Cla001629 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATTTGCCAACATTCTCTCTGCCCATTGCTTGATGGGGCTAGCCCTAACCCTGGCTTCCATTGCCACCATCTTGGCCGAAAGCTACCCTAAAAACTACATTGCTGCCCACAACGTCATTCGTGCAGAGGTTGGCGTCGAGCCCCTCCATTGGAATACCACTTTGGCTTCCTATGCTCAGAATTATGCTAACACGAAGATCGCTACTTGTCAAATGGAGCACTCTAGAGGACCCTATGGTGAAAACCTAGCAGAGGGATATGAAGTGATGACAGCAGAGATGGCAGTGAGTCTTTGGGCCGACGAGAAGAAACATTACGACTACAATTCTAATACGTGTGTCAATGACTCTAGCCATTGTCTCCATTATACACAGTTGGTATGGAGGAACACCAAATCTGTTGGTTGTGCCCAAGTGAAGTGCCAAACAATTGGGTTTTTCTAA ATGGCATTTGCCAACATTCTCTCTGCCCATTGCTTGATGGGGCTAGCCCTAACCCTGGCTTCCATTGCCACCATCTTGGCCGAAAGCTACCCTAAAAACTACATTGCTGCCCACAACGTCATTCGTGCAGAGGTTGGCGTCGAGCCCCTCCATTGGAATACCACTTTGGCTTCCTATGCTCAGAATTATGCTAACACGAAGATCGCTACTTGTCAAATGGAGCACTCTAGAGGACCCTATGGTGAAAACCTAGCAGAGGGATATGAAGTGATGACAGCAGAGATGGCAGTGAGTCTTTGGGCCGACGAGAAGAAACATTACGACTACAATTCTAATACGTGTGTCAATGACTCTAGCCATTGTCTCCATTATACACAGTTGGTATGGAGGAACACCAAATCTGTTGGTTGTGCCCAAGTGAAGTGCCAAACAATTGGGTTTTTCTAA ATGGCATTTGCCAACATTCTCTCTGCCCATTGCTTGATGGGGCTAGCCCTAACCCTGGCTTCCATTGCCACCATCTTGGCCGAAAGCTACCCTAAAAACTACATTGCTGCCCACAACGTCATTCGTGCAGAGGTTGGCGTCGAGCCCCTCCATTGGAATACCACTTTGGCTTCCTATGCTCAGAATTATGCTAACACGAAGATCGCTACTTGTCAAATGGAGCACTCTAGAGGACCCTATGGTGAAAACCTAGCAGAGGGATATGAAGTGATGACAGCAGAGATGGCAGTGAGTCTTTGGGCCGACGAGAAGAAACATTACGACTACAATTCTAATACGTGTGTCAATGACTCTAGCCATTGTCTCCATTATACACAGTTGGTATGGAGGAACACCAAATCTGTTGGTTGTGCCCAAGTGAAGTGCCAAACAATTGGGTTTTTCTAA MAFANILSAHCLMGLALTLASIATILAESYPKNYIAAHNVIRAEVGVEPLHWNTTLASYAQNYANTKIATCQMEHSRGPYGENLAEGYEVMTAEMAVSLWADEKKHYDYNSNTCVNDSSHCLHYTQLVWRNTKSVGCAQVKCQTIGFF
BLAST of Cla001629 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-32 Identity = 70/146 (47.95%), Postives = 94/146 (64.38%), Query Frame = 1
BLAST of Cla001629 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.3e-32 Identity = 69/148 (46.62%), Postives = 91/148 (61.49%), Query Frame = 1
BLAST of Cla001629 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 6.9e-32 Identity = 69/146 (47.26%), Postives = 93/146 (63.70%), Query Frame = 1
BLAST of Cla001629 vs. Swiss-Prot
Match: PR1C_TOBAC (Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-29 Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = 1
BLAST of Cla001629 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.5e-29 Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = 1
BLAST of Cla001629 vs. TrEMBL
Match: A0A0A0K7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 7.6e-62 Identity = 120/149 (80.54%), Postives = 125/149 (83.89%), Query Frame = 1
BLAST of Cla001629 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.2e-38 Identity = 81/143 (56.64%), Postives = 102/143 (71.33%), Query Frame = 1
BLAST of Cla001629 vs. TrEMBL
Match: A0A0A0K2C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070230 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.6e-38 Identity = 76/134 (56.72%), Postives = 99/134 (73.88%), Query Frame = 1
BLAST of Cla001629 vs. TrEMBL
Match: A0A0A0K4C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070250 PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 8.5e-37 Identity = 77/143 (53.85%), Postives = 101/143 (70.63%), Query Frame = 1
BLAST of Cla001629 vs. TrEMBL
Match: B9S7U6_RICCO (Protein PRY2, putative OS=Ricinus communis GN=RCOM_1381800 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.6e-35 Identity = 70/148 (47.30%), Postives = 100/148 (67.57%), Query Frame = 1
BLAST of Cla001629 vs. NCBI nr
Match: gi|659110139|ref|XP_008455069.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]) HSP 1 Score: 265.4 bits (677), Expect = 6.0e-68 Identity = 123/143 (86.01%), Postives = 132/143 (92.31%), Query Frame = 1
BLAST of Cla001629 vs. NCBI nr
Match: gi|778724756|ref|XP_004137080.2| (PREDICTED: pathogenesis-related protein 1A-like [Cucumis sativus]) HSP 1 Score: 244.6 bits (623), Expect = 1.1e-61 Identity = 120/149 (80.54%), Postives = 125/149 (83.89%), Query Frame = 1
BLAST of Cla001629 vs. NCBI nr
Match: gi|659110141|ref|XP_008455070.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]) HSP 1 Score: 172.2 bits (435), Expect = 6.9e-40 Identity = 77/136 (56.62%), Postives = 104/136 (76.47%), Query Frame = 1
BLAST of Cla001629 vs. NCBI nr
Match: gi|449438289|ref|XP_004136921.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]) HSP 1 Score: 167.5 bits (423), Expect = 1.7e-38 Identity = 81/143 (56.64%), Postives = 102/143 (71.33%), Query Frame = 1
BLAST of Cla001629 vs. NCBI nr
Match: gi|449438606|ref|XP_004137079.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 2.2e-38 Identity = 76/134 (56.72%), Postives = 99/134 (73.88%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |