ClCG06G001790 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G001790
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RING finger protein
Location	CG_Chr06 : 1828593 .. 1834393 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCCTCCTACTTATGCTCCTCCTCCTTCCTTTCCTTTTAATCTCTTCTCTCCAAGTTTTGCTCTCATGAGTCATTTTGAGGGTTGTCATAATAATAATAATACTAACCATAATTCTCATGATCATCATCATCATCTCTTTCCTCTTCAAGATGATTCAACAACAACCAACCAAAACCCTTCTACTTCTAAGGATCTAACTCTTCATGACTCCGCCACCGCCACTGATAAGGGTTGGCTTCGTCTTAGCATCGGTACTGCCACCCCTGATGTCGTCGTTAACCACAACAAACACCACCACCATCATCAACAACCGCCAGGGTTTAGCTTTGGCTTGACCGAGCTCGATTTATTACCCTCTGACAGTGGCGTTGTCAGTTCGAAATTGAACGAGTCGTCGTTGGGGGTCGTTGGAGATTTTTCTACAACACCGGCTTTGGTTTTGCCTCCGCCGCCACCGGAGCTTAATTGGACGTTTAGACCTATCTCCTCTTATAACCCTTCCTCTTCTAATTGTTCTTCTTCTTTTATTCCATTTGGTCCTTACTTTTCAACTCCCTTTCAACTCCACCCTGGACTTGACTTAGTTGCTGCCACCACTGCCGCCGGATCCAGCTCCGACACGGTTAGGGTTATCGACCCTCCTCGCCGCCCTCATTCCGGGATTTGGTTTTCTCTTCAACCTTTGGAATTAAACCAGTAAGAAAACTCAATCTAATTACACCCCTTAACATATCTTCTTTTCTTTTTTGTCACAATCCCTACCTATCTAGGGATAATATTTTCCCTTTGGGTTTAGTTACAATCTTATACTAATAAAGTTCTTCAATTTTCCCTGCCCCTACTTTTTTTTTTTTCCTTTGATGTTTGATTTTTTGCAATGCAGAGGAAAACAACCAGTGTTGCCTCAAAGATCCAGCTACTTGCGAATCAAGTATTAATTCTATTTTTTTTCCTTAATTAAAATTGGATCTTCTTTAATTAGCAATTAGCAATTAGCATGTGGGTTTTATTTGCAAATGGTTGTTTTTGAAAATTTGAGTTTAATTTTTCTTGAATTAAGTTTAACTCATAAGTAAGTTTGATCTTTTGTGAAGGGATGGAAAGATGACAGTTCGATTACTAATCAAGTACTTGATGAAAAAGCTCAGACTGGATAACGAATTAGAGGTATTTATAAAATTAACTTACTTCATACATATATTTGGTTAACAATACTGCTGAGATTTCCCAAGAGAAAAAATTGGTTTTTTTTTTTTCTTTTTTTCTTTTCTTACTCATAAATCAAACTTAAACAACATGACAGAAACAGCACAACAAAAATATATATAAGAGGGTTTTCTTCTACATTACATTACAAGTTAGAAAAGCACAACAAAAACTGAACTTTTGTAGTATTAATTTTAGAAATATATGGGTGTGATTGAGATGAAAAGCTTTTGTCTTGTCGATATCTAGGGAATTGGGTCTTTTTTTTTCCTTTCTAAAATTTGAGGCACAAGCTTTCATGTCTGGTTCGTTATGGATTATTTTTATTTTTATTTTTATTTTTATTTTTTTGGGTTTCTCTTGTAACTTGAAAAAAAGTGGTATAAAGTAAAAGTTGATCAATAGATTTAATTTAAAAATGATGGGATTAAGTGTAAAAAAACATACACTAACCAACAACCGCTCCCTTTCCCAAAACCTAGAAGAAATGAGTTAAAAAAAACAACCTTATAAATTACAATTTATAATAAACTTAAAACTTAGAAGAAGGGTTGCTATTTTGCTATTTTCAGTATGGAAACAACTTCCTTGGTTATTCATAGATGTTCCTCAACTGTATTTAGCGAACAACCCAAGCAACAACCTTAACAAAATCGAAAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACATACACCAACAGTGATAAGTTCTCAGCTAAAACTGTTTTAACTGATCAACAAAGTAGTAAAAAATACTCAAAGGCCTAGAAATAGATGTAGCCAAGTTTAGATAGAGTTTAAAGATTGCAATATTATTGAACTCTAATAATTTTAGCTATGATTCATACATGTTACTGCAATTAATGTGCCTAAAAAAATTAGAAGATGTTGAGAGTTCAAATTATTCATAACATTTTAATTCTTTCTTAGAGAATTTTAGTGTTATGTATGTGAAGATAGATAAATAGAGGTTATAATAGTTTAGTATATGAATGATGTTAGATGGGCAATGAAACAATTGTTGCATTATATTGCTTCTCATTTACACTTGATGATGAAATACCCACTATTATATGTCTTCTTCCCTAATAATTGCATTGCCCTAAAAGTTTTCTTCCTACGCTTTATAATTTTTTTATTTATTATTTTTTCATTATTTGTGCCTAAAGTTACCTTAGTTTCGCACGAACGCAAGTATTTTCTCTTTATACATTCCACTTATCATATATTTCAAATTTATTTCTACATTCATTTGATCTTTACCAAAATGGCATGCAATTCAAGGCAGCATTTTTTTTTTCTTTTTTTGCTCTTATTATTACTATTTTTTCTTTTTTCTTTTGCAGTCCATGCATTATGAATTTCACTTTTGTGTTTTAAAACAGAAAAAATGGTTATTAAATCATATCTTGTGAGAAACTCCTCAATTTTCCTTTTTGCAAGTGGAACGAATGGTTTTCATTATTTTAATTAGAGCATTGTGCTTGTTTTTTGTAATTTCTTATGATGGTTATTCTTAGCCAAGATTTTAAAAAGACAAATATAAGTTTTTAAAAATTATATATATATTTTTTTTAAAATCAAAATTTAACTTGAATTTTGAAGACGATTGTAATAAGCATATAACAAAACAAAATAATTTTTCTTTGTAATGGTTTTATAAGCTTGACTTAGAAAAGATAACTAATTTGTCGAATGAGATCTTAATTATTGAGGATTAATTTAATTATATTTGATTCACGTTGTTCATGTTTTGAACTTTTTGGAGGTGATATTTGCAATTCTAATTAAAGAGAGAATTATATATGTAATTTAGAACAAACATGCATGCATGATCATATGATGTAAGGCATATATATAGACATGTTTAGTTTATTTCCATGATCATCATGCAATCCCTTAATGATGCTTCAAACAATATTTGAATTGAGGATTTTCTTAAATGGGTAATTTAAAAAATCATCAAAACCAAAATTGAAAAAAACTTGAGCTAATATCTTATCTTGTGTTAGAAAAGACTAGTATTTGCTTATAATGAAATCGAATATGCTCAATCATACCCAAAAGAAAACCAAATAAATTTATGTTATATGAAAGTTAATATATTATATTACATTCGTTCTTTGGAGAAAAAAAAAACTATACCTTCAGATAATAATAATAGTTAGGCCTAGAAAATTATGAAGCAAGGATCATTACATTTGTCTTCAGTACAAAAAACAACTTTTCTTAATTATTATTATGTGTGTGTTGATCTAAGCCAGTTGTCCATAGTTTGTTTAAAAATTAAACACATATATATATGTGATTACTTAGGATATATTTGACATACCCAGACATTCCATTTGATTAGACTACTCACAAACTTTTGTGTAAACATTATTATTGTTTAATTAGGAGTCAACTCTAATTATTGATTAATGAATAATGCATATTTTTTTCGTCTTATTGCATGCTCTTCATGTCATGAACAGACAGCTATTGAATGGCCTTATTCTATTCATAGAGAGAAAGAGAGAGATAGAAGACTTAGGATGGTTGACTAACTAGGGTTAACTCGCATTCTTCATTCTTCAACACACAATAAAAAAGCAAAAGAAAACTTAAGCTCACCGTTTAAGGTATGACATTTTAATAATTTCCTCTCCACGTAAACATTAAATAATAATTTGAAAAACAAAATAAATTCCAACGAACAATAATTTTATCCATTTTATAAAACACATTCAAATCGCAACCTAAACATATCAATTGGTTAATAACCAAGAAGTCAGATATACAAATTATACCACATATTTGTCAAAACACAAGAAAAAAAGAAAAAGAAAAAAACATTTCACTTCATGTGAATACATGAGTTGACTTATTAATCACTTAGTAAAGATTAATTCTTTGCTTTTGTTTGTGATCATTATTATGATTCATTTTTTTTTATTGGTTTATTTATGTTGTGTTTAATTAGGTGAGAATAATGCAATGAATTAGTTAGTAGGGGTTTGTTATTATAATTGGTGCGTAGAGCCTAGAATTTTTATTCTATGAATATTATTTAGATAAATATTAATAGTTTATGTTCCTAATTATATATTGAAGTAAACTATGGATAATGTTTATTGGTATATATTTTTAGGAAGAATAAATAATAAGCTTTGGATGATTCCTAAGTATTTTTATATAATATTATTTTATGTGTCTACGTGCCAACTACGTATTTGATATACAGATTGGACGGCATGCATGGAAAATGCATATTGTTTTTATTTTTATTTTTGGAAAAACGAAAATAAACGAAAAGAAAAAAGCAAAAAAGAGGGTGGTGGTGAAGTAGAAGTAGAAGGGAAGGGATGAGATGAGATTAAAGATTTATAATTATGATATCATCGTAGGGCCAGGAAAATCCCACGTGGATACTTTTCATATCTTATTACCTACAACCTTCCACACATGATTCGTCCTCGTTTTCTTATGTCATGCTTTCGTCTCTCCCACATCACCATCTTCTTCTTCTTCTTCTTCTTCTTTCCATTTTCATTTTTTCATTTCTTTGCTTCAAAAGTTTCAATCAAAACCTCTCTCTCTTGTTTATTTTTTTTTTTCTTTTCATCTAACCAATGAAATTGGAGAGAGATAATACAATAGTAATAATAATAATAATAATAGGATTGAATGATTCATGGGTCGTTGAAAATAAACATTAGGAATAATTGTATATATTATATAATAAAAAAAACACATATACACAATAATTAAGGAGGAGAAAAGTTTAGGGTCGGATTTATATATAAATTTATAATTTGAAGAACAAAAAAGAAAAAAAAAAAAGTTGAAGAAGAGGAATATTTGAGGTATTAGGAATGTGAAAGAGACATGCATGAGCATGAGATGAAGATTTTGATAATACAAAGTGGGTAATGAGTGCAATATATTGAGGTTTGTGGGCCCTTTTATTCATTAGGGTTTCGGGCAGTCTCTCTTTGCCCTTTTGTGTCTGCCCCGGGCAGGGGCAATATTGTCCTTAGCAACTCACCAACTCAACTCTAGCTAGTTCCATCTCGGGATTTTGAATAGGGCGGCTGCACCTAATTTCTTGTTTTCCTTACCGTTATATAGTAAAAATAAAATTTTTAAAAATCACTATTTCTTTAAAAAAAAAAAAAAAAAAAATCCTTTCATTAGGTGTTGTCTGGAGTGCATAAGAGATGAGTCCAATTTAGACTGTACTCAAACTTTTTTTCTTCTTTCTTCTTTCGAATATGTTTTTAAGTATTAAGGAAGTCGATATAAATAAATTATTAGTATGAGTCGTTTAATGTTTTGAATTTTGAGAATTTAAATGTATTAACGTAGATTATTGTTGATTTTTCAGATCGAGATAAGATGCAAAGGGGAAAAGCTTGAACCTTGCTTGACAATGCAGCATATTAGAGATACAATTTGGTGCTCCAAAGACTCAGCTCTTACCACTTTGCTTCCAAATTCCTCAACTATTGATCACATTATGGTTCTTCACTATGCCATAATTCCTCCTACCCCTAATTCTCCTTCTCCTTCTTAA

mRNA sequence

ATGGTTCCTCCTACTTATGCTCCTCCTCCTTCCTTTCCTTTTAATCTCTTCTCTCCAAGTTTTGCTCTCATGAGTCATTTTGAGGGTTGTCATAATAATAATAATACTAACCATAATTCTCATGATCATCATCATCATCTCTTTCCTCTTCAAGATGATTCAACAACAACCAACCAAAACCCTTCTACTTCTAAGGATCTAACTCTTCATGACTCCGCCACCGCCACTGATAAGGGTTGGCTTCGTCTTAGCATCGGTACTGCCACCCCTGATGTCGTCGTTAACCACAACAAACACCACCACCATCATCAACAACCGCCAGGGTTTAGCTTTGGCTTGACCGAGCTCGATTTATTACCCTCTGACAGTGGCGTTGTCAGTTCGAAATTGAACGAGTCGTCGTTGGGGGTCGTTGGAGATTTTTCTACAACACCGGCTTTGGTTTTGCCTCCGCCGCCACCGGAGCTTAATTGGACGTTTAGACCTATCTCCTCTTATAACCCTTCCTCTTCTAATTGTTCTTCTTCTTTTATTCCATTTGGTCCTTACTTTTCAACTCCCTTTCAACTCCACCCTGGACTTGACTTAGTTGCTGCCACCACTGCCGCCGGATCCAGCTCCGACACGGTTAGGGTTATCGACCCTCCTCGCCGCCCTCATTCCGGGATTTGGTTTTCTCTTCAACCTTTGGAATTAAACCAAGGAAAACAACCAGTGTTGCCTCAAAGATCCAGCTACTTGCGAATCAAGGATGGAAAGATGACAGTTCGATTACTAATCAAGTACTTGATGAAAAAGCTCAGACTGGATAACGAATTAGAGATCGAGATAAGATGCAAAGGGGAAAAGCTTGAACCTTGCTTGACAATGCAGCATATTAGAGATACAATTTGGTGCTCCAAAGACTCAGCTCTTACCACTTTGCTTCCAAATTCCTCAACTATTGATCACATTATGGTTCTTCACTATGCCATAATTCCTCCTACCCCTAATTCTCCTTCTCCTTCTTAA

Coding sequence (CDS)

ATGGTTCCTCCTACTTATGCTCCTCCTCCTTCCTTTCCTTTTAATCTCTTCTCTCCAAGTTTTGCTCTCATGAGTCATTTTGAGGGTTGTCATAATAATAATAATACTAACCATAATTCTCATGATCATCATCATCATCTCTTTCCTCTTCAAGATGATTCAACAACAACCAACCAAAACCCTTCTACTTCTAAGGATCTAACTCTTCATGACTCCGCCACCGCCACTGATAAGGGTTGGCTTCGTCTTAGCATCGGTACTGCCACCCCTGATGTCGTCGTTAACCACAACAAACACCACCACCATCATCAACAACCGCCAGGGTTTAGCTTTGGCTTGACCGAGCTCGATTTATTACCCTCTGACAGTGGCGTTGTCAGTTCGAAATTGAACGAGTCGTCGTTGGGGGTCGTTGGAGATTTTTCTACAACACCGGCTTTGGTTTTGCCTCCGCCGCCACCGGAGCTTAATTGGACGTTTAGACCTATCTCCTCTTATAACCCTTCCTCTTCTAATTGTTCTTCTTCTTTTATTCCATTTGGTCCTTACTTTTCAACTCCCTTTCAACTCCACCCTGGACTTGACTTAGTTGCTGCCACCACTGCCGCCGGATCCAGCTCCGACACGGTTAGGGTTATCGACCCTCCTCGCCGCCCTCATTCCGGGATTTGGTTTTCTCTTCAACCTTTGGAATTAAACCAAGGAAAACAACCAGTGTTGCCTCAAAGATCCAGCTACTTGCGAATCAAGGATGGAAAGATGACAGTTCGATTACTAATCAAGTACTTGATGAAAAAGCTCAGACTGGATAACGAATTAGAGATCGAGATAAGATGCAAAGGGGAAAAGCTTGAACCTTGCTTGACAATGCAGCATATTAGAGATACAATTTGGTGCTCCAAAGACTCAGCTCTTACCACTTTGCTTCCAAATTCCTCAACTATTGATCACATTATGGTTCTTCACTATGCCATAATTCCTCCTACCCCTAATTCTCCTTCTCCTTCTTAA

Protein sequence

MVPPTYAPPPSFPFNLFSPSFALMSHFEGCHNNNNTNHNSHDHHHHLFPLQDDSTTTNQNPSTSKDLTLHDSATATDKGWLRLSIGTATPDVVVNHNKHHHHHQQPPGFSFGLTELDLLPSDSGVVSSKLNESSLGVVGDFSTTPALVLPPPPPELNWTFRPISSYNPSSSNCSSSFIPFGPYFSTPFQLHPGLDLVAATTAAGSSSDTVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPQRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKLEPCLTMQHIRDTIWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSPSPS

Homology

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BLAST of ClCG06G001790 vs. Swiss-Prot
Match: DRIP1_ARATH (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 218 RPHSGIWFSLQPLELNQGKQPVLPQRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEI 277
           R +  +WFSL      +G   +    +++LRI+DG  TV  + KYLM+KL L++E EIEI
Sbjct: 306 RRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEI 365

Query: 278 RCKGEKLEPCLTMQHIRDTIWCSKDS--ALTTLLPNSSTIDHIMVLHYA 325
           +C GE + P LT+ ++ D +W  K S       L  SS  D  MVL YA
Sbjct: 366 KCMGEAVIPTLTLYNLVD-LWLQKSSNHQRFAALVGSSAKDFTMVLVYA 413

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BLAST of ClCG06G001790 vs. Swiss-Prot
Match: DRIP2_ARATH (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana GN=DRIP2 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.4e-09
Identity = 40/117 (34.19%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 218 RPHSGIWFSLQPLELNQGKQPVLPQRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEI 277
           R +  +WFSL      +G+  +    ++YLRI+DG + V  + KYLM+KL L +E E+EI
Sbjct: 305 RRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEI 364

Query: 278 RCKGEKLEPCLTMQHIRDTIWCSKDSALTTLLPN--SSTIDHIMVLHYAIIPPTPNS 333
            C GE + P L +  + D +W    S    +  +  SS  + +MVL Y+   P  N+
Sbjct: 365 TCMGEPVIPTLQLHSLVD-LWLETTSKHQRVAASIGSSAKEFVMVLVYSRKLPECNN 420

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BLAST of ClCG06G001790 vs. Swiss-Prot
Match: DRIPH_ARATH (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana GN=At3g23060 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07
Identity = 45/158 (28.48%), Postives = 76/158 (48.10%), Query Frame = 1


Query: 188 FQLHPGLDLVAATTAAGSSSDTVRV-IDPPRRPHSG-----IWFSLQPLELNQGKQPVLP 247
           + L P +       AAG+++    V ++   +   G     +WFSL+P +    +  + P
Sbjct: 324 YSLRPRIGRRTVNPAAGTTTPEAPVSVEEEMKVEEGRNNNPVWFSLKPSKTQNIEMLLPP 383

Query: 248 QRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKLEPCLTMQHIRDTIWCSK 307
             +  +R+KD  MTV  L KYLM KL L++E ++EI  + E +   LT+ ++ D  W  +
Sbjct: 384 ITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIWLRDEPVCSSLTLHNLVD--WWVQ 443

Query: 308 DSAL---TTLLPNSSTIDHIMVLHYAIIPPTPNSPSPS 337
            + L    + +  SS  + IM L+Y+      +S S S
Sbjct: 444 TTPLPERQSAMVGSSAAEFIMDLYYSFKSDASDSGSAS 479

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BLAST of ClCG06G001790 vs. TrEMBL
Match: A0A0A0KC58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091920 PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 2.2e-165
Identity = 300/341 (87.98%), Postives = 306/341 (89.74%), Query Frame = 1


Query: 1   MVPPTYAPPPS-FPFNLFSPSFALMSHFEGCHNNNNTNHNSHDHHHHLFPLQDDSTTTNQ 60
           MVPPTYAPPPS FPFNLFSPSF LMSHFEG HNNNN   NSH H HHLFPLQD  +TTNQ
Sbjct: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHNNNN---NSHHHQHHLFPLQDHDSTTNQ 60

Query: 61  NPSTSKDLTLHDSATATDKGWLRLSIGTATPDVVVNHNKHHHHHQQPPGFSFGLTELDLL 120
           N STSKDLTLHDSA   DK WLRLSIG  TPDVVV HN HHHHHQQPPGF FGLTE+DLL
Sbjct: 61  NSSTSKDLTLHDSAVVADKSWLRLSIGATTPDVVV-HNHHHHHHQQPPGFRFGLTEVDLL 120

Query: 121 PSDSGVVSSKLNESSLGVVGDFSTTPALVL-PPPPPELNWTFRPISSYNPSSSNCSSSFI 180
           PSD GV  SK NESSLGVVG+FS TPALVL PPPPPELNWTFRPISS+N SSSNCSSSFI
Sbjct: 121 PSD-GV--SKSNESSLGVVGNFSPTPALVLPPPPPPELNWTFRPISSHNSSSSNCSSSFI 180

Query: 181 PFGPYFSTPFQLHPGLDLVAAT--TAAGSSSDTVRVIDPPRRPHSGIWFSLQPLELNQGK 240
           PFGPYFSTPFQLHPGLDLVAAT   AAGSSSD VRVIDPPRRPHSGIWFSLQPLELNQGK
Sbjct: 181 PFGPYFSTPFQLHPGLDLVAATAAAAAGSSSDAVRVIDPPRRPHSGIWFSLQPLELNQGK 240

Query: 241 QPVLPQRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKLEPCLTMQHIRDT 300
           QPVLP RSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIE+RC+GEKLE CLTMQHIRD 
Sbjct: 241 QPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDK 300

Query: 301 IWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSP-SPS 337
           IWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSP SPS
Sbjct: 301 IWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSPNSPS 334

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BLAST of ClCG06G001790 vs. TrEMBL
Match: A0A061E508_THECC (RING finger protein, putative OS=Theobroma cacao GN=TCM_008415 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-54
Identity = 142/326 (43.56%), Postives = 188/326 (57.67%), Query Frame = 1


Query: 17  FSPSFALMSHFEGCHNNNNTNHNSHDHHHHLFPLQDDSTTTNQNPSTSKDLTLHDSATAT 76
           ++ SF LMS   G   ++     S    + +   +  + + N+  S+SKD    ++    
Sbjct: 31  YTESFGLMSRVHGYDYHSEACLGSDLVANSMAEDESRTNSLNEERSSSKD----NNQEEK 90

Query: 77  DKGWLRLSIGTATPDVVVNHNKHHHHHQQPPGFSFGLTELDLLPSDSGVVSSKLNES--- 136
           D+GWL+L IG         ++   H    P     GL ELDLLP  S   +  L  +   
Sbjct: 91  DEGWLQLGIGGQA----TRYDSSKHDQGDPTARRGGLIELDLLPGGSSQQARPLAPTFNM 150

Query: 137 ------SLGVVGDFSTTPALVLPP------PPPELNWTFRPIS---SYNPSSSNCSSSFI 196
                    V+  FST+             P  E+NW FRPIS   +  PSSS+ SSS +
Sbjct: 151 PEFRAPRPPVMHSFSTSLFFQHQQGSSSTFPQGEINWAFRPISQNIAAAPSSSSSSSSLV 210

Query: 197 PFGPYFSTPFQLHPGLDLVAATTAAGSSSDTVRVIDPPRRPHSGIWFSLQPLELNQGKQP 256
           P G +F+ PFQ+  G+D+      AG SSD VR+IDPPRRPHSGIWF LQ  + NQ K+P
Sbjct: 211 PLGSHFARPFQVQLGMDV------AGPSSD-VRIIDPPRRPHSGIWFMLQASQ-NQAKEP 270

Query: 257 VLPQ-RSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKLEPCLTMQHIRDTI 316
            LPQ   SYLRIKDGKMTVRLL+KYL+ KLRLD+E EIEI C+G++L P LT+Q++RD I
Sbjct: 271 FLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLDSESEIEITCRGQQLVPYLTLQNVRDQI 330

Query: 317 WCSKDSALTTLLPNSSTIDHIMVLHY 324
           W S+D+   TLLP +ST DH+MVLHY
Sbjct: 331 WSSRDA--VTLLPETSTADHVMVLHY 338

[Close]

BLAST of ClCG06G001790 vs. TrEMBL
Match: A0A0D2PVX2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G196300 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 9.5e-52
Identity = 145/343 (42.27%), Postives = 190/343 (55.39%), Query Frame = 1


Query: 17  FSPSFALMSHFEGCHNNNNTNHNSHDHHHHLFPLQDDSTTTNQNP--STSKDLTLHDSAT 76
           ++ SF LMS   G   +      S    + +   +D+STT + N   S SKD    +   
Sbjct: 31  YTESFGLMSRVYGYDFHAEAYVGSDLAANRM--AEDESTTNSLNEAGSNSKDNN-QELEL 90

Query: 77  ATDKGWLRLSIGTATPDVVVNHNKHHHHHQQPPGFSFGLTELDLLPSDSGVVSSKLNESS 136
             D+GWL+L +G         ++ + H+   P     G+ ELDLLP      +  L    
Sbjct: 91  ERDEGWLQLGLGGQP----TRYDDNKHYQGDPTARRGGMIELDLLPGGMSQQARPL---- 150

Query: 137 LGVV---GDFSTTPALVLP---------------------PPPPELNWTFRPISSY---- 196
           LG +    DF   P    P                     P   EL+ +FRPI+      
Sbjct: 151 LGPIFHMPDFRAPPPPPPPLMHSFSSSLFFQHQQGSSSTFPHHGELSSSFRPIAQNIAAA 210

Query: 197 -NPSSSNCSSSFIPFGPYFSTPFQLHPGLDLVAATTAAGSSSDTVRVIDPPRRPHSGIWF 256
            + SSS+ SSS +P G YF+ PFQ+   +D+      AG SSD VR+IDPPRRPHSGIWF
Sbjct: 211 PSASSSSSSSSLVPLGSYFARPFQVLSEMDV------AGPSSD-VRIIDPPRRPHSGIWF 270

Query: 257 SLQPLELNQGKQPVLPQ-RSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKL 316
            LQ  + NQ K+P LPQ R SYLRIKDGKMTVRLL+KYL+ KLRLD+E EIEIRC+G++L
Sbjct: 271 MLQASQ-NQAKEPFLPQIRKSYLRIKDGKMTVRLLMKYLVSKLRLDSESEIEIRCRGQQL 330

Query: 317 EPCLTMQHIRDTIWCSKDSALTTLLPNSSTIDHIMVLHYAIIP 328
           +P LT+Q +RD IW S+D+   TLLP +ST DH+MVLHY   P
Sbjct: 331 QPSLTLQQVRDQIWSSRDA--VTLLPRTSTADHLMVLHYGRTP 352

[Close]

BLAST of ClCG06G001790 vs. TrEMBL
Match: D7U621_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0146g00510 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.8e-48
Identity = 133/297 (44.78%), Postives = 173/297 (58.25%), Query Frame = 1


Query: 56  TTNQNPSTSKDLTLHDSATATDKGWLRLSIGTATPDVVVNHNKHHHHHQ-QPPGFSFGLT 115
           + N+  S+SKD+         D+ WL+LSIG           +HHHHHQ  P     G+ 
Sbjct: 65  SVNETGSSSKDMQ-----EDRDEEWLQLSIGGQMTSQ--ERKQHHHHHQLDPMSGRGGMV 124

Query: 116 ELDLLPSDS--------GVVSSKLNESS-------LGVVGDFSTTPALVLPPPPP----- 175
           EL+LLP  S        G +   L +           +   FST+  L    P       
Sbjct: 125 ELNLLPGRSGSQQGRPLGPIIHHLPDFRPPPPRPITNITNSFSTSLFLQQQQPGAASNFP 184

Query: 176 ---ELNWTFRPI-SSYNPSSSNCSSSFIPFGPYFSTPFQLH-PGLDLVAATTAAGSSSDT 235
              ++NW FR I  +   +SS+ SSSFIP  PYF+TPFQLH PG+D+      AG SSD 
Sbjct: 185 HLQDINWAFRHIPQNITSASSSTSSSFIPQAPYFATPFQLHAPGVDV------AGPSSD- 244

Query: 236 VRVIDP--PRRPHSGIWFSLQPLELNQGKQPVLPQ-RSSYLRIKDGKMTVRLLIKYLMKK 295
            R+I+     RPHSG+WF LQ  + NQ K+P LPQ   SYLRIKDG+MTVRLL+KY++ K
Sbjct: 245 FRIINANASHRPHSGVWFLLQASQ-NQAKEPFLPQIPKSYLRIKDGRMTVRLLMKYVVNK 304

Query: 296 LRLDNELEIEIRCKGEKLEPCLTMQHIRDTIWCSKDSALTTLLPNSSTIDHIMVLHY 324
           LRLD+E EIEI C+G++L P  T+QH+RD IW  +D ALT L P+SST DH+MVL+Y
Sbjct: 305 LRLDSESEIEITCRGQQLLPFFTLQHVRDNIWSPRD-ALTFLQPDSSTSDHVMVLNY 345

[Close]

BLAST of ClCG06G001790 vs. TrEMBL
Match: A0A0D2S229_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G125300 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.7e-46
Identity = 128/319 (40.13%), Postives = 179/319 (56.11%), Query Frame = 1


Query: 17  FSPSFALMSHFEGCHNNNNTNHNSHDHHHHLFPLQDDSTTTNQNPSTSKDLTLHDSATAT 76
           ++ +F LM+   G   +N     S    + +      + + N+  S+SKD    +     
Sbjct: 37  YTENFGLMNRLHGYDYHNEACLGSDLGANQMAENPSRTNSLNETGSSSKDYN-QEQEERD 96

Query: 77  DKGWLRLSIGTATPDVVVNHNKHHHHHQQPP--GFSFGLTELDLLPSDSGVVSSKLNESS 136
           D+GWL+LSIG        +H+ HH+ H Q        GLTELDLLP  +           
Sbjct: 97  DEGWLQLSIGGHATKY--HHHHHHNKHDQVDLTATRGGLTELDLLPGGTCHQERPHMPEF 156

Query: 137 LG-----VVGDFSTTPALVLPPPPPELNWTFRPISSYNPSSSNCSSSFIPFGPYFSTPFQ 196
                  V+  F+T+  L         +   RPI++     +   S  +P G YF+ PFQ
Sbjct: 157 RPPLHPLVMQGFTTSLFLQQQGTSSMFSRACRPIAA-----ATAPSPLVPLGSYFARPFQ 216

Query: 197 LHPGLDLVAATTAAGSSSDTVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPQ-RSSYLR 256
           + PG+D+      AG S+D  ++IDPPRRPHSGIWF LQ  E NQ K+P LPQ   SYLR
Sbjct: 217 VQPGIDV------AGPSTD-FKIIDPPRRPHSGIWFILQASE-NQAKEPFLPQIPKSYLR 276

Query: 257 IKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKLEPCLTMQHIRDTIWCSKDSALTTL 316
           IKDGKMTV  ++KYL+ KL+LD+E E+EIRC+GE+LEP LT++H+RD IW S D A+ TL
Sbjct: 277 IKDGKMTVGSIMKYLVNKLKLDSESEVEIRCRGEELEPGLTLEHVRDQIWSSTD-AVVTL 336

Query: 317 LPNSSTID----HIMVLHY 324
           LP++ST      ++M+LHY
Sbjct: 337 LPHTSTPPSLHFNLMLLHY 338

[Close]

BLAST of ClCG06G001790 vs. TAIR10
Match: AT5G13250.1 (AT5G13250.1 RING finger protein)

HSP 1 Score: 157.1 bits (396), Expect = 1.8e-38
Identity = 93/172 (54.07%), Postives = 110/172 (63.95%), Query Frame = 1


Query: 160 FRPISSYNPSSSNCSSSFIPF-GPYFSTPFQLHPGLDLVAATTAAGSSSDTVRVIDPPRR 219
           F P +   PSSS+  S  +P  G YF       P L            S ++RVIDPPRR
Sbjct: 213 FVPQNLTQPSSSSSGSLMMPLMGQYFGRS-SFQPQLIGNDNPDGVAGPSSSLRVIDPPRR 272

Query: 220 PHSGIWFSLQPLELNQGKQPVLPQ-RSSYLRIKDGKMTVRLLIKYLMKKLRLDNE-LEIE 279
           PHSGIWF LQ  + NQ  +P LPQ   SYLRIKDGKMTVRLL+KYL+ KLRL++E  ++E
Sbjct: 273 PHSGIWFLLQASQ-NQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQQVE 332

Query: 280 IRCKGEKLEPCLTMQHIRDTIW-----CSKDSALTTLLPNSSTIDHIMVLHY 324
           IRC+G++LEP LT+QH+RD IW      S  S   TLLPNSST DH+MVLHY
Sbjct: 333 IRCRGQELEPVLTLQHVRDAIWRGSRDTSSLSQNITLLPNSSTSDHLMVLHY 382

[Close]

BLAST of ClCG06G001790 vs. TAIR10
Match: AT1G28080.1 (AT1G28080.1 RING finger protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-19
Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 1


Query: 203 AGSSSDTVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPQ-RSSYLRIKDGKMTVRLLIK 262
           AG SS+  RV+DPPRRPHSG+WF LQ  +  Q ++P LPQ   SYLRIKDG++TVRLLIK
Sbjct: 218 AGPSSE-FRVLDPPRRPHSGLWFLLQASQF-QEREPFLPQVNKSYLRIKDGRITVRLLIK 277

Query: 263 YLMKKLRLDNELEIEI 278
           YLMKKL LD+E E+ I
Sbjct: 278 YLMKKLELDSESEVNI 291

[Close]

BLAST of ClCG06G001790 vs. TAIR10
Match: AT1G06770.1 (AT1G06770.1 DREB2A-interacting protein 1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-12
Identity = 44/109 (40.37%), Postives = 60/109 (55.05%), Query Frame = 1


Query: 218 RPHSGIWFSLQPLELNQGKQPVLPQRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEI 277
           R +  +WFSL      +G   +    +++LRI+DG  TV  + KYLM+KL L++E EIEI
Sbjct: 306 RRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEI 365

Query: 278 RCKGEKLEPCLTMQHIRDTIWCSKDS--ALTTLLPNSSTIDHIMVLHYA 325
           +C GE + P LT+ ++ D +W  K S       L  SS  D  MVL YA
Sbjct: 366 KCMGEAVIPTLTLYNLVD-LWLQKSSNHQRFAALVGSSAKDFTMVLVYA 413

[Close]

BLAST of ClCG06G001790 vs. TAIR10
Match: AT2G30580.1 (AT2G30580.1 DREB2A-interacting protein 2)

HSP 1 Score: 63.2 bits (152), Expect = 3.6e-10
Identity = 40/117 (34.19%), Postives = 61/117 (52.14%), Query Frame = 1


Query: 218 RPHSGIWFSLQPLELNQGKQPVLPQRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEI 277
           R +  +WFSL      +G+  +    ++YLRI+DG + V  + KYLM+KL L +E E+EI
Sbjct: 305 RRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEI 364

Query: 278 RCKGEKLEPCLTMQHIRDTIWCSKDSALTTLLPN--SSTIDHIMVLHYAIIPPTPNS 333
            C GE + P L +  + D +W    S    +  +  SS  + +MVL Y+   P  N+
Sbjct: 365 TCMGEPVIPTLQLHSLVD-LWLETTSKHQRVAASIGSSAKEFVMVLVYSRKLPECNN 420

[Close]

BLAST of ClCG06G001790 vs. TAIR10
Match: AT3G23060.1 (AT3G23060.1 RING/U-box superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 6.8e-09
Identity = 45/158 (28.48%), Postives = 76/158 (48.10%), Query Frame = 1


Query: 188 FQLHPGLDLVAATTAAGSSSDTVRV-IDPPRRPHSG-----IWFSLQPLELNQGKQPVLP 247
           + L P +       AAG+++    V ++   +   G     +WFSL+P +    +  + P
Sbjct: 324 YSLRPRIGRRTVNPAAGTTTPEAPVSVEEEMKVEEGRNNNPVWFSLKPSKTQNIEMLLPP 383

Query: 248 QRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKLEPCLTMQHIRDTIWCSK 307
             +  +R+KD  MTV  L KYLM KL L++E ++EI  + E +   LT+ ++ D  W  +
Sbjct: 384 ITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIWLRDEPVCSSLTLHNLVD--WWVQ 443

Query: 308 DSAL---TTLLPNSSTIDHIMVLHYAIIPPTPNSPSPS 337
            + L    + +  SS  + IM L+Y+      +S S S
Sbjct: 444 TTPLPERQSAMVGSSAAEFIMDLYYSFKSDASDSGSAS 479

[Close]

BLAST of ClCG06G001790 vs. NCBI nr
Match: gi|449445780|ref|XP_004140650.1| (PREDICTED: uncharacterized protein LOC101204945 [Cucumis sativus])

HSP 1 Score: 589.7 bits (1519), Expect = 3.2e-165
Identity = 300/341 (87.98%), Postives = 306/341 (89.74%), Query Frame = 1


Query: 1   MVPPTYAPPPS-FPFNLFSPSFALMSHFEGCHNNNNTNHNSHDHHHHLFPLQDDSTTTNQ 60
           MVPPTYAPPPS FPFNLFSPSF LMSHFEG HNNNN   NSH H HHLFPLQD  +TTNQ
Sbjct: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHNNNN---NSHHHQHHLFPLQDHDSTTNQ 60

Query: 61  NPSTSKDLTLHDSATATDKGWLRLSIGTATPDVVVNHNKHHHHHQQPPGFSFGLTELDLL 120
           N STSKDLTLHDSA   DK WLRLSIG  TPDVVV HN HHHHHQQPPGF FGLTE+DLL
Sbjct: 61  NSSTSKDLTLHDSAVVADKSWLRLSIGATTPDVVV-HNHHHHHHQQPPGFRFGLTEVDLL 120

Query: 121 PSDSGVVSSKLNESSLGVVGDFSTTPALVL-PPPPPELNWTFRPISSYNPSSSNCSSSFI 180
           PSD GV  SK NESSLGVVG+FS TPALVL PPPPPELNWTFRPISS+N SSSNCSSSFI
Sbjct: 121 PSD-GV--SKSNESSLGVVGNFSPTPALVLPPPPPPELNWTFRPISSHNSSSSNCSSSFI 180

Query: 181 PFGPYFSTPFQLHPGLDLVAAT--TAAGSSSDTVRVIDPPRRPHSGIWFSLQPLELNQGK 240
           PFGPYFSTPFQLHPGLDLVAAT   AAGSSSD VRVIDPPRRPHSGIWFSLQPLELNQGK
Sbjct: 181 PFGPYFSTPFQLHPGLDLVAATAAAAAGSSSDAVRVIDPPRRPHSGIWFSLQPLELNQGK 240

Query: 241 QPVLPQRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKLEPCLTMQHIRDT 300
           QPVLP RSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIE+RC+GEKLE CLTMQHIRD 
Sbjct: 241 QPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDK 300

Query: 301 IWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSP-SPS 337
           IWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSP SPS
Sbjct: 301 IWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSPNSPS 334

[Close]

BLAST of ClCG06G001790 vs. NCBI nr
Match: gi|659119902|ref|XP_008459904.1| (PREDICTED: uncharacterized protein LOC103498884 [Cucumis melo])

HSP 1 Score: 583.6 bits (1503), Expect = 2.3e-163
Identity = 297/338 (87.87%), Postives = 306/338 (90.53%), Query Frame = 1


Query: 1   MVPPTYAPPPS-FPFNLFSPSFALMSHFEGCHNNNNTNHNSHDHHHHLFPLQD-DSTTTN 60
           MVPPTYAPPPS FPFNLFSPSF LMSHFEG HNNNNTN+NSH    HLFPLQD DSTTTN
Sbjct: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHNNNNTNNNSH----HLFPLQDHDSTTTN 60

Query: 61  QNPSTSKDLTLHDSATATDKGWLRLSIGTATPDVVVNHNKHHHHHQQPPGFSFGLTELDL 120
           QN STSKDLTLHDSA   DKGWLRLS+G  TPDVVV+H  HHHHHQQPPGF  GLTELDL
Sbjct: 61  QNSSTSKDLTLHDSAAVADKGWLRLSVGATTPDVVVHH--HHHHHQQPPGFRLGLTELDL 120

Query: 121 LPSDSGVVSSKLNESSLGVVGDFSTTPALVLPPPPP-ELNWTFRPISSYNPSSSNCSSSF 180
           LPSD GV  SK NESSLGVVG+FS +PALVLPPPPP ELNWTFRPISS+N SSSNCSSSF
Sbjct: 121 LPSD-GV--SKSNESSLGVVGNFSPSPALVLPPPPPAELNWTFRPISSHNSSSSNCSSSF 180

Query: 181 IPFGPYFSTPFQLHPGLDLVAATTAA-GSSSDTVRVIDPPRRPHSGIWFSLQPLELNQGK 240
           IPFGPYFSTPFQLHPGLDLVAAT AA GSSS  VRVIDPPRRPHSGIWFSLQPLELNQGK
Sbjct: 181 IPFGPYFSTPFQLHPGLDLVAATAAAAGSSSGAVRVIDPPRRPHSGIWFSLQPLELNQGK 240

Query: 241 QPVLPQRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKLEPCLTMQHIRDT 300
           QPVLP RSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIE+RC+GEKLE CLTMQHIRD 
Sbjct: 241 QPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDK 300

Query: 301 IWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSPS 335
           IWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSP+
Sbjct: 301 IWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSPN 329

[Close]

BLAST of ClCG06G001790 vs. NCBI nr
Match: gi|743880266|ref|XP_011036153.1| (PREDICTED: uncharacterized protein LOC105133752 isoform X2 [Populus euphratica])

HSP 1 Score: 228.4 bits (581), Expect = 1.8e-56
Identity = 158/360 (43.89%), Postives = 199/360 (55.28%), Query Frame = 1


Query: 17  FSPSFALMSHFEGCHNN-NNTNHNSHDHHHHLFPLQDDSTTTN----QNPSTSKDLTLHD 76
           ++ SF LMS  EG  +  +       D      P+ +D + TN    +  S+SKD+    
Sbjct: 32  YNESFGLMSRLEGYDSCISEACLLGSDLVVANIPMAEDESRTNSVNNEAGSSSKDIR--- 91

Query: 77  SATATDKGWLRLSIG---TATPDVVVNHNKHHHHHQQ-------PPGFSFGLTELDLLPS 136
                D+GWL+LSIG   T T     + +KH+HHH Q       P     GL ELDLLP 
Sbjct: 92  --EERDEGWLQLSIGGQTTTTTTPTSHESKHYHHHHQQQQLVLDPTTRRGGLIELDLLPG 151

Query: 137 DSGVVSSKLNESSLGV--VGDFSTTPALVLP---------------------------PP 196
               +S +    S  +  V DF T P  V+                            P 
Sbjct: 152 SISSISHEARPLSTPMFHVPDFRTPPRPVMNIAASHATNFGTTSLFFQHHPAATSSTYPL 211

Query: 197 PPELNWTFRPI--------SSYNPSSSNCSSSFIPFGPYFSTPFQLHPGLDLVAATTAAG 256
             E+NW FRP+        SS +PSSS  SSS +P G YFS PFQ++ G+D+      AG
Sbjct: 212 HQEINWPFRPMLPNIATPSSSSSPSSS--SSSLMPLGSYFSRPFQVNSGMDV------AG 271

Query: 257 SSSDTVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPQRS-SYLRIKDGKMTVRLLIKYL 316
            SSD  RVIDPPRRPHSGIWF LQ  + NQ K+P LPQ S SYLRIKDG+MTVRLL+KYL
Sbjct: 272 PSSD-FRVIDPPRRPHSGIWFLLQASQ-NQTKEPFLPQISKSYLRIKDGRMTVRLLMKYL 331

Query: 317 MKKLRLDNELEIEIRCKGEKLEPCLTMQHIRDTIWCSKDSALTTLLPNSSTIDHIMVLHY 324
           + KL LD+E EIEI C+G++L P LT+QH+RD IW  +D+   TLLP SST DH+MVLHY
Sbjct: 332 VNKLGLDSESEIEITCRGQQLVPFLTLQHVRDNIWSPRDA--LTLLPESSTTDHVMVLHY 374

[Close]

BLAST of ClCG06G001790 vs. NCBI nr
Match: gi|1000980649|ref|XP_015570440.1| (PREDICTED: putative uncharacterized protein DDB_G0277255 isoform X2 [Ricinus communis])

HSP 1 Score: 227.3 bits (578), Expect = 4.1e-56
Identity = 144/335 (42.99%), Postives = 185/335 (55.22%), Query Frame = 1


Query: 31  HNNNNTNHNSHDHHHHLFPLQDDSTTTNQNPSTSKDLTLHDSATATDKGWLRLSIGTATP 90
           +NNNNTN+++              TT N N +T ++          D+GWL+L IG  T 
Sbjct: 94  NNNNNTNNSN--------------TTPNNNNNTREE--------ERDEGWLQLGIGGNTR 153

Query: 91  DVVVNHNKHHHHHQQPPGFSF--GLTELDLLPSDSGVVSSKLNESSLGVVGDFSTTPALV 150
               N +K+ HHH   P  +   GL ELDLLP      S +    S  +    S +P + 
Sbjct: 154 TATHNQSKYQHHHVIDPSGATRGGLIELDLLPGGGSSSSHQGRPLSAPIFHVPSRSPVMN 213

Query: 151 LPPPPP-------------------------ELNWTFR---------PISSYNPSSSNCS 210
           +    P                         E+NW FR         P SS +P+S + S
Sbjct: 214 IAAGAPSFSTSLFFHQHQQPGSGSSIYPHHQEINWAFRHMPHNIAMAPSSSSSPNSQSSS 273

Query: 211 SSFIPFGP-YFSTPFQLHPGLDLVAATTAAGSSSDTVRVIDPPRRPHSGIWFSLQPLELN 270
           SS +P G  YFS PFQ+H           AG SS   RVIDPPRRPHSGIWF+LQ  + N
Sbjct: 274 SSLMPLGSSYFSRPFQVHSS----GGVDVAGPSSSDFRVIDPPRRPHSGIWFTLQASQ-N 333

Query: 271 QGKQPVLPQRS-SYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEIRCKGEKLEPCLTMQH 328
           Q ++P LPQ S SYLRIKDG+MTVRLL+KYL+ KLRLD+E E+EI C+G++L P LT+QH
Sbjct: 334 QAQEPFLPQISKSYLRIKDGRMTVRLLMKYLVNKLRLDSESEVEITCRGQQLLPFLTLQH 393

[Close]

BLAST of ClCG06G001790 vs. NCBI nr
Match: gi|743880262|ref|XP_011036152.1| (PREDICTED: uncharacterized protein LOC105133752 isoform X1 [Populus euphratica])

HSP 1 Score: 223.8 bits (569), Expect = 4.5e-55
Identity = 158/361 (43.77%), Postives = 199/361 (55.12%), Query Frame = 1


Query: 17  FSPSFALMSHFEGCHNN-NNTNHNSHDHHHHLFPLQDDSTTTN----QNPSTSKDLTLHD 76
           ++ SF LMS  EG  +  +       D      P+ +D + TN    +  S+SKD+    
Sbjct: 32  YNESFGLMSRLEGYDSCISEACLLGSDLVVANIPMAEDESRTNSVNNEAGSSSKDIR--- 91

Query: 77  SATATDKGWLRLSIG---TATPDVVVNHNKHHHHHQQ-------PPGFSFGLTELDLLPS 136
                D+GWL+LSIG   T T     + +KH+HHH Q       P     GL ELDLLP 
Sbjct: 92  --EERDEGWLQLSIGGQTTTTTTPTSHESKHYHHHHQQQQLVLDPTTRRGGLIELDLLPG 151

Query: 137 DSGVVSSKLNESSLGV--VGDFSTTPALVLP---------------------------PP 196
               +S +    S  +  V DF T P  V+                            P 
Sbjct: 152 SISSISHEARPLSTPMFHVPDFRTPPRPVMNIAASHATNFGTTSLFFQHHPAATSSTYPL 211

Query: 197 PPELNWTFRPI--------SSYNPSSSNCSSSFIPFGPYFSTPFQLHPGLDLVAATTAAG 256
             E+NW FRP+        SS +PSSS  SSS +P G YFS PFQ++ G+D+      AG
Sbjct: 212 HQEINWPFRPMLPNIATPSSSSSPSSS--SSSLMPLGSYFSRPFQVNSGMDV------AG 271

Query: 257 SSSDTVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPQRS-SYLRIKDGKMTVRLLIKYL 316
            SSD  RVIDPPRRPHSGIWF LQ  + NQ K+P LPQ S SYLRIKDG+MTVRLL+KYL
Sbjct: 272 PSSD-FRVIDPPRRPHSGIWFLLQASQ-NQTKEPFLPQISKSYLRIKDGRMTVRLLMKYL 331

Query: 317 MKKLRLDNELE-IEIRCKGEKLEPCLTMQHIRDTIWCSKDSALTTLLPNSSTIDHIMVLH 324
           + KL LD+E E IEI C+G++L P LT+QH+RD IW  +D+   TLLP SST DH+MVLH
Sbjct: 332 VNKLGLDSESEQIEITCRGQQLVPFLTLQHVRDNIWSPRDA--LTLLPESSTTDHVMVLH 375

The following BLAST results are available for this feature:

BLAST of ClCG06G001790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRIP1_ARATH	1.8e-11	40.37	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1 PE=1 SV=2	[more]
DRIP2_ARATH	6.4e-09	34.19	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana GN=DRIP2 PE=1 SV=1	[more]
DRIPH_ARATH	1.2e-07	28.48	Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana GN=At3g23060 ...	[more]

BLAST of ClCG06G001790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC58_CUCSA	2.2e-165	87.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G091920 PE=4 SV=1	[more]
A0A061E508_THECC	1.2e-54	43.56	RING finger protein, putative OS=Theobroma cacao GN=TCM_008415 PE=4 SV=1	[more]
A0A0D2PVX2_GOSRA	9.5e-52	42.27	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G196300 PE=4 SV=1	[more]
D7U621_VITVI	3.8e-48	44.78	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0146g00510 PE=4 SV=...	[more]
A0A0D2S229_GOSRA	2.7e-46	40.13	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G125300 PE=4 SV=1	[more]

BLAST of ClCG06G001790 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13250.1	1.8e-38	54.07	RING finger protein	[more]
AT1G28080.1	1.5e-19	65.79	RING finger protein	[more]
AT1G06770.1	1.0e-12	40.37	DREB2A-interacting protein 1	[more]
AT2G30580.1	3.6e-10	34.19	DREB2A-interacting protein 2	[more]
AT3G23060.1	6.8e-09	28.48	RING/U-box superfamily protein	[more]

BLAST of ClCG06G001790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445780\|ref\|XP_004140650.1\|	3.2e-165	87.98	PREDICTED: uncharacterized protein LOC101204945 [Cucumis sativus]	[more]
gi\|659119902\|ref\|XP_008459904.1\|	2.3e-163	87.87	PREDICTED: uncharacterized protein LOC103498884 [Cucumis melo]	[more]
gi\|743880266\|ref\|XP_011036153.1\|	1.8e-56	43.89	PREDICTED: uncharacterized protein LOC105133752 isoform X2 [Populus euphratica]	[more]
gi\|1000980649\|ref\|XP_015570440.1\|	4.1e-56	42.99	PREDICTED: putative uncharacterized protein DDB_G0277255 isoform X2 [Ricinus com...	[more]
gi\|743880262\|ref\|XP_011036152.1\|	4.5e-55	43.77	PREDICTED: uncharacterized protein LOC105133752 isoform X1 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G001790.1	ClCG06G001790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10825	RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT	coord: 155..324 score: 1.3
None	No IPR available	PANTHER	PTHR10825:SF23	RING FINGER PROTEIN	coord: 155..324 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G001790	Csa6G091920	Cucumber (Chinese Long) v2	cuwcgB476
ClCG06G001790	MELO3C022349	Melon (DHL92) v3.5.1	mewcgB124
ClCG06G001790	Cla001486	Watermelon (97103) v1	wcgwmB345
ClCG06G001790	Cla97C06G111090	Watermelon (97103) v2	wcgwmbB273
ClCG06G001790	Bhi12G002134	Wax gourd	wcgwgoB491
ClCG06G001790	CSPI06G07430	Wild cucumber (PI 183967)	cpiwcgB503
ClCG06G001790	Cucsa.349270	Cucumber (Gy14) v1	cgywcgB595
ClCG06G001790	CmaCh08G000180	Cucurbita maxima (Rimu)	cmawcgB805
ClCG06G001790	CmaCh17G014080	Cucurbita maxima (Rimu)	cmawcgB322
ClCG06G001790	CmoCh17G013550	Cucurbita moschata (Rifu)	cmowcgB318
ClCG06G001790	Lsi09G017630	Bottle gourd (USVL1VR-Ls)	lsiwcgB029
ClCG06G001790	Cp4.1LG12g09910	Cucurbita pepo (Zucchini)	cpewcgB140
ClCG06G001790	Cp4.1LG08g06320	Cucurbita pepo (Zucchini)	cpewcgB789
ClCG06G001790	CsGy6G007430	Cucumber (Gy14) v2	cgybwcgB438
ClCG06G001790	MELO3C022349.2	Melon (DHL92) v3.6.1	medwcgB119
ClCG06G001790	Carg15427	Silver-seed gourd	carwcgB0669
ClCG06G001790	Carg11567	Silver-seed gourd	carwcgB0013
ClCG06G001790	CsaV3_6G007830	Cucumber (Chinese Long) v3	cucwcgB497

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G001790	Cucurbita moschata (Rifu)	cmowcgB800
ClCG06G001790	Cucurbita pepo (Zucchini)	cpewcgB298
ClCG06G001790	Cucurbita pepo (Zucchini)	cpewcgB564
ClCG06G001790	Silver-seed gourd	carwcgB0956
ClCG06G001790	Wax gourd	wcgwgoB532
ClCG06G001790	Watermelon (Charleston Gray)	wcgwcgB173