ClCG11G003410.1 (mRNA) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGAGTAAAATGGCAAGAAGAAGACGGTGACGGAATTACCCGAAACGAAGAAACCCCTTTCTCCGATCCCCACCATTAGCTTCGGCGTTGCCCCTGAAATTTCCGGTTTCTTTTCCGACTCCGATCCGCTCATCGGAACAGAAATATCTCCGGTAAGTCTCATCGGAATCATAATTACACATTCTGCGTACTTCAAAGTGAGAGTCGATCGAACTGCGGATTTCGATTTTTTTTTTTTTTCTGCAAAATTCGATCCTCAGGCTTCTAGAGAATCGGTATTCGTTAGATTGAATTGATAATTAAAGGATTCATTTCTAAAGTACCTGTTGGAGACTGGAATTATTGCTTAGAGAGATCGATTCCGTGACTCTCATGTTTTCTCCTACAATCTTTGCAGTTGGGAAGAATTCGGAGCTCGGATAGAAGTTTAAGGCGTTGGTTATTGAGATTAATAATGGTGAGTTTTCAAGTTTTCGAAAGCTTTAACGTTTTTTCTCGATGTTAATGTAGCATTGGAGGGATTAGAGGAAACTTGTACGTATTTTTGATCGCATTGAGCAATTTTAATGGATTAATTTTATCGAATTTGAAATGGGTATTTTTCTATTCATGGGTTGAATTAGAATTGAACGGGTGGTTTTCTTCTAGGTTCACCATTCTAGCTTTGTCGATGAGGAAGGAATAAGCAAGGCTTGTGGCTGTCCTTTACTTCCTTTGAAAAGTCACATAAAGGGTCCTGCTCCAGTTTCAGATCAAGGTTTAGCTCAACTCTAATTTGTTTATTTTGTTTGTAGAACATACCATCTCTCTATATGTTTCATACTGAAATTTATCTTGTTTGGAAATTCACAGATAAGACTGATATTGTAGATGAAGCGATTACATTCTTTCGCGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGTCCTGCTGATAAGCTTCTTATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGACTTGAAGGTTGCAGAACCTTGGCTGTAGGAACCAAGGCAATAATTAACTTGGGTTTGGAGAATGTTCCCGTGCCCGGAGAGTCGGGCTTTCCCTTTCCTGGACTCTTCCCTATTCCCCAATCTAATGAGGAAGCAGGTGAAGCTTGATCTTAGTTTTCTCTATACCTTCTACTAGCATTTGTTACTAGCATTTCTTAACTAGAAATGCTTACATTTAAAGATGCTCCACTACCCAATGTTGATCAACTTTGTCATTTGCAATTGGCTTTATTTGCTGCATACAGATTAGGCACTCTGTTCCTTTTTCAGCATTTCACACAATTTATATCAGTACAACATTATTTTCCCAGATGAAGATATCTTTTCCAATTCAGTTGATGCGGATATTATGAGTTAATCTTGTGTGCCATTAGCCTCCTGTTTCTTGTCTTAATATTGACAATTTTCATAAGCTTCTAATATGTCCAATTTTATATGCAGAGCTATTCAGGAATTATTTGAAGCAGATAAGAGAAGAGACAAGTGGGAGACTCTTGAGTGTTGCCTATAGAGCCAATGGGACTCCAAATAAATGGTGGTTAGCATTTGCAAAGAGGAAGTTCATGAACATCATCATTCCTTGATCAAATTACTTCCAAGACTGTAGATGTGAAAGTTATGAACATCATCATTCCTCGATCACATGGGCTTTTGTGGTTTCTACTGGAACTTTAGAAGTTAGTTTGTATGAACAGAATCTGAATGTTATATTAGTTTATGATAATGCATGTCAAACTCATCAGAAGCTAGGTCATATTCTTTTTCTTTTTAATAATGATCTTAAATGTAATGTGCTGTCATTTCACAAGTTCTGTACATTAATTACACTAACCATCTTAATCAGAAGGAATAGTTCATGTC GAAAGAGTAAAATGGCAAGAAGAAGACGGTGACGGAATTACCCGAAACGAAGAAACCCCTTTCTCCGATCCCCACCATTAGCTTCGGCGTTGCCCCTGAAATTTCCGGTTTCTTTTCCGACTCCGATCCGCTCATCGGAACAGAAATATCTCCGTTGGGAAGAATTCGGAGCTCGGATAGAAGTTTAAGGCGTTGGTTATTGAGATTAATAATGGTTCACCATTCTAGCTTTGTCGATGAGGAAGGAATAAGCAAGGCTTGTGGCTGTCCTTTACTTCCTTTGAAAAGTCACATAAAGGGTCCTGCTCCAGTTTCAGATCAAGATAAGACTGATATTGTAGATGAAGCGATTACATTCTTTCGCGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGTCCTGCTGATAAGCTTCTTATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGACTTGAAGGTTGCAGAACCTTGGCTGTAGGAACCAAGGCAATAATTAACTTGGGTTTGGAGAATGTTCCCGTGCCCGGAGAGTCGGGCTTTCCCTTTCCTGGACTCTTCCCTATTCCCCAATCTAATGAGGAAGCAGAGCTATTCAGGAATTATTTGAAGCAGATAAGAGAAGAGACAAGTGGGAGACTCTTGAGTGTTGCCTATAGAGCCAATGGGACTCCAAATAAATGGTGGTTAGCATTTGCAAAGAGGAAGTTCATGAACATCATCATTCCTTGATCAAATTACTTCCAAGACTGTAGATGTGAAAGTTATGAACATCATCATTCCTCGATCACATGGGCTTTTGTGGTTTCTACTGGAACTTTAGAAGTTAGTTTGTATGAACAGAATCTGAATGTTATATTAGTTTATGATAATGCATGTCAAACTCATCAGAAGCTAGGTCATATTCTTTTTCTTTTTAATAATGATCTTAAATGTAATGTGCTGTCATTTCACAAGTTCTGTACATTAATTACACTAACCATCTTAATCAGAAGGAATAGTTCATGTC ATGGTTCACCATTCTAGCTTTGTCGATGAGGAAGGAATAAGCAAGGCTTGTGGCTGTCCTTTACTTCCTTTGAAAAGTCACATAAAGGGTCCTGCTCCAGTTTCAGATCAAGATAAGACTGATATTGTAGATGAAGCGATTACATTCTTTCGCGCCAATGTCTTCTTTAGAAATTTTGACATTAAGAGTCCTGCTGATAAGCTTCTTATCTATTTGACATTCTACATCAATGTGGCTTTGAAGAGACTTGAAGGTTGCAGAACCTTGGCTGTAGGAACCAAGGCAATAATTAACTTGGGTTTGGAGAATGTTCCCGTGCCCGGAGAGTCGGGCTTTCCCTTTCCTGGACTCTTCCCTATTCCCCAATCTAATGAGGAAGCAGAGCTATTCAGGAATTATTTGAAGCAGATAAGAGAAGAGACAAGTGGGAGACTCTTGAGTGTTGCCTATAGAGCCAATGGGACTCCAAATAAATGGTGGTTAGCATTTGCAAAGAGGAAGTTCATGAACATCATCATTCCTTGA MVHHSSFVDEEGISKACGCPLLPLKSHIKGPAPVSDQDKTDIVDEAITFFRANVFFRNFDIKSPADKLLIYLTFYINVALKRLEGCRTLAVGTKAIINLGLENVPVPGESGFPFPGLFPIPQSNEEAELFRNYLKQIREETSGRLLSVAYRANGTPNKWWLAFAKRKFMNIIIP
BLAST of ClCG11G003410.1 vs. Swiss-Prot
Match: ARPC3_ARATH (Actin-related protein 2/3 complex subunit 3 OS=Arabidopsis thaliana GN=ARPC3 PE=1 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.0e-90 Identity = 157/173 (90.75%), Postives = 168/173 (97.11%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. Swiss-Prot
Match: ARPC3_MOUSE (Actin-related protein 2/3 complex subunit 3 OS=Mus musculus GN=Arpc3 PE=1 SV=3) HSP 1 Score: 159.5 bits (402), Expect = 3.4e-38 Identity = 81/170 (47.65%), Postives = 112/170 (65.88%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. Swiss-Prot
Match: ARPC3_BOVIN (Actin-related protein 2/3 complex subunit 3 OS=Bos taurus GN=ARPC3 PE=1 SV=3) HSP 1 Score: 159.1 bits (401), Expect = 4.5e-38 Identity = 80/170 (47.06%), Postives = 112/170 (65.88%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. Swiss-Prot
Match: ARPC3_HUMAN (Actin-related protein 2/3 complex subunit 3 OS=Homo sapiens GN=ARPC3 PE=1 SV=3) HSP 1 Score: 159.1 bits (401), Expect = 4.5e-38 Identity = 80/170 (47.06%), Postives = 112/170 (65.88%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. Swiss-Prot
Match: ARPC3_SCHPO (Actin-related protein 2/3 complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=arc3 PE=1 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33 Identity = 74/169 (43.79%), Postives = 101/169 (59.76%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. TrEMBL
Match: A0A0A0LI55_CUCSA (Actin-related protein 2/3 complex subunit 3 OS=Cucumis sativus GN=Csa_2G008100 PE=3 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 4.0e-94 Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. TrEMBL
Match: I1MU29_SOYBN (Actin-related protein 2/3 complex subunit 3 OS=Glycine max GN=GLYMA_17G108800 PE=3 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 7.8e-90 Identity = 162/174 (93.10%), Postives = 171/174 (98.28%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. TrEMBL
Match: G7JGJ3_MEDTR (Actin-related protein 2/3 complex subunit 3 OS=Medicago truncatula GN=MTR_4g115900 PE=3 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 3.9e-89 Identity = 160/172 (93.02%), Postives = 170/172 (98.84%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. TrEMBL
Match: I1LZT5_SOYBN (Actin-related protein 2/3 complex subunit 3 OS=Glycine max GN=GLYMA_13G162500 PE=3 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 6.6e-89 Identity = 161/174 (92.53%), Postives = 170/174 (97.70%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. TrEMBL
Match: D7T4W9_VITVI (Actin-related protein 2/3 complex subunit 3 OS=Vitis vinifera GN=VIT_11s0118g00300 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 4.3e-88 Identity = 161/174 (92.53%), Postives = 166/174 (95.40%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. TAIR10
Match: AT1G60430.1 (AT1G60430.1 actin-related protein C3) HSP 1 Score: 334.0 bits (855), Expect = 5.7e-92 Identity = 157/173 (90.75%), Postives = 168/173 (97.11%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. NCBI nr
Match: gi|659070910|ref|XP_008457213.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis melo]) HSP 1 Score: 356.7 bits (914), Expect = 2.3e-95 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. NCBI nr
Match: gi|778666246|ref|XP_011648714.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Cucumis sativus]) HSP 1 Score: 352.1 bits (902), Expect = 5.7e-94 Identity = 172/174 (98.85%), Postives = 172/174 (98.85%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. NCBI nr
Match: gi|356562945|ref|XP_003549728.1| (PREDICTED: actin-related protein 2/3 complex subunit 3 [Glycine max]) HSP 1 Score: 337.8 bits (865), Expect = 1.1e-89 Identity = 162/174 (93.10%), Postives = 171/174 (98.28%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. NCBI nr
Match: gi|357478341|ref|XP_003609456.1| (actin-related protein 2/3 complex subunit 3 [Medicago truncatula]) HSP 1 Score: 335.5 bits (859), Expect = 5.6e-89 Identity = 160/172 (93.02%), Postives = 170/172 (98.84%), Query Frame = 1
BLAST of ClCG11G003410.1 vs. NCBI nr
Match: gi|356548532|ref|XP_003542655.1| (PREDICTED: actin-related protein 2/3 complex subunit 3-like [Glycine max]) HSP 1 Score: 334.7 bits (857), Expect = 9.5e-89 Identity = 161/174 (92.53%), Postives = 170/174 (97.70%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
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