ClCG06G004180 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G004180
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Novel plant snare, putative
Location	CG_Chr06 : 4772612 .. 4793237 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCTCTCCTTTAAGCCCTTCAGTTAGCTTTGATACAACCAGAAACTTCAGGACCATTCACAGATATTAATGCAATAAATTTCCATCACCCTCTTCAGTTTACTCTCCCGGCGGAATGGCTAGCAGTGTGCAGAGGAGTCCTCGGTTGGATCAGATCCATGGCGAAATTCGCGACAGTTTTCGTGCCATTTCGTATGTTCTTTAACCACGCCCTCTCTATTTAGTGATTGTTTCTGCTTATATTGCCATGTTGTTGTATATATGCATTAAACGCTTCCAATGACAATGGTTGGTGTCTCGGGTAATGATCAATTTTTATGTTCGGGGACCCTTCAAGCCTTTTGATTCTGTTTCGTCTCTTACACCTTCGTTGAAGTGTGGTTTTGTGGATTAGTAGACATTTTTTTTCCCTGTTAAAATAATGTTTACGAAAAACTATTCCATTGACCCAATGGAAGGGAGAAGAAGACCCCATTCCAACAATGGAATTTAAGAAAGACGTCTGGTTAGCGCATTCGTTTGTTAGGCTAGGTCAGTGGACCTCATTTTAAACATCTGCATTGATAAATGGCGATGTAGTGTCTTTTAGGAATTTTTTTTTTCCCTTTCTGTTTGTATTCTTTGGGAGTTAGTTATTGACTTCTTATTTAAAGACTTCCTTAGTTATTTATTTTTACCTTTTGTTAACTTTTACCTTTTGGTAATGGTTTAATTTTAAGAGATGTAACTTTTCTTCAGCTTCTATTTTATTTCTTTACCTTCGGTTAATAAGGTCAAGTTAGTTTGTATTCTCAGTTTTCAGCCTATACATAAGGCTAATTACTTTCAGTTGAAGGTAATAAGAAGTTAATCATTTCTTTGAGAATTTTGTCCTCACCAAATGAAATGACCACCAAAGGTGCATTGTAAAAATGATCTTCAATCATGAAGAAAGACTATCTTTGAAAGGGTGTGCATAGTGCATAGGTTGACTGGGGGCATCATAAACTAATTAAATGTTTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAATCTAATTAAAGGCTGTTTGGAAGTGTACCCAAATCCTTTTTGAGTTTTTGAAAAAGACAGTGTATGAAGATACTCCAAGTTAATGGTGGGAGCAGATTGGTTGGGCACTTTAATAAGAGAGTTGAAGAATTTCCATCCCTTCTTTTCTTTTCCCACACGAATGATGACTTTGTTAAGGCCCCCACTGATGCAGAGCTTAATGACTTCAGCACAATGACCCTTTCAGCTGGTGGTCTTTTCAACCCAGAGATCATATTTGTCAAGATGACATTTTTGGAAGAATTGTTGGTTGAGGAGGGCGTCGATCAAAACATTGAAACAAGAAGAAATCCAAGATCAAGATTTTTTCTTCAAAGATGAATGGTTGATCTTTCCATGCCTCGGTGATGCGAAAGCCATGGTCAATCTCAATGGTGGAAGTCTTGTTGTTGAGGGTGAAGGAGGGAAGGGGGGAGGCAGAACGGCGGGACATGCCGTGGGAAGAATGGTTAGAGATGGAGAATGGTGGATGAGGGGGATGGAGAGGATTTCATTGGGGAGAGGGCGCCTTTCCTCTTTATGATTGTATATACATAATATTGAAAATTTGAGTTTTATTGTTTAATAACTTGGATATGTTCAAACTATAAAATTGAACACTTGGACTATGTATGTCGACGATTAGATAATTTGATAGGTTGGTTATTTTGTTAATGTTAGCAGCTTTAACAAATTTATCTTTAAATGAAAATTCTCCATGTGAAATTTACCATTTAAATGATTTTTTAGTGAAACACGCTGTGTATAATTAAAATAACTTAAAATAAAATTTGTTAAATAATAGAATTTGAATGAGAACTATGGATATCCTTGCTTGTGGATATCTAATTGTTCATTTATATTCATGGATTTATGGATGTAGCCTCTCTATCTCTGTAATTACACCTTTTTTTGTGTGATTAAACTTGGTTTGCAAGGTCTAACATGGTCAGTGATCAAAGCATTTGAGAATTGAATTGCTTGAAATGTGAGTTTCTCATGTTTTATAGCTGGAACACAGGTATACGAATACTCCTGCTAATAAGAGAGTAGAGCTGTTTGATGAGAGAGGCATTAATGAATCTACGACTGATGATAATGTTCAGATGACACCATGTAAGACTTTATATACTGTGAAATCCATAAGCTTGTAGCTAAATATGTCCCTTTTGGAGGAGTTTCTACCCTTGGAACCTTTAGGGCCTTCTATTTTTGAATTTGGAATTTTTGTTTTAGAACTCTTTGTCTCCTAGTATTACCAATCTCAAGTCGAAATACCATTGAAGGATCTCCAACTTCGTTTCCATCTATTACTCTTTTCTTATTGGCCTGAATGTTCTATTGCTTTGCTTTACACATTTTTTAACTTAAAATAATTAATTAGTTGTTTCCCGTTTCAACCTATTGATGTGATTTGTTCACAATAACTATGCATTTTTATTTACAATAATATTTCTTCAGTTTTGATATGTTCAGCGTGATATAAATCTCATGATATAATAAACTTGAGTTGAAGGAACCATAATTTTGTTCCCTATTTTATAATAAGTAGATTAAAGGATAGGTTTGCATTGCAATCCCGGGCTTGAGGATGTGACAATTGAAATATAAGTAAAAAGAAACAGTGGCTTTGGTTCCAAATTTCAATCTTCCAGATGTGTTCAAGTAATAAATATTAAATATGGTTTATTGTGGAGGGGTGAATTTCTATATTGTCTATAGGGCAGAAGGAAGAAATAGTATGATCATACTTGTAGGAACTATGCTTTCTTTGAGTTTTTTGATGTATATGTGAGTGTTGAAAAGTGAGAGACTTTTTAAGTATCCTCTTTTCTTCTATATATTTCACATTCTAGTGGCATGTCTTTGTGCTGTAGCAATAATAAGTCAAGAACTGACCAATGTTGGGAAGAAGACAATGGATGAAAATGATCCTGCGATTGACAGCTCTAAAATGGTGACCAGTTTTTTATAATGCACATGCTTTCTCATTTTGTTTAGGTTTTGTTTTGTTTTTTGTTTTTTGTTTTTGTTTTTACTGTTATTCCTAATGCAAAATATGATCTTTAGGTAGTTGAACAGACAGTTGAAATGGGAAGGCAATCTGCTTTTACATTGGAAGGCCAAGTAAGTATATAAATTCACGATTCTCTTAAAAAGAAGTATTCAATTGGTTTAGCTCTATTCACTAGAATCTTTTTGGTGTTTTTGTTTTATGACTTGGCAATTGTTCTCACAATGCAATGCGTTACGTCTAGTGGACGTTATCAAGTTTAAGTTGGTAGATTACAATAAATTTAATTATATAAGTATACTTCAACACACCTCCTCACTTGTGGGCTTGAAGATGGTCTAGCAAGTGAAAATCAATAAGAAAAAGGACAACAAGTGCATTTGATGTAAAACTACAAATCACTAGTAAGGAAAAGAAGGATAACAAGCGCATTTGATGTAGTAAGATTAGAGTAAGGGTATCTTGGTCAAATCTTTAATTGATTAGGATAAGGATCGGTTCCTCGATTGATTAGGATTTGGATTAGTTTCTTTGGTTTATTAGGATTTGGATTACTTGGCTTTCCAGTTCTCTATAAATTGAAGAACTGTCTTCCTGTATTGATAACTTTGGATTCATAAGATTTCGATTTTTTCTGGGAGATTTCTCTCCTTTTATCTTTTAGGCTACATTGGTCGTTAGATAAATCGAGGAAAGAGTTTAGTCATTGGTTTTAATTGTGATCCATCTAAGGCTTCAAGATGGGCCATGATGGCTGCTCGTAATGTAGGAGAATTTCTCACGATTGAGTACTTTGGCCATATTGTATCAGACCAAGGAGTCTTAGCTCAGCCATTGAAAAATGAGGTAATGGTGCAATGGCGAAAGATGTAATTGTCTTTAGAGTAATATAGCGCAAGATGTCTTTGATAAACCTAAAAAAAGCAATGACTACTGTTCCAGTATTGGGCCTTCCAAATTTCTCTAAACAACCCATCAGGGAATCGAATGCTTTTGGAGTTGGTTTGTGTGTGTGTACTGTGCTAATTTAAGACCAACAACATCTAGTATTTTACTTATTATTTATTTTTTTGTTATGCTTTACCTTTTGTCCATTGACATGAGGCTATTCATTATGAGTGTGAGTTAATGGCGATTGTTATGGCAGTGCAAAAATAGAGACCACACCTCCAAAGTCAGAAGTTTGTAGGCCGTACGGATCAAAAGGCTTTGAAGTTTTTGCTTGGTGAAAGGGTAATAGCAGTTGAATACCAACATTGGATAACAAAGCTCCTAGGGCATGATTTTGACATTCAAAACAAAGTCAAATTAGACAATAAAGTCGTAGATGATCCAGGCTTCCCCCTAAGATTGCTTTAACAATTTGAGTATACTGGCAGGAACTAATGTGACCGTCATTGTCAATCAGATCAAACAAGATGAGGAACTCTCCAAAGTAGTGGAGGTATAGAAGAAGGGTGATAATCCACTAGAGGGATACAACCTCAGAGGGGACTTGTTATATTTTCGAGGATGTCTGGTATTACCCCAAATTCTCTGCCAATTCCTTTACTCTTGTAGGACTATTAAATGACTTGTTGGGTTGGTCAAGACTAAACAGAGGATTGCCAAAGAAATCCATTGGAGTCTTGTATCCTTGAGCAGTAGTTTTTTTCATTTCTTGAATGGAAAGTTTTGTATATTGTTAAAAAAAGGATGGCCAAAGAAATCTACTGGCGAGGAATGGAAAGGAGGATCCAGTCCTTTATTAACAATTGTGCAGTATGCCAACCATTAGCTTCAGTTGATTTTTTAAAATGTCATCCAATACTTGCTAGAATATGGGAAGGAAAGATTATAAAATGTACACAGAATATAGAAAGAGACAATCTTAACAATTCCTAAAGCATAGCTGAATCAATTAATCTTGATTTTCTACTGAATAGGATGAGGAATCTCTTCACACTTTCTTGAAATAATGATACTAAATCATCACTAAAAGAATCTTGTGCACTAGTATCATGAATATTATCTTTTATAAACTTAATGGTAGAACACTACTCAAACTAACTTCAGATGCAACATCACCATCATCAACATTATGTGAAGGGGAAAAAGAAGCAGTGTCATCCTTTGAAGAATGAAATACTCCTTTAGTGAAAACATAATCAGAATTTACTACAGTAAATTTTTGTCGACCGCTATTACGAGATATGTCTTTCTTGACAGATGGAGCCAAAAGACTAGAAACATTTCCTTCATCACAATTTGGATTCAAAGTATTATCCTCAATTAATGGAGGACCAAAGAGTGATGCCACTTTTCTTCAAGTATAGTATTGGAGATAGCTGCAATAAAACAATTATTTACCTCTTGATTGCTTAGGGACTTAGAAGATTCAAGCTCCTTAAAGGGAATCAACAAAAGGCATCACGTTAATGACCACAATAGGCATCTTTGTTATCCTTTGGAGCATGCAAAAAATCTAGTAAATCATCAAAAGGTGAACAACCACGCTGAGAAGACTTTTCATCTTCAATTACTAAGCTACGGATTTGAAAAACCTTTTAGATCCAAAGTGCTTGTATAAGAGTCATAAGACATAGAAGAAACATCAATTGTAGTGGTATCTGCAAATCAAAGGAAATTTTTTTCCCTCTTTGCATCCTTATTTTCAATTGCAGCAGGGATGAAACTACAAAGTTCTTTCGAAATTTAATATAAGATGCACTACAATCTAACAAATTTAGGATCTTTGTTGTCCTTTGGGCATTCACTCATCCAGCTCTTTGTTTTGTGCTCTTCAGTGGGACTTATTGTTATATCTATTTTTACTTTTGTTTTTGCTACTGTAGCTATCTTTGCTTGTATAGTAAAGTTGTCCAATGATGTACTGGTTGTATTTCATTTCTGCTACTAGGTGATGAGGATATATTTAATTGGATATGATGTGGGTGCTAAGGGGGTGTCAACTTAGTTGAGATTCGTGGGTGCACCTCCTAAACCTTAGGTCTCTTTTTTGTCATAGTACATATTTTGTACTTTCAGCATTAGTCTCATTTCATTACATCAATGAAGAGGCTTGTTTCCATTTTAAAAAAATGCACATTCAACTGAGAACCACTGACAAAGAATTCCAATTTAAATGAACAACTTCTTTATCTTTTGTTATCCAAAGAGAGGATTTGGAGATGGAGGGCTTTGGACAAAATAAGCCTGTAACCGATGGAAGAGAAGGTGGGATGAATGAATCCACAATATCTATATAAGAATTAGGACTGCACTTCAAAGATTGAGAATCTTTCAAGCCAAGCTTCTAAAAAATTCCATGATAAAGTTTCTAAACATATCCCAAAAAGTAAACCGACCATGCTTTAAGAAACCACAAGAAATACTAATCACATTTCTTCCACCGGATATGGGCCGCACAATACAATAAAAAATTGACCTTGAAGGAAACCAATAGTTCTGAATTCTGGTTTTCTTTAGGGTCACATCTCATATATGGGCCGCATCTTGGATATGGTTTGAGAAATCTATGGTTGAAATGATGCTTTGACTCTACATCTCATATTTTCTCCAAGCAATATAGAGATGGAGGTGGCTGATTGGTAACATAAGAAAAATGAGTGAAACAAGGTAAGTATGCTCTCTCCTCTTTCTTCTCTCCTCCTTCCCCTTTCCCTTCTCTTCTCCTCCTTGTTAGATCAGTAGCTCCAGTCCGCTTCATTTCTTCCTATTCATCTTTCTTGTCAACCATTCTTCTCTGAAGTATGAAAGTGAATAGTTGTAACATGAATGGGTTCTATTTCTCTATTTGGCATGATTCTGGTTCTTTTTACGTGGAAGACTTGGAAGTCAACAAGTTCCTTCTCCTCTCGAAATCTTAGATCAATTGGTTTGTTGAAAATATTTTAGAAATGATCAAGGTGTTTGCTTCATGCTTCTTTGCGAGGAGCGGCCGTGATGGTTCGGGTGCCACAAATTTGTCTAAGTTCCATGGCTCCTTAGGATGGATTATGAGATGCGTTGTTTGGCCTTCTTCGGGAGTAGATACTTTATTCATATCCCTTTCGGAGAATCGATGCAAGGTTGGTATTCTTTTGCGATAATGCTCCTAGAATTTCAGAAAGACTTTGAAGCTTCTGTAAGCCATTTTTTTTGAGAAGGGAGTCAACAAATACCGTTTGGCCAAACCAGGGAGGAGATTACATGGACATTGTGAAGCCTCCGAATGTTCATCAAAGCTCAGCTTCCCCTTCGAGGAAACAGAGCATGGAAACAACATCTGTTCCTTGTCTGAAGCAAGGCCCTGTTTTAGTACTCGATAAACAGAGTAAGATCATTATTGGGGGATAAGGAATTTTGACGTTTTTCAAGAAGATTTTAGCAATTTGTGGATAGTTTCCAGAATGTTTGAGTTCAATGACTGGTCGGAAATAGCTAAAACATTAAAAAAATCACTTTCACTCTGATGTCATTGTCAATCCTTTGTTTGCAAAAAATGTCTTAATTAAACTGGACCAAGGAACTCTTGAGGAGTTGATTGAGGCACCGTGCAAATGGTAGAGTTTTGGATCGTTTTATCTGAAGTTTGAGAAGTGGAACAAGTCTGTGCATAGCTGGCCATTGTATTTGAAAGGTTATGGATGATGGATCTCAATTAAGAATCTCCCGTTAGACTATTGTTGTAGACAAACTTTTGAAACTATTGGTGCCTCTTTTGGAGGTCTAGAAGATATTGCTTCGGATACTTTGAACCTCCTTAACGTTTTTGAAACTAAGATTCAAGTTAAAAAGAATTTATGTGGTTTCATGCCATCAACCATAGAAGTTGCGGATGAAAAGCGTGGTTTTATATTTTTGAATTTTGGAGACATTGAATTAATTGAACCTCCCTCAAGGGTGAAAGGTGACCTATTTGTCAAGGATTTTACTAATCCAATTGATTTAGTTCGTTTGAATTAAGTTTTACAGGATGGAAGATTATGGTTTGAATCTTTAGATCCTGATTTGGAATTTCTGTTACCATCTTAGTCATCCTTAAATTATTCAAGAAATCCATTAGCTTCAAGAATAAAGTGGAGAAACTCCTCATTGCAAAAGCCAATGGAAGTTGGTCATTTGGCTTCAATCAAACCAGATTCCATTCCACTGCAGCTAGAGAAGACAAGAGGGAATCCTTCTAAGTTTGATGTGAACGCATAATTTCCTTTATTGAAGAGTGAGAAAGTCGTTAGGGATATAGCTGTTAACAAAACAAAGACCCTCAATATCCCTTCGAAAGAATTTCAAATTTTTGCCGTCGAGAGTGTTGATGTCTCAGTCGATTCACTTTCCAAGATTTTCAGCCCCACGCTTGAAGTTGTTTCAAGCCTGTTCGTTTCCCCCACCAATGAAGTCTCACTTTTAAAGGATAGAGCTGTCGGTTCCTTCTTCATTGAAAAAGAAGTAAATGCTAGCGCAAATATTCTCTCTCCTAAAATTCCAAAAGACAGCAACCCTTTTCAATTAGTTGTCCCTTCTCTAGTGTTCCACTGCAAAAGTAAGTTTGATTCTTCTCCCCCAGCGTGCGACTCTCATTAGTTGAAACCAAAGAAGCGTTCAAAATTACTCAAGCCTTCCCCCAAACATTTTGTTAGGAAAAAGACTTCGTTTCTAAACTCTTGGCCTATGATTGTGAACTCGGATTTGCTTGAGGAATGCTGCGTCAAAGTTCAAATCCCAGGGCTTATTCCTGAAAGTAAATTTTGTGAGAGGACTCCCGGCTAGTCTTTCAAGCAACTATCATCGCAAAAAACAAGATTCAAGGAATTGGATGGGGTTTCATTAGCAAGTGCTAGTAGTGAAGAGTTTGAAAATTCTGTAATAGAGGAATTACGAGATAAAGAAGAGTTATTTGATGGGTTTGGTAATGACATTTGTCATTTATTTCAATCAGAGAAAGCTCATAGGTTTGGTAAGGCTAAAGACTCTTTATTTTCTCATCTTGAAAAGAGTGAAACTCCACAACATCTACATTCTATAATTGATGCTTGTGGTATCGTTCTTGGTTGAGTTTTGTGTTTAGATGTCTGTGCTTTATTGGGGCTGTTTTTGTTTAGTCTTCATTAAAGATCCTACTGTAGTTCACAAGACGCTTGGAGGCACCCCTAATTGGTTGGTGTTTATTAGTTGTTTTGAAGGTTTTTAATATGGTTTTGGTTGTCACTCCACATTTTATTCTCTGGTTAAACTCGAGTTCGGGTGGTCTCATCAAGTCTTTCAAAAATTTCAGATTGGAGGGCCTGGTTGGTCATGCTTTCAGAAAATTTAGAATGTTTGTCAAAATTCTTTGTTGCTTTTTTTTCCCAAGTCTTTTGTCCCTGGTTGTTTAAGAACTATGTCTGGCGCAGTTTAAGGGGAGGCTTCTGCGTTGGCATCTTTCTAATCATTTTGGTTATGTTTTTAGTTTCAAGCTTCATCTGCCTTCATTAGCTTTCTAAGTTCTTCATCACTCTTGGCTCAAGCTTTGCCAACTGTTTTGTTTGTTATGTTCTTTGGGTGTTTATATTTTACTCTCTTTTGTTTCCAAGGATTAGTCTTTTCATTTTTGTTCTTGTTAAATCGTTTTCTTGGTTGTTTTCTTTCATTACTTGTTTTTTTGTACTATGAGCTTTTGTCTCTTTTCATTATACCAATGAAAAAGTCTTGTTTTCGTTTTTTCTTAGAAAAATTTAGAGATGGAGGTGATTGTTCCAAGCCAAGCATACTCCTTGGAGTTATAGTAAATAAAAAAAAAAACTTGTGGAGTTTCCATGATTGAGCCACTAAAAAGGGAATTGTACCTTGTTATAGGCAGTAAATATCAATTCCTTTAAGTCTTTCTTAACCATAGTTGCATATCCTCAAGATTCTTCTCATTTGGATGTAGTCTCGATTCATTCATGTATTTCTCCTCTACTTGAGATTTATGGCTTAATCCATGGTCTTTGCCTTCTTGAAGTCAAAGCCATGAAAGGCAGTCACGTAAGCTTTTGTTAGCTTTTTCTCTATGATCTTCAATAAAGACTTCTTTAATATTAAGTTACATTAAGATTAAGTAAAGGTTTATTCAAGCTACTTTTTCTAGCCTCCCTACTTACTATTTTTGTCGTTGTTTCGGGCTCTTTCCTCTATCATAAGTTGTCTTGACAAGCTGACTCGTGATTTCTTTTGGGAAGGTCTAGAGGTGATGGTGGCATGCACAATGTTAATTGAGCTATCTCTCAGCGGCCTCAATTGTTGGGTGGCATGGGACGGGTAATTTTAAGTATTGTAATTCTACTCTTCTTGCTAAATGGACGTGGCGTTTCATTATTGAGCATGATGTCTTATGGAGGAAGCTTATTATGGCGAAGTATTATTCCTCTGATTGTATTTGGCCCTCTCCTATCTCTCGAGGATCATCTAAAGCTCCTTGGAGGTCCATTTGTCATTACATGGATTTAGTTGTGGATCTGGTCACTTGTCTCCTTGGTTATGGTGGTTCTACATCTTTTTGGCATGATCCTTGGCTTAATTGTGGTGTTCTTGCCACTACATATTCGCAACTCTTTCGGCTCACTTAACATTTAGAGGCTATGGTAGCCAATGTTTGGGTTCCTTCCACGTCTGTTTGGAGTCTTAATCTGCTACGCAACCTCACTAAGTTGGAAATTTTTGAATGGGCCTCCCTTTTTGGCTACCTGGCCCCAATCAGATTGCGTCCCTTCCCTGATTCTTGGTTATGGCCTCTTGACCCTTCTTCAACCTTTACTGCCAAATCTTTGATGGTTGACTTGGTGGGAGATTTGTATTCTGTTCTGTCGGATCTTTATAGTGTTCTTTGGGAGCTTAGCTGGGGTGCCATTAACACTGTTGATCATCTACAGTGCCGATTGTTTTATATGTCTCTTTCTCCATCTTGGTGCCATATGTGTCATAGGAATGCTGAATCGCCAATTCACTTGTTCATGCATTGTTCCTTTGCCACTAAATTTTGGAACATTGTCTTGCATGCGTTTGGTTGGTCTTATACTTGCCCTAATAGCATCTCTGAAATATTAGCATCTTTGTTGGTGGGTCACCCTTTTTGTGATACTAAGAAGACTATTTGGCTGGCCATTATTTGTGCTTTCTTATGGAGCTTATGGAGTGAACGGAACAGATGACTTTTTAATAATGATTCTTTTTCCTCTTTTCCTCGTTTTATGGAGATTGTTTTATCTATTGTTTTTTCTTGGTGTAAAACGTAGCCTCCTTTTACTCATTTTAGCTTATCATTTTTAGTCAATAATTGGCTTTCCCTTATGTAGCTCTTGTAATTTTTGGGGCTTCACCTTTATATATAGAAATGTTTCCTTTACTAAAAAAAGATTAAGTAAAGGTTTAGTTTCAGCTCTTTTTATTATATCTTCCATTCCAAACGGAAAAAAAAAAAAAAAATCAAGTAAAGGTTTAGTTGTAAGGACTCTTTCTCTCACCTTGTCTATGTTTTATTAATGGTTGCATTAGTAGTGCATCTCTGTCCAATGGCGTCATACAAATACAACTGTTGCATGTTGCCAATATTTAACTATGGAAGTATTGAATGACAGAGTCAACCTGGATTACTTCCGTTTGCTCATGATCATGTTAAGGATGGGTAAATGAACTAAGAACCATCATTTGGGCGGTCCATTTCTACTGTAGGAAATATATTGCATCATGCACAGAATTTTTTATGGAATCAAAGTTGCATTTTCACTATAATTTTTGGTTGGTACTTTCCTGTAAATGTAGCTTGATTTGATATCCTGCCCCCTTGGTATGAGTACATTCTCACTGTTATCATTGTTTCTTATTTGTTTGTCATTTTCTGCTTTGAACATTTTGTATCCTGTGTTTTGCTAATAATATTTCCTCATCATTAATTTTTACACAAGTTATTTTGTTGTTGGGTATTGTTTGTAATGTTATCATGTGTAATTGCTTAGGCCACAGCTACGAAGAAAATAATTGCTATATGCCAATCAGGTGGTGAGTTTGTGAAAAACAAAGATGGATCCCTGTCTTACAATGGGGGCGAGGCCTATGCTATAGATATTGATCAACAAACAAATTTGGATGATTTGAAGACAGAAGTAGCAGAAATGTTTAGTTGCAGTATAGATACAATGTCCATCAAGTATTTTCTTCCTGGTAACAAGAAAACTCTCATCTCAATATCCAAGGACAAGGATCTAAAGCGGATGGTAAACTTTTTAAAGGATTCCATCACGGTTGATGTGTTTATCTTGTCAGAGGAAGCTGCTGCTCGGAATTTATCTAATATGCCTGCTAGTAGGTAGTTAATCAATGAGTCATGTTTATTTTCTATACTTATTCTGTTCCGTTCATTTTGCCTTATTTTTAAGTCTGCCCAAACCCCCTCATTCTCATTGCTCTATTTAGTATTTATTTGTCTGTAATAACAGTAAATGGCATATCAGGTTTGCTCTTTATCAGTTTTCTAGCCGATGGAGGTCCTTTTTTAATTCCTATTCTTTTTTTTTGAGGATTCTTCATTCTCCTATTCCTTTCTGTGTTTCTTTTTCATTTAAAATGTTATCTTGAAAAAAAGGTTGGATTTTGAATTGCTATGGTGGGAATGGAAGTTTTTGTTCCTTTGTCACACTTATTTTAATAAAATTCGCCCATTAGATATTTGTGGCTTGGTTGGGGTTTGTCTATAAATAATTTTGTTTTTTGAAAAGTCATAAACATTATTAGTATCGTAGAATTTGGCAATTATAGATACCTTTTGAATAAATACTAAACTTGAAAGATTTGGAAATAGCCATCACAGTTTCTTATACTTCTATATACTAAAATTAATGAAATTATTTTTTCTATGGGTGTAATTAACGGTTTATGAATTTCACTTTAATTACAAACAACTTTATGTGCTAGAATTTTTTATATACAATGTTAAAATATCTAAATTTAGTTATTAGTGTAAATGTTTAATAGACTAAGAAAACTTTTAATATTTCAATATCTTTTAGGTTTCTTAAGAACCCTATGCATCTATAAACATTTGCATTTTAATATCTCATGGATTGTGCGTTTTATTCACTCAAGCATCTAACATATACTGAGTGGCCCATAAATGACATTTTTCCTTAAATTTGTGACGCAACCTTTAAAAATGCAGGTCAAGTAGAACAACAGTTTCTGAGGCTGTAGTTCCTGTAGTTGAGCCCGTAGATGTTGCAGTTGAGACTATCATCGCCATTGATCAGATTGGTATGGACATATCCAATGAAGTCCCTTTAATGTGTGTTCCTGCAGGGTCCAGTGATGAAAAACATCGAAAAGCTGCACAACAATGGGAAAATGCCATTATTGGCGTAGACCAAAGATTTAACAGCTTTAGTGAATTCCGAGAAGCCTTACATAAGTACTCAATTGCACATGGTTTTGCTTACCGGTATAAGAAAAATGACAGCCATCGTGTCACTGTTAAATGCAAATACCAGGGTTGTCCATGGCGAATATATGCTTCAAGGCTGTCTACTACCCAACTGATTTGTATCAAGAAAATGAACACAAATCATTCATGTGAGGGGGCTGCTGCTAAAGCTGGGTATCGGGCTACTAGGGGATGGGTGGGAAATATCATAAAGGAAAAACTAAAAGTCTCCCCAAACTACAAGCCAAAAGATATCGCAGATGACATAAAACGGGAATATGGAATTCAACTGAACTATTCACAGGCATGGCGTGCAAAAGAGATAGCAAGAGAACAGCTTCAAGGCTCCTACAAGGAAGCATATAATCAGTTGCCACACTTTTGTGAGAAGATCAAAGAAACTAACCCTGGAAGTGTTGCTTCATTCACCACTAAAGATGACTCGAGCTTTCATCGTCTATTTGTATCATTTCATGCATCAATTTCTGGTTTCCAGCAAGGTTGTCGACCTCTCCTCTTCCTTGATAGTACTCCATTGAACTCAAAGTATCAGGGGTTTTTTTTGACTGCCACAGCTATAGATGGGGAAGATGGCATATTTCCAGCAGCTTTTGCTGTTGTAGATGCCGAGACAGAGGAAAATTGGCATTGGTTTTTACTGGAACTGAAATCTGCAGTGAAAAGGTCTGAGCAGATTACATTTGTAGCAGATTTTCAGAATGGACTGAACAAGTCTTTGGCCGAAATATTTGACAAGTCACACCATAGCTACTGTTTGCGTCATCTAGCTGAAAAGCTTAACAATGATTTAAAGGGCCAATTTTCTCATGAGGCCAGGCGATTTATGATTAATGATTTCTATGCTGCCGCTCTCGCATCTAAACTTGAGGATTTCCAGCGCTGTGCTGAAAGCATAAAAGGAATTTCACCTGATGCTTACAATTGGATCATACAAAGTGAACCACAGCATTGGGCAAATGCATTCTTTGGAGGAGCAAGGTATAACCATATCACATCAAATTTTGGACAGCAGTTCTACAGTTCCATATCTGAAGCACATGAATTGCCTATAACACAGATGATTGATGTTTTACGGGGAAAAATGATGGAAACAATATATAGACGCAGGGTTGCATCAGACCAGTGGATGACAAAATTAACACCAGCCAATGAGGAAAAGTTACAAAAAGAAATATCAATTTCGCGGTCATTTCAGGTTTCACTATCCCATGGAAGCACATTTGAGGTTCGTGGGGAATCTGTTGACATTGTTGATGTTGATAATTGGGATTGTAGCTGTAAGGGATGGCAGCTTACTGGTTTGCCTTGTTGCCATGCCATTGCTGTCATTGAATGCATTGGTCGGAGCCCATATGATTATTGCCCCAGATACTTCACAGTTGAGAGTTACCGCCTAACGTATGCTGAGTCAATACATCCTATTCCAAATGTGGACAGACTAATCCTGGGTGAATCCACTGAGGCACTAGTCACAGTAACCCCTCCACCTACTAGAAGACCACCAGGTCGTCCAAAGATGAAGCAGAATGAATCATTAGAAGTAGTTAAACGTCAGCTCCAATGTAGCAAATGTAAAGGCCTTGGCCACAATAAGAAGACATGCAAAGATTCTTAGCTTCAATTTAGGAATTCCAAATAGGTAATTACTCGTTAACTTTGTTTCCCTAATTGTTAATATTTACTTGTTGCCATCTATGATCTATCTCATGCTTCAGCTATTTGAAATTTCTTTTAGTTGATTTCACATACTTCATTTCGCTGCTTCTTCCTACTCGTGGAGGGTTTTTTTTTTCCTCTTCTTTTTTTGAAGTTTTTAAATTTTTAAATTTTTTTTTTTTAATTTTTTTTAATCGTAGTTATTTTATAAATTGAATTAACAAGCTTGAGATAAAATGGAAGAATACAAAGGGAATGCAAAGACCAATCCCAAAAAGAGTCCAACTAACCTTAAAACGGACTCTAATCAAGCAAAATATGACCTAGAGGGTAATTTTAAAAAGATTTACAAACAGAAGCCTAGAGAGAGGTGTGAACTCTAACGAGAGAAGGGACCACTCCTCACTCTGAGGTCTCTCAAGCCCTCTAAAAGATCCCTTGTTTATTTCCCCTAATACCCATAAAATAGTACAGAAATCAGCGAACTACAAGAAATGACCCTTTTCCACAAGAAGGGGATGCACTTCTGGAAAAATTTCTTTTTCTAATACATTTAGTACAAATTATGTAGAACATTCCTCAGTGAATTATTGTTTTGTAGATCGCTTAATAGAATGTAGAAAAGTAAATGTTAGTATCTTGTCAATCTCTGGGGTTATTTTTGGATGGCTGCATCAAAACTTTATTGACAAGGCAATGAGGAGTTCGCATTTGGTGTGTAGGGAAAGTAGTCTTTTTCTTTTCGAAATGTAAAGTTATTTTGGGGAAGGTTTTGCAATCTTGTTTCAGAAAGCAGTAGAAACAAAGATTCAAGTCCTCCAAGATTTTCAAGTTGTTGTTGGGGTCGGTCTTCATTTTTTATATTTAGTGGGTGTTTTATGATGATTTCATTGAAAATGTTATTCCGGATTTTGGTTGGCCCTTCTTTAAAGCCAAAGTCTAAGTTGTTATTGCTGAAATTTTATTCAAAGAAATACAATTCATTGGATTGTTTGGGTCGTTTTCAAATTGCTTGGATTCTTGCTTCTTCTTGGTGCTCTCTTTCCTAGTCTTTTGCTGAATTTTCTATTCAAGATTTATGTTGAAATTGGAATACTCTTGTCTTCCTAGCTTAATCTTTTTATTTAGAAGGATGATGTTTCCTTGCATATGTATTTCTTTATATACTTGTTATCGTTTCCTTATACTTTGAGCTATAGTCTCTTTTCATTTCTTTAATAAACCGTTTCATTTTATTTATTTAATTTTTTTTTAATACAAAACAAAAACTTTTTCATTGAATTAATGAAATGAGTCTAATGCTCAAAGTAGCAACAAGAACAAAATAAAATCAAAGTGAAAGATATAAGAGACCAATCCACAAAGACAACACCCCAAGAACAAAAAAGCCAAATGAGCAAACTTCTAACAAAGTACAAGACTTTCATCTTGAGTGCCATAAAGCTTTAGAAGCAGAGAAGACTTGAGGATGAGCTCATGACCCAACAAAAAAAAAAAAAATGTTCTTGGCTTCGCTGGAAAGGGAAGTGGGATAATGGACCCTGCAGATGTTGTATACATGGGCTTCGCTACCTTTCTTTATCCAACTAACTCTGTTCAGATTGGGGTGTGGGTCTACCTTAAGTTGAAGGGTTTAAGTGACCTTTTTTACTCAAAATTCTCCTTGTTTTCATTGTATAGGATCACATTACAAATCTTACCGTTTATGCCGTACCTAGTTGATTGTGACTTTCTTGACTCTATGCTTAAGGTAAAAGGTTTTGGTTGTCTTTGGCGTTCTTAGATCAGAGGGTGCATCAGTAGTGCCAATTACTCCATCATTATTAATGGTCGTCCTCGTGGGAAGATTATTCCAACATGTGGTATCAAGTAGGGAAATCCACTTTCTCCATTCTTATTTATTTTAAACATCGTAATTATGCCCTTTTTGCAAAATGGACTTCGTGATTTTTATTTGAGTGAGATGCTTTATGGGCACATCTTATTATGGCTAAGTATTACTCTTCTTATTGCACTTGGCCTACTTCTATCTCTTGCGGCTCCTCCAAAGCTCCCTTGAGGTATATTTGGCAGTTCATTGGTTTGGTTGCTGCTCGTATTCGTCGTCGACTTGGTGACATGTATTATGTATATTAATCACAAGATCTATGCTAGAGGTTGTACAACTGTGTCCTTGAATTTCAATAAGATATGACATGTATTATGAATATTAATCACAAGATGGGGAATGTACAAAACGAGGGATGAGATATCCCGGAAAGCTAAGGGGATTACATAAAGGCCTCCTAATTCGGCGAAAATCTGTGAAAAGCCGTAGGTTATTAGTGAAAGTCATTTCTTAAAAAAGAAAGGAAGGAAGAAAAAGATGGATAATTATTCAACTTATGATAACTGTGTATGACACCCTTAAAGCCAATCTCATTCTCATCATTTTTGCTTTAACACAAAAAGTGCCTATGTAGAAAAATATTAGGATTATTAGTATTATTATTAGTAAGGACATATTAGTTAATAGCTAGTTAGTTTGTTAGGGCTTTTAATTACACATAGAGGGAATGGGGTTGGGAGAATGACGTGAAGAAATTGGTAGTAATTTCTACTGGAGAATTTGGAGAAGAGTAACCCCTCTTGAAAGGTTATGGTATATTATAGTTTCTTCAGTGATATTGTAATACATATTTCTATCCTTTACTTCTTTCTGTTTTTAATGTTTTCGAGAATTCTTGCCCAGAGGTATCCTAACAGTAACCTTTATGATGGGCACGGACAATGGAAATTTTGTTGAATGCTTCACTTTGCACCCCCATTATTCAACATTTTGTGTTATTTGATGGATAATTTGCTTGGCTGACATCATACTTATGGTGATTTATGTGCAAGTTAGAGTTTGTACCCGAGGTAAAAATTTTAAGGATTAGTAACATAGCTTTCCCAAATGAAGACATTTGGTTGGCTATGAGTTAAAAATGGGGAATTTACATGAAAAGTTGGAGGTTAGTCAAGTCTGATTGAAGCAGAATATACCCGAGTGGGTGTGGAATTTAGAAGGTCTGGGGGAGTTCTTGAGTATTGGAGATCTCTAATGAGGGAAGAAAATATTAGATTGTTATTAATTACTTAAATTAAGCAATTAGTTTTATCTGTTTGTTAGTTAGTATTTTAGATTTAGTGAGTTCTCTTACCGTTTTTGTTATGTCGGAGTAGAGGAGAGGTGCATGAATGATTCGACATCATAACTGAATGAGAGGGATCTTGAGAATATGAAATTATGATTAAGGAAGACATAAAAGAATTGATAACTTACGACCTATACTAACAAACAAAATGTACCTTCCTTTTCAGTGACTTAATTGTAGTAACTTAAGTGTGCTTGGCTTGAGAATTTTTTTAAGAAGTATGAAAGTGAGGATAAAGCATGTTGAAGGGACCCATGTTAGTTTGTGGGGATAGTCTTTTGCTAGGTACTTAAGCACCATGGAGAACCACACCCTAAAAGCTAGCTATTGAGATGAGAGAGCCAAGCCACTTAAGTACCATATTGGTCATCTCATTCTTACCAACGTGGGACAAAGGTAGCCCATATACTACTTTGGTTCCTAACACCTTCACACTTAGAAGTAGTTAAAGATAAGTAAGAATGACGTTGCCAGGTTGTAGGAATGCAAGAGAATGCTGGGACCAATAGGTGCCAAATTCGAATTTGGAATCCATGTCCAAGAGTCTTCTTTCAAATTCGAAGAGTTGCTCTTTTGTTTGGGTGAACTTTATGGTTGTTTGTGGGCATCAATGCCGTTGGCTCAAACCCGTTGCATGACTCGGTATACACGTCGATTTTGTTTTCCCTTTATATAAAATGTTAATACATTCTAGTTTCTAATATATATCCATATGTCATTCTCAAACGCTATATTCATGTATCCCAAATATTTATGAGGGCTTGGCACTACAAATATTGTTGTGTCCGTAGATTTTGGATTGTGATTCTTTTGCCAAATATCCAGTTTGTAACATTGATGATGAATTGGGCGTAGATTATGAAACTTCTATGGTGCCCCTTATCATTTAAAACATTCTTTAGCTTTTTGTGTAGAATCTGTTTCTGGCTCTTTTATTGTCAACTGATGGGTCATTTGAGATCTGTAAATTGGAAGGTGACTGAGGAGGAATATGTACATTGGTCCTATTCAGTTATGTCTATGAATTAATTGAGTGAAAAGTCATGATCATTGATGACTTACCTCCTCCCCTCCTGCATCAAACAAAGATGTAATTGCACACTTTTTTCCTTTTTGGAATTCGCTCGGAATGTTGTGGATGTAGAGAGAAGGGAAACTTATCAATATGGTCGATAGGTGTGAAGAAATGTGCTGAAGTATCTACTACAAGCCCCGCAACCAACAAAGAATTATTCGAGGAGGTTGGTATAGTGTGGTGGATGGTTTTATATCGATGAGAGAACTTAATAATTATACTTTACTCATACATCCAAGTATTTGAATGATGAAACTTCTTTGTTGTGATTATTAGGGACTTCGTCACATGCCAAATTTATTTTTTGAACAAATTCAATGAGGCCAAATATTCTATTTGTAAGTCGTACAATGCTTATCTTATGGTTATTATATTCAAAATTGCAAATATAGCAAAATCTATTGGTGATTCTATCGTCTTATAGATTTATAGCTCCAACAATATGGTATTTCACTTGCTATATTTGTAATTTTTTTAAAAAATATTGCTATACATTTAGTTATTATCCCTAAAATTGCTACTCATTACAATTTTTCAAAGAAAATTGTTGAAAAAGTAGTTTTATACATTTGAATGAAAAGAATCTACCAAAAAGAAAAATGAAAATAATAGAGATAAGTGGATTTTCAAATCTATTTATGGGATGGAATAGCTACATTATGACGGTTAATTTAGATGGGCAAAGTGGTGGTTTCATTTGGTGTGAAAATGAGGATGAAACATATTCATTGGTTTACTTATCAATATTAAAGAGAAATCATTATCTCCAACATCATATAAATATCTATGCAACTTAAGAAAAGATAAATAAACCTTTTGATCCCTAGAATTTGAAGAAGATATTTACTTGGTCAGTGAGGCATCATATGTAACATTTTGTCTCAAAAGTTGCAAAACGGTTCAAAATGGTCTCTAAATATATTTAAATGTTAGTTCATGATGGTTTAATTTGAGTTAAATTGTTGTTTGTAATTGTTTATTTGGTGAAAATATATCAATTTAATAATTATTTCCTTGCTGTTCCCATATTTCCTCTCTTTCTCCTTACGTTATCTCCCAACAACAATCAGTAGTCTCACTAATTGAAAGCCATTCTTTGTTTGGATCAAGAAATATTATTCTTCGTTTAAACACAAGAAGAACTTCCTCATTCCATGCAATTCCTCATCAACAACAATATTTATCTTCTGTCCACTCTTAGTATGAATGA

mRNA sequence

TCTCTCTCTCTCTCTCTCTCCTTTAAGCCCTTCAGTTAGCTTTGATACAACCAGAAACTTCAGGACCATTCACAGATATTAATGCAATAAATTTCCATCACCCTCTTCAGTTTACTCTCCCGGCGGAATGGCTAGCAGTGTGCAGAGGAGTCCTCGGTTGGATCAGATCCATGGCGAAATTCGCGACAGTTTTCGTGCCATTTCGTATACGAATACTCCTGCTAATAAGAGAGTAGAGCTGTTTGATGAGAGAGGCATTAATGAATCTACGACTGATGATAATGTTCAGATGACACCATCAATAATAAGTCAAGAACTGACCAATGTTGGGAAGAAGACAATGGATGAAAATGATCCTGCGATTGACAGCTCTAAAATGGTAGTTGAACAGACAGTTGAAATGGGAAGGCAATCTGCTTTTACATTGGAAGGCCAATATGAATGA

Coding sequence (CDS)

ATGGCTAGCAGTGTGCAGAGGAGTCCTCGGTTGGATCAGATCCATGGCGAAATTCGCGACAGTTTTCGTGCCATTTCGTATACGAATACTCCTGCTAATAAGAGAGTAGAGCTGTTTGATGAGAGAGGCATTAATGAATCTACGACTGATGATAATGTTCAGATGACACCATCAATAATAAGTCAAGAACTGACCAATGTTGGGAAGAAGACAATGGATGAAAATGATCCTGCGATTGACAGCTCTAAAATGGTAGTTGAACAGACAGTTGAAATGGGAAGGCAATCTGCTTTTACATTGGAAGGCCAATATGAATGA

Protein sequence

MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEGQYE

Homology

[Close]

BLAST of ClCG06G004180 vs. Swiss-Prot
Match: NPS12_ARATH (Novel plant SNARE 12 OS=Arabidopsis thaliana GN=NPSN12 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSK 85
           +Y NT  NK+VELFD   G++ E T ++NVQM  ++ +QEL + G K MDE D AI+ SK
Sbjct: 101 TYLNTLGNKKVELFDTGAGVSGEPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSK 160

Query: 86  MVVEQTVEMGRQSAFTLEGQ 104
            VV QT+E+G Q+A  L+GQ
Sbjct: 161 QVVHQTLEVGTQTASNLKGQ 180

HSP 2 Score: 38.9 bits (89), Expect = 4.1e-02
Identity = 17/26 (65.38%), Postives = 19/26 (73.08%), Query Frame = 1


Query: 1  MASSVQRSPRLDQIHGEIRDSFRAIS 27
          MAS +  SP L+QIHGEIRD FRA++
Sbjct: 1  MASELPMSPHLEQIHGEIRDHFRALA 26

[Close]

BLAST of ClCG06G004180 vs. Swiss-Prot
Match: NPS13_ARATH (Novel plant SNARE 13 OS=Arabidopsis thaliana GN=NPSN13 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.0e-13
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSK 85
           +Y +T  NK+VELFD   G++ E T ++NVQ+  S+ +QEL + G K MDE D AI+ SK
Sbjct: 101 TYMSTLGNKKVELFDMGAGVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSK 160

Query: 86  MVVEQTVEMGRQSAFTLEGQ 104
            VVEQT+E+G Q+A  L+GQ
Sbjct: 161 QVVEQTLEVGTQTAANLKGQ 180

HSP 2 Score: 39.7 bits (91), Expect = 2.4e-02
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1


Query: 1  MASSVQRSPRLDQIHGEIRDSFRAIS 27
          MAS++  SP+L+QIHGEIRD FRA++
Sbjct: 1  MASNLPMSPQLEQIHGEIRDHFRALA 26

[Close]

BLAST of ClCG06G004180 vs. Swiss-Prot
Match: NPS11_ARATH (Novel plant SNARE 11 OS=Arabidopsis thaliana GN=NPSN11 PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 7.2e-07
Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 1


Query: 33  NKRVELFDERGINESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSKMVVEQTVEM 92
           NKRV+LFD  G  E   ++NV +  ++ +QEL + G   MD+ D AI+  K +V++T+ +
Sbjct: 110 NKRVDLFD--GPGEEHMEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINV 169

Query: 93  GRQSAFTLEGQYE 106
           G  ++  L+ Q E
Sbjct: 170 GTDTSAALKAQTE 180

[Close]

BLAST of ClCG06G004180 vs. TrEMBL
Match: A0A0A0KCW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001720 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.5e-45
Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSPRLDQIHGEIRDSFR I YTNTPANKRVELFDERGINES+TDDNVQMTPSII
Sbjct: 1   MASSVQRSPRLDQIHGEIRDSFRPIPYTNTPANKRVELFDERGINESSTDDNVQMTPSII 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEGQ 104
           SQEL NVGKK MD++DPAI+SSKMVVEQT+EMGRQSAFTLEGQ
Sbjct: 61  SQELNNVGKKIMDDSDPAIESSKMVVEQTIEMGRQSAFTLEGQ 103

[Close]

BLAST of ClCG06G004180 vs. TrEMBL
Match: A0A0A0K9V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-16
Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 1


Query: 20  DSFRAI--SYTNTPANKRVELFDERGINESTTDDNVQMTPSIISQELTNVGKKTMDENDP 79
           +SF A+  +Y N+  NKRVELFDE G++E T DDNV+M  S+ +QEL + GKKTMDE D 
Sbjct: 93  NSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQ 152

Query: 80  AIDSSKMVVEQTVEMGRQSAFTLEGQ 104
           AI  ++ VVEQT+E+G Q+A  L+GQ
Sbjct: 153 AIQRTQKVVEQTIEVGTQTAAQLKGQ 178

[Close]

BLAST of ClCG06G004180 vs. TrEMBL
Match: A0A0A0K9V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 3.1e-01
Identity = 18/26 (69.23%), Postives = 25/26 (96.15%), Query Frame = 1


Query: 1  MASSVQRSPRLDQIHGEIRDSFRAIS 27
          MAS++Q +P+L+QIHGEIRD+FRA+S
Sbjct: 1  MASALQMTPQLEQIHGEIRDNFRALS 26

HSP 2 Score: 89.4 bits (220), Expect = 2.9e-15
Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISY---TNTPANKRVELFDERGINESTTDDNVQMTP 60
           MAS+   SPRL+QIHGEIRD FRA++Y   + +    R++L D+    E   ++NVQM  
Sbjct: 1   MASNRPMSPRLEQIHGEIRDHFRALAYGMVSKSWIRSRIQL-DKASSGEPAAEENVQMAS 60

Query: 61  SIISQELTNVGKKTMDENDPAIDSSKM-----VVEQTVEMGRQSAFTLEGQ 104
           S+ +QE  + G K MDE D AI+ SK      VVEQT+E+G Q+A  L+GQ
Sbjct: 61  SMSNQEFVDAGMKRMDETDQAIERSKQVSYRKVVEQTLEVGTQTAANLKGQ 110

[Close]

BLAST of ClCG06G004180 vs. TrEMBL
Match: A0A067G9P0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022587mg PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.0e-15
Identity = 45/79 (56.96%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGINESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSKM 85
           +Y N+  NK+VELFD   G++E T D+NVQ+  S+ +QEL + GKKTMDE D AI  S+M
Sbjct: 101 TYMNSLGNKKVELFDMGAGVSEPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQM 160

Query: 86  VVEQTVEMGRQSAFTLEGQ 104
           VVEQT+E+G Q+A TL+GQ
Sbjct: 161 VVEQTIEVGTQTATTLKGQ 179

[Close]

BLAST of ClCG06G004180 vs. TrEMBL
Match: A0A067G9P0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022587mg PE=4 SV=1)

HSP 1 Score: 42.4 bits (98), Expect = 4.1e-01
Identity = 18/26 (69.23%), Postives = 24/26 (92.31%), Query Frame = 1


Query: 1  MASSVQRSPRLDQIHGEIRDSFRAIS 27
          MA+ +Q SP+L+QIHGEIRD+FRA+S
Sbjct: 1  MATDLQMSPQLEQIHGEIRDNFRALS 26

HSP 2 Score: 88.6 bits (218), Expect = 5.0e-15
Identity = 45/79 (56.96%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGINESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSKM 85
           +Y N+  NK+VELFD   G++E T D+NVQ+  S+ +QEL + GKKTMDE D AI  S+M
Sbjct: 95  TYMNSLGNKKVELFDMGAGVSEPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQM 154

Query: 86  VVEQTVEMGRQSAFTLEGQ 104
           VVEQT+E+G Q+A TL+GQ
Sbjct: 155 VVEQTIEVGTQTATTLKGQ 173

[Close]

BLAST of ClCG06G004180 vs. TAIR10
Match: AT1G48240.1 (AT1G48240.1 novel plant snare 12)

HSP 1 Score: 76.6 bits (187), Expect = 9.9e-15
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSK 85
           +Y NT  NK+VELFD   G++ E T ++NVQM  ++ +QEL + G K MDE D AI+ SK
Sbjct: 101 TYLNTLGNKKVELFDTGAGVSGEPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSK 160

Query: 86  MVVEQTVEMGRQSAFTLEGQ 104
            VV QT+E+G Q+A  L+GQ
Sbjct: 161 QVVHQTLEVGTQTASNLKGQ 180

HSP 2 Score: 38.9 bits (89), Expect = 2.3e-03
Identity = 17/26 (65.38%), Postives = 19/26 (73.08%), Query Frame = 1


Query: 1  MASSVQRSPRLDQIHGEIRDSFRAIS 27
          MAS +  SP L+QIHGEIRD FRA++
Sbjct: 1  MASELPMSPHLEQIHGEIRDHFRALA 26

[Close]

BLAST of ClCG06G004180 vs. TAIR10
Match: AT3G17440.1 (AT3G17440.1 novel plant snare 13)

HSP 1 Score: 75.9 bits (185), Expect = 1.7e-14
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSK 85
           +Y +T  NK+VELFD   G++ E T ++NVQ+  S+ +QEL + G K MDE D AI+ SK
Sbjct: 101 TYMSTLGNKKVELFDMGAGVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSK 160

Query: 86  MVVEQTVEMGRQSAFTLEGQ 104
            VVEQT+E+G Q+A  L+GQ
Sbjct: 161 QVVEQTLEVGTQTAANLKGQ 180

HSP 2 Score: 39.7 bits (91), Expect = 1.3e-03
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1


Query: 1  MASSVQRSPRLDQIHGEIRDSFRAIS 27
          MAS++  SP+L+QIHGEIRD FRA++
Sbjct: 1  MASNLPMSPQLEQIHGEIRDHFRALA 26

[Close]

BLAST of ClCG06G004180 vs. TAIR10
Match: AT2G35190.1 (AT2G35190.1 novel plant snare 11)

HSP 1 Score: 54.7 bits (130), Expect = 4.0e-08
Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 1


Query: 33  NKRVELFDERGINESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSKMVVEQTVEM 92
           NKRV+LFD  G  E   ++NV +  ++ +QEL + G   MD+ D AI+  K +V++T+ +
Sbjct: 110 NKRVDLFD--GPGEEHMEENVLLASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINV 169

Query: 93  GRQSAFTLEGQYE 106
           G  ++  L+ Q E
Sbjct: 170 GTDTSAALKAQTE 180

[Close]

BLAST of ClCG06G004180 vs. NCBI nr
Match: gi|449441646|ref|XP_004138593.1| (PREDICTED: uncharacterized protein LOC101203713 isoform X1 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 5.1e-45
Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSPRLDQIHGEIRDSFR I YTNTPANKRVELFDERGINES+TDDNVQMTPSII
Sbjct: 1   MASSVQRSPRLDQIHGEIRDSFRPIPYTNTPANKRVELFDERGINESSTDDNVQMTPSII 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEGQ 104
           SQEL NVGKK MD++DPAI+SSKMVVEQT+EMGRQSAFTLEGQ
Sbjct: 61  SQELNNVGKKIMDDSDPAIESSKMVVEQTIEMGRQSAFTLEGQ 103

[Close]

BLAST of ClCG06G004180 vs. NCBI nr
Match: gi|659116834|ref|XP_008458283.1| (PREDICTED: uncharacterized protein LOC103497748 isoform X1 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-44
Identity = 94/103 (91.26%), Postives = 98/103 (95.15%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSP+LDQIHGEIRDSFRAI YTNTPANKRVELFDERGINESTTDDNVQMT SI 
Sbjct: 1   MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSIT 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEGQ 104
           SQEL NVGKK MD++DPAIDSSKMVVEQT+EMGRQSAFTLEGQ
Sbjct: 61  SQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ 103

[Close]

BLAST of ClCG06G004180 vs. NCBI nr
Match: gi|778709007|ref|XP_011656330.1| (PREDICTED: uncharacterized protein LOC101203713 isoform X2 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 1.9e-44
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSPRLDQIHGEIRDSFR I YTNTPANKRVELFDERGINES+TDDNVQMTPSII
Sbjct: 1   MASSVQRSPRLDQIHGEIRDSFRPIPYTNTPANKRVELFDERGINESSTDDNVQMTPSII 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEG 103
           SQEL NVGKK MD++DPAI+SSKMVVEQT+EMGRQSAFTLEG
Sbjct: 61  SQELNNVGKKIMDDSDPAIESSKMVVEQTIEMGRQSAFTLEG 102

[Close]

BLAST of ClCG06G004180 vs. NCBI nr
Match: gi|659116836|ref|XP_008458284.1| (PREDICTED: uncharacterized protein LOC103497748 isoform X2 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 5.6e-44
Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSP+LDQIHGEIRDSFRAI YTNTPANKRVELFDERGINESTTDDNVQMT SI 
Sbjct: 1   MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSIT 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEG 103
           SQEL NVGKK MD++DPAIDSSKMVVEQT+EMGRQSAFTLEG
Sbjct: 61  SQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEG 102

[Close]

BLAST of ClCG06G004180 vs. NCBI nr
Match: gi|449441500|ref|XP_004138520.1| (PREDICTED: novel plant SNARE 13 isoform X1 [Cucumis sativus])

HSP 1 Score: 93.6 bits (231), Expect = 2.2e-16
Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 1


Query: 20  DSFRAI--SYTNTPANKRVELFDERGINESTTDDNVQMTPSIISQELTNVGKKTMDENDP 79
           +SF A+  +Y N+  NKRVELFDE G++E T DDNV+M  S+ +QEL + GKKTMDE D 
Sbjct: 93  NSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQ 152

Query: 80  AIDSSKMVVEQTVEMGRQSAFTLEGQ 104
           AI  ++ VVEQT+E+G Q+A  L+GQ
Sbjct: 153 AIQRTQKVVEQTIEVGTQTAAQLKGQ 178

The following BLAST results are available for this feature:

BLAST of ClCG06G004180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NPS12_ARATH	1.8e-13	51.25	Novel plant SNARE 12 OS=Arabidopsis thaliana GN=NPSN12 PE=2 SV=1	[more]
NPS13_ARATH	3.0e-13	51.25	Novel plant SNARE 13 OS=Arabidopsis thaliana GN=NPSN13 PE=1 SV=1	[more]
NPS11_ARATH	7.2e-07	36.99	Novel plant SNARE 11 OS=Arabidopsis thaliana GN=NPSN11 PE=1 SV=2	[more]

BLAST of ClCG06G004180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCW9_CUCSA	3.5e-45	91.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001720 PE=4 SV=1	[more]
A0A0A0K9V5_CUCSA	1.5e-16	55.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1	[more]
A0A0A0K9V5_CUCSA	3.1e-01	69.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1	[more]
A0A067G9P0_CITSI	5.0e-15	56.96	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022587mg PE=4 SV=1	[more]
A0A067G9P0_CITSI	4.1e-01	69.23	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022587mg PE=4 SV=1	[more]

BLAST of ClCG06G004180 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48240.1	9.9e-15	51.25	novel plant snare 12	[more]
AT3G17440.1	1.7e-14	51.25	novel plant snare 13	[more]
AT2G35190.1	4.0e-08	36.99	novel plant snare 11	[more]

BLAST of ClCG06G004180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441646\|ref\|XP_004138593.1\|	5.1e-45	91.26	PREDICTED: uncharacterized protein LOC101203713 isoform X1 [Cucumis sativus]	[more]
gi\|659116834\|ref\|XP_008458283.1\|	1.5e-44	91.26	PREDICTED: uncharacterized protein LOC103497748 isoform X1 [Cucumis melo]	[more]
gi\|778709007\|ref\|XP_011656330.1\|	1.9e-44	91.18	PREDICTED: uncharacterized protein LOC101203713 isoform X2 [Cucumis sativus]	[more]
gi\|659116836\|ref\|XP_008458284.1\|	5.6e-44	91.18	PREDICTED: uncharacterized protein LOC103497748 isoform X2 [Cucumis melo]	[more]
gi\|449441500\|ref\|XP_004138520.1\|	2.2e-16	55.81	PREDICTED: novel plant SNARE 13 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007165	signal transduction
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G004180.1	ClCG06G004180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 33..105 score: 8.8
None	No IPR available	PANTHER	PTHR21230:SF35	SUBFAMILY NOT NAMED	coord: 33..105 score: 8.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G004180	Cla009207	Watermelon (97103) v1	wcgwmB344
ClCG06G004180	Cla97C06G113600	Watermelon (97103) v2	wcgwmbB273
ClCG06G004180	CmaCh08G013090	Cucurbita maxima (Rimu)	cmawcgB804
ClCG06G004180	CmaCh17G003990	Cucurbita maxima (Rimu)	cmawcgB328
ClCG06G004180	CmoCh17G003900	Cucurbita moschata (Rifu)	cmowcgB325
ClCG06G004180	Lsi09G015270	Bottle gourd (USVL1VR-Ls)	lsiwcgB029
ClCG06G004180	MELO3C021229.2	Melon (DHL92) v3.6.1	medwcgB119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G004180	Silver-seed gourd	carwcgB0073
ClCG06G004180	Cucumber (Chinese Long) v3	cucwcgB502
ClCG06G004180	Wax gourd	wcgwgoB501
ClCG06G004180	Cucumber (Gy14) v1	cgywcgB228
ClCG06G004180	Wild cucumber (PI 183967)	cpiwcgB507
ClCG06G004180	Cucumber (Chinese Long) v2	cuwcgB480
ClCG06G004180	Melon (DHL92) v3.5.1	mewcgB124
ClCG06G004180	Cucurbita pepo (Zucchini)	cpewcgB144
ClCG06G004180	Cucurbita pepo (Zucchini)	cpewcgB297
ClCG06G004180	Cucumber (Gy14) v2	cgybwcgB443