ClCG11G002260 (gene) Watermelon (Charleston Gray)

Overview
NameClCG11G002260
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionEthylene-responsive transcription factor 12
LocationCG_Chr11 : 2372697 .. 2373455 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACGCCACCGTGCCGGAGACCGACTCCGGTGGCAGCTCCAATTCCTGGTCCTCGTCTTCTTCCTCGACGTCATGTTCGATCTCGTCTCCGTCGAAACAAGTCGGTAGCCGAACGTCGTCGAAGCGCAGTCGAGAGAGTAGCAACAATCGTCACCCAAGTTACCGAGGCGTCCGAATGAGGGCGTGGGGCAAATGGGTGTCGGAAATTCGAGAGCCGAAGAAGAAGAGTCGGATCTGGCTCGGCACCTTCGCCACACCCGACATGGCGGCACGTGCTCACGACGTAGCCGCCCTTACTATCAAAGGCAATTCAGCCATCCTCAATTTCCCTGAACTCGCCGCCTCATTACCCCGCCCCGCCTCCTCGTCCCCTCGGGACGTTCAATCCGCCGCCGCCCTCGCCGCTTCAATGCAACTTCCTGACGTCGTCTCACCTCCTCCACCACCGCCACCCCCACCCTCATCGCCTCCCTTCTCGTCATCGTCCGAGTTGGACGAGTCGACACCGGAGGAATTGAGTGAAATTGTGGTGCTGCCCAGTTTGGGAACGGGGTACGAGGAATCGGCCGAGTCAGTGACCGAGTTTGTGTTTGACGAGTGGCAATGTAGCTATGAGCCGTGGGATCAACAAAATCAAAGCTCAAAAGAAGAAGAAGAAGAAGCTTATGAGTACTTTATAGATCAAATGGCAATGGCGGAAAAAGAGTGTGTGATTCCCACTGCATTATTTCAACCTTTACCTTTCTCGTGGTAA

mRNA sequence

ATGGCCGACGCCACCGTGCCGGAGACCGACTCCGGTGGCAGCTCCAATTCCTGGTCCTCGTCTTCTTCCTCGACGTCATGTTCGATCTCGTCTCCGTCGAAACAAGTCGGTAGCCGAACGTCGTCGAAGCGCAGTCGAGAGAGTAGCAACAATCGTCACCCAAGTTACCGAGGCGTCCGAATGAGGGCGTGGGGCAAATGGGTGTCGGAAATTCGAGAGCCGAAGAAGAAGAGTCGGATCTGGCTCGGCACCTTCGCCACACCCGACATGGCGGCACGTGCTCACGACGTAGCCGCCCTTACTATCAAAGGCAATTCAGCCATCCTCAATTTCCCTGAACTCGCCGCCTCATTACCCCGCCCCGCCTCCTCGTCCCCTCGGGACGTTCAATCCGCCGCCGCCCTCGCCGCTTCAATGCAACTTCCTGACGTCGTCTCACCTCCTCCACCACCGCCACCCCCACCCTCATCGCCTCCCTTCTCGTCATCGTCCGAGTTGGACGAGTCGACACCGGAGGAATTGAGTGAAATTGTGGTGCTGCCCAGTTTGGGAACGGGGTACGAGGAATCGGCCGAGTCAGTGACCGAGTTTGTGTTTGACGAGTGGCAATGTAGCTATGAGCCGTGGGATCAACAAAATCAAAGCTCAAAAGAAGAAGAAGAAGAAGCTTATGAGTACTTTATAGATCAAATGGCAATGGCGGAAAAAGAGTGTGTGATTCCCACTGCATTATTTCAACCTTTACCTTTCTCGTGGTAA

Coding sequence (CDS)

ATGGCCGACGCCACCGTGCCGGAGACCGACTCCGGTGGCAGCTCCAATTCCTGGTCCTCGTCTTCTTCCTCGACGTCATGTTCGATCTCGTCTCCGTCGAAACAAGTCGGTAGCCGAACGTCGTCGAAGCGCAGTCGAGAGAGTAGCAACAATCGTCACCCAAGTTACCGAGGCGTCCGAATGAGGGCGTGGGGCAAATGGGTGTCGGAAATTCGAGAGCCGAAGAAGAAGAGTCGGATCTGGCTCGGCACCTTCGCCACACCCGACATGGCGGCACGTGCTCACGACGTAGCCGCCCTTACTATCAAAGGCAATTCAGCCATCCTCAATTTCCCTGAACTCGCCGCCTCATTACCCCGCCCCGCCTCCTCGTCCCCTCGGGACGTTCAATCCGCCGCCGCCCTCGCCGCTTCAATGCAACTTCCTGACGTCGTCTCACCTCCTCCACCACCGCCACCCCCACCCTCATCGCCTCCCTTCTCGTCATCGTCCGAGTTGGACGAGTCGACACCGGAGGAATTGAGTGAAATTGTGGTGCTGCCCAGTTTGGGAACGGGGTACGAGGAATCGGCCGAGTCAGTGACCGAGTTTGTGTTTGACGAGTGGCAATGTAGCTATGAGCCGTGGGATCAACAAAATCAAAGCTCAAAAGAAGAAGAAGAAGAAGCTTATGAGTACTTTATAGATCAAATGGCAATGGCGGAAAAAGAGTGTGTGATTCCCACTGCATTATTTCAACCTTTACCTTTCTCGTGGTAA

Protein sequence

MADATVPETDSGGSSNSWSSSSSSTSCSISSPSKQVGSRTSSKRSRESSNNRHPSYRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQLPDVVSPPPPPPPPPSSPPFSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQCSYEPWDQQNQSSKEEEEEAYEYFIDQMAMAEKECVIPTALFQPLPFSW
Homology
[Close]
BLAST of ClCG11G002260 vs. Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 8.4e-46
Identity = 111/194 (57.22%), Postives = 125/194 (64.43%), Query Frame = 1 

Query: 34  KQVGSRTSSKRSRESSNNRHPSYRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAAR 93
           +Q   RT++K+   S     P YRGVRMR WGKWVSEIREP+KKSRIWLGTF+TP+MAAR
Sbjct: 25  QQDSHRTNTKKRVRSD----PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAAR 84

Query: 94  AHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQLPD-----VVSPP 153
           AHD AALTIKG SA+LNFPELA  LPRPASSSPRDVQ+AAA+AA+M         VVS P
Sbjct: 85  AHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDP 144

Query: 154 PPPPPPP------------SSPPFSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTE 210
                P             +S   S SSE   ST EELSEIV LPSL T Y+   ES++E
Sbjct: 145 TTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYD---ESLSE 204

[Close]
BLAST of ClCG11G002260 vs. Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.9e-45
Identity = 109/202 (53.96%), Postives = 127/202 (62.87%), Query Frame = 1 

Query: 23  SSTSCSISSPSKQVGSRTSSKRSRESSNNRHPSYRGVRMRAWGKWVSEIREPKKKSRIWL 82
           +S S S+S  SK   S   +KR R+S   +HP YRGVRMR WGKWVSEIREP+KKSRIWL
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSG--KHPVYRGVRMRNWGKWVSEIREPRKKSRIWL 79

Query: 83  GTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQLP 142
           GTF TP+MAARAHDVAAL+IKG +AILNFPELA S PRP S SPRD+Q+AA  AA M+  
Sbjct: 80  GTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPT 139

Query: 143 DVVSPPPPPPPPPSSPPFSSS----SELDESTPEELSEIVVLPSLGTGYE-ESAESVTEF 202
              S         SS     S     +L  +  EEL EIV LPSLG  Y+ +SA    EF
Sbjct: 140 TSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEF 199

Query: 203 VFDEW--QCSY-EPWDQQNQSS 217
           VF +    C Y  PW Q ++ +
Sbjct: 200 VFYDSVDYCLYPPPWGQSSEDN 219

[Close]
BLAST of ClCG11G002260 vs. Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=2)

HSP 1 Score: 180.6 bits (457), Expect = 2.1e-44
Identity = 100/196 (51.02%), Postives = 130/196 (66.33%), Query Frame = 1 

Query: 14  SSNSWSSSSSSTSCSISSPSKQVGSRTSSKRSRESSNN------RHPSYRGVRMRAWGKW 73
           SS+  S ++++TS  +S       +  + KR R+SS+       +HP YRGVRMR+WGKW
Sbjct: 13  SSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKW 72

Query: 74  VSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPR 133
           VSEIR+P+KK+RIWLGTF T DMAARAHDVAALTIKG+SA+LNFPELA+  PRPASSSP 
Sbjct: 73  VSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPH 132

Query: 134 DVQSAAALAASMQLPD-VVSPPPPPPPPPSSPPFSSSSELDESTPEELSEIVVLPSLGTG 193
           D+Q+AAA AA+M + + ++     P  PPSS   SS    +    E L +IV LP++  G
Sbjct: 133 DIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSE--SSYVAAESEDEERLEKIVELPNIEEG 192

Query: 194 -YEESAESVTEFVFDE 202
            Y+ES  S  +  + E
Sbjct: 193 SYDESVTSRADLAYSE 206

[Close]
BLAST of ClCG11G002260 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.4e-40
Identity = 95/183 (51.91%), Postives = 113/183 (61.75%), Query Frame = 1 

Query: 21  SSSSTSCSISSPSKQVGSRTSSKRSRESSNNRHPSYRGVRMRAWGKWVSEIREPKKKSRI 80
           +S ST    +S  +Q       K  ++S   +HP YRGVR R WGKWVSEIREP+KKSRI
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSG--KHPVYRGVRKRNWGKWVSEIREPRKKSRI 62

Query: 81  WLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQ 140
           WLGTF +P+MAARAHDVAAL+IKG SAILNFP+LA S PRP+S SPRD+Q AA  AA M+
Sbjct: 63  WLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHME 122

Query: 141 LPDVVSPPPPPPPPPSSPPFSSSSELDEST--PEELSEIVVLPSLGTGYEESAESVTEFV 200
                S         S    S  S +  S    EEL EIV LPSLG+ Y+   +   EF+
Sbjct: 123 TSQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFI 182

Query: 201 FDE 202
           F +
Sbjct: 183 FSD 183

[Close]
BLAST of ClCG11G002260 vs. Swiss-Prot
Match: ERF39_ARATH (Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF039 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37
Identity = 79/139 (56.83%), Postives = 99/139 (71.22%), Query Frame = 1 

Query: 20  SSSSSTSCSISSPSKQVGSRTSSKRSRESSNNRHPSYRGVRMRAWGKWVSEIREPKKKSR 79
           SSS  +  ++ SP  +   ++S  ++ +   ++ P++RGVRMR WGKWVSEIREP+KKSR
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSR 63

Query: 80  IWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASM 139
           IWLGTF+TP+MAARAHDVAAL IKG SA LNFPELA  LPRPAS+ P+D+Q AAA AA++
Sbjct: 64  IWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV 123

Query: 140 QLPDVVSPPPPPPPPPSSP 159
              D  +P  P     SSP
Sbjct: 124 ---DWKAPESPSSTVTSSP 139

[Close]
BLAST of ClCG11G002260 vs. TrEMBL
Match: A0A0A0LFU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G001000 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 7.9e-75
Identity = 147/163 (90.18%), Postives = 151/163 (92.64%), Query Frame = 1 

Query: 91  AARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQLPDV-VSPPP 150
           +ARAHDVAALTIKGNSAILNFPELAAS PRPASSSPRDVQSAAALAASMQLPDV +SPPP
Sbjct: 26  SARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP 85

Query: 151 PPPPPPSSPPFSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQCSYEPW 210
           PPP PPSSPP SSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQ SY PW
Sbjct: 86  PPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQYSYGPW 145

Query: 211 DQQNQSSKEEEEEAYEYFIDQMAMAEKECVIPTALFQPLPFSW 253
           DQ+  SSK EEEE YEYFIDQ AMAE+ECVIPTALFQPL FSW
Sbjct: 146 DQEKDSSK-EEEEGYEYFIDQTAMAERECVIPTALFQPLSFSW 187

[Close]
BLAST of ClCG11G002260 vs. TrEMBL
Match: A0A0A0LFU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G001000 PE=4 SV=1)

HSP 1 Score: 41.2 bits (95), Expect = 2.2e+00
Identity = 20/26 (76.92%), Postives = 24/26 (92.31%), Query Frame = 1 

Query: 1  MADATVPETDSGGSSNSWSSSSSSTS 27
          MADATVP+ DSGG+++S SSSSSSTS
Sbjct: 1  MADATVPDIDSGGANSSSSSSSSSTS 26


HSP 2 Score: 233.0 bits (593), Expect = 3.9e-58
Identity = 143/256 (55.86%), Postives = 167/256 (65.23%), Query Frame = 1 

Query: 19  SSSSSSTSCSISSPSKQVGSRTSS-------KRSRESSNN------RHPSYRGVRMRAWG 78
           +++SSS+S   ++P K  G   S        KR R++SNN       HP YRGVRMR WG
Sbjct: 15  TANSSSSSSPKTAPYKDAGKSRSPDPDQKRVKRPRDNSNNGSSINSEHPVYRGVRMRTWG 74

Query: 79  KWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSS 138
           +WVSEIREP+KK+RIWLGTF+TP+MAARAHDVAALTIKG SAILNFPELA SLPRP S+S
Sbjct: 75  RWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALTIKGASAILNFPELAGSLPRPDSTS 134

Query: 139 PRDVQSAAALAASMQLPDVVSPPPPPPPPPSSPPFSSSSELD-------ESTPEELSEIV 198
           PRDVQ+AAA AASM LP  V  P P P  PSS   SSSS           S+PEELSEIV
Sbjct: 135 PRDVQAAAAKAASMDLPLPVPVPIPSPTTPSSSSSSSSSMAATSSSYDVSSSPEELSEIV 194

Query: 199 VLPSLGTGYEESAESVTEFVF-DEWQCSYEPWDQQNQSSKEEEEEAYEYFIDQ-MAMAEK 253
            LPSLGT Y ES ES +EFVF D   C    W     +   E  E Y Y I   M ++E 
Sbjct: 195 KLPSLGTSY-ESPESGSEFVFVDSVDCG--TWLYPPPAWYNEGFEDYYYQIQMAMPLSEP 254

[Close]
BLAST of ClCG11G002260 vs. TrEMBL
Match: M5W330_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010130mg PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.8e-56
Identity = 150/269 (55.76%), Postives = 171/269 (63.57%), Query Frame = 1 

Query: 1   MADATVPETDSG---GSSNSWSSSSSSTSCSISSPSKQVGSRTSS-------KRSRESSN 60
           MAD T  ET+S     SS S SSS  S S   S+ +   GS  S        KR+RE+S+
Sbjct: 1   MADPTNSETESSFNSPSSPSPSSSGFSQSLPNSAQNPLPGSSDSPDPDQKRVKRARETSS 60

Query: 61  NRHPSYRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILN 120
            +HP YRGVRMR WGKWVSEIREP+KK+RIWLGTF+TP+MAARAHDVAAL IKGNSAILN
Sbjct: 61  -KHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALCIKGNSAILN 120

Query: 121 FPELAASLPRPASSSPRDVQSAAALAASMQLPDVVSPPPPPPPPPSSPPFS-SSSELDES 180
           FP LA SLPRP S+SPRD+Q+AAA AASM   ++    PPPP   SSP  S S++  D  
Sbjct: 121 FPGLAGSLPRPESNSPRDIQTAAAKAASM---EITLNAPPPPSQSSSPALSHSTTSGDAG 180

Query: 181 TPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQCSYEPW---DQQNQSSKEEEEEAYEY 240
           TPEELSEIV LPSLGT Y ESAES  EFVF +   S E W        +S  EEE  Y  
Sbjct: 181 TPEELSEIVELPSLGTSY-ESAESGNEFVFVD---SVEGWLYPPPWWHNSYFEEEYGYNS 240

Query: 241 FI-----DQMAMAE----KECVIPTALFQ 247
            I     DQM M E     EC     L+Q
Sbjct: 241 IINNIRDDQMLMPEPPAAAECFADALLWQ 261

[Close]
BLAST of ClCG11G002260 vs. TrEMBL
Match: A0A061GUB9_THECC (Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_037811 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.8e-55
Identity = 146/267 (54.68%), Postives = 173/267 (64.79%), Query Frame = 1 

Query: 1   MADATVPETDSGGSSNSWSSSSSSTSCSISSPSKQVGSRTSS----------KRSRESSN 60
           M D+   ET+S   SN+      S++ S+ SPS  VG + S+          KR R+SS 
Sbjct: 1   MGDSPNSETESSTLSNN------SSTLSLPSPSSYVGKKKSADDPTPDPKRQKRPRDSS- 60

Query: 61  NRHPSYRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILN 120
            +HP YRGVRMR WGKWVSEIREP+KK+RIWLGTF+TP+MAARAHDVAAL+IKGNSAILN
Sbjct: 61  -KHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALSIKGNSAILN 120

Query: 121 FPELAASLPRPASSSPRDVQSAAALAASMQLPDVVS--PPPPPPPPPSSPPFSSSSELDE 180
           FPELA SLPRPAS+SPRDVQ+AAA AASM+     S           SS   S+SS +D+
Sbjct: 121 FPELAGSLPRPASNSPRDVQAAAAKAASMEFSSSNSNHTTTTSSSSSSSASTSTSSNVDD 180

Query: 181 -STPEELSEIVVLPSLGTGYEESAESVTEFVF----DEW--QCSYEPWDQQNQSSKEEEE 240
            STPEELSEIV LPSLGT Y ESAES +EFV+    D W    S  PW           E
Sbjct: 181 VSTPEELSEIVELPSLGTSY-ESAESGSEFVYVDPDDGWLLNPSGVPW---------YYE 240

Query: 241 EAYEYFIDQMAMAEKECVIPTALFQPL 249
           E   YF D+++M  +E VI T  F PL
Sbjct: 241 ENCGYFGDEISMQMQESVITTG-FGPL 248

[Close]
BLAST of ClCG11G002260 vs. TrEMBL
Match: A0A0A0LWW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G364460 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.4e-55
Identity = 133/235 (56.60%), Postives = 160/235 (68.09%), Query Frame = 1 

Query: 16  NSWSSSSSSTSCSISSPSKQVG----SRTSSKRSRESSNN----RHPSYRGVRMRAWGKW 75
           NS    S S+S S+S PS        +R   KR RE++NN    +HP +RGVRMRAWGKW
Sbjct: 9   NSSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGVRMRAWGKW 68

Query: 76  VSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPR 135
           VSEIREP+KKSRIWLGTF+TP+MAARAHDVAALTIKG SAILNFPELA   PRPAS+SPR
Sbjct: 69  VSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPR 128

Query: 136 DVQSAAALAASMQLPDVVSPPPPPPPPPSSPPFSSSSELDESTPEELSEIVVLPSLGTGY 195
           DVQ+AAA AASM++P             SS   SSS+ L  S+PEEL+EIV LPSLGT Y
Sbjct: 129 DVQAAAAKAASMEIPTPPLSSSSSTSTSSSSSSSSSASLCPSSPEELTEIVELPSLGTSY 188

Query: 196 EESAESVTEFVF----DEWQCSYEPWDQQNQSSKEEEEEAYEY---FIDQMAMAE 236
            E+AE   EFVF    + W  SY PW  +  ++++ EE   +Y   F DQ+ MA+
Sbjct: 189 -ETAELGNEFVFVDSVEGWLYSY-PWYNRVSNAEQVEELQEDYGLFFKDQILMAD 241

[Close]
BLAST of ClCG11G002260 vs. TAIR10
Match: AT1G77200.1 (AT1G77200.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 185.3 bits (469), Expect = 4.7e-47
Identity = 111/194 (57.22%), Postives = 125/194 (64.43%), Query Frame = 1 

Query: 34  KQVGSRTSSKRSRESSNNRHPSYRGVRMRAWGKWVSEIREPKKKSRIWLGTFATPDMAAR 93
           +Q   RT++K+   S     P YRGVRMR WGKWVSEIREP+KKSRIWLGTF+TP+MAAR
Sbjct: 25  QQDSHRTNTKKRVRSD----PGYRGVRMRTWGKWVSEIREPRKKSRIWLGTFSTPEMAAR 84

Query: 94  AHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQLPD-----VVSPP 153
           AHD AALTIKG SA+LNFPELA  LPRPASSSPRDVQ+AAA+AA+M         VVS P
Sbjct: 85  AHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSSSSLVVSDP 144

Query: 154 PPPPPPP------------SSPPFSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTE 210
                P             +S   S SSE   ST EELSEIV LPSL T Y+   ES++E
Sbjct: 145 TTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYD---ESLSE 204

[Close]
BLAST of ClCG11G002260 vs. TAIR10
Match: AT5G11590.1 (AT5G11590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-46
Identity = 109/202 (53.96%), Postives = 127/202 (62.87%), Query Frame = 1 

Query: 23  SSTSCSISSPSKQVGSRTSSKRSRESSNNRHPSYRGVRMRAWGKWVSEIREPKKKSRIWL 82
           +S S S+S  SK   S   +KR R+S   +HP YRGVRMR WGKWVSEIREP+KKSRIWL
Sbjct: 20  NSESDSVSDKSKAEQSEKKTKRGRDSG--KHPVYRGVRMRNWGKWVSEIREPRKKSRIWL 79

Query: 83  GTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQLP 142
           GTF TP+MAARAHDVAAL+IKG +AILNFPELA S PRP S SPRD+Q+AA  AA M+  
Sbjct: 80  GTFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPT 139

Query: 143 DVVSPPPPPPPPPSSPPFSSS----SELDESTPEELSEIVVLPSLGTGYE-ESAESVTEF 202
              S         SS     S     +L  +  EEL EIV LPSLG  Y+ +SA    EF
Sbjct: 140 TSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEF 199

Query: 203 VFDEW--QCSY-EPWDQQNQSS 217
           VF +    C Y  PW Q ++ +
Sbjct: 200 VFYDSVDYCLYPPPWGQSSEDN 219

[Close]
BLAST of ClCG11G002260 vs. TAIR10
Match: AT3G16280.1 (AT3G16280.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45
Identity = 100/196 (51.02%), Postives = 130/196 (66.33%), Query Frame = 1 

Query: 14  SSNSWSSSSSSTSCSISSPSKQVGSRTSSKRSRESSNN------RHPSYRGVRMRAWGKW 73
           SS+  S ++++TS  +S       +  + KR R+SS+       +HP YRGVRMR+WGKW
Sbjct: 13  SSSDQSDATTTTSTHLSEEEAPPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKW 72

Query: 74  VSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPR 133
           VSEIR+P+KK+RIWLGTF T DMAARAHDVAALTIKG+SA+LNFPELA+  PRPASSSP 
Sbjct: 73  VSEIRQPRKKTRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPH 132

Query: 134 DVQSAAALAASMQLPD-VVSPPPPPPPPPSSPPFSSSSELDESTPEELSEIVVLPSLGTG 193
           D+Q+AAA AA+M + + ++     P  PPSS   SS    +    E L +IV LP++  G
Sbjct: 133 DIQTAAAEAAAMVVEEKLLEKDEAPEAPPSSE--SSYVAAESEDEERLEKIVELPNIEEG 192

Query: 194 -YEESAESVTEFVFDE 202
            Y+ES  S  +  + E
Sbjct: 193 SYDESVTSRADLAYSE 206

[Close]
BLAST of ClCG11G002260 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 167.9 bits (424), Expect = 7.8e-42
Identity = 95/183 (51.91%), Postives = 113/183 (61.75%), Query Frame = 1 

Query: 21  SSSSTSCSISSPSKQVGSRTSSKRSRESSNNRHPSYRGVRMRAWGKWVSEIREPKKKSRI 80
           +S ST    +S  +Q       K  ++S   +HP YRGVR R WGKWVSEIREP+KKSRI
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSG--KHPVYRGVRKRNWGKWVSEIREPRKKSRI 62

Query: 81  WLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQ 140
           WLGTF +P+MAARAHDVAAL+IKG SAILNFP+LA S PRP+S SPRD+Q AA  AA M+
Sbjct: 63  WLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHME 122

Query: 141 LPDVVSPPPPPPPPPSSPPFSSSSELDEST--PEELSEIVVLPSLGTGYEESAESVTEFV 200
                S         S    S  S +  S    EEL EIV LPSLG+ Y+   +   EF+
Sbjct: 123 TSQSFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFI 182

Query: 201 FDE 202
           F +
Sbjct: 183 FSD 183

[Close]
BLAST of ClCG11G002260 vs. TAIR10
Match: AT4G16750.1 (AT4G16750.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38
Identity = 79/139 (56.83%), Postives = 99/139 (71.22%), Query Frame = 1 

Query: 20  SSSSSTSCSISSPSKQVGSRTSSKRSRESSNNRHPSYRGVRMRAWGKWVSEIREPKKKSR 79
           SSS  +  ++ SP  +   ++S  ++ +   ++ P++RGVRMR WGKWVSEIREP+KKSR
Sbjct: 4   SSSHESQRNLRSPVPEKTGKSSKTKNEQKGVSKQPNFRGVRMRQWGKWVSEIREPRKKSR 63

Query: 80  IWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASM 139
           IWLGTF+TP+MAARAHDVAAL IKG SA LNFPELA  LPRPAS+ P+D+Q AAA AA++
Sbjct: 64  IWLGTFSTPEMAARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQEAAAAAAAV 123

Query: 140 QLPDVVSPPPPPPPPPSSP 159
              D  +P  P     SSP
Sbjct: 124 ---DWKAPESPSSTVTSSP 139

[Close]
BLAST of ClCG11G002260 vs. NCBI nr
Match: gi|449443341|ref|XP_004139438.1| (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus])

HSP 1 Score: 427.2 bits (1097), Expect = 2.0e-116
Identity = 223/254 (87.80%), Postives = 230/254 (90.55%), Query Frame = 1 

Query: 1   MADATVPETDSGGSSNSWSSSSSSTSCSISSPSKQVGSRTSSKRSRESSNNR-HPSYRGV 60
           MADATVP+ DSGG+++S SSSSSSTS SISSPSKQ   R   KR RESSNN  HPSYRGV
Sbjct: 1   MADATVPDIDSGGANSSSSSSSSSTSGSISSPSKQAIGR-RPKRGRESSNNSPHPSYRGV 60

Query: 61  RMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLP 120
           RMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAAS P
Sbjct: 61  RMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASFP 120

Query: 121 RPASSSPRDVQSAAALAASMQLPDV-VSPPPPPPPPPSSPPFSSSSELDESTPEELSEIV 180
           RPASSSPRDVQSAAALAASMQLPDV +SPPPPPP PPSSPP SSSSELDESTPEELSEIV
Sbjct: 121 RPASSSPRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDESTPEELSEIV 180

Query: 181 VLPSLGTGYEESAESVTEFVFDEWQCSYEPWDQQNQSSKEEEEEAYEYFIDQMAMAEKEC 240
           VLPSLGTGYEESAESVTEFVFDEWQ SY PWDQ+  SSK EEEE YEYFIDQ AMAE+EC
Sbjct: 181 VLPSLGTGYEESAESVTEFVFDEWQYSYGPWDQEKDSSK-EEEEGYEYFIDQTAMAEREC 240

Query: 241 VIPTALFQPLPFSW 253
           VIPTALFQPL FSW
Sbjct: 241 VIPTALFQPLSFSW 252

[Close]
BLAST of ClCG11G002260 vs. NCBI nr
Match: gi|659071202|ref|XP_008458661.1| (PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo])

HSP 1 Score: 424.5 bits (1090), Expect = 1.3e-115
Identity = 221/254 (87.01%), Postives = 230/254 (90.55%), Query Frame = 1 

Query: 1   MADATVPETDSGGSSNSWSSSSSSTSCSISSPSKQVGSRTSSKRSRESSNN-RHPSYRGV 60
           MA+ATVP+TDSGG +NS SSSSSSTS SISSPSKQ       KR RESSNN  HPSYRGV
Sbjct: 1   MANATVPDTDSGG-ANSSSSSSSSTSGSISSPSKQAIGDRRPKRGRESSNNSAHPSYRGV 60

Query: 61  RMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLP 120
           RMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAAS P
Sbjct: 61  RMRAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASFP 120

Query: 121 RPASSSPRDVQSAAALAASMQLPDV-VSPPPPPPPPPSSPPFSSSSELDESTPEELSEIV 180
           RPASSSPRDVQSAAALAASMQLPDV +SPPPPPP PPSSPP SSSSELD+STPEELSEIV
Sbjct: 121 RPASSSPRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDQSTPEELSEIV 180

Query: 181 VLPSLGTGYEESAESVTEFVFDEWQCSYEPWDQQNQSSKEEEEEAYEYFIDQMAMAEKEC 240
           VLPSLGTGY+ESAESVTEFVFDEWQ SY PWDQ+ +SSK EEEE YEYFIDQ AMAE+EC
Sbjct: 181 VLPSLGTGYDESAESVTEFVFDEWQYSYGPWDQEKESSK-EEEEGYEYFIDQTAMAEREC 240

Query: 241 VIPTALFQPLPFSW 253
           VIPTALFQPL FSW
Sbjct: 241 VIPTALFQPLSFSW 252

[Close]
BLAST of ClCG11G002260 vs. NCBI nr
Match: gi|700205474|gb|KGN60593.1| (hypothetical protein Csa_2G001000 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 1.1e-74
Identity = 147/163 (90.18%), Postives = 151/163 (92.64%), Query Frame = 1 

Query: 91  AARAHDVAALTIKGNSAILNFPELAASLPRPASSSPRDVQSAAALAASMQLPDV-VSPPP 150
           +ARAHDVAALTIKGNSAILNFPELAAS PRPASSSPRDVQSAAALAASMQLPDV +SPPP
Sbjct: 26  SARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP 85

Query: 151 PPPPPPSSPPFSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQCSYEPW 210
           PPP PPSSPP SSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQ SY PW
Sbjct: 86  PPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQYSYGPW 145

Query: 211 DQQNQSSKEEEEEAYEYFIDQMAMAEKECVIPTALFQPLPFSW 253
           DQ+  SSK EEEE YEYFIDQ AMAE+ECVIPTALFQPL FSW
Sbjct: 146 DQEKDSSK-EEEEGYEYFIDQTAMAERECVIPTALFQPLSFSW 187

[Close]
BLAST of ClCG11G002260 vs. NCBI nr
Match: gi|700205474|gb|KGN60593.1| (hypothetical protein Csa_2G001000 [Cucumis sativus])

HSP 1 Score: 41.2 bits (95), Expect = 3.1e+00
Identity = 20/26 (76.92%), Postives = 24/26 (92.31%), Query Frame = 1 

Query: 1  MADATVPETDSGGSSNSWSSSSSSTS 27
          MADATVP+ DSGG+++S SSSSSSTS
Sbjct: 1  MADATVPDIDSGGANSSSSSSSSSTS 26


HSP 2 Score: 235.7 bits (600), Expect = 8.7e-59
Identity = 138/244 (56.56%), Postives = 162/244 (66.39%), Query Frame = 1 

Query: 2   ADATVPETDSGGSSNSWSSSSSSTSCSISSPSKQVGSRTSSKRSRESSNNRHPSYRGVRM 61
           +D T   T    SS S S  S      +   S   G+R  SKR+RESS+ +HP YRGVRM
Sbjct: 8   SDTTTESTSFNSSSFSSSPCSGRNGDPLPGGSDPSGNRVGSKRARESSS-KHPVYRGVRM 67

Query: 62  RAWGKWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRP 121
           RAWGKWVSEIREP+KK+RIWLGTF+TP+MAARAHDVAALTIKGNSAILNFP L+ SLPRP
Sbjct: 68  RAWGKWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALTIKGNSAILNFPTLSGSLPRP 127

Query: 122 ASSSPRDVQSAAALAASMQLPDVVSPPPPPPPPPSSPPFSSSSE------LDESTPEELS 181
            S+SPRD+Q+AAA AASM+  D   PPPP P PPSS    SSS        D  TPEEL 
Sbjct: 128 DSNSPRDIQAAAAKAASMENLD---PPPPQPQPPSSALSQSSSSSSSLEVTDAGTPEELG 187

Query: 182 EIVVLPSLGTGYEESAESVTEFVFDE----WQCSYEPWDQQNQSSKEEEEEAYEYFIDQM 236
           EIV LP LGT Y ESAES ++FVF++    W   Y P     Q+ +  E+  Y    ++M
Sbjct: 188 EIVELPRLGTSY-ESAESGSDFVFEDSVEGW--LYPPAQPWWQNGEFGEDYGYSRNFNEM 244

[Close]
BLAST of ClCG11G002260 vs. NCBI nr
Match: gi|703094834|ref|XP_010095372.1| (Dehydration-responsive element-binding protein 3 [Morus notabilis])

HSP 1 Score: 233.0 bits (593), Expect = 5.6e-58
Identity = 143/256 (55.86%), Postives = 167/256 (65.23%), Query Frame = 1 

Query: 19  SSSSSSTSCSISSPSKQVGSRTSS-------KRSRESSNN------RHPSYRGVRMRAWG 78
           +++SSS+S   ++P K  G   S        KR R++SNN       HP YRGVRMR WG
Sbjct: 15  TANSSSSSSPKTAPYKDAGKSRSPDPDQKRVKRPRDNSNNGSSINSEHPVYRGVRMRTWG 74

Query: 79  KWVSEIREPKKKSRIWLGTFATPDMAARAHDVAALTIKGNSAILNFPELAASLPRPASSS 138
           +WVSEIREP+KK+RIWLGTF+TP+MAARAHDVAALTIKG SAILNFPELA SLPRP S+S
Sbjct: 75  RWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALTIKGASAILNFPELAGSLPRPDSTS 134

Query: 139 PRDVQSAAALAASMQLPDVVSPPPPPPPPPSSPPFSSSSELD-------ESTPEELSEIV 198
           PRDVQ+AAA AASM LP  V  P P P  PSS   SSSS           S+PEELSEIV
Sbjct: 135 PRDVQAAAAKAASMDLPLPVPVPIPSPTTPSSSSSSSSSMAATSSSYDVSSSPEELSEIV 194

Query: 199 VLPSLGTGYEESAESVTEFVF-DEWQCSYEPWDQQNQSSKEEEEEAYEYFIDQ-MAMAEK 253
            LPSLGT Y ES ES +EFVF D   C    W     +   E  E Y Y I   M ++E 
Sbjct: 195 KLPSLGTSY-ESPESGSEFVFVDSVDCG--TWLYPPPAWYNEGFEDYYYQIQMAMPLSEP 254

The following BLAST results are available for this feature:
BLAST of ClCG11G002260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF37_ARATH8.4e-4657.22Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF03... [more]
DREB3_ARATH1.9e-4553.96Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB... [more]
ERF36_ARATH2.1e-4451.02Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF03... [more]
TINY_ARATH1.4e-4051.91Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE... [more]
ERF39_ARATH1.9e-3756.83Ethylene-responsive transcription factor ERF039 OS=Arabidopsis thaliana GN=ERF03... [more]
BLAST of ClCG11G002260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFU7_CUCSA7.9e-7590.18Uncharacterized protein OS=Cucumis sativus GN=Csa_2G001000 PE=4 SV=1[more]
A0A0A0LFU7_CUCSA2.2e+0076.92Uncharacterized protein OS=Cucumis sativus GN=Csa_2G001000 PE=4 SV=1[more]
M5W330_PRUPE4.8e-5655.76Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010130mg PE=4 SV=1[more]
A0A061GUB9_THECC1.8e-5554.68Integrase-type DNA-binding superfamily protein OS=Theobroma cacao GN=TCM_037811 ... [more]
A0A0A0LWW4_CUCSA2.4e-5556.60Uncharacterized protein OS=Cucumis sativus GN=Csa_1G364460 PE=4 SV=1[more]
BLAST of ClCG11G002260 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G77200.14.7e-4757.22 Integrase-type DNA-binding superfamily protein[more]
AT5G11590.11.1e-4653.96 Integrase-type DNA-binding superfamily protein[more]
AT3G16280.11.2e-4551.02 Integrase-type DNA-binding superfamily protein[more]
AT5G25810.17.8e-4251.91 Integrase-type DNA-binding superfamily protein[more]
AT4G16750.11.1e-3856.83 Integrase-type DNA-binding superfamily protein[more]
BLAST of ClCG11G002260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443341|ref|XP_004139438.1|2.0e-11687.80PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus][more]
gi|659071202|ref|XP_008458661.1|1.3e-11587.01PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo][more]
gi|700205474|gb|KGN60593.1|1.1e-7490.18hypothetical protein Csa_2G001000 [Cucumis sativus][more]
gi|700205474|gb|KGN60593.1|3.1e+0076.92hypothetical protein Csa_2G001000 [Cucumis sativus][more]
gi|703094834|ref|XP_010095372.1|5.6e-5855.86Dehydration-responsive element-binding protein 3 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G002260.1ClCG11G002260.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 56..67
score: 1.1E-9coord: 78..94
score: 1.
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 55..113
score: 6.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 54..104
score: 8.8
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 55..118
score: 3.8
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 55..112
score: 22
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 55..113
score: 2.22
NoneNo IPR availableunknownCoilCoilcoord: 217..237
scor
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 1..234
score: 1.6
NoneNo IPR availablePANTHERPTHR31985:SF16SUBFAMILY NOT NAMEDcoord: 1..234
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG11G002260Csa2G001000Cucumber (Chinese Long) v2cuwcgB096
ClCG11G002260MELO3C004579Melon (DHL92) v3.5.1mewcgB372
ClCG11G002260Cla004120Watermelon (97103) v1wcgwmB112
ClCG11G002260Cla016785Watermelon (97103) v1wcgwmB107
ClCG11G002260Cla97C11G208660Watermelon (97103) v2wcgwmbB065
ClCG11G002260Cla97C06G118820Watermelon (97103) v2wcgwmbB077
ClCG11G002260Bhi06G001700Wax gourdwcgwgoB146
ClCG11G002260Bhi02G001006Wax gourdwcgwgoB189
ClCG11G002260CSPI02G00940Wild cucumber (PI 183967)cpiwcgB102
ClCG11G002260CSPI01G19180Wild cucumber (PI 183967)cpiwcgB009
ClCG11G002260Cucsa.116550Cucumber (Gy14) v1cgywcgB171
ClCG11G002260CmaCh11G006380Cucurbita maxima (Rimu)cmawcgB092
ClCG11G002260CmaCh12G012650Cucurbita maxima (Rimu)cmawcgB147
ClCG11G002260CmaCh05G013580Cucurbita maxima (Rimu)cmawcgB689
ClCG11G002260CmaCh10G006590Cucurbita maxima (Rimu)cmawcgB047
ClCG11G002260CmoCh12G012980Cucurbita moschata (Rifu)cmowcgB134
ClCG11G002260CmoCh11G006490Cucurbita moschata (Rifu)cmowcgB084
ClCG11G002260CmoCh10G006890Cucurbita moschata (Rifu)cmowcgB039
ClCG11G002260Lsi06G008160Bottle gourd (USVL1VR-Ls)lsiwcgB354
ClCG11G002260Lsi11G002400Bottle gourd (USVL1VR-Ls)lsiwcgB078
ClCG11G002260Cp4.1LG07g10240Cucurbita pepo (Zucchini)cpewcgB724
ClCG11G002260CsGy2G000910Cucumber (Gy14) v2cgybwcgB094
ClCG11G002260MELO3C004579.2Melon (DHL92) v3.6.1medwcgB367
ClCG11G002260Carg18590Silver-seed gourdcarwcgB0873
ClCG11G002260Carg10846Silver-seed gourdcarwcgB0553
ClCG11G002260Carg09828Silver-seed gourdcarwcgB0124
ClCG11G002260CsaV3_2G002020Cucumber (Chinese Long) v3cucwcgB112
ClCG11G002260CsaV3_1G030460Cucumber (Chinese Long) v3cucwcgB009
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG11G002260ClCG07G013270Watermelon (Charleston Gray)wcgwcgB077
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG11G002260Silver-seed gourdcarwcgB0037
ClCG11G002260Silver-seed gourdcarwcgB0192
ClCG11G002260Watermelon (97103) v2wcgwmbB081
ClCG11G002260Wax gourdwcgwgoB156
ClCG11G002260Cucurbita moschata (Rifu)cmowcgB133
ClCG11G002260Cucurbita moschata (Rifu)cmowcgB695
ClCG11G002260Melon (DHL92) v3.5.1mewcgB324
ClCG11G002260Watermelon (97103) v1wcgwmB093
ClCG11G002260Cucurbita pepo (Zucchini)cpewcgB097
ClCG11G002260Cucurbita pepo (Zucchini)cpewcgB315
ClCG11G002260Cucurbita pepo (Zucchini)cpewcgB586
ClCG11G002260Cucumber (Gy14) v2cgybwcgB185