Csa2G001000 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G001000
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionEthylene-responsive transcription factor ERF036; contains IPR001471 (AP2/ERF domain)
LocationChr2 : 584624 .. 585382 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACGCCACCGTGCCGGACATCGACTCCGGTGGTGCCAATTCCTCCTCGTCCTCGTCTTCGTCCTCGACGTCAGGTTCAATATCGTCTCCATCAAAACAAGCCATTGGTCGAAGACCGAAGCGCGGTCGAGAAAGCAGCAACAATAGTCCTCACCCAAGTTACCGCGGCGTCCGAATGAGGGCGTGGGGTAAATGGGTGTCCGAAATTCGAGAGCCGAAGAAAAAGAGTCGGATCTGGCTCGGCACCTTCGCTACACCTGACATGGCAGCACGTGCTCACGACGTAGCTGCTCTTACTATCAAAGGCAATTCCGCCATCCTTAATTTCCCTGAACTCGCCGCCTCATTCCCCCGTCCCGCCTCCTCCTCTCCTCGCGACGTTCAATCCGCTGCTGCTCTTGCTGCTTCAATGCAACTTCCTGATGTCATGATCTCACCTCCACCACCTCCGCCATCACCACCCTCATCGCCTCCGTGTTCGTCGTCGTCCGAGTTGGATGAGTCGACACCAGAGGAATTGAGTGAAATTGTTGTATTGCCAAGTTTGGGGACAGGGTACGAGGAATCGGCTGAGTCGGTGACCGAGTTCGTGTTTGATGAGTGGCAATATAGCTATGGGCCATGGGATCAAGAAAAGGATAGCTCAAAAGAAGAAGAAGAAGGTTATGAATACTTTATAGATCAAACGGCAATGGCGGAAAGAGAGTGTGTGATTCCTACTGCATTATTTCAACCTTTATCTTTCTCGTGGTAA

mRNA sequence

ATGGCCGACGCCACCGTGCCGGACATCGACTCCGGTGGTGCCAATTCCTCCTCGTCCTCGTCTTCGTCCTCGACGTCAGCACGTGCTCACGACGTAGCTGCTCTTACTATCAAAGGCAATTCCGCCATCCTTAATTTCCCTGAACTCGCCGCCTCATTCCCCCGTCCCGCCTCCTCCTCTCCTCGCGACGTTCAATCCGCTGCTGCTCTTGCTGCTTCAATGCAACTTCCTGATGTCATGATCTCACCTCCACCACCTCCGCCATCACCACCCTCATCGCCTCCGTGTTCGTCGTCGTCCGAGTTGGATGAGTCGACACCAGAGGAATTGAGTGAAATTGTTGTATTGCCAAGTTTGGGGACAGGGTACGAGGAATCGGCTGAGTCGGTGACCGAGTTCGTGTTTGATGAGTGGCAATATAGCTATGGGCCATGGGATCAAGAAAAGGATAGCTCAAAAGAAGAAGAAGAAGGTTATGAATACTTTATAGATCAAACGGCAATGGCGGAAAGAGAGTGTGTGATTCCTACTGCATTATTTCAACCTTTATCTTTCTCGTGGTAA

Coding sequence (CDS)

ATGGCCGACGCCACCGTGCCGGACATCGACTCCGGTGGTGCCAATTCCTCCTCGTCCTCGTCTTCGTCCTCGACGTCAGCACGTGCTCACGACGTAGCTGCTCTTACTATCAAAGGCAATTCCGCCATCCTTAATTTCCCTGAACTCGCCGCCTCATTCCCCCGTCCCGCCTCCTCCTCTCCTCGCGACGTTCAATCCGCTGCTGCTCTTGCTGCTTCAATGCAACTTCCTGATGTCATGATCTCACCTCCACCACCTCCGCCATCACCACCCTCATCGCCTCCGTGTTCGTCGTCGTCCGAGTTGGATGAGTCGACACCAGAGGAATTGAGTGAAATTGTTGTATTGCCAAGTTTGGGGACAGGGTACGAGGAATCGGCTGAGTCGGTGACCGAGTTCGTGTTTGATGAGTGGCAATATAGCTATGGGCCATGGGATCAAGAAAAGGATAGCTCAAAAGAAGAAGAAGAAGGTTATGAATACTTTATAGATCAAACGGCAATGGCGGAAAGAGAGTGTGTGATTCCTACTGCATTATTTCAACCTTTATCTTTCTCGTGGTAA

Protein sequence

MADATVPDIDSGGANSSSSSSSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQYSYGPWDQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALFQPLSFSW*
Homology
[Close]
BLAST of Csa2G001000 vs. Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.3e-24
Identity = 73/142 (51.41%), Postives = 85/142 (59.86%), Query Frame = 1 

Query: 21  SSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQL---- 80
           S+   +ARAHD AALTIKG SA+LNFPELA   PRPASSSPRDVQ+AAA+AA+M      
Sbjct: 73  STPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSS 132

Query: 81  -------PDVMISPPPPPPSPPSSPPCSS-----SSELDESTPEELSEIVVLPSLGTGYE 140
                  P  +I+P     S  S   C+S     SSE   ST EELSEIV LPSL T Y+
Sbjct: 133 SSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYD 192

Query: 141 ESAESVTEFVFDEWQY-SYGPW 146
              ES++EFV+ +  Y    PW
Sbjct: 193 ---ESLSEFVYVDSAYPPSSPW 211

[Close]
BLAST of Csa2G001000 vs. Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 3.7e-22
Identity = 60/124 (48.39%), Postives = 81/124 (65.32%), Query Frame = 1 

Query: 22  SSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMI 81
           ++  +ARAHDVAALTIKG+SA+LNFPELA+ FPRPASSSP D+Q+AAA AA+M + + ++
Sbjct: 92  TADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLL 151

Query: 82  SPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTG-YEESAESVTEFV----FD 141
                P +PPSS     ++E ++   E L +IV LP++  G Y+ES  S  +      FD
Sbjct: 152 EKDEAPEAPPSSESSYVAAESEDE--ERLEKIVELPNIEEGSYDESVTSRADLAYSEPFD 211

[Close]
BLAST of Csa2G001000 vs. Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.6e-20
Identity = 67/135 (49.63%), Postives = 77/135 (57.04%), Query Frame = 1 

Query: 26  SARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP 85
           +ARAHDVAAL+IKG +AILNFPELA SFPRP S SPRD+Q+AA  AA M+ P    S   
Sbjct: 86  AARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHME-PTTSFSSST 145

Query: 86  PPPSPPSSPPCSSS----SELDESTPEELSEIVVLPSLGTGYE-ESAESVTEFVF-DEWQ 145
              S  SS     S     +L  +  EEL EIV LPSLG  Y+ +SA    EFVF D   
Sbjct: 146 SSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVFYDSVD 205

Query: 146 YSY--GPWDQEKDSS 153
           Y     PW Q  + +
Sbjct: 206 YCLYPPPWGQSSEDN 219

[Close]
BLAST of Csa2G001000 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-19
Identity = 61/124 (49.19%), Postives = 70/124 (56.45%), Query Frame = 1 

Query: 22  SSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMI 81
           S   +ARAHDVAAL+IKG SAILNFP+LA SFPRP+S SPRD+Q AA  AA M+      
Sbjct: 67  SPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFS 126

Query: 82  SPPPPP-PSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVF----D 141
           S       S  SS    S      +  EEL EIV LPSLG+ Y+   +   EF+F    D
Sbjct: 127 SSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSAD 186

[Close]
BLAST of Csa2G001000 vs. Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 57/133 (42.86%), Postives = 69/133 (51.88%), Query Frame = 1 

Query: 22  SSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMI 81
           ++  + RAHDVAA++IKG SAILNFPEL+   PRP S SPRDV++AA  AA M       
Sbjct: 50  TAEMAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAF 109

Query: 82  SPPPPPPSPPSSPPCSSSSE-----------------LDEST-PEELSEIVVLPSLGTGY 137
                     +S   S SSE                 ++EST  ++L EIV LPSLGT  
Sbjct: 110 RSDTETSETTTSNKMSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSL 169

[Close]
BLAST of Csa2G001000 vs. TrEMBL
Match: A0A0A0LFU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G001000 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 6.2e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   MADATVPDIDSGGANSSSSSSSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSS 60
           MADATVPDIDSGGANSSSSSSSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSS
Sbjct: 1   MADATVPDIDSGGANSSSSSSSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSS 60

Query: 61  PRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLG 120
           PRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLG
Sbjct: 61  PRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLG 120

Query: 121 TGYEESAESVTEFVFDEWQYSYGPWDQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALF 180
           TGYEESAESVTEFVFDEWQYSYGPWDQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALF
Sbjct: 121 TGYEESAESVTEFVFDEWQYSYGPWDQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALF 180

Query: 181 QPLSFSW 188
           QPLSFSW
Sbjct: 181 QPLSFSW 187

[Close]
BLAST of Csa2G001000 vs. TrEMBL
Match: W6FG92_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB4E PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-31
Identity = 97/183 (53.01%), Postives = 112/183 (61.20%), Query Frame = 1 

Query: 21  SSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVM 80
           S+   +ARAHDVAALTIKG SAILNFPELA S PRP S+SPRDVQ+AAA AASM LP  +
Sbjct: 95  STPEMAARAHDVAALTIKGASAILNFPELAGSLPRPDSTSPRDVQAAAAKAASMDLPLPV 154

Query: 81  ISPPPPPPSPPSSPPCSS-----SSELD-ESTPEELSEIVVLPSLGTGYEESAESVTEFV 140
             P P P +P SS   SS     SS  D  S+PEELSEIV LPSLGT Y ES ES +EFV
Sbjct: 155 PVPIPSPTTPSSSSSSSSSMAATSSSYDVSSSPEELSEIVKLPSLGTSY-ESPESGSEFV 214

Query: 141 FDE------WQYSYGPWDQEKDSSKEEEEGYEYFIDQTAMA----ERECVIPTALFQPLS 188
           F +      W Y    W           EG+E +  Q  MA    E EC IP+++F+P  
Sbjct: 215 FVDSVDCGTWLYPPPAW---------YNEGFEDYYYQIQMAMPLSEPECAIPSSVFEP-- 265

[Close]
BLAST of Csa2G001000 vs. TrEMBL
Match: A0A0A0LWW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G364460 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.6e-30
Identity = 88/158 (55.70%), Postives = 106/158 (67.09%), Query Frame = 1 

Query: 21  SSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVM 80
           S+   +ARAHDVAALTIKG SAILNFPELA  FPRPAS+SPRDVQ+AAA AASM++P   
Sbjct: 87  STPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPTPP 146

Query: 81  ISPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVF----D 140
           +S      S  SS   SSS+ L  S+PEEL+EIV LPSLGT Y E+AE   EFVF    +
Sbjct: 147 LS-SSSSTSTSSSSSSSSSASLCPSSPEELTEIVELPSLGTSY-ETAELGNEFVFVDSVE 206

Query: 141 EWQYSYGPWDQEKDSSKEEEEGYE----YFIDQTAMAE 171
            W YSY PW     ++++ EE  E    +F DQ  MA+
Sbjct: 207 GWLYSY-PWYNRVSNAEQVEELQEDYGLFFKDQILMAD 241

[Close]
BLAST of Csa2G001000 vs. TrEMBL
Match: M5W330_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010130mg PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-29
Identity = 95/175 (54.29%), Postives = 107/175 (61.14%), Query Frame = 1 

Query: 21  SSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVM 80
           S+   +ARAHDVAAL IKGNSAILNFP LA S PRP S+SPRD+Q+AAA AASM++    
Sbjct: 95  STPEMAARAHDVAALCIKGNSAILNFPGLAGSLPRPESNSPRDIQTAAAKAASMEI---- 154

Query: 81  ISPPPPPPSPPSSPPCS-SSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVF---- 140
               PPPPS  SSP  S S++  D  TPEELSEIV LPSLGT Y ESAES  EFVF    
Sbjct: 155 TLNAPPPPSQSSSPALSHSTTSGDAGTPEELSEIVELPSLGTSY-ESAESGNEFVFVDSV 214

Query: 141 DEWQYSYGPWDQEKDSSKEEEEGYEYFI-----DQTAMAE----RECVIPTALFQ 182
           + W Y   PW    +S  EEE GY   I     DQ  M E     EC     L+Q
Sbjct: 215 EGWLYP-PPW--WHNSYFEEEYGYNSIINNIRDDQMLMPEPPAAAECFADALLWQ 261

[Close]
BLAST of Csa2G001000 vs. TrEMBL
Match: A0A141AX45_GOSHI (C-repeat binding factor 4 OS=Gossypium hirsutum GN=CBF4 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.8e-28
Identity = 93/171 (54.39%), Postives = 110/171 (64.33%), Query Frame = 1 

Query: 21  SSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVM 80
           S+   +ARAHDVAAL+IKGNSAILNFPELA S PRPAS+SPRDVQ+AAA AA+M+     
Sbjct: 82  STPEMAARAHDVAALSIKGNSAILNFPELAESLPRPASNSPRDVQAAAAKAAAMEFLSNK 141

Query: 81  ISPPPPPPSPPSSPPCSSSSELDE--STPEELSEIVVLPSLGTGYEESAESVTEFV---- 140
            +      S  SS   SSSS +D+  STPEELSEIV LPSLGT Y ESAES  EFV    
Sbjct: 142 NNSVDDATS--SSDSTSSSSNVDDMSSTPEELSEIVELPSLGTSY-ESAESGNEFVYVDR 201

Query: 141 FDEWQYSYG--PWDQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALFQPL 184
           FD W ++    PWD         EE   YF D+T+M  ++ +I T  F PL
Sbjct: 202 FDGWLFNPCGIPWDY--------EENCGYFGDETSMQIQDSLI-TNGFSPL 240

[Close]
BLAST of Csa2G001000 vs. TAIR10
Match: AT1G77200.1 (AT1G77200.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 73/142 (51.41%), Postives = 85/142 (59.86%), Query Frame = 1 

Query: 21  SSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQL---- 80
           S+   +ARAHD AALTIKG SA+LNFPELA   PRPASSSPRDVQ+AAA+AA+M      
Sbjct: 73  STPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAMDFSPSS 132

Query: 81  -------PDVMISPPPPPPSPPSSPPCSS-----SSELDESTPEELSEIVVLPSLGTGYE 140
                  P  +I+P     S  S   C+S     SSE   ST EELSEIV LPSL T Y+
Sbjct: 133 SSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPSLETSYD 192

Query: 141 ESAESVTEFVFDEWQY-SYGPW 146
              ES++EFV+ +  Y    PW
Sbjct: 193 ---ESLSEFVYVDSAYPPSSPW 211

[Close]
BLAST of Csa2G001000 vs. TAIR10
Match: AT3G16280.1 (AT3G16280.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.1e-23
Identity = 60/124 (48.39%), Postives = 81/124 (65.32%), Query Frame = 1 

Query: 22  SSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMI 81
           ++  +ARAHDVAALTIKG+SA+LNFPELA+ FPRPASSSP D+Q+AAA AA+M + + ++
Sbjct: 92  TADMAARAHDVAALTIKGSSAVLNFPELASLFPRPASSSPHDIQTAAAEAAAMVVEEKLL 151

Query: 82  SPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTG-YEESAESVTEFV----FD 141
                P +PPSS     ++E ++   E L +IV LP++  G Y+ES  S  +      FD
Sbjct: 152 EKDEAPEAPPSSESSYVAAESEDE--ERLEKIVELPNIEEGSYDESVTSRADLAYSEPFD 211

[Close]
BLAST of Csa2G001000 vs. TAIR10
Match: AT5G11590.1 (AT5G11590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 100.9 bits (250), Expect = 8.8e-22
Identity = 67/135 (49.63%), Postives = 77/135 (57.04%), Query Frame = 1 

Query: 26  SARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP 85
           +ARAHDVAAL+IKG +AILNFPELA SFPRP S SPRD+Q+AA  AA M+ P    S   
Sbjct: 86  AARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHME-PTTSFSSST 145

Query: 86  PPPSPPSSPPCSSS----SELDESTPEELSEIVVLPSLGTGYE-ESAESVTEFVF-DEWQ 145
              S  SS     S     +L  +  EEL EIV LPSLG  Y+ +SA    EFVF D   
Sbjct: 146 SSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVFYDSVD 205

Query: 146 YSY--GPWDQEKDSS 153
           Y     PW Q  + +
Sbjct: 206 YCLYPPPWGQSSEDN 219

[Close]
BLAST of Csa2G001000 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 97.8 bits (242), Expect = 7.4e-21
Identity = 61/124 (49.19%), Postives = 70/124 (56.45%), Query Frame = 1 

Query: 22  SSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMI 81
           S   +ARAHDVAAL+IKG SAILNFP+LA SFPRP+S SPRD+Q AA  AA M+      
Sbjct: 67  SPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQSFS 126

Query: 82  SPPPPP-PSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVF----D 141
           S       S  SS    S      +  EEL EIV LPSLG+ Y+   +   EF+F    D
Sbjct: 127 SSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSAD 186

[Close]
BLAST of Csa2G001000 vs. TAIR10
Match: AT4G32800.1 (AT4G32800.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 84.7 bits (208), Expect = 6.5e-17
Identity = 57/133 (42.86%), Postives = 69/133 (51.88%), Query Frame = 1 

Query: 22  SSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMI 81
           ++  + RAHDVAA++IKG SAILNFPEL+   PRP S SPRDV++AA  AA M       
Sbjct: 50  TAEMAMRAHDVAAMSIKGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAF 109

Query: 82  SPPPPPPSPPSSPPCSSSSE-----------------LDEST-PEELSEIVVLPSLGTGY 137
                     +S   S SSE                 ++EST  ++L EIV LPSLGT  
Sbjct: 110 RSDTETSETTTSNKMSESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSL 169

[Close]
BLAST of Csa2G001000 vs. NCBI nr
Match: gi|700205474|gb|KGN60593.1| (hypothetical protein Csa_2G001000 [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 8.9e-101
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 1 

Query: 1   MADATVPDIDSGGANSSSSSSSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSS 60
           MADATVPDIDSGGANSSSSSSSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSS
Sbjct: 1   MADATVPDIDSGGANSSSSSSSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSS 60

Query: 61  PRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLG 120
           PRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLG
Sbjct: 61  PRDVQSAAALAASMQLPDVMISPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLG 120

Query: 121 TGYEESAESVTEFVFDEWQYSYGPWDQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALF 180
           TGYEESAESVTEFVFDEWQYSYGPWDQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALF
Sbjct: 121 TGYEESAESVTEFVFDEWQYSYGPWDQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALF 180

Query: 181 QPLSFSW 188
           QPLSFSW
Sbjct: 181 QPLSFSW 187

[Close]
BLAST of Csa2G001000 vs. NCBI nr
Match: gi|449443341|ref|XP_004139438.1| (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 9.6e-87
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 1 

Query: 26  SARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP 85
           +ARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP
Sbjct: 91  AARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP 150

Query: 86  PPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQYSYGPW 145
           PPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQYSYGPW
Sbjct: 151 PPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQYSYGPW 210

Query: 146 DQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALFQPLSFSW 188
           DQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALFQPLSFSW
Sbjct: 211 DQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALFQPLSFSW 252

[Close]
BLAST of Csa2G001000 vs. NCBI nr
Match: gi|449443341|ref|XP_004139438.1| (PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus])

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-03
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 1 

Query: 1  MADATVPDIDSGGANSSSSSSSSSTS 27
          MADATVPDIDSGGANSSSSSSSSSTS
Sbjct: 1  MADATVPDIDSGGANSSSSSSSSSTS 26


HSP 2 Score: 324.3 bits (830), Expect = 1.4e-85
Identity = 158/162 (97.53%), Postives = 162/162 (100.00%), Query Frame = 1 

Query: 26  SARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP 85
           +ARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP
Sbjct: 91  AARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVMISPPP 150

Query: 86  PPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVFDEWQYSYGPW 145
           PPPSPPSSPPCSSSSELD+STPEELSEIVVLPSLGTGY+ESAESVTEFVFDEWQYSYGPW
Sbjct: 151 PPPSPPSSPPCSSSSELDQSTPEELSEIVVLPSLGTGYDESAESVTEFVFDEWQYSYGPW 210

Query: 146 DQEKDSSKEEEEGYEYFIDQTAMAERECVIPTALFQPLSFSW 188
           DQEK+SSKEEEEGYEYFIDQTAMAERECVIPTALFQPLSFSW
Sbjct: 211 DQEKESSKEEEEGYEYFIDQTAMAERECVIPTALFQPLSFSW 252

[Close]
BLAST of Csa2G001000 vs. NCBI nr
Match: gi|659071202|ref|XP_008458661.1| (PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo])

HSP 1 Score: 43.9 bits (102), Expect = 3.6e-01
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 1 

Query: 1  MADATVPDIDSGGANSSSSSSSSSTSA 28
          MA+ATVPD DSGGANSSSSSSSS++ +
Sbjct: 1  MANATVPDTDSGGANSSSSSSSSTSGS 27


HSP 2 Score: 144.1 bits (362), Expect = 2.6e-31
Identity = 97/183 (53.01%), Postives = 112/183 (61.20%), Query Frame = 1 

Query: 21  SSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVM 80
           S+   +ARAHDVAALTIKG SAILNFPELA S PRP S+SPRDVQ+AAA AASM LP  +
Sbjct: 95  STPEMAARAHDVAALTIKGASAILNFPELAGSLPRPDSTSPRDVQAAAAKAASMDLPLPV 154

Query: 81  ISPPPPPPSPPSSPPCSS-----SSELD-ESTPEELSEIVVLPSLGTGYEESAESVTEFV 140
             P P P +P SS   SS     SS  D  S+PEELSEIV LPSLGT Y ES ES +EFV
Sbjct: 155 PVPIPSPTTPSSSSSSSSSMAATSSSYDVSSSPEELSEIVKLPSLGTSY-ESPESGSEFV 214

Query: 141 FDE------WQYSYGPWDQEKDSSKEEEEGYEYFIDQTAMA----ERECVIPTALFQPLS 188
           F +      W Y    W           EG+E +  Q  MA    E EC IP+++F+P  
Sbjct: 215 FVDSVDCGTWLYPPPAW---------YNEGFEDYYYQIQMAMPLSEPECAIPSSVFEP-- 265

[Close]
BLAST of Csa2G001000 vs. NCBI nr
Match: gi|778660525|ref|XP_004148719.2| (PREDICTED: ethylene-responsive transcription factor TINY-like [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 3.7e-30
Identity = 88/158 (55.70%), Postives = 106/158 (67.09%), Query Frame = 1 

Query: 21  SSSSTSARAHDVAALTIKGNSAILNFPELAASFPRPASSSPRDVQSAAALAASMQLPDVM 80
           S+   +ARAHDVAALTIKG SAILNFPELA  FPRPAS+SPRDVQ+AAA AASM++P   
Sbjct: 87  STPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPTPP 146

Query: 81  ISPPPPPPSPPSSPPCSSSSELDESTPEELSEIVVLPSLGTGYEESAESVTEFVF----D 140
           +S      S  SS   SSS+ L  S+PEEL+EIV LPSLGT Y E+AE   EFVF    +
Sbjct: 147 LS-SSSSTSTSSSSSSSSSASLCPSSPEELTEIVELPSLGTSY-ETAELGNEFVFVDSVE 206

Query: 141 EWQYSYGPWDQEKDSSKEEEEGYE----YFIDQTAMAE 171
            W YSY PW     ++++ EE  E    +F DQ  MA+
Sbjct: 207 GWLYSY-PWYNRVSNAEQVEELQEDYGLFFKDQILMAD 241

The following BLAST results are available for this feature:
BLAST of Csa2G001000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF37_ARATH2.3e-2451.41Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF03... [more]
ERF36_ARATH3.7e-2248.39Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF03... [more]
DREB3_ARATH1.6e-2049.63Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB... [more]
TINY_ARATH1.3e-1949.19Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE... [more]
ERF43_ARATH1.2e-1542.86Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF04... [more]
BLAST of Csa2G001000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFU7_CUCSA6.2e-101100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G001000 PE=4 SV=1[more]
W6FG92_9ROSA1.8e-3153.01Dehydration responsive element binding transcription factor OS=Morus notabilis G... [more]
A0A0A0LWW4_CUCSA2.6e-3055.70Uncharacterized protein OS=Cucumis sativus GN=Csa_1G364460 PE=4 SV=1[more]
M5W330_PRUPE1.7e-2954.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010130mg PE=4 SV=1[more]
A0A141AX45_GOSHI1.8e-2854.39C-repeat binding factor 4 OS=Gossypium hirsutum GN=CBF4 PE=2 SV=1[more]
BLAST of Csa2G001000 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G77200.11.3e-2551.41 Integrase-type DNA-binding superfamily protein[more]
AT3G16280.12.1e-2348.39 Integrase-type DNA-binding superfamily protein[more]
AT5G11590.18.8e-2249.63 Integrase-type DNA-binding superfamily protein[more]
AT5G25810.17.4e-2149.19 Integrase-type DNA-binding superfamily protein[more]
AT4G32800.16.5e-1742.86 Integrase-type DNA-binding superfamily protein[more]
BLAST of Csa2G001000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205474|gb|KGN60593.1|8.9e-101100.00hypothetical protein Csa_2G001000 [Cucumis sativus][more]
gi|449443341|ref|XP_004139438.1|9.6e-8799.38PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus][more]
gi|449443341|ref|XP_004139438.1|1.7e-03100.00PREDICTED: ethylene-responsive transcription factor ERF039 [Cucumis sativus][more]
gi|659071202|ref|XP_008458661.1|3.6e-0177.78PREDICTED: dehydration-responsive element-binding protein 3-like [Cucumis melo][more]
gi|778660525|ref|XP_004148719.2|3.7e-3055.70PREDICTED: ethylene-responsive transcription factor TINY-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU121051cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G001000.1Csa2G001000.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU121051CU121051transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 24..48
score: 1.
NoneNo IPR availablePANTHERPTHR31985FAMILY NOT NAMEDcoord: 27..169
score: 2.1
NoneNo IPR availablePANTHERPTHR31985:SF16SUBFAMILY NOT NAMEDcoord: 27..169
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G001000Cla016785Watermelon (97103) v1cuwmB162
Csa2G001000MELO3C004579Melon (DHL92) v3.5.1cumeB140
Csa2G001000ClCG11G002260Watermelon (Charleston Gray)cuwcgB096
Csa2G001000Lsi11G002400Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G001000MELO3C004579.2Melon (DHL92) v3.6.1cumedB133
Csa2G001000Cla97C11G208660Watermelon (97103) v2cuwmbB103
Csa2G001000Bhi06G001700Wax gourdcuwgoB131
Csa2G001000CSPI02G00940Wild cucumber (PI 183967)cpicuB065
Csa2G001000Cucsa.116550Cucumber (Gy14) v1cgycuB150
Csa2G001000CmaCh05G013580Cucurbita maxima (Rimu)cmacuB791
Csa2G001000CmaCh12G012650Cucurbita maxima (Rimu)cmacuB173
Csa2G001000CmoCh12G012980Cucurbita moschata (Rifu)cmocuB157
Csa2G001000Cp4.1LG11g11260Cucurbita pepo (Zucchini)cpecuB103
Csa2G001000Cp4.1LG07g10240Cucurbita pepo (Zucchini)cpecuB821
Csa2G001000CsGy2G000910Cucumber (Gy14) v2cgybcuB056
Csa2G001000Carg10846Silver-seed gourdcarcuB0598
Csa2G001000Carg18590Silver-seed gourdcarcuB0914
Csa2G001000Carg09828Silver-seed gourdcarcuB0139
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G001000Cucurbita maxima (Rimu)cmacuB075
Csa2G001000Cucurbita maxima (Rimu)cmacuB119
Csa2G001000Cucurbita moschata (Rifu)cmocuB065
Csa2G001000Cucurbita moschata (Rifu)cmocuB105
Csa2G001000Cucurbita moschata (Rifu)cmocuB783
Csa2G001000Melon (DHL92) v3.5.1cumeB129
Csa2G001000Watermelon (Charleston Gray)cuwcgB163
Csa2G001000Watermelon (97103) v1cuwmB119
Csa2G001000Cucurbita pepo (Zucchini)cpecuB370
Csa2G001000Cucurbita pepo (Zucchini)cpecuB662
Csa2G001000Silver-seed gourdcarcuB0042
Csa2G001000Silver-seed gourdcarcuB0217
Csa2G001000Watermelon (97103) v2cuwmbB156
Csa2G001000Wax gourdcuwgoB144