CmoCh19G005350 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G005350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Location	Cmo_Chr19 : 6242865 .. 6243323 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATATTCCGACTTTCTCCCCGCACTTTGGATCGTCGGAATTGCCTTAATCCTAGCTCAAATCTCTCTAACGATCGCCGAAAGCAGCCCCAAGGACTGGGTCGATGCTACAAATGCCATTCGAGCTGAGAATGGCGTCGGCCCAGTGTCTTGGAACACCACTTTGGCGACCTATGCTCTAGATTATGCCAAAACAAGGATCGCTACGTGCGAGATGGAGCACTCCGATGGACCTTATGCCGAGAACTTAGCAGAAGCATATGAGAAGACAACAGCAGAATTGACAGTGAAGTTTTGGGCTAGCGAGAAGGAGTTTTATGACCCTAAAACAAAGAAGTGCGTGAAGGAAGAGTGCGGACATTTCCTGAATTTGGTGGCGAAGGACACAACATCCATTGGCTGTGCTGAAGTTAAGTGCCACAACAACTTTATTTTCTCCATCTGCGACTATTCTTAA

mRNA sequence

ATGGTATATTCCGACTTTCTCCCCGCACTTTGGATCGTCGGAATTGCCTTAATCCTAGCTCAAATCTCTCTAACGATCGCCGAAAGCAGCCCCAAGGACTGGGTCGATGCTACAAATGCCATTCGAGCTGAGAATGGCGTCGGCCCAGTGTCTTGGAACACCACTTTGGCGACCTATGCTCTAGATTATGCCAAAACAAGGATCGCTACGTGCGAGATGGAGCACTCCGATGGACCTTATGCCGAGAACTTAGCAGAAGCATATGAGAAGACAACAGCAGAATTGACAGTGAAGTTTTGGGCTAGCGAGAAGGAGTTTTATGACCCTAAAACAAAGAAGTGCGTGAAGGAAGAGTGCGGACATTTCCTGAATTTGGTGGCGAAGGACACAACATCCATTGGCTGTGCTGAAGTTAAGTGCCACAACAACTTTATTTTCTCCATCTGCGACTATTCTTAA

Coding sequence (CDS)

ATGGTATATTCCGACTTTCTCCCCGCACTTTGGATCGTCGGAATTGCCTTAATCCTAGCTCAAATCTCTCTAACGATCGCCGAAAGCAGCCCCAAGGACTGGGTCGATGCTACAAATGCCATTCGAGCTGAGAATGGCGTCGGCCCAGTGTCTTGGAACACCACTTTGGCGACCTATGCTCTAGATTATGCCAAAACAAGGATCGCTACGTGCGAGATGGAGCACTCCGATGGACCTTATGCCGAGAACTTAGCAGAAGCATATGAGAAGACAACAGCAGAATTGACAGTGAAGTTTTGGGCTAGCGAGAAGGAGTTTTATGACCCTAAAACAAAGAAGTGCGTGAAGGAAGAGTGCGGACATTTCCTGAATTTGGTGGCGAAGGACACAACATCCATTGGCTGTGCTGAAGTTAAGTGCCACAACAACTTTATTTTCTCCATCTGCGACTATTCTTAA

Homology

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BLAST of CmoCh19G005350 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 55/125 (44.00%), Postives = 79/125 (63.20%), Query Frame = 1


Query: 27  AESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATCEMEHSDGPYAENLAE 86
           A++SP+D+++  NA R + GVGP++W+  LA YA +YA  RI  C M HS GPY ENLA 
Sbjct: 23  AQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAA 82

Query: 87  AYEKTTAELTVKFWASEKEFYDPKTKKCVKEECGHFLNLVAKDTTSIGCAEVKCHNNFIF 146
           A+ +  A   VK W  EK FYD  +  CV   CGH+  +V +++  +GCA V+ +N + F
Sbjct: 83  AFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWFF 142

Query: 147 SICDY 152
             C+Y
Sbjct: 143 ITCNY 147

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BLAST of CmoCh19G005350 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.2e-24
Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 1


Query: 27  AESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATCEMEHSDGPYAENLAE 86
           A++  +++++A NA R   GVGP++W+  LA YA +YA  R   C M HSDGPY ENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 87  AYEKTTAELTVKFWASEKEFYDPKTKKCVK-EECGHFLNLVAKDTTSIGCAEVKCHNNFI 146
           A+ +  A   VK W  EK++YD  +  C   + CGH+  +V + +  +GCA V+C++ ++
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWV 140

Query: 147 FSICDY 152
           F  C+Y
Sbjct: 141 FITCNY 146

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BLAST of CmoCh19G005350 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.2e-24
Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 1


Query: 12  IVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATC 71
           ++ +A+  A ++L+ A++SP+D+V   NA RA  GVG VSW+T L  +A +YA  RI  C
Sbjct: 9   LLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDC 68

Query: 72  EMEHSDGPYAENL--AEAYEKTTAELTVKFWASEKEFYDPKTKKCVK-EECGHFLNLVAK 131
           +++HS GPY EN+    A     A   V  W SEK+ YD  +  C   + CGH+  +V +
Sbjct: 69  KLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWR 128

Query: 132 DTTSIGCAEVKCHNN-FIFSICDY 152
            +TSIGCA V C+NN  +F  C+Y
Sbjct: 129 ASTSIGCARVVCNNNRGVFITCNY 152

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BLAST of CmoCh19G005350 vs. Swiss-Prot
Match: PR1_HORVU (Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.1e-24
Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 1


Query: 12  IVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATC 71
           ++ +A+  A ++L+ A++SP+D+V   NA R+  GVG VSW+T L  +A +YA  RI  C
Sbjct: 9   LLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDC 68

Query: 72  EMEHSDGPYAENL--AEAYEKTTAELTVKFWASEKEFYDPKTKKCVK-EECGHFLNLVAK 131
           +++HS GPY EN+    A     A   V  W SEK+ YD  +  C   + CGH+  +V +
Sbjct: 69  KLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWR 128

Query: 132 DTTSIGCAEVKCHNN-FIFSICDY 152
            +TSIGCA V C+NN  +F  C+Y
Sbjct: 129 ASTSIGCARVVCNNNRGVFITCNY 152

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BLAST of CmoCh19G005350 vs. Swiss-Prot
Match: PR1_SAMNI (Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.6e-23
Identity = 57/142 (40.14%), Postives = 87/142 (61.27%), Query Frame = 1


Query: 15  IALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATCEME 74
           +AL++ Q S  +A++SP+D+VDA NA R+   VGPV+W+ ++A +A  YA++R   C + 
Sbjct: 18  VALVMVQYS--VAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLV 77

Query: 75  HSDGP-YAENLA--EAYEKTTAELTVKFWASEKEFYDPKTKKCVK-EECGHFLNLVAKDT 134
           HS  P Y ENLA    +E  T    V  W +E+  Y+P T  C   + CGH+  +V +++
Sbjct: 78  HSGDPRYGENLAFGSGFE-LTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNS 137

Query: 135 TSIGCAEVKCHNNFIFSICDYS 153
             IGCA V+C+N   F  C+YS
Sbjct: 138 VRIGCARVRCNNGAWFITCNYS 156

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BLAST of CmoCh19G005350 vs. TrEMBL
Match: A0A0A0K2C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070230 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.3e-53
Identity = 103/146 (70.55%), Postives = 125/146 (85.62%), Query Frame = 1


Query: 6   FLPALWIVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAK 65
           F+ A  +VG+ LILA IS T+A S+P+D+VDA NAIRA+ GVGPV+WN T+A+YA  YAK
Sbjct: 7   FVFAFCVVGLFLILAPISPTLANSTPQDFVDAHNAIRAKYGVGPVTWNKTIASYAEKYAK 66

Query: 66  TRIATCEMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKEECGHFLNL 125
           T+ ATCEMEHS GPY ENLAEA+EKTTAELTV +WASE +FYD K+ KCV+EECGHFL +
Sbjct: 67  TKTATCEMEHSMGPYGENLAEAFEKTTAELTVNYWASEDKFYDHKSNKCVEEECGHFLQI 126

Query: 126 VAKDTTSIGCAEVKCHNNFIFSICDY 152
           V KDTTSIGCAEVKC+NN+IF+IC+Y
Sbjct: 127 VWKDTTSIGCAEVKCNNNYIFTICNY 152

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BLAST of CmoCh19G005350 vs. TrEMBL
Match: A0A0A0K6A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 6.7e-37
Identity = 77/152 (50.66%), Postives = 110/152 (72.37%), Query Frame = 1


Query: 1   MVYSDFLPALWIVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYA 60
           MV S  +P+  I  ++ +LA  +++ A++SP+D+VD  N IRA  GVGPVSW+ TLA YA
Sbjct: 1   MVSSTIIPST-IFLVSFLLAT-TISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYA 60

Query: 61  LDYAKTRIATCEMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKEECG 120
             YA +++ TCEMEHS+GPY ENLAE Y++ T    V+FWA+EK+FY+    +CV +ECG
Sbjct: 61  QSYADSKMDTCEMEHSNGPYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECG 120

Query: 121 HFLNLVAKDTTSIGCAEVKCHNNFIFSICDYS 153
           H+  +V + TT+IGC  VKC NN++F IC+Y+
Sbjct: 121 HYTQIVWRHTTNIGCGRVKCENNWVFVICNYN 150

[Close]

BLAST of CmoCh19G005350 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36
Identity = 74/137 (54.01%), Postives = 98/137 (71.53%), Query Frame = 1


Query: 15  IALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATCEME 74
           + LI    S+T+A++S +D+V+A NA RA+ GVGPVSWN TLA YA  YA  +I TCEM+
Sbjct: 14  MGLITQLASITLAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYANKKIGTCEMQ 73

Query: 75  HSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKEECGHFLNLVAKDTTSIG 134
           HS GPY ENLAE Y + TA   V FW SEK++YD  + +C+ +EC H+  +V + T  +G
Sbjct: 74  HSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGDECRHYTQVVWRGTKHVG 133

Query: 135 CAEVKCHNNFIFSICDY 152
           CA VKCHNN+IF IC+Y
Sbjct: 134 CARVKCHNNWIFVICNY 150

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BLAST of CmoCh19G005350 vs. TrEMBL
Match: A0A151SI92_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_000685 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.7e-35
Identity = 72/140 (51.43%), Postives = 96/140 (68.57%), Query Frame = 1


Query: 12  IVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATC 71
           +V I ++ +  ++++A++SPKD++DA N  RAE GV P+ WN TL  YA  YA ++I TC
Sbjct: 6   LVLIFIVFSMCNISLAQNSPKDYLDAHNKARAEVGVPPLKWNKTLEAYAQKYADSKIKTC 65

Query: 72  EMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKEECGHFLNLVAKDTT 131
           EMEHS GPY ENLAE Y +      VK W SEK FYD K+ KCVK+EC H+  +VA+ +T
Sbjct: 66  EMEHSYGPYGENLAEGYGELLGTDAVKMWVSEKPFYDVKSNKCVKDECLHYTQVVARKST 125

Query: 132 SIGCAEVKCHNNFIFSICDY 152
            +GCA  KC N +IF IC Y
Sbjct: 126 HLGCARSKCDNGWIFVICSY 145

[Close]

BLAST of CmoCh19G005350 vs. TrEMBL
Match: A0A0A0K7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-34
Identity = 77/159 (48.43%), Postives = 105/159 (66.04%), Query Frame = 1


Query: 1   MVYSDFLPALWIVGIALIL------AQISLTIAESSPKDWVDATNAIRAENGVGPVSWNT 60
           M +++ L  L ++G+ L L      A  + ++A+SSPK+++DA NA+RA  GV P+ WN+
Sbjct: 1   MGFANILSTLCLLGLTLTLTLTLTLASTAPSLAKSSPKNYIDAHNAVRAAVGVEPLHWNS 60

Query: 61  TLATYALDYAKTRIATCEMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKC 120
           TLA YA +YA T+IATC+MEHS GPY ENLAE  E  TAE  V  WA EK+ YD  +  C
Sbjct: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120

Query: 121 VKE--ECGHFLNLVAKDTTSIGCAEVKCHNNFIFSICDY 152
             +   C H+  LV  +T S+GCA+VKC NN++F IC Y
Sbjct: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSY 159

[Close]

BLAST of CmoCh19G005350 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 57/147 (38.78%), Postives = 90/147 (61.22%), Query Frame = 1


Query: 8   PALWIVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTR 67
           P L IV I+ ++     T A+++P+D++++ N  RA+ GV  V W+TTLA YAL+Y+  R
Sbjct: 7   PFLVIVAISFLVVA---TNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFR 66

Query: 68  IATCEMEHSDGPYAENLAEAYEKTTAELT-VKFWASEKEFYDPKTKKCV-KEECGHFLNL 127
            A C + HS+GPY ENLA+    + + ++ VK W  EK +Y      C   ++C H+  +
Sbjct: 67  KADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQV 126

Query: 128 VAKDTTSIGCAEVKCHNNFIFSICDYS 153
           V +D+  IGCA V+C N + F  C+Y+
Sbjct: 127 VWRDSVKIGCARVQCTNTWWFVSCNYN 150

[Close]

BLAST of CmoCh19G005350 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 105.5 bits (262), Expect = 2.9e-23
Identity = 51/123 (41.46%), Postives = 74/123 (60.16%), Query Frame = 1


Query: 31  PKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATCEMEHSDGPYAENLAEAYEK 90
           P++ +   N  RA  GVGP+ WN TLATYA  YA  R   C M+HS GP+ ENLA  +  
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 91  TTAELTVKFWASEKEFYDPKTKKCVKE-ECGHFLNLVAKDTTSIGCAEVKCHNN-FIFSI 150
            +  +  ++W +EKE YD  +  C  +  CGH+  +V +D+  +GCA V+C N+ +I+ I
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWVI 161

Query: 151 CDY 152
           C Y
Sbjct: 162 CSY 164

[Close]

BLAST of CmoCh19G005350 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 51/140 (36.43%), Postives = 77/140 (55.00%), Query Frame = 1


Query: 13  VGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATCE 72
           + I   L  I    A+ SP+D++   N  RAE GVGP+ W+  +A YA +YA  R   C 
Sbjct: 12  LAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCA 71

Query: 73  MEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCV-KEECGHFLNLVAKDTT 132
           M+HS G Y EN+A +    T    V  W  E+  YD  +  C   ++CGH+  +V +++ 
Sbjct: 72  MKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSE 131

Query: 133 SIGCAEVKCHNNFIFSICDY 152
            +GCA+V+C+N   F  C+Y
Sbjct: 132 RLGCAKVRCNNGQTFITCNY 151

[Close]

BLAST of CmoCh19G005350 vs. TAIR10
Match: AT2G19970.1 (AT2G19970.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-22
Identity = 51/136 (37.50%), Postives = 77/136 (56.62%), Query Frame = 1


Query: 26  IAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYA--KTRIATCE---MEHSDGPY 85
           I +  P+  +   N IRA  GV P+ WN T+A YA  +A  + +   C+   M HSDGPY
Sbjct: 30  IKDVQPRKTLKVHNQIRAAVGVAPLKWNKTVAAYAQKFANRQAKAGVCDYSSMRHSDGPY 89

Query: 86  AENLAEAY----EKTTAELTVKFWASEKEFYDPKTKKCVKEECGHFLNLVAKDTTSIGCA 145
            EN+A  +    ++ +  +  K+W +EK  YD  T KC K+ CGH+  +VA  + S+GC 
Sbjct: 90  GENIAAGWVQPKDQMSGPIAAKYWLTEKPNYDHATNKC-KDVCGHYTQMVANQSLSLGCG 149

Query: 146 EVKCH-NNFIFSICDY 152
             +CH N  I+ +C+Y
Sbjct: 150 SFRCHENELIYIVCNY 164

[Close]

BLAST of CmoCh19G005350 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-21
Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 1


Query: 12  IVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAKTRIATC 71
           I+  AL+ A +    A+ S +D+V+A N  R++ GVGP+ W+  LA YA +YA      C
Sbjct: 11  IILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDC 70

Query: 72  EMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKEECGHFLNLVAKDTT 131
            + HS GPY ENLA++    +    V  W +EK  Y+  T  C    CGH+  +V +++ 
Sbjct: 71  RLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSV 130

Query: 132 SIGCAEVKCHNNFIFSICDY 152
            +GCA+V+C+N      C+Y
Sbjct: 131 RLGCAKVRCNNGGTIISCNY 149

[Close]

BLAST of CmoCh19G005350 vs. NCBI nr
Match: gi|659110141|ref|XP_008455070.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 6.0e-55
Identity = 105/146 (71.92%), Postives = 129/146 (88.36%), Query Frame = 1


Query: 6   FLPALWIVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAK 65
           F+ A  +VG++LILA IS TIA+SSP+++VDA NAIRA+ GVGPV+WN TLA+YA +YAK
Sbjct: 7   FVSAFCVVGLSLILAPISPTIAKSSPQEFVDAHNAIRAKYGVGPVTWNKTLASYAENYAK 66

Query: 66  TRIATCEMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKEECGHFLNL 125
           TR+ATCEMEHS GPY ENLAEA+EKTTAELTV +WA+E +FYD K+ KCV+EECGHFL +
Sbjct: 67  TRVATCEMEHSMGPYGENLAEAFEKTTAELTVNYWATEDKFYDHKSNKCVEEECGHFLQV 126

Query: 126 VAKDTTSIGCAEVKCHNNFIFSICDY 152
           V KDTTSIGCAEVKC+NN+IF+IC+Y
Sbjct: 127 VWKDTTSIGCAEVKCNNNYIFTICNY 152

[Close]

BLAST of CmoCh19G005350 vs. NCBI nr
Match: gi|449438606|ref|XP_004137079.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-53
Identity = 103/146 (70.55%), Postives = 125/146 (85.62%), Query Frame = 1


Query: 6   FLPALWIVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYALDYAK 65
           F+ A  +VG+ LILA IS T+A S+P+D+VDA NAIRA+ GVGPV+WN T+A+YA  YAK
Sbjct: 7   FVFAFCVVGLFLILAPISPTLANSTPQDFVDAHNAIRAKYGVGPVTWNKTIASYAEKYAK 66

Query: 66  TRIATCEMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKEECGHFLNL 125
           T+ ATCEMEHS GPY ENLAEA+EKTTAELTV +WASE +FYD K+ KCV+EECGHFL +
Sbjct: 67  TKTATCEMEHSMGPYGENLAEAFEKTTAELTVNYWASEDKFYDHKSNKCVEEECGHFLQI 126

Query: 126 VAKDTTSIGCAEVKCHNNFIFSICDY 152
           V KDTTSIGCAEVKC+NN+IF+IC+Y
Sbjct: 127 VWKDTTSIGCAEVKCNNNYIFTICNY 152

[Close]

BLAST of CmoCh19G005350 vs. NCBI nr
Match: gi|659110139|ref|XP_008455069.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-38
Identity = 80/153 (52.29%), Postives = 107/153 (69.93%), Query Frame = 1


Query: 1   MVYSDFLPALWIVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYA 60
           M +++ L    ++G+ L LA  +  +A+S PK++VDA NAIRAE GV P+ WN+TLA YA
Sbjct: 1   MGFANILSTFCLLGLTLTLASTAPILAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYA 60

Query: 61  LDYAKTRIATCEMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKE--E 120
            +YA T+IATC+MEHS GPY ENLAE YE+ TAE+ V  WA EK+ YD  +  C  +   
Sbjct: 61  QNYANTKIATCQMEHSGGPYGENLAEGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASN 120

Query: 121 CGHFLNLVAKDTTSIGCAEVKCHNNFIFSICDY 152
           C H+  LV ++T S+GCAEVKC NN++F IC Y
Sbjct: 121 CLHYTQLVWRNTKSVGCAEVKCQNNWVFLICSY 153

[Close]

BLAST of CmoCh19G005350 vs. NCBI nr
Match: gi|659110137|ref|XP_008455068.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 162.9 bits (411), Expect = 4.3e-37
Identity = 78/152 (51.32%), Postives = 108/152 (71.05%), Query Frame = 1


Query: 1   MVYSDFLPALWIVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYA 60
           MV S  +    I  ++ +LA  +++ A++SP+D+VD  N IRA  GVGPVSW+ TLA YA
Sbjct: 1   MVSSTIIILSTICLVSFLLAT-TISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYA 60

Query: 61  LDYAKTRIATCEMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKEECG 120
             YA ++I TCEMEHS+GPY ENLAE Y++ T    VKFWA+EK+FY+    +CV +ECG
Sbjct: 61  QSYADSKIDTCEMEHSNGPYGENLAEGYDEMTGVEAVKFWATEKKFYNHHLNRCVGDECG 120

Query: 121 HFLNLVAKDTTSIGCAEVKCHNNFIFSICDYS 153
           H+  +V + TT+IGC  VKC NN++F IC+Y+
Sbjct: 121 HYTQIVWRHTTNIGCGRVKCENNWVFVICNYN 151

[Close]

BLAST of CmoCh19G005350 vs. NCBI nr
Match: gi|449438291|ref|XP_004136922.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 9.6e-37
Identity = 77/152 (50.66%), Postives = 110/152 (72.37%), Query Frame = 1


Query: 1   MVYSDFLPALWIVGIALILAQISLTIAESSPKDWVDATNAIRAENGVGPVSWNTTLATYA 60
           MV S  +P+  I  ++ +LA  +++ A++SP+D+VD  N IRA  GVGPVSW+ TLA YA
Sbjct: 1   MVSSTIIPST-IFLVSFLLAT-TISNAQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYA 60

Query: 61  LDYAKTRIATCEMEHSDGPYAENLAEAYEKTTAELTVKFWASEKEFYDPKTKKCVKEECG 120
             YA +++ TCEMEHS+GPY ENLAE Y++ T    V+FWA+EK+FY+    +CV +ECG
Sbjct: 61  QSYADSKMDTCEMEHSNGPYGENLAEGYDEMTGVEAVRFWATEKKFYNHHLNRCVGDECG 120

Query: 121 HFLNLVAKDTTSIGCAEVKCHNNFIFSICDYS 153
           H+  +V + TT+IGC  VKC NN++F IC+Y+
Sbjct: 121 HYTQIVWRHTTNIGCGRVKCENNWVFVICNYN 150

The following BLAST results are available for this feature:

BLAST of CmoCh19G005350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	1.1e-27	44.00	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1A_SOLLC	4.2e-24	40.48	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR13_HORVU	4.2e-24	41.67	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1	[more]
PR1_HORVU	7.1e-24	40.97	Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1	[more]
PR1_SAMNI	4.6e-23	40.14	Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1	[more]

BLAST of CmoCh19G005350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2C5_CUCSA	2.3e-53	70.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070230 PE=4 SV=1	[more]
A0A0A0K6A0_CUCSA	6.7e-37	50.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1	[more]
A0A0A0K4C1_CUCSA	1.1e-36	54.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1	[more]
A0A151SI92_CAJCA	3.7e-35	51.43	Uncharacterized protein OS=Cajanus cajan GN=KK1_000685 PE=3 SV=1	[more]
A0A0A0K7N5_CUCSA	1.4e-34	48.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1	[more]

BLAST of CmoCh19G005350 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50060.1	1.2e-24	38.78	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G19990.1	2.9e-23	41.46	pathogenesis-related protein-1-like	[more]
AT4G33720.1	1.9e-22	36.43	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G19970.1	1.9e-22	37.50	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	2.1e-21	36.43	basic pathogenesis-related protein 1	[more]

BLAST of CmoCh19G005350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110141\|ref\|XP_008455070.1\|	6.0e-55	71.92	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|449438606\|ref\|XP_004137079.1\|	3.3e-53	70.55	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110139\|ref\|XP_008455069.1\|	1.0e-38	52.29	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|659110137\|ref\|XP_008455068.1\|	4.3e-37	51.32	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|449438291\|ref\|XP_004136922.1\|	9.6e-37	50.66	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G005350.1	CmoCh19G005350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 96..109 score: 2.8E-7coord: 50..68 score: 2.8E-7coord: 146..152 score: 2.8E-7coord: 119..135 score: 2.
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 12..152 score: 3.3
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 29..152 score: 6.5
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 35..151 score: 1.9
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 29..152 score: 2.7
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 29..152 score: 2.49
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 12..152 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G005350	Cla001629	Watermelon (97103) v1	cmowmB496

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G005350	Bottle gourd (USVL1VR-Ls)	cmolsiB467
CmoCh19G005350	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G005350	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G005350	Melon (DHL92) v3.6.1	cmomedB523
CmoCh19G005350	Melon (DHL92) v3.6.1	cmomedB550
CmoCh19G005350	Silver-seed gourd	carcmoB0615
CmoCh19G005350	Silver-seed gourd	carcmoB0998
CmoCh19G005350	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G005350	Watermelon (97103) v2	cmowmbB505
CmoCh19G005350	Watermelon (97103) v2	cmowmbB512
CmoCh19G005350	Wax gourd	cmowgoB0635
CmoCh19G005350	Wax gourd	cmowgoB0642
CmoCh19G005350	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G005350	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh19G005350	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G005350	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G005350	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G005350	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G005350	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G005350	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G005350	Melon (DHL92) v3.5.1	cmomeB475
CmoCh19G005350	Watermelon (Charleston Gray)	cmowcgB454
CmoCh19G005350	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G005350	Watermelon (97103) v1	cmowmB478
CmoCh19G005350	Watermelon (97103) v1	cmowmB497
CmoCh19G005350	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G005350	Cucurbita pepo (Zucchini)	cmocpeB494