Cla002926 (gene) Watermelon (97103) v1

Overview
NameCla002926
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr10 : 21730250 .. 21731828 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCTACGGTTTGGGAAAGCTCTTCAGGAGGAGCTAGTGGTGATGACGACAATTACGCGCAAGACATAAAAGATGAAGAAGAATGTCTCTGCGCATCTGGGTACTTGCGCAAGTTGCAATTCAGGTTGAGAACTCAAAGAATTTACACTGCTCCGAATCCTTCAATGGTATTACCCGACTGCTTATTTTTAAGTGTTTGTTTCAATATTTTATCTGTCTCTCTAGGAAGCATGCTTCAACTGCTCGATGGAATGATCAAATGGGAATGGCAGAAGTTTTAGAGAACAAGGGCAGCCTTTGGACGACAATTGGCATTGTACGTTGTGGCAAGATTTATTGTTCCATTGAGGAAACTTTGTAGGTTAAATTATGATTTTATTATGGTTTTTTTATCCCTATTGTTTTTCATATTGGCCACTTCTCTTTCACATTGTCTTAACTTAATTTGATCACTTTAAAGTAGTAGGGTAATCTCATGAAAAAGAAAAGAAGTTGGAAGTGTTTCCAAGCCAAGGCCAGGAAATGGCCTATGAGAGCCGCATTAGGTGCTTCTTGGCAATTACCTTGGTCGCCTCTTGGTCAGTTTTTTATTGCTTTTTGGTTGTCTTTGGGGCTGTATTTTGAACGTTACATTTTGAATAAAGGGAAGGAATTCAAACTTAAAATATATAAGAAGAAATACTAGTAGCCTTTTGTGTCTTAGTAAAAGTAGGAAGTCATCATTTTTTAAATTCATTTTTAACTGTAGTTTTCTTCCTATCATTATCTTTTGGAAATAAGTAAGCTTGCTTGTGTCCAACTGTATAATTCATTTTATGTATCACTTATTCTTCTTTACTATTTCCAATATATTCTAGTCTATTTACAATAAATATGCACATCTATTGTTTTGCATTCTCTTGGGCAATGTTTTTTTTAAATATTTTTTTTGTGTCTCTTTTCTTAGGAAAGTTAGAGGCGTGTTGCCTTAAAGTGTGTCTTGTACTTTGTAAATGTTGATTGTAATATGAACTTTGGCTCTAAAGTAGAGTTGTACTAATTAAAGCAGAAAAATATTCTCTTTTTAATTTTTTAATTTTATAAATAGAGATATTAAGGTTCATAATCTCTTTTGAGACATTCGGATGATAATATTTATGTACACTATCAAATTTTCTTTTCTATATTTTCAGATTTCTTATTGAAGTCGGGGCCTTACATCTTTTGGATCATGATAATTCAAGTCTTTCCTTGAAAGATGTATATAAGAAGGTAGCCGAAGGAAAAAATGGGTATCTTTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAGTCTCTTGGTTTTACTGTTGGAAAGCATAAAGTTCCCTGGTCTCTGAAGAGTGTTAGGAATGGCAGTGACATTTCATCTCCAAGTTCTATTGAAAACAAAGGAGCATCAGATGACAAATCAGAAGATGAGAGGTCGATCTTTGAACTATTAGATGCCATTCAGCTCAATGAAGTGACACCCATTTTTTATGTTTTTCTTCCACATAACAAGTTTAGAAAGTCTTCTCTTGGTGACCCAAATTTTATGGTCTGCTTGACTAGGTAA

mRNA sequence

ATGGAGGCTACGGTTTGGGAAAGCTCTTCAGGAGGAGCTAGTGGTGATGACGACAATTACGCGCAAGACATAAAAGATGAAGAAGAATGTCTCTGCGCATCTGGGTACTTGCGCAAGTTGCAATTCAGATTTCTTATTGAAGTCGGGGCCTTACATCTTTTGGATCATGATAATTCAAGTCTTTCCTTGAAAGATGTATATAAGAAGGTAGCCGAAGGAAAAAATGGGTATCTTTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAGTCTCTTGGTTTTACTGTTGGAAAGCATAAAGTTCCCTGGTCTCTGAAGAGTGTTAGGAATGGCAGTGACATTTCATCTCCAAGTTCTATTGAAAACAAAGGAGCATCAGATGACAAATCAGAAGATGAGAGGTCGATCTTTGAACTATTAGATGCCATTCAGCTCAATGAAGTGACACCCATTTTTTATGTTTTTCTTCCACATAACAAGTTTAGAAAGTCTTCTCTTGGTGACCCAAATTTTATGGTCTGCTTGACTAGGTAA

Coding sequence (CDS)

ATGGAGGCTACGGTTTGGGAAAGCTCTTCAGGAGGAGCTAGTGGTGATGACGACAATTACGCGCAAGACATAAAAGATGAAGAAGAATGTCTCTGCGCATCTGGGTACTTGCGCAAGTTGCAATTCAGATTTCTTATTGAAGTCGGGGCCTTACATCTTTTGGATCATGATAATTCAAGTCTTTCCTTGAAAGATGTATATAAGAAGGTAGCCGAAGGAAAAAATGGGTATCTTTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAGTCTCTTGGTTTTACTGTTGGAAAGCATAAAGTTCCCTGGTCTCTGAAGAGTGTTAGGAATGGCAGTGACATTTCATCTCCAAGTTCTATTGAAAACAAAGGAGCATCAGATGACAAATCAGAAGATGAGAGGTCGATCTTTGAACTATTAGATGCCATTCAGCTCAATGAAGTGACACCCATTTTTTATGTTTTTCTTCCACATAACAAGTTTAGAAAGTCTTCTCTTGGTGACCCAAATTTTATGGTCTGCTTGACTAGGTAA

Protein sequence

MEATVWESSSGGASGDDDNYAQDIKDEEECLCASGYLRKLQFRFLIEVGALHLLDHDNSSLSLKDVYKKVAEGKNGYLWEQFEVYRHLKSLGFTVGKHKVPWSLKSVRNGSDISSPSSIENKGASDDKSEDERSIFELLDAIQLNEVTPIFYVFLPHNKFRKSSLGDPNFMVCLTR
Homology
[Close]
BLAST of Cla002926 vs. TrEMBL
Match: A0A0A0KXV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G334710 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.5e-67
Identity = 143/222 (64.41%), Postives = 154/222 (69.37%), Query Frame = 1 

Query: 1   MEATVWESSSGGAS--GDDDNYAQDIKDEEECL--------------------------- 60
           MEAT WESSSGGAS  GD+DNY QDI DEEECL                           
Sbjct: 1   MEATNWESSSGGASDTGDEDNYEQDINDEEECLSASGCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  -----------------CASGYLRKLQFRFLIEVGALHLLDHDNSSLSLKDVYKKVAEGK 120
                            C   Y    +  FLIEVGALHLLDHDNSSLSLKDVYKKVAEG+
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGR 120

Query: 121 NGYLWEQFEVYRHLKSLGFTVGKHKVPWSLKSVRNGSDISSPSSIENKGASDDKSEDERS 177
           +G LWEQFEVYRHLKSLG+ VGKH+VPWSLK+VRN  DISSPSS ENKGASD KS+DE+S
Sbjct: 121 SGRLWEQFEVYRHLKSLGYIVGKHRVPWSLKNVRNDCDISSPSSTENKGASDVKSDDEQS 180

[Close]
BLAST of Cla002926 vs. TrEMBL
Match: M1AV98_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400011936 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.7e-31
Identity = 74/175 (42.29%), Postives = 115/175 (65.71%), Query Frame = 1 

Query: 1   MEATVWESSSGGASGDDDNYAQDIKDEEECLC-ASGYLRKLQFRFLIEVGALHLLDHDNS 60
           MEA  W S S G S D ++Y +D  D+  C   AS  + KLQFR+L+E+GALHLL  D++
Sbjct: 1   MEADKWASFSNGTS-DSESYREDPDDDNHCCAYASTDIPKLQFRYLVEIGALHLLSKDDT 60

Query: 61  SLSLKDVYKKVAEGKNGYLWEQFEVYRHLKSLGFTVGKHKVPWSLKSVRNGSDISSPSSI 120
            LSL+ VY KVAEGK+G   E +E Y+HLKSLG+ VG+H +PWS++  +  + + +    
Sbjct: 61  PLSLEHVYNKVAEGKSGCSLEYYEAYKHLKSLGYIVGRHGIPWSVRRSK-ANCVVNQDMP 120

Query: 121 ENKGASDDKSEDERSIFELLDAIQLNEVTPIFYVFLPHNKFRKSSLGDPNFMVCL 175
           E   + D++S +   I E+++ +Q+  +   F ++ P+++FRKS+ GDP F++CL
Sbjct: 121 EPAQSGDEESRNSILISEMINNMQIGGLRLAFDIYPPNSRFRKSAPGDPCFVLCL 173

[Close]
BLAST of Cla002926 vs. TrEMBL
Match: D7THT2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08930 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 4.1e-30
Identity = 67/133 (50.38%), Postives = 94/133 (70.68%), Query Frame = 1 

Query: 44  FLIEVGALHLLDHDNSSLSLKDVYKKVAEGKNGYLWEQFEVYRHLKSLGFTVGKHKVPWS 103
           FL E+GALHLLD ++  +SLK +Y KV++GK G  WE FE YRHLKSLG+ VG+H +PW+
Sbjct: 105 FLAELGALHLLDDNDVPISLKGIYDKVSQGKCGCCWESFEAYRHLKSLGYIVGRHGIPWT 164

Query: 104 LKSVRNGSDISSPSSIENKGASDDKSEDERSIFELLDAIQLNEVTPIFYVFLPHNKFRKS 163
            K  +   D S   + E    +D+ SE+E S  EL++ + + EV  +F V+LP++KFRKS
Sbjct: 165 SKGAKTCLD-SHQGTPEGNSRTDEGSEEENSTIELVNNMHITEVKLLFDVYLPNSKFRKS 224

Query: 164 SLGDPNFMVCLTR 177
           S GDP+F++CLTR
Sbjct: 225 SPGDPSFVLCLTR 236

[Close]
BLAST of Cla002926 vs. TrEMBL
Match: D7THT2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08930 PE=4 SV=1)

HSP 1 Score: 30.0 bits (66), Expect = 3.5e+03
Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 1 

Query: 12 GASGDDDNYAQDIKDEEECLCASGYLRKLQFR 44
          GAS D + Y QD  DEEE    S  + KLQFR
Sbjct: 30 GAS-DSEIYLQDANDEEEHYYTSSSISKLQFR 60


HSP 2 Score: 138.7 bits (348), Expect = 7.0e-30
Identity = 68/134 (50.75%), Postives = 98/134 (73.13%), Query Frame = 1 

Query: 44  FLIEVGALHLLDHDNSSLSLKDVYKKVAEGKNGYLWEQFEVYRHLKSLGFTVGKHKVPWS 103
           FL+E+G L LLD D+ +LSL+D+Y K+++ KNG  WE+F+ YR LKSLG+ VG+H +PWS
Sbjct: 42  FLVEIGDLLLLD-DSGTLSLEDIYMKISDRKNGCCWEEFQAYRQLKSLGYIVGRHGIPWS 101

Query: 104 LKSVR-NGSDISSPSSIENKGASDDKSEDERSIFELLDAIQLNEVTPIFYVFLPHNKFRK 163
           +KS++ N   +SS    E+    D  SE+ RS+  LL+ +Q+NE   IF V+LP++KFRK
Sbjct: 102 IKSLKSNYETVSSQGCPESDEVVDLGSEETRSVIGLLNGMQINEARLIFDVYLPNSKFRK 161

Query: 164 SSLGDPNFMVCLTR 177
           SS GDP+F++C TR
Sbjct: 162 SSPGDPSFVLCFTR 174

[Close]
BLAST of Cla002926 vs. TrEMBL
Match: A5BBM2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010199 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-29
Identity = 67/133 (50.38%), Postives = 92/133 (69.17%), Query Frame = 1 

Query: 44   FLIEVGALHLLDHDNSSLSLKDVYKKVAEGKNGYLWEQFEVYRHLKSLGFTVGKHKVPWS 103
            FL E+GALHLLD  +  +SLK +Y KV++GK G  WE FE YRHLKSLG+ VG+H +PW+
Sbjct: 1108 FLAELGALHLLDDXDVPISLKGIYDKVSQGKCGCCWESFEAYRHLKSLGYIVGRHGIPWT 1167

Query: 104  LKSVRNGSDISSPSSIENKGASDDKSEDERSIFELLDAIQLNEVTPIFYVFLPHNKFRKS 163
             K  +   D S   + E    +D  SE+E S  EL++ + + EV  +F V+LP++KFRKS
Sbjct: 1168 SKGXKTCLD-SHQGTPEGNSRTDXGSEEENSTIELVNNMHITEVKLLFDVYLPNSKFRKS 1227

Query: 164  SLGDPNFMVCLTR 177
            S GDP+F++CLTR
Sbjct: 1228 SPGDPSFVLCLTR 1239

[Close]
BLAST of Cla002926 vs. NCBI nr
Match: gi|778694019|ref|XP_011653726.1| (PREDICTED: uncharacterized protein LOC101210680 isoform X1 [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 7.9e-67
Identity = 143/222 (64.41%), Postives = 154/222 (69.37%), Query Frame = 1 

Query: 1   MEATVWESSSGGAS--GDDDNYAQDIKDEEECL--------------------------- 60
           MEAT WESSSGGAS  GD+DNY QDI DEEECL                           
Sbjct: 1   MEATNWESSSGGASDTGDEDNYEQDINDEEECLSASGCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  -----------------CASGYLRKLQFRFLIEVGALHLLDHDNSSLSLKDVYKKVAEGK 120
                            C   Y    +  FLIEVGALHLLDHDNSSLSLKDVYKKVAEG+
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALHLLDHDNSSLSLKDVYKKVAEGR 120

Query: 121 NGYLWEQFEVYRHLKSLGFTVGKHKVPWSLKSVRNGSDISSPSSIENKGASDDKSEDERS 177
           +G LWEQFEVYRHLKSLG+ VGKH+VPWSLK+VRN  DISSPSS ENKGASD KS+DE+S
Sbjct: 121 SGRLWEQFEVYRHLKSLGYIVGKHRVPWSLKNVRNDCDISSPSSTENKGASDVKSDDEQS 180

[Close]
BLAST of Cla002926 vs. NCBI nr
Match: gi|659126611|ref|XP_008463274.1| (PREDICTED: uncharacterized protein LOC103501474 [Cucumis melo])

HSP 1 Score: 251.1 bits (640), Expect = 1.4e-63
Identity = 137/222 (61.71%), Postives = 150/222 (67.57%), Query Frame = 1 

Query: 1   MEATVWESSSGGAS--GDDDNYAQDIKDEEECL--------------------------- 60
           MEAT W+SSSGGAS  GD+DNY QDI DEEECL                           
Sbjct: 1   MEATNWKSSSGGASDTGDEDNYEQDINDEEECLSASRCLRKLQFRKHASTARWNDQMGMA 60

Query: 61  -----------------CASGYLRKLQFRFLIEVGALHLLDHDNSSLSLKDVYKKVAEGK 120
                            C   Y    +  FLIEVGALHLLDHDNS+LSLKDVYKKVAEG+
Sbjct: 61  EVLENKGSLWTTTGIVRCGKIYCTIEETLFLIEVGALHLLDHDNSTLSLKDVYKKVAEGR 120

Query: 121 NGYLWEQFEVYRHLKSLGFTVGKHKVPWSLKSVRNGSDISSPSSIENKGASDDKSEDERS 177
           +G +WEQFEVYRHLKSLG+ VGKHKVPWSLK+VRN  D+SSPSS E KG SD KSEDE+ 
Sbjct: 121 SGCIWEQFEVYRHLKSLGYIVGKHKVPWSLKNVRNDCDLSSPSSTEKKGVSDVKSEDEQL 180

[Close]
BLAST of Cla002926 vs. NCBI nr
Match: gi|743941698|ref|XP_011015344.1| (PREDICTED: uncharacterized protein LOC105118975 isoform X3 [Populus euphratica])

HSP 1 Score: 150.6 bits (379), Expect = 2.6e-33
Identity = 78/172 (45.35%), Postives = 108/172 (62.79%), Query Frame = 1 

Query: 6   WESSSGGASGDDDNYAQDIKDEEECLCASGYLRKLQFRFLIEVGALHLLDHDNSSLSLKD 65
           W+SSSG  +  D    +D      CL       KLQFRFL E+GAL ++D ++  L+LKD
Sbjct: 7   WKSSSGEVTDTDQINDEDFYSTSACLS------KLQFRFLAEIGALLVMDDNDECLALKD 66

Query: 66  VYKKVAEGKNGYLWEQFEVYRHLKSLGFTVGKHKVPWSLKSVRNGS-DISSPSSIENKGA 125
           +YKK++E  NG  WE FEVY+HLKSLG+ VG+H VPWS+K V N S   SS  +I+N   
Sbjct: 67  IYKKISEETNGCSWELFEVYKHLKSLGYVVGRHGVPWSMKGVENNSKPCSSQGTIQNNRV 126

Query: 126 SDDKSEDERSIFELLDAIQLNEVTPIFYVFLPHNKFRKSSLGDPNFMVCLTR 177
              +        ++L  +Q++E+   F V+LP++KFRKSS GDP F++CL R
Sbjct: 127 EGVEENSITCAVQMLSNLQVDELRLNFDVYLPNSKFRKSSPGDPAFLLCLVR 172

[Close]
BLAST of Cla002926 vs. NCBI nr
Match: gi|1009154062|ref|XP_015894967.1| (PREDICTED: uncharacterized protein LOC107428885 [Ziziphus jujuba])

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32
Identity = 72/133 (54.14%), Postives = 100/133 (75.19%), Query Frame = 1 

Query: 44  FLIEVGALHLLDHDNSSLSLKDVYKKVAEGKNGYLWEQFEVYRHLKSLGFTVGKHKVPWS 103
           FL E+GAL LLDH +++L L+D+Y KVA GKNG  WEQF+ Y+ LKSLG+ VG+H VPWS
Sbjct: 88  FLAELGALILLDHCDATLPLEDIYVKVANGKNGCSWEQFQAYKQLKSLGYIVGRHGVPWS 147

Query: 104 LKSV-RNGSDISSPSSIENKGASDDKSEDERSIFELLDAIQLNEVTPIFYVFLPHNKFRK 163
           LK V R+   +SS  S+E+   +D +SED+ SI  + + +Q+NE  P+F V+LP++KFRK
Sbjct: 148 LKGVNRSNECVSSKCSVES-ALADSESEDKSSIIGMFNGMQINEARPVFDVYLPNSKFRK 207

Query: 164 SSLGDPNFMVCLT 176
           SS GDP+F++C T
Sbjct: 208 SSPGDPSFVLCFT 219

[Close]
BLAST of Cla002926 vs. NCBI nr
Match: gi|828300360|ref|XP_012569337.1| (PREDICTED: uncharacterized protein LOC101497379 isoform X2 [Cicer arietinum])

HSP 1 Score: 142.1 bits (357), Expect = 9.1e-31
Identity = 83/203 (40.89%), Postives = 122/203 (60.10%), Query Frame = 1 

Query: 1   MEATVWESSSGGASGDDDN--YAQDIKDEEECLCASGYLRKLQFR--------------- 60
           ME  VW  SS   SG+DD+  + Q+  D+E+   +   L KLQFR               
Sbjct: 1   MEQKVWGCSSNEDSGEDDDDVFLQNESDDEQFHFSPASLPKLQFRNTKSKGRWNEEMGMA 60

Query: 61  ---------FLIEVGALHLLDHDNSSLSLKDVYKKVAEGKNGYLWEQFEVYRHLKSLGFT 120
                    +L+E+GAL LLD+ + S+SL ++Y+KVA  K+G  WE FE YRHLKSLG+ 
Sbjct: 61  EVFEKNGKMYLMELGALDLLDNGDRSISLIEMYEKVAGEKSGCCWELFEAYRHLKSLGYI 120

Query: 121 VGKHKVPWSLKSVRNG-SDISSPSSIENKGASDDKSEDERSIFELLDAIQLNEVTPIFYV 177
           +G+H V WSLKS+R+     +S  + ++K   D  S  E SI +L   +++N++ P F V
Sbjct: 121 IGRHGVAWSLKSIRSSLKSTASEGTEDSKQFVDMVSNVELSINKLFSDLKINDLNPDFDV 180

The following BLAST results are available for this feature:
BLAST of Cla002926 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXV5_CUCSA5.5e-6764.41Uncharacterized protein OS=Cucumis sativus GN=Csa_4G334710 PE=4 SV=1[more]
M1AV98_SOLTU3.7e-3142.29Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400011936 PE=4 SV=1[more]
D7THT2_VITVI4.1e-3050.38Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08930 PE=4 SV=... [more]
D7THT2_VITVI3.5e+0353.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08930 PE=4 SV=... [more]
A5BBM2_VITVI2.0e-2950.38Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010199 PE=4 SV=1[more]
BLAST of Cla002926 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778694019|ref|XP_011653726.1|7.9e-6764.41PREDICTED: uncharacterized protein LOC101210680 isoform X1 [Cucumis sativus][more]
gi|659126611|ref|XP_008463274.1|1.4e-6361.71PREDICTED: uncharacterized protein LOC103501474 [Cucumis melo][more]
gi|743941698|ref|XP_011015344.1|2.6e-3345.35PREDICTED: uncharacterized protein LOC105118975 isoform X3 [Populus euphratica][more]
gi|1009154062|ref|XP_015894967.1|1.3e-3254.14PREDICTED: uncharacterized protein LOC107428885 [Ziziphus jujuba][more]
gi|828300360|ref|XP_012569337.1|9.1e-3140.89PREDICTED: uncharacterized protein LOC101497379 isoform X2 [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024337tRNA_splic_suSen54
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process GO:0000379 tRNA-type intron splice site recognition and cleavage
cellular_component GO:0005575 cellular_component
cellular_component GO:0000214 tRNA-intron endonuclease complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0000213 tRNA-intron endonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla002926Cla002926.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024337tRNA-splicing endonuclease, subunit Sen54PANTHERPTHR21027TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54coord: 44..176
score: 1.3