ClCG10G009290 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATAGCCGAAGCTTCTCCGACCACCATGGCTCCTCTTCTTCTACGGAATCTAGCCACTTCTCTCTTCGTCTTTTTCGATAAATTCCTCATCAATTTGTCAAAGAAATACAAACTTCTCGAGATTATTCACACCTTACTAATCTCCTCCTTCCTCTTTTTCCTCCGTTTACTTCCTTCCTTGTTCCCTTCCATCCATCCCGTTTCCGATGATCGGTATCCTCTAAAACCCCCAAAAACTGCGAGTTACGTTAGCGGCGGAATTGGAATCGGAAGCAGTAGCGGAAGCGGCGATTTAGGGATTTCTCGTGCCCTAACGCAATTGCTGTCGATTATTAGCCACGTTCCGGTCAGTTCTCGCAAGTATGAAGTGGTTCGATCGTTGGCGGAGAAGCTGATTGATGAGAATCACTGGGAAGGGATTGAGGAACTTCGCGAGGTCAATCGTGCGGTTCTTTCCGCGGCTTTCGATCGGACTATTGGTCAGATTGAGGCCAGGATGATAGAGCGAGGGTTTTTTCAGGACGATAACGAAGGCGGGGACGGTGCTGGTGGTGGTGGGTCGGTGGCTGGACCGATGGAGTTCCGGTTGGGTCGGGTTGTAAGGGCGGTTCGGTTGTTTGGAGAGTCGGCTTGTAGCCGGTTCGGGAGGGTGAAGGAGGGGGCGAACCAGACCGGAAGCTCGGTGGAGAAACTGGCGGCGGAGGTGCTTTGGTTGGCTCAAAAAATGGCGAGTTGCGGTTGTCGGAATGAGGCTTGTAGGCGGTGGGCTTCGGCGGCTCAGTTGGGAAGACTCTCTCTCTCGGCGGAGCCGCGGCTGCAGGCGTCATTGGTTAAAGTCGCAGGTATGACTCCATTTTCTATATATATATTTTTGAGATTTTTTCTTCTTTTTTAATGGCTCGTAAATTTAGCTGCATTATTATATTTTATTTTAATTTTGTTAAAATTAAAAAGAAAAGAAGATTAGTCTAATAAATTCTCATAAATTAAATTTATGAGTGCCAAAGGTTTTATTTACTGCACCTTTGATGGTTTAGACAAATCAAAAAGCATGATTTAGTGGATGCGATATCAATTACTATCTTTTTGATCATGCGGTATCGAATATATGCTAGTTGAATTATGCTTACGTTAATGTAGGTGTGTTTTCTATATATCTTAATATATATTTGAACTTTAATGTGTATTTACCAAAAAAAAAAAGAAAAAAAAAAAGTCATCCGTGTGTATCACGCTATTTAGTCGCAAAAATGCGCATTCAAGGAAGGATCCCCTCCCAATTTGTTTGAGACACAATGTGTCCTAGATTTAGAATGAAATTGTAACTAATTAGTTTAGGATTTGTTTTCTCTTTTCTCAATTTAAAACTGAAGCAACATTGTATTTAGGGGAAAAAAAAACCTTTTACCTTGGAGTAGGCTTATAATTAGAGTGTTTAGCCTTGCGGTTGTGCCTAAACTTTATAAGTAGGGCGTCTCTCAACATTGAATTGGTGGAAAATATTTGGTCATATATATTAGATTTGTGTAACTAGGAGTGGAGTTTATATATGATAGGTGAGTTTTCTTACCTATAAAATCCACCTTTTATATTGCATAGTAGATTTTATAAAAGTGCCTTATAATTAACTTGGATCACAAAGTTAGGCATTTGAATCTGTTAGAATGTTTATAATATTTGTAATATATTTGAATTTCCAAATTATCGTGGCCCACAAGTAGAGCTGCCTTCCTTTTAAATGAAAGTGAAAGCCTGGTGTGAAGTAATTGTCCCAAATTCCATGGAATATGCGATTTGAGAATTAGTTATCTAAATTGAATAATTCTACAACCTTTTCACTAATTTTTTTTTTTGTCTCTTCTTATCGTGTTTTACTTTTTATTATTTTTTCTTTTTAAAGAAAATTTATATTTTCATATAAGCTTGAACCAACTTGACGGCAAGATTTTTGTCTCTTTTTCCAATAAATAAATAAATAAAAAGTTATTTTTGTCTTTTAATGTTTGTCTCAATACTTTAAGTAAGCCTTTGGAATTGTGTAGCTTGTGTTTGGAATATACTGGTGAATGAATTACGTGGACTATCAGAAGTCCCGTTTTGATAACAGATTTTTGGGCAAGTTTTTGAAAATTAAATGTTTTTTTTTTTAAAATCTATTGTTTAGGAATGTTTTAAAAAACTAACTCTATTTTTTTTATGTATTATTTATTTATTAGTATTTTGACTTAGAATTCAAATGTTTAGTTGTTGTATTTTCAAATGTCCAATATTAATTCCTATATTTTCAATAAGTTTTAAATTGGGTCTCTATTAGTTTGTTTTTTTACTTTTTAAAAAAATTTAAATATTTATTAACATTTTCCTATAAATTTTGGAAATATATACTTATATTGTATTTTATTGCATGAAAATTATTGTTATTATTTAGCAAATTTCGACAAAAATTTAACTTCAAGAAATTAAACTTAAGATTTATTTAAAGTAAAAAAACAAGGTGAACAATCCCAAAATAAATATAAAGTTGAAAATGATATTTGAAAAAGTAATCTAATAATTGCCAAACAGCCTAGATAAGAGAATAAGTCACTGTTGAATGGCTTCCTATCTGTCTCACTTCCACCCAGGAATAAAATTATACATTTTGGGATTGGAGTAAAAGTGGGGTTGAGGGCAATTTGATGTATATTTTTTCAAAAACTTCTTGGTCATACTGTTTTGGTTCAGTTACCATTTATTTTATGAGTAAAAGACAGAAATAGAATCAATTCTTGGTTAAGCCTCCTAATGCAGAAATCCATAGGGAAATCATTGAGACTTCTAATGATAAGCATCAAAAACAATATTTACATTAAATTTAGGAATAAGAATAAAGTATTTGTAAAGTGAGAAAACTCAGTATGAAAATTGAAAGCTTAAAAAAGAGAAGTCCAATTTGTTTCTATTATTATTTATTTTAGAGAAAGGAAAGGGCTATGGTAGAAAAATAACCATTCAAATTATTTTTGTTTAAAAGTTTATGTTTACCATGTAGTAAATTTTAATTGGACAATTAGGTGGATTGTACAAAAATAGGTGCCATCTGAGAAGAACCAAAGTATTTTTCTTAAGGAAAAAGATCAAAAAAATGAAGAGACCTTTCTATATCTAATCATTGTAATATATGATTGTATGTGTAGCATTCTTGTTGAAGCAATGCCGAGAAATGGGAAAGGATAAAGATGGAGACGAGAGTGAGAAACAGCAGCAGATGCAGACGAAGTTGAAGATGCTGATTTCATGGCTTCCATTGCTATGCAGAGGCAGCAATGGGACCGATGCGCCCGTCCTAAGCATTGGTGAACGGCGAGAGCTGGAGTTGGTGCTAGAGGAGATGATAGGGACATTGCAACAAGACCAACAAGAGCAAGTTTTGGCTTTGTGGCTCCATCATTTCACTTACTCCTCCTCCTCCGACTGGCCGAACCTCCACGCTTCGTATGCTCGGTGGTACAGTGCCTCTCGTAAGCTCTTGATCCACCAGGATCAGTAATCTAACCTTTAAAACAAAAACATATAACCTTTTGTTAGAAAAGCTGTTAGTATTTGGTAGAAGTTTCTAATGCCATTTGAAAGTCATATATTGTATTTCACTTGCTAGGAGGTGTGATAAATGTGGCCAAACCTAAGTATAGTTCAGCTCGCTAAGACATATATCATTCATCAAAAGGTGAATCTCCTATCACCCCTCCCTTAACTCATTG ATGGGTATAGCCGAAGCTTCTCCGACCACCATGGCTCCTCTTCTTCTACGGAATCTAGCCACTTCTCTCTTCGTCTTTTTCGATAAATTCCTCATCAATTTGTCAAAGAAATACAAACTTCTCGAGATTATTCACACCTTACTAATCTCCTCCTTCCTCTTTTTCCTCCGTTTACTTCCTTCCTTGTTCCCTTCCATCCATCCCGTTTCCGATGATCGGTATCCTCTAAAACCCCCAAAAACTGCGAGTTACGTTAGCGGCGGAATTGGAATCGGAAGCAGTAGCGGAAGCGGCGATTTAGGGATTTCTCGTGCCCTAACGCAATTGCTGTCGATTATTAGCCACGTTCCGGTCAGTTCTCGCAAGTATGAAGTGGTTCGATCGTTGGCGGAGAAGCTGATTGATGAGAATCACTGGGAAGGGATTGAGGAACTTCGCGAGGTCAATCGTGCGGTTCTTTCCGCGGCTTTCGATCGGACTATTGGTCAGATTGAGGCCAGGATGATAGAGCGAGGGTTTTTTCAGGACGATAACGAAGGCGGGGACGGTGCTGGTGGTGGTGGGTCGGTGGCTGGACCGATGGAGTTCCGGTTGGGTCGGGTTGTAAGGGCGGTTCGGTTGTTTGGAGAGTCGGCTTGTAGCCGGTTCGGGAGGGTGAAGGAGGGGGCGAACCAGACCGGAAGCTCGGTGGAGAAACTGGCGGCGGAGGTGCTTTGGTTGGCTCAAAAAATGGCGAGTTGCGGTTGTCGGAATGAGGCTTGTAGGCGGTGGGCTTCGGCGGCTCAGTTGGGAAGACTCTCTCTCTCGGCGGAGCCGCGGCTGCAGGCGTCATTGGTTAAAGTCGCAGCATTCTTGTTGAAGCAATGCCGAGAAATGGGAAAGGATAAAGATGGAGACGAGAGTGAGAAACAGCAGCAGATGCAGACGAAGTTGAAGATGCTGATTTCATGGCTTCCATTGCTATGCAGAGGCAGCAATGGGACCGATGCGCCCGTCCTAAGCATTGGTGAACGGCGAGAGCTGGAGTTGGTGCTAGAGGAGATGATAGGGACATTGCAACAAGACCAACAAGAGCAAGTTTTGGCTTTGTGGCTCCATCATTTCACTTACTCCTCCTCCTCCGACTGGCCGAACCTCCACGCTTCGTATGCTCGGTGGTACAGTGCCTCTCGTAAGCTCTTGATCCACCAGGATCAGTAATCTAACCTTTAAAACAAAAACATATAACCTTTTGTTAGAAAAGCTGTTAGTATTTGGTAGAAGTTTCTAATGCCATTTGAAAGTCATATATTGTATTTCACTTGCTAGGAGGTGTGATAAATGTGGCCAAACCTAAGTATAGTTCAGCTCGCTAAGACATATATCATTCATCAAAAGGTGAATCTCCTATCACCCCTCCCTTAACTCATTG ATGGGTATAGCCGAAGCTTCTCCGACCACCATGGCTCCTCTTCTTCTACGGAATCTAGCCACTTCTCTCTTCGTCTTTTTCGATAAATTCCTCATCAATTTGTCAAAGAAATACAAACTTCTCGAGATTATTCACACCTTACTAATCTCCTCCTTCCTCTTTTTCCTCCGTTTACTTCCTTCCTTGTTCCCTTCCATCCATCCCGTTTCCGATGATCGGTATCCTCTAAAACCCCCAAAAACTGCGAGTTACGTTAGCGGCGGAATTGGAATCGGAAGCAGTAGCGGAAGCGGCGATTTAGGGATTTCTCGTGCCCTAACGCAATTGCTGTCGATTATTAGCCACGTTCCGGTCAGTTCTCGCAAGTATGAAGTGGTTCGATCGTTGGCGGAGAAGCTGATTGATGAGAATCACTGGGAAGGGATTGAGGAACTTCGCGAGGTCAATCGTGCGGTTCTTTCCGCGGCTTTCGATCGGACTATTGGTCAGATTGAGGCCAGGATGATAGAGCGAGGGTTTTTTCAGGACGATAACGAAGGCGGGGACGGTGCTGGTGGTGGTGGGTCGGTGGCTGGACCGATGGAGTTCCGGTTGGGTCGGGTTGTAAGGGCGGTTCGGTTGTTTGGAGAGTCGGCTTGTAGCCGGTTCGGGAGGGTGAAGGAGGGGGCGAACCAGACCGGAAGCTCGGTGGAGAAACTGGCGGCGGAGGTGCTTTGGTTGGCTCAAAAAATGGCGAGTTGCGGTTGTCGGAATGAGGCTTGTAGGCGGTGGGCTTCGGCGGCTCAGTTGGGAAGACTCTCTCTCTCGGCGGAGCCGCGGCTGCAGGCGTCATTGGTTAAAGTCGCAGCATTCTTGTTGAAGCAATGCCGAGAAATGGGAAAGGATAAAGATGGAGACGAGAGTGAGAAACAGCAGCAGATGCAGACGAAGTTGAAGATGCTGATTTCATGGCTTCCATTGCTATGCAGAGGCAGCAATGGGACCGATGCGCCCGTCCTAAGCATTGGTGAACGGCGAGAGCTGGAGTTGGTGCTAGAGGAGATGATAGGGACATTGCAACAAGACCAACAAGAGCAAGTTTTGGCTTTGTGGCTCCATCATTTCACTTACTCCTCCTCCTCCGACTGGCCGAACCTCCACGCTTCGTATGCTCGGTGGTACAGTGCCTCTCGTAAGCTCTTGATCCACCAGGATCAGTAA MGIAEASPTTMAPLLLRNLATSLFVFFDKFLINLSKKYKLLEIIHTLLISSFLFFLRLLPSLFPSIHPVSDDRYPLKPPKTASYVSGGIGIGSSSGSGDLGISRALTQLLSIISHVPVSSRKYEVVRSLAEKLIDENHWEGIEELREVNRAVLSAAFDRTIGQIEARMIERGFFQDDNEGGDGAGGGGSVAGPMEFRLGRVVRAVRLFGESACSRFGRVKEGANQTGSSVEKLAAEVLWLAQKMASCGCRNEACRRWASAAQLGRLSLSAEPRLQASLVKVAAFLLKQCREMGKDKDGDESEKQQQMQTKLKMLISWLPLLCRGSNGTDAPVLSIGERRELELVLEEMIGTLQQDQQEQVLALWLHHFTYSSSSDWPNLHASYARWYSASRKLLIHQDQ
BLAST of ClCG10G009290 vs. TrEMBL
Match: A0A0A0KXY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G109030 PE=4 SV=1) HSP 1 Score: 651.4 bits (1679), Expect = 7.3e-184 Identity = 336/399 (84.21%), Postives = 356/399 (89.22%), Query Frame = 1
BLAST of ClCG10G009290 vs. TrEMBL
Match: B9IJF8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s08030g PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 7.7e-125 Identity = 242/403 (60.05%), Postives = 309/403 (76.67%), Query Frame = 1
BLAST of ClCG10G009290 vs. TrEMBL
Match: A0A061E933_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_007464 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 1.2e-122 Identity = 235/397 (59.19%), Postives = 297/397 (74.81%), Query Frame = 1
BLAST of ClCG10G009290 vs. TrEMBL
Match: M1AXZ8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012580 PE=4 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 1.7e-116 Identity = 233/399 (58.40%), Postives = 292/399 (73.18%), Query Frame = 1
BLAST of ClCG10G009290 vs. TrEMBL
Match: A0A0V0I8F5_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 4.2e-115 Identity = 231/399 (57.89%), Postives = 292/399 (73.18%), Query Frame = 1
BLAST of ClCG10G009290 vs. TAIR10
Match: AT5G64230.1 (AT5G64230.1 unknown protein) HSP 1 Score: 297.0 bits (759), Expect = 1.8e-80 Identity = 171/390 (43.85%), Postives = 244/390 (62.56%), Query Frame = 1
BLAST of ClCG10G009290 vs. TAIR10
Match: AT3G19920.1 (AT3G19920.1 unknown protein) HSP 1 Score: 161.4 bits (407), Expect = 1.2e-39 Identity = 117/354 (33.05%), Postives = 179/354 (50.56%), Query Frame = 1
BLAST of ClCG10G009290 vs. NCBI nr
Match: gi|659125788|ref|XP_008462861.1| (PREDICTED: uncharacterized protein LOC103501143 [Cucumis melo]) HSP 1 Score: 679.5 bits (1752), Expect = 3.6e-192 Identity = 349/399 (87.47%), Postives = 368/399 (92.23%), Query Frame = 1
BLAST of ClCG10G009290 vs. NCBI nr
Match: gi|449439003|ref|XP_004137277.1| (PREDICTED: uncharacterized protein LOC101222931 [Cucumis sativus]) HSP 1 Score: 651.4 bits (1679), Expect = 1.0e-183 Identity = 336/399 (84.21%), Postives = 356/399 (89.22%), Query Frame = 1
BLAST of ClCG10G009290 vs. NCBI nr
Match: gi|743897147|ref|XP_011041858.1| (PREDICTED: uncharacterized protein LOC105137724 [Populus euphratica]) HSP 1 Score: 456.4 bits (1173), Expect = 5.0e-125 Identity = 241/403 (59.80%), Postives = 310/403 (76.92%), Query Frame = 1
BLAST of ClCG10G009290 vs. NCBI nr
Match: gi|224141233|ref|XP_002323979.1| (hypothetical protein POPTR_0017s08030g [Populus trichocarpa]) HSP 1 Score: 455.3 bits (1170), Expect = 1.1e-124 Identity = 242/403 (60.05%), Postives = 309/403 (76.67%), Query Frame = 1
BLAST of ClCG10G009290 vs. NCBI nr
Match: gi|590688377|ref|XP_007042930.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 448.0 bits (1151), Expect = 1.8e-122 Identity = 235/397 (59.19%), Postives = 297/397 (74.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|