYCDTTIDTIKTSSSPLSLSIEQNNMPKSIAP 116

BLAST of Cla003430 vs. NCBI nr
Match: gi|659072260|ref|XP_008464551.1| (PREDICTED: egg cell-secreted protein 1.1-like [Cucumis melo])

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-42
Identity = 87/113 (76.99%), Postives = 95/113 (84.07%), Query Frame = 1

Query: 5   RSNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKIIQHE 64
           RS   TSL  RLKL+ ET DCWGTL++LQACTGEV+TFFLTGETYLGSNCCQAIK+IQHE
Sbjct: 93  RSGSKTSLATRLKLDSETSDCWGTLYQLQACTGEVVTFFLTGETYLGSNCCQAIKVIQHE 152

Query: 65  CWPTLLGSLGYTTEEGDILEAYCDTTIDGL-TTLSSPLSFFIEQNAVTKIVTP 117
           CWPTLL SLGYTTEEGDILEAYC+TTID L T+ SS LS  IEQN   KI+ P
Sbjct: 153 CWPTLLESLGYTTEEGDILEAYCNTTIDTLKTSSSSDLSLSIEQNTAAKIIAP 205

BLAST of Cla003430 vs. NCBI nr
Match: gi|700209742|gb|KGN64838.1| (hypothetical protein Csa_1G124020 [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-37
Identity = 77/101 (76.24%), Postives = 86/101 (85.15%), Query Frame = 1

Query: 2   VESRSNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKII 61
           VES  NP +SL  R+KL GET DCWG+L++LQACTGEVITFFL+GE YLG  CCQAI+ I
Sbjct: 22  VESSPNPKSSLATRIKLEGETSDCWGSLYELQACTGEVITFFLSGEAYLGVKCCQAIRTI 81

Query: 62  QHECWPTLLGSLGYTTEEGDILEAYCDTT--IDGLTTLSSP 101
           QHECWPTLLGSLGYTTEEGDILEAYCDTT  +D L T+SSP
Sbjct: 82  QHECWPTLLGSLGYTTEEGDILEAYCDTTVDVDRLFTISSP 122

BLAST of Cla003430 vs. NCBI nr
Match: gi|659072258|ref|XP_008464543.1| (PREDICTED: egg cell-secreted protein 1.2-like [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 7.3e-37
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 1

Query: 1   MVESRSNPTTSLEERLKLNGETL-DCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIK 60
           MVES  NP +SL  R+KL GET  DCWG+L++LQACTGEVITFFL+GE YLG  CCQAIK
Sbjct: 21  MVESSPNPKSSLTTRIKLEGETTSDCWGSLYELQACTGEVITFFLSGEAYLGVKCCQAIK 80

Query: 61  IIQHECWPTLLGSLGYTTEEGDILEAYCDTTIDG--LTTLSSP 101
            IQHECWPTLLGSLGYTTEEGDILEAYCDTT D   L T+SSP
Sbjct: 81  TIQHECWPTLLGSLGYTTEEGDILEAYCDTTADDDRLFTMSSP 123

BLAST of Cla003430 vs. NCBI nr
Match: gi|356574547|ref|XP_003555407.1| (PREDICTED: egg cell-secreted protein 1.1-like [Glycine max])

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-29
Identity = 64/117 (54.70%), Postives = 85/117 (72.65%), Query Frame = 1

Query: 4   SRSNPTTSLEERLKLNGETLDCWGTLHKLQACTGEVITFFLTGETYLGSNCCQAIKIIQH 63
           S S+  TSL  RLKL+GE+ +CW +L +LQACTGEVITFFL GETYLG +CCQAI+I+ H
Sbjct: 25  SSSSSNTSLVARLKLDGESSNCWDSLFELQACTGEVITFFLNGETYLGPSCCQAIRIVGH 84

Query: 64  ECWPTLLGSLGYTTEEGDILEAYCDTTIDGLTTLSSPLS----FFIEQNAVTKIVTP 117
           +CWP ++ SLG+TTEEGD+L+ YCD+  + L +  SP S         +A TK++ P
Sbjct: 85  DCWPDMIASLGFTTEEGDVLQGYCDSEKEQLHSPPSPTSPTTVVHDFDDATTKVLLP 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
EC11_ARATH3.2e-2457.83Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1[more]
EC12_ARATH5.8e-1842.35Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1[more]
EC14_ARATH2.2e-1742.35Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1[more]
EC13_ARATH4.9e-1741.67Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1[more]
EC15_ARATH4.9e-0937.66Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LVH9_CUCSA2.4e-4778.45Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124010 PE=4 SV=1[more]
A0A0A0LSR4_CUCSA1.0e-3776.24Uncharacterized protein OS=Cucumis sativus GN=Csa_1G124020 PE=4 SV=1[more]
K7N3Y2_SOYBN3.0e-2954.70Uncharacterized protein OS=Glycine max GN=GLYMA_20G168300 PE=4 SV=1[more]
A0A0B2SQ80_GLYSO3.0e-2954.70Uncharacterized protein OS=Glycine soja GN=glysoja_031725 PE=4 SV=1[more]
A0A0B2S0S1_GLYSO4.8e-2759.57Uncharacterized protein OS=Glycine soja GN=glysoja_014832 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700209741|gb|KGN64837.1|3.5e-4778.45hypothetical protein Csa_1G124010 [Cucumis sativus][more]
gi|659072260|ref|XP_008464551.1|2.6e-4276.99PREDICTED: egg cell-secreted protein 1.1-like [Cucumis melo][more]
gi|700209742|gb|KGN64838.1|1.5e-3776.24hypothetical protein Csa_1G124020 [Cucumis sativus][more]
gi|659072258|ref|XP_008464543.1|7.3e-3776.70PREDICTED: egg cell-secreted protein 1.2-like [Cucumis melo][more]
gi|356574547|ref|XP_003555407.1|4.3e-2954.70PREDICTED: egg cell-secreted protein 1.1-like [Glycine max][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008502Prolamin-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009567 double fertilization forming a zygote and endosperm
biological_process GO:0080155 regulation of double fertilization forming a zygote and endosperm
biological_process GO:2000008 regulation of protein localization to cell surface
biological_process GO:0007338 single fertilization
biological_process GO:0048240 sperm capacitation
cellular_component GO:0005575 cellular_component
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0005576 extracellular region
cellular_component GO:0005622 intracellular
cellular_component GO:0031982 vesicle
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla003430Cla003430.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008502Prolamin-like domainPFAMPF05617Prolamin_likecoord: 24..88
score: 2.5
NoneNo IPR availablePANTHERPTHR31181UNCHARACTERIZEDcoord: 6..113
score: 2.2
NoneNo IPR availablePANTHERPTHR31181:SF49EGG CELL-SECRETED PROTEIN 1.1coord: 6..113
score: 2.2