CSPI01G19180 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G19180
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Dehydration responsive element binding transcription factor
Location	Chr1 : 14633655 .. 14634548 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAATGCCCCACTTTTCTTTCTCTCTCTAAAACCAAAACCTTTTCTTTTCTTCCCTCCCACCCTCCCCATTTCCAAAAATGGAGAACGATTCTACAATTTTAAACTCATCTCCGCCGCCATCGCCGTCATCATCTGGCAGTTTATCACCACCATCCTCCTCATCGGCTGTCGTCGAATCGAACCGGAAACGACTCAAACGGCCCAGGGAGAATAACAACAACAACAATAACAGCAAACACCCGGTCTTCCGTGGGGTCCGAATGAGGGCATGGGGAAAATGGGTTTCCGAAATTCGTGAACCACGAAAAAAAAGCCGGATCTGGCTCGGTACTTTCTCCACCCCTGAAATGGCCGCACGTGCCCACGACGTCGCCGCCCTCACCATTAAAGGCACCTCCGCCATTCTCAACTTCCCTGAACTTGCCCACCAATTCCCCCGTCCGGCTTCCACTTCCCCTCGTGACGTTCAGGCCGCCGCCGCTAAAGCCGCCTCCATGGAAATCCCAACTCCCCCACTTTCTTCTTCTTCTTCTACTTCTACTTCTTCTTCCTCCTCTTCCTCTTCTTCTGCCTCTTTATGTCCTTCCTCGCCGGAGGAACTGACTGAAATCGTGGAGCTTCCGAGTTTAGGAACGAGTTATGAAACAGCGGAGTTAGGAAACGAGTTCGTGTTTGTGGACTCGGTGGAAGGTTGGCTTTATTCTTACCCATGGTATAACAGAGTGAGTAATGCAGAGCAAGTAGAGGAATTACAAGAGGATTATGGATTATTCTTCAAAGACCAGATTTTAATGGCGGATTATACCGATACTTTCTTATGGCAAAATTAAACAAAAAGGAAACCCCATTTCCTTCATTGTTACATCGTGTGATTTTTCTCCATAAATTTTGGC

mRNA sequence

ATGGAGAACGATTCTACAATTTTAAACTCATCTCCGCCGCCATCGCCGTCATCATCTGGCAGTTTATCACCACCATCCTCCTCATCGGCTGTCGTCGAATCGAACCGGAAACGACTCAAACGGCCCAGGGAGAATAACAACAACAACAATAACAGCAAACACCCGGTCTTCCGTGGGGTCCGAATGAGGGCATGGGGAAAATGGGTTTCCGAAATTCGTGAACCACGAAAAAAAAGCCGGATCTGGCTCGGTACTTTCTCCACCCCTGAAATGGCCGCACGTGCCCACGACGTCGCCGCCCTCACCATTAAAGGCACCTCCGCCATTCTCAACTTCCCTGAACTTGCCCACCAATTCCCCCGTCCGGCTTCCACTTCCCCTCGTGACGTTCAGGCCGCCGCCGCTAAAGCCGCCTCCATGGAAATCCCAACTCCCCCACTTTCTTCTTCTTCTTCTACTTCTACTTCTTCTTCCTCCTCTTCCTCTTCTTCTGCCTCTTTATGTCCTTCCTCGCCGGAGGAACTGACTGAAATCGTGGAGCTTCCGAGTTTAGGAACGAGTTATGAAACAGCGGAGTTAGGAAACGAGTTCGTGTTTGTGGACTCGGTGGAAGGTTGGCTTTATTCTTACCCATGGTATAACAGAGTGAGTAATGCAGAGCAAGTAGAGGAATTACAAGAGGATTATGGATTATTCTTCAAAGACCAGATTTTAATGGCGGATTATACCGATACTTTCTTATGGCAAAATTAA

Coding sequence (CDS)

ATGGAGAACGATTCTACAATTTTAAACTCATCTCCGCCGCCATCGCCGTCATCATCTGGCAGTTTATCACCACCATCCTCCTCATCGGCTGTCGTCGAATCGAACCGGAAACGACTCAAACGGCCCAGGGAGAATAACAACAACAACAATAACAGCAAACACCCGGTCTTCCGTGGGGTCCGAATGAGGGCATGGGGAAAATGGGTTTCCGAAATTCGTGAACCACGAAAAAAAAGCCGGATCTGGCTCGGTACTTTCTCCACCCCTGAAATGGCCGCACGTGCCCACGACGTCGCCGCCCTCACCATTAAAGGCACCTCCGCCATTCTCAACTTCCCTGAACTTGCCCACCAATTCCCCCGTCCGGCTTCCACTTCCCCTCGTGACGTTCAGGCCGCCGCCGCTAAAGCCGCCTCCATGGAAATCCCAACTCCCCCACTTTCTTCTTCTTCTTCTACTTCTACTTCTTCTTCCTCCTCTTCCTCTTCTTCTGCCTCTTTATGTCCTTCCTCGCCGGAGGAACTGACTGAAATCGTGGAGCTTCCGAGTTTAGGAACGAGTTATGAAACAGCGGAGTTAGGAAACGAGTTCGTGTTTGTGGACTCGGTGGAAGGTTGGCTTTATTCTTACCCATGGTATAACAGAGTGAGTAATGCAGAGCAAGTAGAGGAATTACAAGAGGATTATGGATTATTCTTCAAAGACCAGATTTTAATGGCGGATTATACCGATACTTTCTTATGGCAAAATTAA

Homology

[Close]

BLAST of CSPI01G19180 vs. Swiss-Prot
Match: DREB3_ARATH (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB3 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 3.9e-51
Identity = 125/197 (63.45%), Postives = 141/197 (71.57%), Query Frame = 1


Query: 25  PSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLG 84
           P+S S  V    K  +  ++     ++ KHPV+RGVRMR WGKWVSEIREPRKKSRIWLG
Sbjct: 19  PNSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLG 78

Query: 85  TFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPT 144
           TF TPEMAARAHDVAAL+IKGT+AILNFPELA  FPRP S SPRD+Q AA KAA ME   
Sbjct: 79  TFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHME--- 138

Query: 145 PPLSSSSSTSTSSSSSSSSS-------ASLCPSSPEELTEIVELPSLGTSY--ETAELGN 204
           P  S SSSTS+SSS SS+SS         L  +  EEL EIVELPSLG SY  ++A LGN
Sbjct: 139 PTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGN 198

Query: 205 EFVFVDSVEGWLYSYPW 213
           EFVF DSV+  LY  PW
Sbjct: 199 EFVFYDSVDYCLYPPPW 212

[Close]

BLAST of CSPI01G19180 vs. Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 8.1e-49
Identity = 120/189 (63.49%), Postives = 140/189 (74.07%), Query Frame = 1


Query: 28  SSAVVESNRKRLKRPRENNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFS 87
           +SAV + N +  K+P +++      KHPV+RGVR R WGKWVSEIREPRKKSRIWLGTF 
Sbjct: 12  ASAVRQENEEEKKKPVKDSG-----KHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFP 71

Query: 88  TPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPTPPL 147
           +PEMAARAHDVAAL+IKG SAILNFP+LA  FPRP+S SPRD+Q AA KAA ME  +   
Sbjct: 72  SPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMET-SQSF 131

Query: 148 SSSSSTSTSSSSSSSSSASLCPSSP---EELTEIVELPSLGTSYE-TAELGNEFVFVDSV 207
           SSSSS + SSS SSSS  SL  SS    EEL EIVELPSLG+SY+   +LGNEF+F DS 
Sbjct: 132 SSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSA 191

Query: 208 EGWLYSYPW 213
           + W Y   W
Sbjct: 192 DLWPYPPQW 194

[Close]

BLAST of CSPI01G19180 vs. Swiss-Prot
Match: ERF37_ARATH (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF037 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.6e-42
Identity = 120/215 (55.81%), Postives = 141/215 (65.58%), Query Frame = 1


Query: 17  SSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKH-PVFRGVRMRAWGKWVSEIREP 76
           + S  +S   SS    E +    ++     N     +  P +RGVRMR WGKWVSEIREP
Sbjct: 2   TESSIISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREP 61

Query: 77  RKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAA 136
           RKKSRIWLGTFSTPEMAARAHD AALTIKGTSA+LNFPELA   PRPAS+SPRDVQAAAA
Sbjct: 62  RKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAA 121

Query: 137 KAASMEI-----------PTPPLS------SSSSTSTSSSSSSSSSASLCPSSPEELTEI 196
            AA+M+            PT  ++      SSSS ST +SSS S S+    S+ EEL+EI
Sbjct: 122 VAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEI 181

Query: 197 VELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWY 214
           VELPSL TSY+  E  +EFV+VDS   +  S PWY
Sbjct: 182 VELPSLETSYD--ESLSEFVYVDS--AYPPSSPWY 212

[Close]

BLAST of CSPI01G19180 vs. Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.4e-39
Identity = 103/187 (55.08%), Postives = 121/187 (64.71%), Query Frame = 1


Query: 45  NNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIK 104
           +     N+K PV+RGVRMR+WGKWVSEIREPRKKSRIWLGTF T EMA RAHDVAA++IK
Sbjct: 7   DKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIK 66

Query: 105 GTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTS-------TSS 164
           GTSAILNFPEL+   PRP S SPRDV+AAA KAA M+  T    S + TS        S 
Sbjct: 67  GTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMSE 126

Query: 165 SSSSSSSASLCPSS------------PEELTEIVELPSLGTSYETAELGNEFVFVDSVEG 213
           SS S+ + S   SS             ++L EIV+LPSLGTS   +   NEFV  DS+E 
Sbjct: 127 SSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES---NEFVIFDSLED 186

[Close]

BLAST of CSPI01G19180 vs. Swiss-Prot
Match: ERF42_ARATH (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF042 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-36
Identity = 105/207 (50.72%), Postives = 129/207 (62.32%), Query Frame = 1


Query: 34  SNRKRLKRPRENNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAA 93
           S++K+ ++ +E           V+RG RMR+WGKWVSEIREPRKKSRIWLGTF T EMAA
Sbjct: 12  SSKKKKEKTKEKG---------VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAA 71

Query: 94  RAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPTPPL------ 153
           RAHDVAAL+IKG+SAILNFPELA   PRP S S +D+QAAAA+AA M+  T P       
Sbjct: 72  RAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDS 131

Query: 154 ----------------SSSSSTSTSSSSSSSSSASLCPSSPEELTEIVELPSLGTSYETA 213
                           SSSSS S+SSSSSSSSS+S+      EL +IVELPSL  + +  
Sbjct: 132 TPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSG---ELGDIVELPSLENNVK-- 191

Query: 214 ELGNEFVFVDSVEGWLYSYPWYNRVSN 219
               +    DS+EG +   PW +   N
Sbjct: 192 ---YDCALYDSLEGLVSMPPWLDATEN 201

[Close]

BLAST of CSPI01G19180 vs. TrEMBL
Match: A0A0A0LWW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G364460 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 8.5e-130
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


Query: 1   MENDSTILNSSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGV 60
           MENDSTILNSSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGV
Sbjct: 1   MENDSTILNSSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGV 60

Query: 61  RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP 120
           RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP
Sbjct: 61  RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP 120

Query: 121 RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTSSSSSSSSSASLCPSSPEELTEIVE 180
           RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTSSSSSSSSSASLCPSSPEELTEIVE
Sbjct: 121 RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTSSSSSSSSSASLCPSSPEELTEIVE 180

Query: 181 LPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVEELQEDYGLFFKDQILMA 240
           LPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVEELQEDYGLFFKDQILMA
Sbjct: 181 LPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVEELQEDYGLFFKDQILMA 240

Query: 241 DYTDTFLWQN 251
           DYTDTFLWQN
Sbjct: 241 DYTDTFLWQN 250

[Close]

BLAST of CSPI01G19180 vs. TrEMBL
Match: D5L123_MALDO (AP2 domain class transcription factor OS=Malus domestica GN=AP2D39 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.2e-60
Identity = 162/276 (58.70%), Postives = 188/276 (68.12%), Query Frame = 1


Query: 2   ENDSTILNSSP-PPSPSSSG-SLSPPSSS-------SAVVESNRKRLKRPRENNNNNNNS 61
           EN+S+  +SSP PPSPSSSG S S P+S        S     ++KR KR RE +     S
Sbjct: 8   ENESSSNSSSPSPPSPSSSGFSQSIPNSGLNQLPVRSDSPGPDQKRAKRVRETS-----S 67

Query: 62  KHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNF 121
           KHPV+RGVRMR WGKWVSEIREPRKK+RIWLGTFSTPEMAARAHDVAA+TIKG SAILNF
Sbjct: 68  KHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAAMTIKGNSAILNF 127

Query: 122 PELAHQFPRPASTSPRDVQAAAAKAASMEIPTPPL------SSSSSTSTSSSSSSSS--- 181
           P LA   PRP S SPRD+QAAAAKAASME   PPL      SSSSS++ S SSSSSS   
Sbjct: 128 PGLAGSLPRPDSNSPRDIQAAAAKAASMETLNPPLLPPPSHSSSSSSALSQSSSSSSMVG 187

Query: 182 --SASLCPSSPEELTEIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQ 241
             S S    +PEEL EIV+LPSLGTSYE+AE G+EFVF DSVEGWLY  PW++     E+
Sbjct: 188 TTSTSGDAGTPEELGEIVKLPSLGTSYESAESGSEFVFADSVEGWLYPPPWWHNSYLEEE 247

Query: 242 VEELQEDYGLFFKDQILMAD-------YTDTFLWQN 251
                    +   DQ+LM++         + FLWQ+
Sbjct: 248 NGYNNLINSIIRDDQMLMSEPPAAECVGVEAFLWQH 278

[Close]

BLAST of CSPI01G19180 vs. TrEMBL
Match: W6FG92_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB4E PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.2e-59
Identity = 149/257 (57.98%), Postives = 186/257 (72.37%), Query Frame = 1


Query: 13  PPSPSSSGSLSPPSSS-------SAVVESNRKRLKRPRENNNNNN--NSKHPVFRGVRMR 72
           P S ++S S S P ++       S   + ++KR+KRPR+N+NN +  NS+HPV+RGVRMR
Sbjct: 12  PESTANSSSSSSPKTAPYKDAGKSRSPDPDQKRVKRPRDNSNNGSSINSEHPVYRGVRMR 71

Query: 73  AWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPA 132
            WG+WVSEIREPRKK+RIWLGTFSTPEMAARAHDVAALTIKG SAILNFPELA   PRP 
Sbjct: 72  TWGRWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALTIKGASAILNFPELAGSLPRPD 131

Query: 133 STSPRDVQAAAAKAASMEIPTP-------PLSSSSSTSTSSSSSSSSSASLCPSSPEELT 192
           STSPRDVQAAAAKAASM++P P       P + SSS+S+SSS +++SS+    SSPEEL+
Sbjct: 132 STSPRDVQAAAAKAASMDLPLPVPVPIPSPTTPSSSSSSSSSMAATSSSYDVSSSPEELS 191

Query: 193 EIVELPSLGTSYETAELGNEFVFVDSVE--GWLYSYP-WYNRVSNAEQVEELQEDYGLFF 251
           EIV+LPSLGTSYE+ E G+EFVFVDSV+   WLY  P WYN     +   ++Q    L  
Sbjct: 192 EIVKLPSLGTSYESPESGSEFVFVDSVDCGTWLYPPPAWYNE-GFEDYYYQIQMAMPLSE 251

[Close]

BLAST of CSPI01G19180 vs. TrEMBL
Match: M5W330_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010130mg PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.7e-59
Identity = 151/259 (58.30%), Postives = 177/259 (68.34%), Query Frame = 1


Query: 9   NSSPPPSPSSSG-SLSPPSS-------SSAVVESNRKRLKRPRENNNNNNNSKHPVFRGV 68
           NS   PSPSSSG S S P+S       SS   + ++KR+KR RE +     SKHPV+RGV
Sbjct: 14  NSPSSPSPSSSGFSQSLPNSAQNPLPGSSDSPDPDQKRVKRARETS-----SKHPVYRGV 73

Query: 69  RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP 128
           RMR WGKWVSEIREPRKK+RIWLGTFSTPEMAARAHDVAAL IKG SAILNFP LA   P
Sbjct: 74  RMRTWGKWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALCIKGNSAILNFPGLAGSLP 133

Query: 129 RPASTSPRDVQAAAAKAASMEIPT---PPLSSSSSTSTSSSSSSSSSASLCPSSPEELTE 188
           RP S SPRD+Q AAAKAASMEI     PP S SSS + S S++S  + +     PEEL+E
Sbjct: 134 RPESNSPRDIQTAAAKAASMEITLNAPPPPSQSSSPALSHSTTSGDAGT-----PEELSE 193

Query: 189 IVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQ------VEELQEDYGL 248
           IVELPSLGTSYE+AE GNEFVFVDSVEGWLY  PW++     E+      +  +++D  L
Sbjct: 194 IVELPSLGTSYESAESGNEFVFVDSVEGWLYPPPWWHNSYFEEEYGYNSIINNIRDDQML 253

Query: 249 FFKDQILMADYTDTFLWQN 251
             +       + D  LWQ+
Sbjct: 254 MPEPPAAAECFADALLWQH 262

[Close]

BLAST of CSPI01G19180 vs. TrEMBL
Match: F6HGL9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03350 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.6e-59
Identity = 148/240 (61.67%), Postives = 169/240 (70.42%), Query Frame = 1


Query: 10  SSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGVRMRAWGKWV 69
           S+   SPSSSG  +PP+  S   + +++R KR R++      SKHPV+RGVRMR WGKWV
Sbjct: 13  SNSSSSPSSSGIQNPPAKRSKTSDPDQERPKRGRDS------SKHPVYRGVRMRTWGKWV 72

Query: 70  SEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRD 129
           SEIREPRKKSRIWLGTFSTPEMAARAHDVAAL+IKG SAILNFPELA   PRPAS+SPRD
Sbjct: 73  SEIREPRKKSRIWLGTFSTPEMAARAHDVAALSIKGNSAILNFPELASSLPRPASSSPRD 132

Query: 130 VQAAAAKAASMEIPTPPLSSSSSTSTSSS------------SSSSSSASLCPSS------ 189
           VQAAAAKAASME   P  SSSSS+S+SSS            SSSSSS ++  SS      
Sbjct: 133 VQAAAAKAASMEHLNPSSSSSSSSSSSSSLPSPSPSPSPSPSSSSSSMAITSSSSMSSLI 192

Query: 190 -------PEELTEIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVEE 225
                  PEEL EIVELPSLGTS+ET E GN+FVFVDSV+GWLY  PW +   +     E
Sbjct: 193 STSDASTPEELGEIVELPSLGTSFETPESGNDFVFVDSVDGWLYPPPWLHTADDCGYFSE 246

[Close]

BLAST of CSPI01G19180 vs. TAIR10
Match: AT5G11590.1 (AT5G11590.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 203.0 bits (515), Expect = 2.2e-52
Identity = 125/197 (63.45%), Postives = 141/197 (71.57%), Query Frame = 1


Query: 25  PSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLG 84
           P+S S  V    K  +  ++     ++ KHPV+RGVRMR WGKWVSEIREPRKKSRIWLG
Sbjct: 19  PNSESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLG 78

Query: 85  TFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPT 144
           TF TPEMAARAHDVAAL+IKGT+AILNFPELA  FPRP S SPRD+Q AA KAA ME   
Sbjct: 79  TFPTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHME--- 138

Query: 145 PPLSSSSSTSTSSSSSSSSS-------ASLCPSSPEELTEIVELPSLGTSY--ETAELGN 204
           P  S SSSTS+SSS SS+SS         L  +  EEL EIVELPSLG SY  ++A LGN
Sbjct: 139 PTTSFSSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGN 198

Query: 205 EFVFVDSVEGWLYSYPW 213
           EFVF DSV+  LY  PW
Sbjct: 199 EFVFYDSVDYCLYPPPW 212

[Close]

BLAST of CSPI01G19180 vs. TAIR10
Match: AT5G25810.1 (AT5G25810.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 195.3 bits (495), Expect = 4.6e-50
Identity = 120/189 (63.49%), Postives = 140/189 (74.07%), Query Frame = 1


Query: 28  SSAVVESNRKRLKRPRENNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFS 87
           +SAV + N +  K+P +++      KHPV+RGVR R WGKWVSEIREPRKKSRIWLGTF 
Sbjct: 12  ASAVRQENEEEKKKPVKDSG-----KHPVYRGVRKRNWGKWVSEIREPRKKSRIWLGTFP 71

Query: 88  TPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPTPPL 147
           +PEMAARAHDVAAL+IKG SAILNFP+LA  FPRP+S SPRD+Q AA KAA ME  +   
Sbjct: 72  SPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMET-SQSF 131

Query: 148 SSSSSTSTSSSSSSSSSASLCPSSP---EELTEIVELPSLGTSYE-TAELGNEFVFVDSV 207
           SSSSS + SSS SSSS  SL  SS    EEL EIVELPSLG+SY+   +LGNEF+F DS 
Sbjct: 132 SSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSDSA 191

Query: 208 EGWLYSYPW 213
           + W Y   W
Sbjct: 192 DLWPYPPQW 194

[Close]

BLAST of CSPI01G19180 vs. TAIR10
Match: AT1G77200.1 (AT1G77200.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 5.4e-43
Identity = 120/215 (55.81%), Postives = 141/215 (65.58%), Query Frame = 1


Query: 17  SSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKH-PVFRGVRMRAWGKWVSEIREP 76
           + S  +S   SS    E +    ++     N     +  P +RGVRMR WGKWVSEIREP
Sbjct: 2   TESSIISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREP 61

Query: 77  RKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAA 136
           RKKSRIWLGTFSTPEMAARAHD AALTIKGTSA+LNFPELA   PRPAS+SPRDVQAAAA
Sbjct: 62  RKKSRIWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAA 121

Query: 137 KAASMEI-----------PTPPLS------SSSSTSTSSSSSSSSSASLCPSSPEELTEI 196
            AA+M+            PT  ++      SSSS ST +SSS S S+    S+ EEL+EI
Sbjct: 122 VAAAMDFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEI 181

Query: 197 VELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWY 214
           VELPSL TSY+  E  +EFV+VDS   +  S PWY
Sbjct: 182 VELPSLETSYD--ESLSEFVYVDS--AYPPSSPWY 212

[Close]

BLAST of CSPI01G19180 vs. TAIR10
Match: AT4G32800.1 (AT4G32800.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-40
Identity = 103/187 (55.08%), Postives = 121/187 (64.71%), Query Frame = 1


Query: 45  NNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIK 104
           +     N+K PV+RGVRMR+WGKWVSEIREPRKKSRIWLGTF T EMA RAHDVAA++IK
Sbjct: 7   DKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSIK 66

Query: 105 GTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTS-------TSS 164
           GTSAILNFPEL+   PRP S SPRDV+AAA KAA M+  T    S + TS        S 
Sbjct: 67  GTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMSE 126

Query: 165 SSSSSSSASLCPSS------------PEELTEIVELPSLGTSYETAELGNEFVFVDSVEG 213
           SS S+ + S   SS             ++L EIV+LPSLGTS   +   NEFV  DS+E 
Sbjct: 127 SSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNES---NEFVIFDSLED 186

[Close]

BLAST of CSPI01G19180 vs. TAIR10
Match: AT2G25820.1 (AT2G25820.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 154.5 bits (389), Expect = 8.9e-38
Identity = 105/207 (50.72%), Postives = 129/207 (62.32%), Query Frame = 1


Query: 34  SNRKRLKRPRENNNNNNNSKHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAA 93
           S++K+ ++ +E           V+RG RMR+WGKWVSEIREPRKKSRIWLGTF T EMAA
Sbjct: 12  SSKKKKEKTKEKG---------VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAA 71

Query: 94  RAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAAAAKAASMEIPTPPL------ 153
           RAHDVAAL+IKG+SAILNFPELA   PRP S S +D+QAAAA+AA M+  T P       
Sbjct: 72  RAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDS 131

Query: 154 ----------------SSSSSTSTSSSSSSSSSASLCPSSPEELTEIVELPSLGTSYETA 213
                           SSSSS S+SSSSSSSSS+S+      EL +IVELPSL  + +  
Sbjct: 132 TPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSG---ELGDIVELPSLENNVK-- 191

Query: 214 ELGNEFVFVDSVEGWLYSYPWYNRVSN 219
               +    DS+EG +   PW +   N
Sbjct: 192 ---YDCALYDSLEGLVSMPPWLDATEN 201

[Close]

BLAST of CSPI01G19180 vs. NCBI nr
Match: gi|778660525|ref|XP_004148719.2| (PREDICTED: ethylene-responsive transcription factor TINY-like [Cucumis sativus])

HSP 1 Score: 471.1 bits (1211), Expect = 1.2e-129
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


Query: 1   MENDSTILNSSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGV 60
           MENDSTILNSSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGV
Sbjct: 1   MENDSTILNSSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGV 60

Query: 61  RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP 120
           RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP
Sbjct: 61  RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP 120

Query: 121 RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTSSSSSSSSSASLCPSSPEELTEIVE 180
           RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTSSSSSSSSSASLCPSSPEELTEIVE
Sbjct: 121 RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTSSSSSSSSSASLCPSSPEELTEIVE 180

Query: 181 LPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVEELQEDYGLFFKDQILMA 240
           LPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVEELQEDYGLFFKDQILMA
Sbjct: 181 LPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVEELQEDYGLFFKDQILMA 240

Query: 241 DYTDTFLWQN 251
           DYTDTFLWQN
Sbjct: 241 DYTDTFLWQN 250

[Close]

BLAST of CSPI01G19180 vs. NCBI nr
Match: gi|659125585|ref|XP_008462760.1| (PREDICTED: ethylene-responsive transcription factor TINY-like [Cucumis melo])

HSP 1 Score: 448.0 bits (1151), Expect = 1.1e-122
Identity = 242/253 (95.65%), Postives = 246/253 (97.23%), Query Frame = 1


Query: 1   MENDSTILNSSPPPSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGV 60
           MENDSTILNSSPPPSPSSSGSLSPPSSSS VVESNRKRLKRPRE   NNNNSKHPVFRGV
Sbjct: 1   MENDSTILNSSPPPSPSSSGSLSPPSSSSPVVESNRKRLKRPRE---NNNNSKHPVFRGV 60

Query: 61  RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP 120
           RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP
Sbjct: 61  RMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFP 120

Query: 121 RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTS---SSSSSSSSASLCPSSPEELTE 180
           RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTS   +SSSSSSS+SLCPSSPEELTE
Sbjct: 121 RPASTSPRDVQAAAAKAASMEIPTPPLSSSSSTSTSTSTTSSSSSSSSSLCPSSPEELTE 180

Query: 181 IVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVEELQEDYGLFFKDQI 240
           IVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQV+E+QEDYGLFFKDQI
Sbjct: 181 IVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQVKEVQEDYGLFFKDQI 240

Query: 241 LMADYTDTFLWQN 251
           LMADYTDTFLWQN
Sbjct: 241 LMADYTDTFLWQN 250

[Close]

BLAST of CSPI01G19180 vs. NCBI nr
Match: gi|1012083915|ref|XP_015954208.1| (PREDICTED: ethylene-responsive transcription factor TINY-like [Arachis duranensis])

HSP 1 Score: 247.3 bits (630), Expect = 2.9e-62
Identity = 148/227 (65.20%), Postives = 178/227 (78.41%), Query Frame = 1


Query: 14  PSPSSSGSLSPPSSSSAVVESNRKRLKRPRENNNNNNNSKHPVFRGVRMRAWGKWVSEIR 73
           PSP+S  S S  SS S   E  +   KR RE +NN NN+KHPV+RGVRMRAWGKWVSEIR
Sbjct: 6   PSPNSCYSSS--SSVSLDPEKQKSAGKRGRERSNNKNNNKHPVYRGVRMRAWGKWVSEIR 65

Query: 74  EPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNFPELAHQFPRPASTSPRDVQAA 133
           EPRKK+RIWLGTF+TP+MAARAHDVAAL IKG+SAILNFP+LA Q PRP S  PRDVQ A
Sbjct: 66  EPRKKNRIWLGTFATPDMAARAHDVAALAIKGSSAILNFPQLAPQLPRPHSNCPRDVQVA 125

Query: 134 AAKAASMEIPTPPLSSSSSTSTSSSSSSSSSASLCPSSPEELTEIVELPSLGTSYETAEL 193
           AAKAASM+  +P  SSSSS+S+SSS SSS S+S  PS+PEEL EIVELP+LGTS+E+AE 
Sbjct: 126 AAKAASMDFLSP--SSSSSSSSSSSPSSSISSSEEPSTPEELGEIVELPALGTSFESAEA 185

Query: 194 GNEFVFVDSVEGWLYSYPWYNRVSNAEQVEELQEDYGLFFK-DQILM 240
             E VF++ V+GWLY +PW+   S+  + EE++ED G++F  DQI M
Sbjct: 186 NKEMVFLEPVDGWLYPHPWWYHSSSIYE-EEVREDCGVYFTGDQISM 227

[Close]

BLAST of CSPI01G19180 vs. NCBI nr
Match: gi|694322854|ref|XP_009352529.1| (PREDICTED: ethylene-responsive transcription factor TINY [Pyrus x bretschneideri])

HSP 1 Score: 240.4 bits (612), Expect = 3.5e-60
Identity = 165/282 (58.51%), Postives = 191/282 (67.73%), Query Frame = 1


Query: 2   ENDSTILNSSPPP-SPSSSG-SLSPPSSS-------SAVVESNRKRLKRPRENNNNNNNS 61
           EN+S+  +SSP P SPSSSG S S P+S        S     ++KR KR RE +     S
Sbjct: 8   ENESSFNSSSPSPTSPSSSGFSQSIPNSGLNQLPVRSDSPGPDQKRAKRARETS-----S 67

Query: 62  KHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNF 121
           KHPV+RGVRMR WGKWVSEIREPRKK+RIWLGTFSTPEMAARAHDVAALTIKG SAILNF
Sbjct: 68  KHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALTIKGNSAILNF 127

Query: 122 PELAHQFPRPASTSPRDVQAAAAKAASME------IPTPPLSSSSSTSTSSSSSSSS--- 181
           P LA   PRP S SPRD+QAAAAKAASME      +P P  SSSSS++ S SSSSSS   
Sbjct: 128 PGLAGSLPRPDSNSPRDIQAAAAKAASMETLNPPPLPPPLHSSSSSSALSQSSSSSSMVG 187

Query: 182 -SASLCPSSPEELTEIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQV 241
            S S    +PEEL EIVELPSLGTSYE+AE G+EFVF DSVEGWLY  PW++        
Sbjct: 188 TSTSGDAGTPEELGEIVELPSLGTSYESAESGSEFVFADSVEGWLYPPPWWHN------- 247

Query: 242 EELQEDYG-------LFFKDQILMAD-------YTDTFLWQN 251
             L+E+YG       +   DQ+LM++         + FLWQ+
Sbjct: 248 SYLEEEYGYNNLINSIIRDDQMLMSEPPAAECVGVEAFLWQH 277

[Close]

BLAST of CSPI01G19180 vs. NCBI nr
Match: gi|292668955|gb|ADE41132.1| (AP2 domain class transcription factor [Malus domestica])

HSP 1 Score: 239.6 bits (610), Expect = 6.0e-60
Identity = 162/276 (58.70%), Postives = 188/276 (68.12%), Query Frame = 1


Query: 2   ENDSTILNSSP-PPSPSSSG-SLSPPSSS-------SAVVESNRKRLKRPRENNNNNNNS 61
           EN+S+  +SSP PPSPSSSG S S P+S        S     ++KR KR RE +     S
Sbjct: 8   ENESSSNSSSPSPPSPSSSGFSQSIPNSGLNQLPVRSDSPGPDQKRAKRVRETS-----S 67

Query: 62  KHPVFRGVRMRAWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALTIKGTSAILNF 121
           KHPV+RGVRMR WGKWVSEIREPRKK+RIWLGTFSTPEMAARAHDVAA+TIKG SAILNF
Sbjct: 68  KHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAAMTIKGNSAILNF 127

Query: 122 PELAHQFPRPASTSPRDVQAAAAKAASMEIPTPPL------SSSSSTSTSSSSSSSS--- 181
           P LA   PRP S SPRD+QAAAAKAASME   PPL      SSSSS++ S SSSSSS   
Sbjct: 128 PGLAGSLPRPDSNSPRDIQAAAAKAASMETLNPPLLPPPSHSSSSSSALSQSSSSSSMVG 187

Query: 182 --SASLCPSSPEELTEIVELPSLGTSYETAELGNEFVFVDSVEGWLYSYPWYNRVSNAEQ 241
             S S    +PEEL EIV+LPSLGTSYE+AE G+EFVF DSVEGWLY  PW++     E+
Sbjct: 188 TTSTSGDAGTPEELGEIVKLPSLGTSYESAESGSEFVFADSVEGWLYPPPWWHNSYLEEE 247

Query: 242 VEELQEDYGLFFKDQILMAD-------YTDTFLWQN 251
                    +   DQ+LM++         + FLWQ+
Sbjct: 248 NGYNNLINSIIRDDQMLMSEPPAAECVGVEAFLWQH 278

The following BLAST results are available for this feature:

BLAST of CSPI01G19180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DREB3_ARATH	3.9e-51	63.45	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana GN=DREB...	[more]
TINY_ARATH	8.1e-49	63.49	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE...	[more]
ERF37_ARATH	9.6e-42	55.81	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana GN=ERF03...	[more]
ERF43_ARATH	3.4e-39	55.08	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF04...	[more]
ERF42_ARATH	1.6e-36	50.72	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana GN=ERF04...	[more]

BLAST of CSPI01G19180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWW4_CUCSA	8.5e-130	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G364460 PE=4 SV=1	[more]
D5L123_MALDO	4.2e-60	58.70	AP2 domain class transcription factor OS=Malus domestica GN=AP2D39 PE=2 SV=1	[more]
W6FG92_9ROSA	1.2e-59	57.98	Dehydration responsive element binding transcription factor OS=Morus notabilis G...	[more]
M5W330_PRUPE	2.7e-59	58.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010130mg PE=4 SV=1	[more]
F6HGL9_VITVI	4.6e-59	61.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03350 PE=4 SV=...	[more]

BLAST of CSPI01G19180 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11590.1	2.2e-52	63.45	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	4.6e-50	63.49	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	5.4e-43	55.81	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	1.9e-40	55.08	Integrase-type DNA-binding superfamily protein	[more]
AT2G25820.1	8.9e-38	50.72	Integrase-type DNA-binding superfamily protein	[more]

BLAST of CSPI01G19180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778660525\|ref\|XP_004148719.2\|	1.2e-129	100.00	PREDICTED: ethylene-responsive transcription factor TINY-like [Cucumis sativus]	[more]
gi\|659125585\|ref\|XP_008462760.1\|	1.1e-122	95.65	PREDICTED: ethylene-responsive transcription factor TINY-like [Cucumis melo]	[more]
gi\|1012083915\|ref\|XP_015954208.1\|	2.9e-62	65.20	PREDICTED: ethylene-responsive transcription factor TINY-like [Arachis duranensi...	[more]
gi\|694322854\|ref\|XP_009352529.1\|	3.5e-60	58.51	PREDICTED: ethylene-responsive transcription factor TINY [Pyrus x bretschneideri...	[more]
gi\|292668955\|gb\|ADE41132.1\|	6.0e-60	58.70	AP2 domain class transcription factor [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001471	AP2/ERF_dom
IPR016177	DNA-bd_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G19180.1	CSPI01G19180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 79..95 score: 9.5E-10coord: 57..68 score: 9.5
IPR001471	AP2/ERF domain	GENE3D	G3DSA:3.30.730.10		coord: 56..114 score: 5.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 55..105 score: 7.3
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 56..119 score: 1.0
IPR001471	AP2/ERF domain	PROFILE	PS51032	AP2_ERF	coord: 56..113 score: 22
IPR016177	DNA-binding domain	unknown	SSF54171	DNA-binding domain	coord: 56..114 score: 9.15
None	No IPR available	PANTHER	PTHR31985	FAMILY NOT NAMED	coord: 1..237 score: 3.1
None	No IPR available	PANTHER	PTHR31985:SF16	SUBFAMILY NOT NAMED	coord: 1..237 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G19180	Cla016785	Watermelon (97103) v1	cpiwmB084
CSPI01G19180	Csa1G364460	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G19180	MELO3C004579	Melon (DHL92) v3.5.1	cpimeB077
CSPI01G19180	ClCG11G002260	Watermelon (Charleston Gray)	cpiwcgB009
CSPI01G19180	CsaV3_1G030460	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G19180	Bhi06G001700	Wax gourd	cpiwgoB002
CSPI01G19180	Cucsa.235510	Cucumber (Gy14) v1	cgycpiB348
CSPI01G19180	Cucsa.116550	Cucumber (Gy14) v1	cgycpiB151
CSPI01G19180	CmaCh05G013580	Cucurbita maxima (Rimu)	cmacpiB792
CSPI01G19180	CsGy1G019110	Cucumber (Gy14) v2	cgybcpiB002
CSPI01G19180	Carg10846	Silver-seed gourd	carcpiB0601

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI01G19180	CSPI02G00940	Wild cucumber (PI 183967)	cpicpiB009

The following block(s) are covering this gene:

None