Cla009207 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla009207
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Novel plant SNARE 13 (AHRD V1 -- F4J563_ARATH)
Location	Chr6 : 4508975 .. 4517961 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCAGTGTGCAGAGGAGTCCTCGGTTGGATCAGATCCATGGCGAAATTCGCGACAGTTTTCGTGCCATTTCGTATGTTCTTTAACCACGCCCTCTCTATTTAGTGATTGTTTCTGCTTATATTGCCATGTTGTTGTATATATGCATTAAACGCTTCCAATGACAATGGTTGGTGTCTCGGGTAATGATCAATTTTTATGTTCGGGGACCCTTCAAGCCTTTTGATTCTGTTTCGTCTCTTACACCTTCGTTGAAGTGTGGTTTTGTGGATTAGTAGACATTTTTTTTCCCTGTTAAAATAATGTTTACGAAAAACTATTCCATTGACCCAATGGAAGGGAGAAGAAGACCCCATTCCAACAATGGAATTTAAGAAAGACGTCTGGTTAGCGCATTCGTTTGTTAGGCTAGGTCAGTGGACCTCATTTTAAACATCTGCATTGATAAATGGCGATGTAGTGTCTTTTAGGAATTTTTTTTTTCCCTTTCTGTTTGTATTCTTTGGGAGTTAGTTATTGACTTCTTATTTAAAGACTTCCTTAGTTATTTATTTTTACCTTTTGTTAACTTTTACCTTTTGGTAATGGTTTAATTTTAAGAGATGTAACTTTTCTTCAGCTTCTATTTTATTTCTTTACCTTCGGTTAATAAGGTCAAGTTAGTTTGTATTCTCAGTTTTCAGCCTATACATAAGGCTAATTACTTTCAGTTGAAGGTAATAAGAAGTTAATCATTTCTTTGAGAATTTTGTCCTCACCAAATGAAATGACCACCAAAGGTGCATTGTAAAAATGATCTTCAATCATGAAGAAAGACTATCTTTGAAAGGGTGTGCATAGTGCATAGGTTGACTGGGGGCATCATAAACTAATTAAATGTTTTTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAATCTAATTAAAGGCTGTTTGGAAGTGTACCCAAATCCTTTTTGAGTTTTTGAAAAAGACAGTGTATGAAGATACTCCAAGTTAATGGTGGGAGCAGATTGGTTGGGCACTTTAATAAGAGAGTTGAAGAATTTCCATCCCTTCTTTTCTTTTCCCACACGAATGATGACTTTGTTAAGGCCCCCACTGATGCAGAGCTTAATGACTTCAGCACAATGACCCTTTCAGCTGGTGGTCTTTTCAACCCAGAGATCATATTTGTCAAGATGACATTTTTGGAAGAATTGTTGGTTGAGGAGGGCGTCGATCAAAACATTGAAACAAGAAGAAATCCAAGATCAAGATTTTTTCTTCAAAGATGAATGGTTGATCTTTCCATGCCTCGGTGATGCGAAAGCCATGGTCAATCTCAATGGTGGAAGTCTTGTTGTTGAGGGTGAAGGAGGGAAGGGGGGAGGCAGAACGGCGGGACATGCCGTGGGAAGAATGGTTAGAGATGGAGAATGGTGGATGAGGGGGATGGAGAGGATTTCATTGGGGAGAGGGCGCCTTTCCTCTTTATGATTGTATATACATAATATTGAAAATTTGAGTTTTATTGTTTAATAACTTGGATATGTTCAAACTATAAAATTGAACACTTGGACTATGTATGTCGACGATTAGATAATTTGATAGGTTGGTTATTTTGTTAATGTTAGCAGCTTTAACAAATTTATCTTTAAATGAAAATTCTCCATGTGAAATTTACCATTTAAATGATTTTTTAGTGAAACACGCTGTGTATAATTAAAATAACTTAAAATAAAATTTGTTAAATAATAGAATTTGAATGAGAACTATGGATATCCTTGCTTGTGGATATCTAATTGTTCATTTATATTCATGGATTTATGGATGTAGCCTCTCTATCTCTGTAATTACACCTTTTTTTGTGTGATTAAACTTGGTTTGCAAGGTCTAACATGGTCAGTGATCAAAGCATTTGAGAATTGAATTGCTTGAAATGTGAGTTTCTCATGTTTTATAGCTGGAACACAGGTATACGAATACTCCTGCTAATAAGAGAGTAGAGCTGTTTGATGAGAGAGGCATTAATGAATCTACGACTGATGATAATGTTCAGATGACACCATGTAAGACTTTATATACTGTGAAATCCATAAGCTTGTAGCTAAATATGTCCCTTTTGGAGGAGTTTCTACCCTTGGAACCTTTAGGGCCTTCTATTTTTGAATTTGGAATTTTTGTTTTAGAACTCTTTGTCTCCTAGTATTACCAATCTCAAGTCGAAATACCATTGAAGGATCTCCAACTTCGTTTCCATCTATTACTCTTTTCTTATTGGCCTGAATGTTCTATTGCTTTGCTTTACACATTTTTTAACTTAAAATAATTAATTAGTTGTTTCCCGTTTCAACCTATTGATGTGATTTGTTCACAATAACTATGCATTTTTATTTACAATAATATTTCTTCAGTTTTGATATGTTCAGCGTGATATAAATCTCATGATATAATAAACTTGAGTTGAAGGAACCATAATTTTGTTCCCTATTTTATAATAAGTAGATTAAAGGATAGGTTTGCATTGCAATCCCGGGCTTGAGGATGTGACAATTGAAATATAAGTAAAAAGAAACAGTGGCTTTGGTTCCAAATTTCAATCTTCCAGATGTGTTCAAGTAATAAATATTAAATATGGTTTATTGTGGAGGGGTGAATTTCTATATTGTCTATAGGGCAGAAGGAAGAAATAGTATGATCATACTTGTAGGAACTATGCTTTCTTTGAGTTTTTTGATGTATATGTGAGTGTTGAAAAGTGAGAGACTTTTTAAGTATCCTCTTTTCTTCTATATATTTCACATTCTAGTGGCATGTCTTTGTGCTGTAGCAATAATAAGTCAAGAACTGACCAATGTTGGGAAGAAGACAATGGATGAAAATGATCCTGCGATTGACAGCTCTAAAATGGTGACCAGTTTTTTATAATGCACATGCTTTCTCATTTTGTTTAGGTTTTGTTTTGTTTTTTGTTTTTTGTTTTTGTTTTTACTGTTATTCCTAATGCAAAATATGATCTTTAGGTAGTTGAACAGACAGTTGAAATGGGAAGGCAATCTGCTTTTACATTGGAAGGCCAAGTAAGTATATAAATTCACGATTCTCTTAAAAAGAAGTATTCAATTGGTTTAGCTCTATTCACTAGAATCTTTTTGGTGTTTTTGTTTTATGACTTGGCAATTGTTCTCACAATGCAATGCGTTACGTCTAGTGGACGTTATCAAGTTTAAGTTGGTAGATTACAATAAATTTAATTATATAAGTATACTTCAACACACCTCCTCACTTGTGGGCTTGAAGATGGTCTAGCAAGTGAAAATCAATAAGAAAAAGGACAACAAGTGCATTTGATGTAAAACTACAAATCACTAGTAAGGAAAAGAAGGATAACAAGCGCATTTGATGTAGTAAGATTAGAGTAAGGGTATCTTGGTCAAATCTTTAATTGATTAGGATAAGGATCGGTTCCTCGATTGATTAGGATTTGGATTAGTTTCTTTGGTTTATTAGGATTTGGATTACTTGGCTTTCCAGTTCTCTATAAATTGAAGAACTGTCTTCCTGTATTGATAACTTTGGATTCATAAGATTTCGATTTTTTCTGGGAGATTTCTCTCCTTTTATCTTTTAGGCTACATTGGTCGTTAGATAAATCGAGGAAAGAGTTTAGTCATTGGTTTTAATTGTGATCCATCTAAGGCTTCAAGATGGGCCATGATGGCTGCTCGTAATGTAGGAGAATTTCTCACGATTGAGTACTTTGGCCATATTGTATCAGACCAAGGAGTCTTAGCTCAGCCATTGAAAAATGAGGTAATGGTGCAATGGCGAAAGATGTAATTGTCTTTAGAGTAATATAGCGCAAGATGTCTTTGATAAACCTAAAAAAAGCAATGACTACTGTTCCAGTATTGGGCCTTCCAAATTTCTCTAAACAACCCATCAGGGAATCGAATGCTTTTGGAGTTGGTTTGTGTGTGTGTACTGTGCTAATTTAAGACCAACAACATCTAGTATTTTACTTATTATTTATTTTTTTGTTATGCTTTACCTTTTGTCCATTGACATGAGGCTATTCATTATGAGTGTGAGTTAATGGCGATTGTTATGGCAGTGCAAAAATAGAGACCACACCTCCAAAGTCAGAAGTTTGTAGGCCGTACGGATCAAAAGGCTTTGAAGTTTTTGCTTGGTGAAAGGGTAATAGCAGTTGAATACCAACATTGGATAACAAAGCTCCTAGGGCATGATTTTGACATTCAAAACAAAGTCAAATTAGACAATAAAGTCGTAGATGATCCAGGCTTCCCCCTAAGATTGCTTTAACAATTTGAGTATACTGGCAGGAACTAATGTGACCGTCATTGTCAATCAGATCAAACAAGATGAGGAACTCTCCAAAGTAGTGGAGGTATAGAAGAAGGGTGATAATCCACTAGAGGGATACAACCTCAGAGGGGACTTGTTATATTTTCGAGGATGTCTGGTATTACCCCAAATTCTCTGCCAATTCCTTTACTCTTGTAGGACTATTAAATGACTTGTTGGGTTGGTCAAGACTAAACAGAGGATTGCCAAAGAAATCCATTGGAGTCTTGTATCCTTGAGCAGTAGTTTTTTTCATTTCTTGAATGGAAAGTTTTGTATATTGTTAAAAAAAGGATGGCCAAAGAAATCTACTGGCGAGGAATGGAAAGGAGGATCCAGTCCTTTATTAACAATTGTGCAGTATGCCAACCATTAGCTTCAGTTGATTTTTTAAAATGTCATCCAATACTTGCTAGAATATGGGAAGGAAAGATTATAAAATGTACACAGAATATAGAAAGAGACAATCTTAACAATTCCTAAAGCATAGCTGAATCAATTAATCTTGATTTTCTACTGAATAGGATGAGGAATCTCTTCACACTTTCTTGAAATAATGATACTAAATCATCACTAAAAGAATCTTGTGCACTAGTATCATGAATATTATCTTTTATAAACTTAATGGTAGAACACTACTCAAACTAACTTCAGATGCAACATCACCATCATCAACATTATGTGAAGGGGAAAAAGAAGCAGTGTCATCCTTTGAAGAATGAAATACTCCTTTAGTGAAAACATAATCAGAATTTACTACAGTAAATTTTTGTCGACCGCTATTACGAGATATGTCTTTCTTGACAGATGGAGCCAAAAGACTAGAAACATTTCCTTCATCACAATTTGGATTCAAAGTATTATCCTCAATTAATGGAGGACCAAAGAGTGATGCCACTTTTCTTCAAGTATAGTATTGGAGATAGCTGCAATAAAACAATTATTTACCTCTTGATTGCTTAGGGACTTAGAAGATTCAAGCTCCTTAAAGGGAATCAACAAAAGGCATCACGTTAATGACCACAATAGGCATCTTTGTTATCCTTTGGAGCATGCAAAAAATCTAGTAAATCATCAAAAGGTGAACAACCACGCTGAGAAGACTTTTCATCTTCAATTACTAAGCTACGGATTTGAAAAACCTTTTAGATCCAAAGTGCTTGTATAAGAGTCATAAGACATAGAAGAAACATCAATTGTAGTGGTATCTGCAAATCAAAGGAAATTTTTTTCCCTCTTTGCATCCTTATTTTCAATTGCAGCAGGGATGAAACTACAAAGTTCTTTCGAAATTTAATATAAGATGCACTACAATCTAACAAATTTAGGATCTTTGTTGTCCTTTGGGCATTCACTCATCCAGCTCTTTGTTTTGTGCTCTTCAGTGGGACTTATTGTTATATCTATTTTTACTTTTGTTTTTGCTACTGTAGCTATCTTTGCTTGTATAGTAAAGTTGTCCAATGATGTACTGGTTGTATTTCATTTCTGCTACTAGGTGATGAGGATATATTTAATTGGATATGATGTGGGTGCTAAGGGGGTGTCAACTTAGTTGAGATTCGTGGGTGCACCTCCTAAACCTTAGGTCTCTTTTTTGTCATAGTACATATTTTGTACTTTCAGCATTAGTCTCATTTCATTACATCAATGAAGAGGCTTGTTTCCATTTTAAAAAAATGCACATTCAACTGAGAACCACTGACAAAGAATTCCAATTTAAATGAACAACTTCTTTATCTTTTGTTATCCAAAGAGAGGATTTGGAGATGGAGGGCTTTGGACAAAATAAGCCTGTAACCGATGGAAGAGAAGGTGGGATGAATGAATCCACAATATCTATATAAGAATTAGGACTGCACTTCAAAGATTGAGAATCTTTCAAGCCAAGCTTCTAAAAAATTCCATGATAAAGTTTCTAAACATATCCCAAAAAGTAAACCGACCATGCTTTAAGAAACCACAAGAAATACTAATCACATTTCTTCCACCGGATATGGGCCGCACAATACAATAAAAAATTGACCTTGAAGGAAACCAATAGTTCTGAATTCTGGTTTTCTTTAGGGTCACATCTCATATATGGGCCGCATCTTGGATATGGTTTGAGAAATCTATGGTTGAAATGATGCTTTGACTCTACATCTCATATTTTCTCCAAGCAATATAGAGATGGAGGTGGCTGATTGGTAACATAAGAAAAATGAGTGAAACAAGGTAAGTATGCTCTCTCCTCTTTCTTCTCTCCTCCTTCCCCTTTCCCTTCTCTTCTCCTCCTTGTTAGATCAGTAGCTCCAGTCCGCTTCATTTCTTCCTATTCATCTTTCTTGTCAACCATTCTTCTCTGAAGTATGAAAGTGAATAGTTGTAACATGAATGGGTTCTATTTCTCTATTTGGCATGATTCTGGTTCTTTTTACGTGGAAGACTTGGAAGTCAACAAGTTCCTTCTCCTCTCGAAATCTTAGATCAATTGGTTTGTTGAAAATATTTTAGAAATGATCAAGGTGTTTGCTTCATGCTTCTTTGCGAGGAGCGGCCGTGATGGTTCGGGTGCCACAAATTTGTCTAAGTTCCATGGCTCCTTAGGATGGATTATGAGATGCGTTGTTTGGCCTTCTTCGGGAGTAGATACTTTATTCATATCCCTTTCGGAGAATCGATGCAAGGTTGGTATTCTTTTGCGATAATGCTCCTAGAATTTCAGAAAGACTTTGAAGCTTCTGTAAGCCATTTTTTTTGAGAAGGGAGTCAACAAATACCGTTTGGCCAAACCAGGGAGGAGATTACATGGACATTGTGAAGCCTCCGAATGTTCATCAAAGCTCAGCTTCCCCTTCGAGGAAACAGAGCATGGAAACAACATCTGTTCCTTGTCTGAAGCAAGGCCCTGTTTTAGTACTCGATAAACAGAGTAAGATCATTATTGGGGGATAAGGAATTTTGACGTTTTTCAAGAAGATTTTAGCAATTTGTGGATAGTTTCCAGAATGTTTGAGTTCAATGACTGGTCGGAAATAGCTAAAACATTAAAAAAATCACTTTCACTCTGATGTCATTGTCAATCCTTTGTTTGCAAAAAATGTCTTAATTAAACTGGACCAAGGAACTCTTGAGGAGTTGATTGAGGCACCGTGCAAATGGTAGAGTTTTGGATCGTTTTATCTGAAGTTTGAGAAGTGGAACAAGTCTGTGCATAGCTGGCCATTGTATTTGAAAGGTTATGGATGATGGATCTCAATTAAGAATCTCCCGTTAGACTATTGTTGTAGACAAACTTTTGAAACTATTGGTGCCTCTTTTGGAGGTCTAGAAGATATTGCTTCGGATACTTTGAACCTCCTTAACGTTTTTGAAACTAAGATTCAAGTTAAAAAGAATTTATGTGGTTTCATGCCATCAACCATAGAAGTTGCGGATGAAAAGCGTGGTTTTATATTTTTGAATTTTGGAGACATTGAATTAATTGAACCTCCCTCAAGGGTGAAAGGTGACCTATTTGTCAAGGATTTTACTAATCCAATTGATTTAGTTCGTTTGAATTAAGTTTTACAGGATGGAAGATTATGGTTTGAATCTTTAGATCCTGATTTGGAATTTCTGTTACCATCTTAGTCATCCTTAAATTATTCAAGAAATCCATTAGCTTCAAGAATAAAGTGGAGAAACTCCTCATTGCAAAAGCCAATGGAAGTTGGTCATTTGGCTTCAATCAAACCAGATTCCATTCCACTGCAGCTAGAGAAGACAAGAGGGAATCCTTCTAAGTTTGATGTGAACGCATAATTTCCTTTATTGAAGAGTGAGAAAGTCGTTAGGGATATAGCTGTTAACAAAACAAAGACCCTCAATATCCCTTCGAAAGAATTTCAAATTTTTGCCGTCGAGAGTGTTGATGTCTCAGTCGATTCACTTTCCAAGATTTTCAGCCCCACGCTTGAAGTTGTTTCAAGCCTGTTCGTTTCCCCCACCAATGAAGTCTCACTTTTAAAGGATAGAGCTGTCGGTTCCTTCTTCATTGAAAAAGAAGTAAATGCTAGCGCAAATATTCTCTCTCCTAAAATTCCAAAAGACAGCAACCCTTTTCAATTAGTTGTCCCTTCTCTAGTGTTCCACTGCAAAAGTAAGTTTGATTCTTCTCCCCCAGCGTGCGACTCTCATTAGTTGAAACCAAAGAAGCGTTCAAAATTACTCAAGCCTTCCCCCAAACATTTTGTTAGGAAAAAGACTTCGTTTCTAAACTCTTGGCCTATGATTGTGAACTCGGATTTGCTTGAGGAATGCTGCGTCAAAGTTCAAATCCCAGGGCTTATTCCTGAAAGTAAATTTTGTGAGAGGACTCCCGGCTAGTCTTTCAAGCAACTATCATCGCAAAAAACAAGATTCAAGGAATTGGATGGGGTTTCATTAGCAAGTGCTAGTAGTGAAGAGTTTGAAAATTCTGTAATAGAGGAATTACGAGATAAAGAAGAGTTATTTGATGGGTTTGGTAATGACATTTGTCATTTATTTCAATCAGAGAAAGCTCATAGGTTTGGTAAGGCTAAAGACTCTTTATTTTCTCATCTTGAAAAGAGTGAAACTCCACAACATCTACATTCTATAATTGATGCTTGTGGTATCGTTCTTGGTTGA

mRNA sequence

ATGGCTAGCAGTGTGCAGAGGAGTCCTCGGTTGGATCAGATCCATGGCGAAATTCGCGACAGTTTTCGTGCCATTTCGTATACGAATACTCCTGCTAATAAGAGAGTAGAGCTGTTTGATGAGAGAGGCATTAATGAATCTACGACTGATGATAATGTTCAGATGACACCATCAATAATAAGTCAAGAACTGACCAATGTTGGGAAGAAGACAATGGATGAAAATGATCCTGCGATTGACAGCTCTAAAATGGTAGTTGAACAGACAGTTGAAATGGGAAGGCAATCTGCTTTTACATTGGAAGGCCAATCAACAAATACCGTTTGGCCAAACCAGGGAGGAGATTACATGGACATTGTGAAGCCTCCGAATGTTCATCAAAGCTCAGCTTCCCCTTCGAGGAAACAGAGCATGGAAACAACATCTGTTCCTTGTCTGAAGCAAGGCCCTGTTTTAGTACTCGATAAACAGAAGAAAGCTCATAGGTTTGGTAAGGCTAAAGACTCTTTATTTTCTCATCTTGAAAAGAGTGAAACTCCACAACATCTACATTCTATAATTGATGCTTGTGGTATCGTTCTTGGTTGA

Coding sequence (CDS)

ATGGCTAGCAGTGTGCAGAGGAGTCCTCGGTTGGATCAGATCCATGGCGAAATTCGCGACAGTTTTCGTGCCATTTCGTATACGAATACTCCTGCTAATAAGAGAGTAGAGCTGTTTGATGAGAGAGGCATTAATGAATCTACGACTGATGATAATGTTCAGATGACACCATCAATAATAAGTCAAGAACTGACCAATGTTGGGAAGAAGACAATGGATGAAAATGATCCTGCGATTGACAGCTCTAAAATGGTAGTTGAACAGACAGTTGAAATGGGAAGGCAATCTGCTTTTACATTGGAAGGCCAATCAACAAATACCGTTTGGCCAAACCAGGGAGGAGATTACATGGACATTGTGAAGCCTCCGAATGTTCATCAAAGCTCAGCTTCCCCTTCGAGGAAACAGAGCATGGAAACAACATCTGTTCCTTGTCTGAAGCAAGGCCCTGTTTTAGTACTCGATAAACAGAAGAAAGCTCATAGGTTTGGTAAGGCTAAAGACTCTTTATTTTCTCATCTTGAAAAGAGTGAAACTCCACAACATCTACATTCTATAATTGATGCTTGTGGTATCGTTCTTGGTTGA

Protein sequence

MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEGQSTNTVWPNQGGDYMDIVKPPNVHQSSASPSRKQSMETTSVPCLKQGPVLVLDKQKKAHRFGKAKDSLFSHLEKSETPQHLHSIIDACGIVLG

Homology

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BLAST of Cla009207 vs. Swiss-Prot
Match: NPS12_ARATH (Novel plant SNARE 12 OS=Arabidopsis thaliana GN=NPSN12 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-13
Identity = 41/81 (50.62%), Postives = 55/81 (67.90%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSK 85
           +Y NT  NK+VELFD   G++ E T ++NVQM  ++ +QEL + G K MDE D AI+ SK
Sbjct: 101 TYLNTLGNKKVELFDTGAGVSGEPTAEENVQMASTMSNQELVDAGMKRMDETDQAIERSK 160

Query: 86  MVVEQTVEMGRQSAFTLEGQS 105
            VV QT+E+G Q+A  L+GQ+
Sbjct: 161 QVVHQTLEVGTQTASNLKGQT 181

HSP 2 Score: 38.9 bits (89), Expect = 7.5e-02
Identity = 17/26 (65.38%), Postives = 19/26 (73.08%), Query Frame = 1


Query: 1  MASSVQRSPRLDQIHGEIRDSFRAIS 27
          MAS +  SP L+QIHGEIRD FRA++
Sbjct: 1  MASELPMSPHLEQIHGEIRDHFRALA 26

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BLAST of Cla009207 vs. Swiss-Prot
Match: NPS13_ARATH (Novel plant SNARE 13 OS=Arabidopsis thaliana GN=NPSN13 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-13
Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSK 85
           +Y +T  NK+VELFD   G++ E T ++NVQ+  S+ +QEL + G K MDE D AI+ SK
Sbjct: 101 TYMSTLGNKKVELFDMGAGVSGEPTAEENVQVASSMSNQELVDAGMKRMDETDQAIERSK 160

Query: 86  MVVEQTVEMGRQSAFTLEGQS 105
            VVEQT+E+G Q+A  L+GQ+
Sbjct: 161 QVVEQTLEVGTQTAANLKGQT 181

HSP 2 Score: 39.7 bits (91), Expect = 4.4e-02
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1


Query: 1  MASSVQRSPRLDQIHGEIRDSFRAIS 27
          MAS++  SP+L+QIHGEIRD FRA++
Sbjct: 1  MASNLPMSPQLEQIHGEIRDHFRALA 26

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BLAST of Cla009207 vs. TrEMBL
Match: A0A0A0KCW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001720 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 5.9e-46
Identity = 96/107 (89.72%), Postives = 102/107 (95.33%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSPRLDQIHGEIRDSFR I YTNTPANKRVELFDERGINES+TDDNVQMTPSII
Sbjct: 1   MASSVQRSPRLDQIHGEIRDSFRPIPYTNTPANKRVELFDERGINESSTDDNVQMTPSII 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEGQSTNT 108
           SQEL NVGKK MD++DPAI+SSKMVVEQT+EMGRQSAFTLEGQ+T T
Sbjct: 61  SQELNNVGKKIMDDSDPAIESSKMVVEQTIEMGRQSAFTLEGQATAT 107

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BLAST of Cla009207 vs. TrEMBL
Match: A0A0A0K9V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-16
Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 20  DSFRAI--SYTNTPANKRVELFDERGINESTTDDNVQMTPSIISQELTNVGKKTMDENDP 79
           +SF A+  +Y N+  NKRVELFDE G++E T DDNV+M  S+ +QEL + GKKTMDE D 
Sbjct: 93  NSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQ 152

Query: 80  AIDSSKMVVEQTVEMGRQSAFTLEGQS 105
           AI  ++ VVEQT+E+G Q+A  L+GQ+
Sbjct: 153 AIQRTQKVVEQTIEVGTQTAAQLKGQT 179

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BLAST of Cla009207 vs. TrEMBL
Match: A0A0A0K9V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 5.8e-01
Identity = 18/26 (69.23%), Postives = 25/26 (96.15%), Query Frame = 1


Query: 1  MASSVQRSPRLDQIHGEIRDSFRAIS 27
          MAS++Q +P+L+QIHGEIRD+FRA+S
Sbjct: 1  MASALQMTPQLEQIHGEIRDNFRALS 26

HSP 2 Score: 89.4 bits (220), Expect = 5.4e-15
Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISY---TNTPANKRVELFDERGINESTTDDNVQMTP 60
           MAS+   SPRL+QIHGEIRD FRA++Y   + +    R++L D+    E   ++NVQM  
Sbjct: 1   MASNRPMSPRLEQIHGEIRDHFRALAYGMVSKSWIRSRIQL-DKASSGEPAAEENVQMAS 60

Query: 61  SIISQELTNVGKKTMDENDPAIDSSKM-----VVEQTVEMGRQSAFTLEGQ 104
           S+ +QE  + G K MDE D AI+ SK      VVEQT+E+G Q+A  L+GQ
Sbjct: 61  SMSNQEFVDAGMKRMDETDQAIERSKQVSYRKVVEQTLEVGTQTAANLKGQ 110

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BLAST of Cla009207 vs. TrEMBL
Match: V4S193_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005631mg PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.1e-15
Identity = 45/80 (56.25%), Postives = 61/80 (76.25%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGINESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSKM 85
           +Y N+  NK+VELFD   G++E T D+NVQ+  S+ +QEL + GKKTMDE D AI  S+M
Sbjct: 95  TYMNSLGNKKVELFDMGAGVSEPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQM 154

Query: 86  VVEQTVEMGRQSAFTLEGQS 105
           VVEQT+E+G Q+A TL+GQ+
Sbjct: 155 VVEQTIEVGTQTATTLKGQT 174

[Close]

BLAST of Cla009207 vs. TrEMBL
Match: V4S193_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005631mg PE=4 SV=1)

HSP 1 Score: 36.6 bits (83), Expect = 4.2e+01
Identity = 15/19 (78.95%), Postives = 19/19 (100.00%), Query Frame = 1


Query: 8  SPRLDQIHGEIRDSFRAIS 27
          SP+L+QIHGEIRD+FRA+S
Sbjct: 2  SPQLEQIHGEIRDNFRALS 20

HSP 2 Score: 89.0 bits (219), Expect = 7.1e-15
Identity = 45/80 (56.25%), Postives = 61/80 (76.25%), Query Frame = 1


Query: 26  SYTNTPANKRVELFDE-RGINESTTDDNVQMTPSIISQELTNVGKKTMDENDPAIDSSKM 85
           +Y N+  NK+VELFD   G++E T D+NVQ+  S+ +QEL + GKKTMDE D AI  S+M
Sbjct: 101 TYMNSLGNKKVELFDMGAGVSEPTADENVQVASSMSNQELIDAGKKTMDETDQAIKRSQM 160

Query: 86  VVEQTVEMGRQSAFTLEGQS 105
           VVEQT+E+G Q+A TL+GQ+
Sbjct: 161 VVEQTIEVGTQTATTLKGQT 180

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BLAST of Cla009207 vs. NCBI nr
Match: gi|449441646|ref|XP_004138593.1| (PREDICTED: uncharacterized protein LOC101203713 isoform X1 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 8.5e-46
Identity = 96/107 (89.72%), Postives = 102/107 (95.33%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSPRLDQIHGEIRDSFR I YTNTPANKRVELFDERGINES+TDDNVQMTPSII
Sbjct: 1   MASSVQRSPRLDQIHGEIRDSFRPIPYTNTPANKRVELFDERGINESSTDDNVQMTPSII 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEGQSTNT 108
           SQEL NVGKK MD++DPAI+SSKMVVEQT+EMGRQSAFTLEGQ+T T
Sbjct: 61  SQELNNVGKKIMDDSDPAIESSKMVVEQTIEMGRQSAFTLEGQATAT 107

[Close]

BLAST of Cla009207 vs. NCBI nr
Match: gi|659116834|ref|XP_008458283.1| (PREDICTED: uncharacterized protein LOC103497748 isoform X1 [Cucumis melo])

HSP 1 Score: 190.7 bits (483), Expect = 2.5e-45
Identity = 96/107 (89.72%), Postives = 101/107 (94.39%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSP+LDQIHGEIRDSFRAI YTNTPANKRVELFDERGINESTTDDNVQMT SI 
Sbjct: 1   MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSIT 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEGQSTNT 108
           SQEL NVGKK MD++DPAIDSSKMVVEQT+EMGRQSAFTLEGQ+T T
Sbjct: 61  SQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQATAT 107

[Close]

BLAST of Cla009207 vs. NCBI nr
Match: gi|778709007|ref|XP_011656330.1| (PREDICTED: uncharacterized protein LOC101203713 isoform X2 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 3.6e-44
Identity = 93/102 (91.18%), Postives = 98/102 (96.08%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSPRLDQIHGEIRDSFR I YTNTPANKRVELFDERGINES+TDDNVQMTPSII
Sbjct: 1   MASSVQRSPRLDQIHGEIRDSFRPIPYTNTPANKRVELFDERGINESSTDDNVQMTPSII 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEG 103
           SQEL NVGKK MD++DPAI+SSKMVVEQT+EMGRQSAFTLEG
Sbjct: 61  SQELNNVGKKIMDDSDPAIESSKMVVEQTIEMGRQSAFTLEG 102

[Close]

BLAST of Cla009207 vs. NCBI nr
Match: gi|659116836|ref|XP_008458284.1| (PREDICTED: uncharacterized protein LOC103497748 isoform X2 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 1.0e-43
Identity = 93/102 (91.18%), Postives = 97/102 (95.10%), Query Frame = 1


Query: 1   MASSVQRSPRLDQIHGEIRDSFRAISYTNTPANKRVELFDERGINESTTDDNVQMTPSII 60
           MASSVQRSP+LDQIHGEIRDSFRAI YTNTPANKRVELFDERGINESTTDDNVQMT SI 
Sbjct: 1   MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSIT 60

Query: 61  SQELTNVGKKTMDENDPAIDSSKMVVEQTVEMGRQSAFTLEG 103
           SQEL NVGKK MD++DPAIDSSKMVVEQT+EMGRQSAFTLEG
Sbjct: 61  SQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEG 102

[Close]

BLAST of Cla009207 vs. NCBI nr
Match: gi|449441500|ref|XP_004138520.1| (PREDICTED: novel plant SNARE 13 isoform X1 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 3.2e-16
Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 1


Query: 20  DSFRAI--SYTNTPANKRVELFDERGINESTTDDNVQMTPSIISQELTNVGKKTMDENDP 79
           +SF A+  +Y N+  NKRVELFDE G++E T DDNV+M  S+ +QEL + GKKTMDE D 
Sbjct: 93  NSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQ 152

Query: 80  AIDSSKMVVEQTVEMGRQSAFTLEGQS 105
           AI  ++ VVEQT+E+G Q+A  L+GQ+
Sbjct: 153 AIQRTQKVVEQTIEVGTQTAAQLKGQT 179

The following BLAST results are available for this feature:

BLAST of Cla009207 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NPS12_ARATH	2.5e-13	50.62	Novel plant SNARE 12 OS=Arabidopsis thaliana GN=NPSN12 PE=2 SV=1	[more]
NPS13_ARATH	4.3e-13	50.62	Novel plant SNARE 13 OS=Arabidopsis thaliana GN=NPSN13 PE=1 SV=1	[more]

BLAST of Cla009207 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCW9_CUCSA	5.9e-46	89.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G001720 PE=4 SV=1	[more]
A0A0A0K9V5_CUCSA	2.2e-16	55.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1	[more]
A0A0A0K9V5_CUCSA	5.8e-01	69.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G000720 PE=4 SV=1	[more]
V4S193_9ROSI	7.1e-15	56.25	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005631mg PE=4 SV=1	[more]
V4S193_9ROSI	4.2e+01	78.95	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005631mg PE=4 SV=1	[more]

BLAST of Cla009207 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441646\|ref\|XP_004138593.1\|	8.5e-46	89.72	PREDICTED: uncharacterized protein LOC101203713 isoform X1 [Cucumis sativus]	[more]
gi\|659116834\|ref\|XP_008458283.1\|	2.5e-45	89.72	PREDICTED: uncharacterized protein LOC103497748 isoform X1 [Cucumis melo]	[more]
gi\|778709007\|ref\|XP_011656330.1\|	3.6e-44	91.18	PREDICTED: uncharacterized protein LOC101203713 isoform X2 [Cucumis sativus]	[more]
gi\|659116836\|ref\|XP_008458284.1\|	1.0e-43	91.18	PREDICTED: uncharacterized protein LOC103497748 isoform X2 [Cucumis melo]	[more]
gi\|449441500\|ref\|XP_004138520.1\|	3.2e-16	55.17	PREDICTED: novel plant SNARE 13 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006896	Golgi to vacuole transport
biological_process	GO:0048280	vesicle fusion with Golgi apparatus
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to ER
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0006888	ER to Golgi vesicle-mediated transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0007165	signal transduction
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0031902	late endosome membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0012507	ER to Golgi transport vesicle membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0000149	SNARE binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla009207	Cla009207.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21230	VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED	coord: 33..103 score: 2.1
None	No IPR available	PANTHER	PTHR21230:SF35	SUBFAMILY NOT NAMED	coord: 33..103 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla009207	Cla97C06G113600	Watermelon (97103) v2	wmwmbB406
Cla009207	Csa6G000720	Cucumber (Chinese Long) v2	cuwmB546
Cla009207	MELO3C021232	Melon (DHL92) v3.5.1	mewmB141
Cla009207	ClCG06G004180	Watermelon (Charleston Gray)	wcgwmB344
Cla009207	CSPI06G00180	Wild cucumber (PI 183967)	cpiwmB565
Cla009207	Cucsa.135300	Cucumber (Gy14) v1	cgywmB237
Cla009207	CmaCh08G013090	Cucurbita maxima (Rimu)	cmawmB878
Cla009207	CmaCh17G003990	Cucurbita maxima (Rimu)	cmawmB358
Cla009207	CmoCh17G003900	Cucurbita moschata (Rifu)	cmowmB353
Cla009207	Lsi09G015270	Bottle gourd (USVL1VR-Ls)	lsiwmB040
Cla009207	Cp4.1LG12g03470	Cucurbita pepo (Zucchini)	cpewmB161
Cla009207	CsGy6G000210	Cucumber (Gy14) v2	cgybwmB511
Cla009207	MELO3C021229.2	Melon (DHL92) v3.6.1	medwmB139
Cla009207	Carg05578	Silver-seed gourd	carwmB0073
Cla009207	CsaV3_6G000220	Cucumber (Chinese Long) v3	cucwmB572
Cla009207	Bhi12G001772	Wax gourd	wgowmB105

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla009207	Cucurbita pepo (Zucchini)	cpewmB340