ClCG11G003410 (gene) Watermelon (Charleston Gray)

Overview
NameClCG11G003410
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionActin-related protein 2/3 complex subunit
LocationCG_Chr11 : 3570317 .. 3572204 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGAGTAAAATGGCAAGAAGAAGACGGTGACGGAATTACCCGAAACGAAGAAACCCCTTTCTCCGATCCCCACCATTAGCTTCGGCGTTGCCCCTGAAATTTCCGGTTTCTTTTCCGACTCCGATCCGCTCATCGGAACAGAAATATCTCCGGTAAGTCTCATCGGAATCATAATTACACATTCTGCGTACTTCAAAGTGAGAGTCGATCGAACTGCGGATTTCGATTTTTTTTTTTTTTCTGCAAAATTCGATCCTCAGGCTTCTAGAGAATCGGTATTCGTTAGATTGAATTGATAATTAAAGGATTCATTTCTAAAGTACCTGTTGGAGACTGGAATTATTGCTTAGAGAGATCGATTCCGTGACTCTCATGTTTTCTCCTACAATCTTTGCAGTTGGGAAGAATTCGGAGCTCGGATAGAAGTTTAAGGCGTTGGTTATTGAGATTAATAATGGTGAGTTTTCAAGTTTTCGAAAGCTTTAACGTTTTTTCTCGATGTTAATGTAGCATTGGAGGGATTAGAGGAAACTTGTACGTATTTTTGATCGCATTGAGCAATTTTAATGGATTAATTTTATCGAATTTGAAATGGGTATTTTTCTATTCATGGGTTGAATTAGAATTGAACGGGTGGTTTTCTTCTAGGTTCACCATTCTAGCTTTGTCGATGAGGAAGGAATAAGCAAGGCTTGTGGCTGTCCTTTACTTCCTTTGAAAAGTCACATAAAGGGTCCTGCTCCAGTTTCAGATCAAGGTTTAGCTCAACTCTAATTTGTTTATTTTGTTTGTAGAACATACCATCTCTCTATATGTTTCATACTGAAATTTATCTTGTTTGGAAATTCACAGATAAGACTGATATTGTAGATGAAGCGATTACATTCTTTCGCGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGTCCTGCTGATAAGCTTCTTATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGACTTGAAGGTTGCAGAACCTTGGCTGTAGGAACCAAGGCAATAATTAACTTGGGTTTGGAGAATGTTCCCGTGCCCGGAGAGTCGGGCTTTCCCTTTCCTGGACTCTTCCCTATTCCCCAATCTAATGAGGAAGCAGGTGAAGCTTGATCTTAGTTTTCTCTATACCTTCTACTAGCATTTGTTACTAGCATTTCTTAACTAGAAATGCTTACATTTAAAGATGCTCCACTACCCAATGTTGATCAACTTTGTCATTTGCAATTGGCTTTATTTGCTGCATACAGATTAGGCACTCTGTTCCTTTTTCAGCATTTCACACAATTTATATCAGTACAACATTATTTTCCCAGATGAAGATATCTTTTCCAATTCAGTTGATGCGGATATTATGAGTTAATCTTGTGTGCCATTAGCCTCCTGTTTCTTGTCTTAATATTGACAATTTTCATAAGCTTCTAATATGTCCAATTTTATATGCAGAGCTATTCAGGAATTATTTGAAGCAGATAAGAGAAGAGACAAGTGGGAGACTCTTGAGTGTTGCCTATAGAGCCAATGGGACTCCAAATAAATGGTGGTTAGCATTTGCAAAGAGGAAGTTCATGAACATCATCATTCCTTGATCAAATTACTTCCAAGACTGTAGATGTGAAAGTTATGAACATCATCATTCCTCGATCACATGGGCTTTTGTGGTTTCTACTGGAACTTTAGAAGTTAGTTTGTATGAACAGAATCTGAATGTTATATTAGTTTATGATAATGCATGTCAAACTCATCAGAAGCTAGGTCATATTCTTTTTCTTTTTAATAATGATCTTAAATGTAATGTGCTGTCATTTCACAAGTTCTGTACATTAATTACACTAACCATCTTAATCAGAAGGAATAGTTCATGTC

mRNA sequence

GAAAGAGTAAAATGGCAAGAAGAAGACGGTGACGGAATTACCCGAAACGAAGAAACCCCTTTCTCCGATCCCCACCATTAGCTTCGGCGTTGCCCCTGAAATTTCCGGTTTCTTTTCCGACTCCGATCCGCTCATCGGAACAGAAATATCTCCGTTGGGAAGAATTCGGAGCTCGGATAGAAGTTTAAGGCGTTGGTTATTGAGATTAATAATGGTTCACCATTCTAGCTTTGTCGATGAGGAAGGAATAAGCAAGGCTTGTGGCTGTCCTTTACTTCCTTTGAAAAGTCACATAAAGGGTCCTGCTCCAGTTTCAGATCAAGATAAGACTGATATTGTAGATGAAGCGATTACATTCTTTCGCGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGTCCTGCTGATAAGCTTCTTATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGACTTGAAGGTTGCAGAACCTTGGCTGTAGGAACCAAGGCAATAATTAACTTGGGTTTGGAGAATGTTCCCGTGCCCGGAGAGTCGGGCTTTCCCTTTCCTGGACTCTTCCCTATTCCCCAATCTAATGAGGAAGCAGAGCTATTCAGGAATTATTTGAAGCAGATAAGAGAAGAGACAAGTGGGAGACTCTTGAGTGTTGCCTATAGAGCCAATGGGACTCCAAATAAATGGTGGTTAGCATTTGCAAAGAGGAAGTTCATGAACATCATCATTCCTTGATCAAATTACTTCCAAGACTGTAGATGTGAAAGTTATGAACATCATCATTCCTCGATCACATGGGCTTTTGTGGTTTCTACTGGAACTTTAGAAGTTAGTTTGTATGAACAGAATCTGAATGTTATATTAGTTTATGATAATGCATGTCAAACTCATCAGAAGCTAGGTCATATTCTTTTTCTTTTTAATAATGATCTTAAATGTAATGTGCTGTCATTTCACAAGTTCTGTACATTAATTACACTAACCATCTTAATCAGAAGGAATAGTTCATGTC

Coding sequence (CDS)

ATGGTTCACCATTCTAGCTTTGTCGATGAGGAAGGAATAAGCAAGGCTTGTGGCTGTCCTTTACTTCCTTTGAAAAGTCACATAAAGGGTCCTGCTCCAGTTTCAGATCAAGATAAGACTGATATTGTAGATGAAGCGATTACATTCTTTCGCGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGTCCTGCTGATAAGCTTCTTATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGACTTGAAGGTTGCAGAACCTTGGCTGTAGGAACCAAGGCAATAATTAACTTGGGTTTGGAGAATGTTCCCGTGCCCGGAGAGTCGGGCTTTCCCTTTCCTGGACTCTTCCCTATTCCCCAATCTAATGAGGAAGCAGAGCTATTCAGGAATTATTTGAAGCAGATAAGAGAAGAGACAAGTGGGAGACTCTTGAGTGTTGCCTATAGAGCCAATGGGACTCCAAATAAATGGTGGTTAGCATTTGCAAAGAGGAAGTTCATGAACATCATCATTCCTTGA

Protein sequence

MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIPQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Homology
[Close]
BLAST of ClCG11G003410 vs. Swiss-Prot
Match: ARPC3_ARATH (Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana GN=ARPC3 PE=1 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.0e-90
Identity = 157/173 (90.75%), Postives = 168/173 (97.11%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFVDEEG++KACGCPLLPLKSHIKGPAPVS+QDKTDIVDEAITFFRANVFF NFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE++PVPGE+GFPFPGLF +
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIII 174
           PQS +EAELFRNYLKQ+REETSGRLLSVAYRANGTPNKWWLAFAKRKFMN+++
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173

[Close]
BLAST of ClCG11G003410 vs. Swiss-Prot
Match: ARPC3_MOUSE (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3)

HSP 1 Score: 159.5 bits (402), Expect = 3.4e-38
Identity = 81/170 (47.65%), Postives = 112/170 (65.88%), Query Frame = 1 

Query: 3   HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 62
           +HSS +D +  +K  G   LLPL+S  KGPAP   +D TDIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPLRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 122
           K+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+ N P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 QSNEEAELFRNYLKQIREETSGRLLSVAY-RANGTPNKWWLAFAKRKFMN 171
            S +E E+ R YL+Q+R+ET  RL    +   +  P+KWW  F KR+FMN
Sbjct: 124 ASKQEDEMMRAYLQQLRQETGLRLCEKVFDPQSDKPSKWWTCFVKRQFMN 170

[Close]
BLAST of ClCG11G003410 vs. Swiss-Prot
Match: ARPC3_BOVIN (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 159.1 bits (401), Expect = 4.5e-38
Identity = 80/170 (47.06%), Postives = 112/170 (65.88%), Query Frame = 1 

Query: 3   HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 62
           +HSS +D +  +K  G   LLP++S  KGPAP   +D TDIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 122
           K+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+ N P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 QSNEEAELFRNYLKQIREETSGRLLSVAY-RANGTPNKWWLAFAKRKFMN 171
            + +E E+ R YL+Q+R+ET  RL    +   N  P+KWW  F KR+FMN
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170

[Close]
BLAST of ClCG11G003410 vs. Swiss-Prot
Match: ARPC3_HUMAN (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3)

HSP 1 Score: 159.1 bits (401), Expect = 4.5e-38
Identity = 80/170 (47.06%), Postives = 112/170 (65.88%), Query Frame = 1 

Query: 3   HHSSFVDEEGISKACG-CPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDI 62
           +HSS +D +  +K  G   LLP++S  KGPAP   +D TDIVDEAI +F+ANVFF+N++I
Sbjct: 4   YHSSLMDPD--TKLIGNMALLPIRSQFKGPAPRETKD-TDIVDEAIYYFKANVFFKNYEI 63

Query: 63  KSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIP 122
           K+ AD+ LIY+T YI+  LK+L+ C + + G K +  LG+ N P+PGE GFP   ++  P
Sbjct: 64  KNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGFPLNAIYAKP 123

Query: 123 QSNEEAELFRNYLKQIREETSGRLLSVAY-RANGTPNKWWLAFAKRKFMN 171
            + +E E+ R YL+Q+R+ET  RL    +   N  P+KWW  F KR+FMN
Sbjct: 124 ANKQEDEVMRAYLQQLRQETGLRLCEKVFDPQNDKPSKWWTCFVKRQFMN 170

[Close]
BLAST of ClCG11G003410 vs. Swiss-Prot
Match: ARPC3_SCHPO (Actin-related protein 2/3 complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arc3 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33
Identity = 74/169 (43.79%), Postives = 101/169 (59.76%), Query Frame = 1 

Query: 3   HHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIK 62
           +HSSF+    +       +LPLK+  +GPA  +D+ + DI+DE I  FRAN FFRNF+IK
Sbjct: 4   YHSSFLSLTDVPTTGNIAMLPLKTKFRGPAYPADESQMDIIDECIGLFRANCFFRNFEIK 63

Query: 63  SPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIPQ 122
            PAD+ LIY T +I+  L R+ G        + + +L LEN  +PG +GFP   L+  P 
Sbjct: 64  GPADRTLIYGTLFISECLGRVNGL-NYRDAERQLNSLALENFSIPGSAGFPLNALYAPPL 123

Query: 123 SNEEAELFRNYLKQIREETSGRLLSVAYRA-NGTPNKWWLAFAKRKFMN 171
           S ++AE+ R YL Q R+E + RLLS  Y      P+KWW  F+KR+FMN
Sbjct: 124 SPQDAEIMRTYLTQFRQELAYRLLSHVYATEKDHPSKWWTCFSKRRFMN 171

[Close]
BLAST of ClCG11G003410 vs. TrEMBL
Match: A0A0A0LI55_CUCSA (Actin-related protein 2/3 complex subunit 3 OS=Cucumis sativus GN=Csa_2G008100 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 4.0e-94
Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI
Sbjct: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 174

[Close]
BLAST of ClCG11G003410 vs. TrEMBL
Match: I1MU29_SOYBN (Actin-related protein 2/3 complex subunit 3 OS=Glycine max GN=GLYMA_17G108800 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 7.8e-90
Identity = 162/174 (93.10%), Postives = 171/174 (98.28%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFV+E+G+S+ACGCPLLPLKSHIKGPAPVSDQD+TDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSPADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLE VPVPGESGFPFPGLFP+
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           PQS++EAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIIP 174

[Close]
BLAST of ClCG11G003410 vs. TrEMBL
Match: G7JGJ3_MEDTR (Actin-related protein 2/3 complex subunit 3 OS=Medicago truncatula GN=MTR_4g115900 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 3.9e-89
Identity = 160/172 (93.02%), Postives = 170/172 (98.84%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFVD+EGI++ACGCPLLPLKSHIKGPAPVSDQD+TDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDDEGINRACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSPADKLLIYLTFYINVALK+LEGCRTLA GTKAIINLGLENVPVPGESGFPFPGLFP+
Sbjct: 61  IKSPADKLLIYLTFYINVALKKLEGCRTLAEGTKAIINLGLENVPVPGESGFPFPGLFPL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNII 173
           PQS++EAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMN+I
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNVI 172

[Close]
BLAST of ClCG11G003410 vs. TrEMBL
Match: I1LZT5_SOYBN (Actin-related protein 2/3 complex subunit 3 OS=Glycine max GN=GLYMA_13G162500 PE=3 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 6.6e-89
Identity = 161/174 (92.53%), Postives = 170/174 (97.70%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFV+E+G+S+ACGC LLPLKSHIKGPAPVSDQD+TDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCSLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSPADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLE VPVPGESGFPFPGLFP+
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           PQS++EAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIIP 174

[Close]
BLAST of ClCG11G003410 vs. TrEMBL
Match: D7T4W9_VITVI (Actin-related protein 2/3 complex subunit 3 OS=Vitis vinifera GN=VIT_11s0118g00300 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 4.3e-88
Identity = 161/174 (92.53%), Postives = 166/174 (95.40%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVD+EGI+KACGCPLLPLKSHIKGPAPVSDQD+TDIVDEAITFFRANVFFRNFD
Sbjct: 20  MVHHSSFVDDEGITKACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 79

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLE VPVPGESGFPFPGLF +
Sbjct: 80  IKSSADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFAL 139

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           P S  EAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNII+P
Sbjct: 140 PLSQPEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIVP 193

[Close]
BLAST of ClCG11G003410 vs. TAIR10
Match: AT1G60430.1 (AT1G60430.1 actin-related protein C3)

HSP 1 Score: 334.0 bits (855), Expect = 5.7e-92
Identity = 157/173 (90.75%), Postives = 168/173 (97.11%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFVDEEG++KACGCPLLPLKSHIKGPAPVS+QDKTDIVDEAITFFRANVFF NFD
Sbjct: 1   MVYHSSFVDEEGVTKACGCPLLPLKSHIKGPAPVSEQDKTDIVDEAITFFRANVFFTNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLE++PVPGE+GFPFPGLF +
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLEDIPVPGETGFPFPGLFSL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIII 174
           PQS +EAELFRNYLKQ+REETSGRLLSVAYRANGTPNKWWLAFAKRKFMN+++
Sbjct: 121 PQSQDEAELFRNYLKQVREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNVVV 173

[Close]
BLAST of ClCG11G003410 vs. NCBI nr
Match: gi|659070910|ref|XP_008457213.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis melo])

HSP 1 Score: 356.7 bits (914), Expect = 2.3e-95
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 174

[Close]
BLAST of ClCG11G003410 vs. NCBI nr
Match: gi|778666246|ref|XP_011648714.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 5.7e-94
Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKS ADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI
Sbjct: 61  IKSAADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           PQSNEEAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRTNGTPNKWWLAFAKRKFMNIIIP 174

[Close]
BLAST of ClCG11G003410 vs. NCBI nr
Match: gi|356562945|ref|XP_003549728.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Glycine max])

HSP 1 Score: 337.8 bits (865), Expect = 1.1e-89
Identity = 162/174 (93.10%), Postives = 171/174 (98.28%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFV+E+G+S+ACGCPLLPLKSHIKGPAPVSDQD+TDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSPADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLE VPVPGESGFPFPGLFP+
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           PQS++EAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIIP 174

[Close]
BLAST of ClCG11G003410 vs. NCBI nr
Match: gi|357478341|ref|XP_003609456.1| (actin-related protein 2/3 complex subunit 3 [Medicago truncatula])

HSP 1 Score: 335.5 bits (859), Expect = 5.6e-89
Identity = 160/172 (93.02%), Postives = 170/172 (98.84%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFVD+EGI++ACGCPLLPLKSHIKGPAPVSDQD+TDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVDDEGINRACGCPLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSPADKLLIYLTFYINVALK+LEGCRTLA GTKAIINLGLENVPVPGESGFPFPGLFP+
Sbjct: 61  IKSPADKLLIYLTFYINVALKKLEGCRTLAEGTKAIINLGLENVPVPGESGFPFPGLFPL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNII 173
           PQS++EAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMN+I
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNVI 172

[Close]
BLAST of ClCG11G003410 vs. NCBI nr
Match: gi|356548532|ref|XP_003542655.1| (PREDICTED: actin-related protein 2/3 complex subunit 3-like [Glycine max])

HSP 1 Score: 334.7 bits (857), Expect = 9.5e-89
Identity = 161/174 (92.53%), Postives = 170/174 (97.70%), Query Frame = 1 

Query: 1   MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFD 60
           MV+HSSFV+E+G+S+ACGC LLPLKSHIKGPAPVSDQD+TDIVDEAITFFRANVFFRNFD
Sbjct: 1   MVYHSSFVNEDGVSRACGCSLLPLKSHIKGPAPVSDQDRTDIVDEAITFFRANVFFRNFD 60

Query: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPI 120
           IKSPADKLLIYLTFYINVALKRLEGCRTLA GTKAIINLGLE VPVPGESGFPFPGLFP+
Sbjct: 61  IKSPADKLLIYLTFYINVALKRLEGCRTLAEGTKAIINLGLEKVPVPGESGFPFPGLFPL 120

Query: 121 PQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP 175
           PQS++EAELFRNYLKQIREETSGRLLSVAYR NGTPNKWWLAFAKRKFMNIIIP
Sbjct: 121 PQSHKEAELFRNYLKQIREETSGRLLSVAYRPNGTPNKWWLAFAKRKFMNIIIP 174

The following BLAST results are available for this feature:
BLAST of ClCG11G003410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARPC3_ARATH1.0e-9090.75Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana GN=ARPC3 PE=... [more]
ARPC3_MOUSE3.4e-3847.65Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3[more]
ARPC3_BOVIN4.5e-3847.06Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3[more]
ARPC3_HUMAN4.5e-3847.06Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3[more]
ARPC3_SCHPO1.1e-3343.79Actin-related protein 2/3 complex subunit 3 OS=Schizosaccharomyces pombe (strain... [more]
BLAST of ClCG11G003410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI55_CUCSA4.0e-9498.85Actin-related protein 2/3 complex subunit 3 OS=Cucumis sativus GN=Csa_2G008100 P... [more]
I1MU29_SOYBN7.8e-9093.10Actin-related protein 2/3 complex subunit 3 OS=Glycine max GN=GLYMA_17G108800 PE... [more]
G7JGJ3_MEDTR3.9e-8993.02Actin-related protein 2/3 complex subunit 3 OS=Medicago truncatula GN=MTR_4g1159... [more]
I1LZT5_SOYBN6.6e-8992.53Actin-related protein 2/3 complex subunit 3 OS=Glycine max GN=GLYMA_13G162500 PE... [more]
D7T4W9_VITVI4.3e-8892.53Actin-related protein 2/3 complex subunit 3 OS=Vitis vinifera GN=VIT_11s0118g003... [more]
BLAST of ClCG11G003410 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G60430.15.7e-9290.75 actin-related protein C3[more]
BLAST of ClCG11G003410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659070910|ref|XP_008457213.1|2.3e-95100.00PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis melo][more]
gi|778666246|ref|XP_011648714.1|5.7e-9498.85PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis sativus][more]
gi|356562945|ref|XP_003549728.1|1.1e-8993.10PREDICTED: actin-related protein 2/3 complex subunit 3 [Glycine max][more]
gi|357478341|ref|XP_003609456.1|5.6e-8993.02actin-related protein 2/3 complex subunit 3 [Medicago truncatula][more]
gi|356548532|ref|XP_003542655.1|9.5e-8992.53PREDICTED: actin-related protein 2/3 complex subunit 3-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007204ARPC3
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0009407 toxin catabolic process
biological_process GO:0030833 regulation of actin filament polymerization
biological_process GO:0009247 glycolipid biosynthetic process
biological_process GO:0030259 lipid glycosylation
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006796 phosphate-containing compound metabolic process
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005856 cytoskeleton
molecular_function GO:0003779 actin binding
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G003410.1ClCG11G003410.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007204Actin-related protein 2/3 complex subunit 3GENE3DG3DSA:1.10.1760.10coord: 2..170
score: 1.3
IPR007204Actin-related protein 2/3 complex subunit 3PIRPIRSF016315p21-ARCcoord: 1..173
score: 7.1
IPR007204Actin-related protein 2/3 complex subunit 3PANTHERPTHR12391ARP2/3 COMPLEX 21 KD SUBUNITcoord: 1..173
score: 2.9E
IPR007204Actin-related protein 2/3 complex subunit 3PFAMPF04062P21-Arccoord: 3..170
score: 2.8
IPR007204Actin-related protein 2/3 complex subunit 3unknownSSF69060Arp2/3 complex 21 kDa subunit ARPC3coord: 3..170
score: 6.02

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG11G003410Csa2G008100Cucumber (Chinese Long) v2cuwcgB096
ClCG11G003410MELO3C004473Melon (DHL92) v3.5.1mewcgB368
ClCG11G003410Cla016675Watermelon (97103) v1wcgwmB107
ClCG11G003410Cla97C11G209900Watermelon (97103) v2wcgwmbB065
ClCG11G003410Bhi06G001604Wax gourdwcgwgoB150
ClCG11G003410CSPI02G02070Wild cucumber (PI 183967)cpiwcgB102
ClCG11G003410Cucsa.132460Cucumber (Gy14) v1cgywcgB217
ClCG11G003410CmaCh05G012630Cucurbita maxima (Rimu)cmawcgB689
ClCG11G003410CmoCh05G012910Cucurbita moschata (Rifu)cmowcgB695
ClCG11G003410Lsi11G003530Bottle gourd (USVL1VR-Ls)lsiwcgB078
ClCG11G003410Cp4.1LG11g10520Cucurbita pepo (Zucchini)cpewcgB097
ClCG11G003410CsGy2G002160Cucumber (Gy14) v2cgybwcgB094
ClCG11G003410MELO3C004473.2Melon (DHL92) v3.6.1medwcgB363
ClCG11G003410Carg10930Silver-seed gourdcarwcgB0553
ClCG11G003410CsaV3_2G003270Cucumber (Chinese Long) v3cucwcgB112
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG11G003410Cucumber (Gy14) v2cgybwcgB187
ClCG11G003410Silver-seed gourdcarwcgB0244
ClCG11G003410Silver-seed gourdcarwcgB0612
ClCG11G003410Watermelon (97103) v2wcgwmbB083
ClCG11G003410Watermelon (Charleston Gray)wcgwcgB069
ClCG11G003410Cucurbita maxima (Rimu)cmawcgB147
ClCG11G003410Cucurbita moschata (Rifu)cmowcgB134
ClCG11G003410Watermelon (97103) v1wcgwmB095
ClCG11G003410Cucurbita pepo (Zucchini)cpewcgB586
ClCG11G003410Cucurbita pepo (Zucchini)cpewcgB718
ClCG11G003410Bottle gourd (USVL1VR-Ls)lsiwcgB354
ClCG11G003410Bottle gourd (USVL1VR-Ls)lsiwcgB392