CsaV3_6G007830 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G007830
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	E3 ubiquitin protein ligase drip2
Location	chr6 : 6267380 .. 6273275 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTCCCTTCCCTCTCAGTATGGCTGCTATTTGCTTTGAGATCCACCTGATCACATGAACCACAAATGGTTCCTCCTACTTATGCTCCTCCTCCTTCTTCCTTTCCTTTTAATCTCTTCTCTCCAAGTTTTCCTCTCATGAGTCATTTTGAGGGTTTCCATAATAATAACAATAATTCTCATCATCATCAACATCATCTCTTTCCTCTTCAAGATCATGATTCAACAACCAACCAAAACTCTTCTACTTCTAAGGATCTAACTCTTCATGACTCCGCCGTCGTCGCCGATAAGAGTTGGCTTCGTCTTAGCATCGGTGCTACCACCCCTGACGTCGTCGTCCACAACCATCACCACCACCATCACCAACAACCACCAGGGTTTCGCTTTGGCTTGACAGAGGTTGATTTATTACCCTCCGACGGGGTTTCGAAATCGAATGAGTCGTCGTTGGGAGTCGTTGGAAATTTTTCTCCTACTCCGGCGTTGGTTTTGCCTCCACCGCCGCCACCGGAGCTTAATTGGACGTTTAGACCTATTTCATCTCATAACTCTTCTTCTTCTAATTGTTCTTCTTCTTTTATTCCTTTTGGTCCATACTTTTCAACTCCCTTTCAACTCCACCCTGGACTTGATTTAGTCGCTGCCACCGCCGCCGCCGCCGCCGGATCTAGCTCCGATGCTGTTAGGGTTATCGACCCTCCTCGCCGCCCTCATTCTGGGATTTGGTTTTCTCTTCAACCATTGGAATTAAACCAGTAAGAAAACTCAATCTAATTACACCCTCAAATATCTTCTTTACATATTTTGTCACAATCCGTATTTGATTTTCGTTACAATCTTGTACTACTAAAAGATCTTCCATTTTTCTCCGCCTTTTAGTTATTTTTTTTATAAAGTTAATTTGATGATATTTTTTTCTATTTTTGGTTTGATTTTTGCAATGCAGAGGAAAACAACCAGTGTTGCCTCACAGATCCAGCTACTTGAGAATCAAGTATTGATTCCTTTTTTCCTTTTACCTTACTTAGAATTGGATCTTTGTTAATTAACAAAATTAGCATGTGGGTTTTATTTGCAAATGCTTGTTTTTCAAAATTTGAGTATCATTTTACTTGAATTAAGTATAACTCATAATTAATTTTCATCTTTTTGTGAAGGGATGGAAAGATGACAGTTCGATTACTAATCAAGTACTTGATGAAAAAGCTCAGATTGGACAATGAATTAGAGGTATTTATAAAATTTAACTTACTTTGCTGAAATTTCTCAAAATAACGTTTTTGTTCATTTCTTATTCATAAATCAAACTTAAACAACATGAAAGAAACATCACAACCAAAATATACATTTATATAAGAGGGTTTTCTTTTACATTACATTACACTTTACAAAAACACAACAAAAAAACTTGAACTTTTTGTAGTATTAATTTTAGAAATATATGGGTGTGATTGAGAAGAAAAGCTTTTGTCTTGTCGATATCTAGGGAATTGGGTCCTTTTTTTTTTTTTTCTTTCTTTCTTTCTAAAATTTGGGGCACAAGCTTTCATGTCTGGTTCGTTATGGATTTTTTTTTTTGGGTGTTTCTCTTGTAACTTGAAAAAAAAATGGTATAAAGTAAACAAATTCAATTAAAAATGATGGGATTAAATAAAAACAAATACACTAACCAACAACCGCTCCCTTTCCCAAAACCTAGAAGAAAATGAGTATAGAAAAAATAACCTTAAGTTACAATTTAACTATAAACTTAATAAAACTTTGGAAGAAGGGTTGCTATTTTTTTCTATTTTAAGAATGAAAACTACTTTCTTTGTTATTTCATAGCTGTTCATCAACTGTATTTAGCGAACAACCAAAGCAAGAACCTTAAAACAATCGAAAAGACAAAAAAAAGAAGAAAAAGATACAGAAAGTAATAAGTTCTTGGCCAAAACTACTGTTTAACTCATGAAAAGAGTTGTAAAAAATACTCAAATGCCTAGACATAGATGTAGTTAAGTTTATATAGAGTTTAAAGATTGCAGTCTTATTCAATTCTAATAACTTTAGCTGTCTTTATACACATGAATTATTATATAGTTTAGTTATACGTAGCTAAAGTATGTGTATGTTGATTGATAAATGGAGGTTTTATTATATATAGTTTAGTATATGAATGATTTTAAATGGGCAATGAAAAAATTTGTTGCATTATATTGCTTCTTATTTACACTTGATGATGAAATACCCACTATTATATGTCTTCTTCCCTAATAATTGCATTGCCCTAAAAGTTTTCTTCCTACGCATTATAATTTTATTTTTTTAAGTTTTATATTTTTTTTCATTATTTGTGCCTAAAGTTACCTTAGTTTCGCACGAACGCAAGTATTTTTCTCTTTATACATATCACTTATCATATATTTCAAATTTATTTCTACATTCATTTGATCTTTACCAAAATAGCATGCAATTGAAGGGACCCTTTCTTTCTTTTGTTACTATTTCCTCCCCTTTTTATTTCATTTGCAATCCATGCATATTCTTAATTTAATTTCTTTTGGGTTTTAAAAGAGGAAAAAAAGGGTTATTAAATCATGTCTTGTGAAAAACTCCTCAATTCTTCTGTCCTTTTGCACGTTTAGTGATTTCTTGATTATTTGTGATCGTTGTCCCTTTTTTTTCTTATTGGTTCTAAAACTTAGTTTGGATTTTGAAAATGTGGGAGATAAGTTGATTATAAAACTCAAGAACTTCTTGTTTTAGTTGTTTAGTCATAAACTTAACTTAAGGAAGACAAATGATTGATCAAACTATATCTTAATTGTGGAGGATTGGTTTAATTATAAGGTGATTGACGTTTTTATTTTATTTTATTACTAGTGATGTTTTGAACTTTTGAAGGTGATATTTGTAATCCTAATTAAAGAGAGAATTATACATGTAATTTAGAAGAAACATGCATGCATGACCATGTGATGTAATACATACACGCACAAACACACATGTTTAGTTTATTCCCCATGATCATAATGATGCTTGAATTGAGGTTTGTTCTTAAATGGGTAATTTATAAAAGCATCAAACCAAAAATGAGACAAACTTGAGCTAATATAATGTATATTATGTGTTTTTTTTTAAAAAAAAGGACTAGTATTTTTTTTAATTAATTCAAAGATTATCCAATCATATCCAAAAGAAAACTAAATAAGTTTATGTTGTATGAGATTTTATATATTATATGCATTCATTCTTTCGACATGGCTACTATACCCTTGAGACAACAATATTTGAGGATAGAAAATAATGAAGGAAGGATCATTACATTTGTCTTTATTAACAAAATTAAATTTCTTAATTATTATGTGTATACATATGTTGATGTCAAGCCAGCTGTCCCTTAGTTTTATTAAAAATTATAACACATATGTATGATTAGTGAGGATTATGTATGTGACATACCCAGACATTCCATTTGATTAAACTACTCATAAACCTGTATGTAAACATTATTATTGTTTAATTAGCAGTCAACTCTAATTATTGATTTATTAATAATGCATACAGTTTTTGTTTTCTGTTGTTGGTCTTATTGCATGCTCTTCATGTCATGAACAGACAGCTATTGGATTGCCTTATTCTATTCATAGCGTGAAAGAGAGAGATAGAAGACTTAGGATGGTTGACTAATTAGGATTAAATCACTTTCTTAATTCTCAACCCACAATAATGTATATTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCTCAACCCACAATAGAAAAATGCAAAAGAAAAACTCAAGTCCCCTGCTGAAGGTATAGTATTTTTATAATTCTTCCTCATAAACTTCAGGTAAAATGTGTATACTAAAACAAATAAATCCTAATGAATAAGTTGAACTTCACCCATTTACATAACACACTCAAATCTAAACTTAAACCTCAATTATTGGTTAATACATTTTGGACATAACTTTGAGTTGACTTATATTAATCACATAGTAAAGTCTGATTATTTGTTTTTTTTTTTAATGATCATTGTGGTGATTCATTTTCATTGGTTTGTTTATGTTGTGTTTAATTAGGTAACAATAATGCAATTGATTAGTTAGTTGGGGTTTGTTGTTATTGGTGCGTAGAGCAGCCTAGGTTTTTTATTCTATGAACATTAATTAGACAATAGATTATCATATAGTTTATGTTTCTTATTATATATTGAAGTGAATAATGGATATATATGTTTATATTGGTATGTATTTTAGGTCAGAATAAATAATAATATAAGCTTTGGCTGAATCCATAGTATTTTTATAATTTTATATTTCTACGTGCCAACTACGTATTTTATATAAGGATTGGACAGCATATGCATGGAAAATGCTCATGGTTTTCTTTTTCTTTTTCTTTTGAAAAATACAAATGATCGAATTAAATTGTGAAAAAAGAAAGAAAGAAAAAAGGTGGTGGTGAAGTAGAAGGGAAGGGATGAGATGAGATGAAAGATCATCATCGTAGGGCCAGGAAAATCCCACGTGGTGTATAATCTTATTACCTACAACCTTCCATGGATTGACTATTCCTCATTTTCTTACGTCATGCTTTCGTCTTTCCCACCTCACCATCTTCTTCTTCTTCTTTCCATTTCCATTTGCTGATTTCTTTTCCTTCAAAAGTTTCAATCAAAACCTTTCTCTCTCTAGTGTGTTTTTCTCATCTAACCAATAACATTGGAGAGAGATAACAATAACAATAATAATAATAGGATGGAATGATTCATGGGTCGTTGAAAATAAACATGAGGAATAATATTGTATATTATATATATATATAAAAACTCATATCAACACAATAATTAAGGAGGAGAAAAGTTTAGGGTTGGATTTATTTATAAACTTTAAATTTGATGGAAAAAGAAAAGGAGAAAAAGAGGAATATATTTGAGGAATTAGGAATGTGAAAGAGACATGCATGAGCATGAGATGAAGATTTTGATGATACGAAGTGGGGAATGGGCGCAATATATATTGAGGTTGGTGGGTCCTTTTATTCATTAGGGTTTCGGTCACCCTCTCTCTTTTCTTTTTCCTTTTCTGCTGCCCCGGGCAGCGGCGATACCGTCTCGCAACTCATCAATTCAACCCTACCCATATTAGCTTCAACTTGTTTTTCAACTCAACCCTACCCATATTAGCTTCAACTTGTTTTTAAAAGCTATTTTATCTTTTACAACTTTTTATATTTATCGAGTAATTGTATTTTACGAATATAACTTTGATTTACTAACTCTAGACTTATAAAGTTGTTGTAAATAAAGTTTTACGTACAGTGAGTTCATCGTTTAATTCTTGATTTAGATTATTGACGGTATTTTTTTTTCTTTTTTTCAGATTGAGATGAGATGTAGAGGGGAAAAGCTTGAAGGTTGCTTGACAATGCAGCATATTAGGGATAAAATTTGGTGCTCTAAAGACTCAGCTCTTACCACTTTGCTTCCAAATTCCTCAACTATTGATCACATTATGGTTCTTCACTATGCCATTATTCCTCCAACCCCTAATTCTCCTAATTCTCCTTCTTAATTAATTCCTATAATATATAATCCCATTGTTATCATCATATTATATCATTATTATTTCTCTAATTAATCTAGATATATCTAATCTCTTTTTCACTCCTTCAGTTTCTTTTTATCCCAACATCCAAATATATATCCCTAAGCTAGGAATAGGATGGATTTTCTGACTTTAATTGATTTACATTATACTCTTTACCCCTCCACACACCATCCCTTTCTTAGTTTAGGAATTAAATTATGATCATATCACATCCCCACCTTTTCATCTTAATTGTAATTATCGTTTTCTCATCTATAATCCAACTTGTCTTTTCTCCAAACATTCTTC

mRNA sequence

ATGGTTCCTCCTACTTATGCTCCTCCTCCTTCTTCCTTTCCTTTTAATCTCTTCTCTCCAAGTTTTCCTCTCATGAGTCATTTTGAGGGTTTCCATAATAATAACAATAATTCTCATCATCATCAACATCATCTCTTTCCTCTTCAAGATCATGATTCAACAACCAACCAAAACTCTTCTACTTCTAAGGATCTAACTCTTCATGACTCCGCCGTCGTCGCCGATAAGAGTTGGCTTCGTCTTAGCATCGGTGCTACCACCCCTGACGTCGTCGTCCACAACCATCACCACCACCATCACCAACAACCACCAGGGTTTCGCTTTGGCTTGACAGAGGTTGATTTATTACCCTCCGACGGGGTTTCGAAATCGAATGAGTCGTCGTTGGGAGTCGTTGGAAATTTTTCTCCTACTCCGGCGTTGGTTTTGCCTCCACCGCCGCCACCGGAGCTTAATTGGACGTTTAGACCTATTTCATCTCATAACTCTTCTTCTTCTAATTGTTCTTCTTCTTTTATTCCTTTTGGTCCATACTTTTCAACTCCCTTTCAACTCCACCCTGGACTTGATTTAGTCGCTGCCACCGCCGCCGCCGCCGCCGGATCTAGCTCCGATGCTGTTAGGGTTATCGACCCTCCTCGCCGCCCTCATTCTGGGATTTGGTTTTCTCTTCAACCATTGGAATTAAACCAAGGAAAACAACCAGTGTTGCCTCACAGATCCAGCTACTTGAGAATCAAGGATGGAAAGATGACAGTTCGATTACTAATCAAGTACTTGATGAAAAAGCTCAGATTGGACAATGAATTAGAGATTGAGATGAGATGTAGAGGGGAAAAGCTTGAAGGTTGCTTGACAATGCAGCATATTAGGGATAAAATTTGGTGCTCTAAAGACTCAGCTCTTACCACTTTGCTTCCAAATTCCTCAACTATTGATCACATTATGGTTCTTCACTATGCCATTATTCCTCCAACCCCTAATTCTCCTAATTCTCCTTCTTAA

Coding sequence (CDS)

ATGGTTCCTCCTACTTATGCTCCTCCTCCTTCTTCCTTTCCTTTTAATCTCTTCTCTCCAAGTTTTCCTCTCATGAGTCATTTTGAGGGTTTCCATAATAATAACAATAATTCTCATCATCATCAACATCATCTCTTTCCTCTTCAAGATCATGATTCAACAACCAACCAAAACTCTTCTACTTCTAAGGATCTAACTCTTCATGACTCCGCCGTCGTCGCCGATAAGAGTTGGCTTCGTCTTAGCATCGGTGCTACCACCCCTGACGTCGTCGTCCACAACCATCACCACCACCATCACCAACAACCACCAGGGTTTCGCTTTGGCTTGACAGAGGTTGATTTATTACCCTCCGACGGGGTTTCGAAATCGAATGAGTCGTCGTTGGGAGTCGTTGGAAATTTTTCTCCTACTCCGGCGTTGGTTTTGCCTCCACCGCCGCCACCGGAGCTTAATTGGACGTTTAGACCTATTTCATCTCATAACTCTTCTTCTTCTAATTGTTCTTCTTCTTTTATTCCTTTTGGTCCATACTTTTCAACTCCCTTTCAACTCCACCCTGGACTTGATTTAGTCGCTGCCACCGCCGCCGCCGCCGCCGGATCTAGCTCCGATGCTGTTAGGGTTATCGACCCTCCTCGCCGCCCTCATTCTGGGATTTGGTTTTCTCTTCAACCATTGGAATTAAACCAAGGAAAACAACCAGTGTTGCCTCACAGATCCAGCTACTTGAGAATCAAGGATGGAAAGATGACAGTTCGATTACTAATCAAGTACTTGATGAAAAAGCTCAGATTGGACAATGAATTAGAGATTGAGATGAGATGTAGAGGGGAAAAGCTTGAAGGTTGCTTGACAATGCAGCATATTAGGGATAAAATTTGGTGCTCTAAAGACTCAGCTCTTACCACTTTGCTTCCAAATTCCTCAACTATTGATCACATTATGGTTCTTCACTATGCCATTATTCCTCCAACCCCTAATTCTCCTAATTCTCCTTCTTAA

Protein sequence

MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHNNNNNSHHHQHHLFPLQDHDSTTNQNSSTSKDLTLHDSAVVADKSWLRLSIGATTPDVVVHNHHHHHHQQPPGFRFGLTEVDLLPSDGVSKSNESSLGVVGNFSPTPALVLPPPPPPELNWTFRPISSHNSSSSNCSSSFIPFGPYFSTPFQLHPGLDLVAATAAAAAGSSSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNSPNSPS

Homology

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BLAST of CsaV3_6G007830 vs. NCBI nr
Match: XP_004140650.1 (PREDICTED: uncharacterized protein LOC101204945 [Cucumis sativus] >KGN46419.1 hypothetical protein Csa_6G091920 [Cucumis sativus])

HSP 1 Score: 541.6 bits (1394), Expect = 1.9e-150
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXNQNSS 60
           MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXNQNSS
Sbjct: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXNQNSS 60

Query: 61  TSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDG 120
           TSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDG
Sbjct: 61  TSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDG 120

Query: 121 VSKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPYFS 180
           VSKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPYFS
Sbjct: 121 VSKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPYFS 180

Query: 181 TPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR 240
           TPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR
Sbjct: 181 TPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR 240

Query: 241 SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS 300
           SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS
Sbjct: 241 SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS 300

Query: 301 ALTTLLPNSSTIDHIMVLHYAIIPPTPNSPNSPS 335
           ALTTLLPNSSTIDHIMVLHYAIIPPTPNSPNSPS
Sbjct: 301 ALTTLLPNSSTIDHIMVLHYAIIPPTPNSPNSPS 334

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BLAST of CsaV3_6G007830 vs. NCBI nr
Match: XP_008459904.1 (PREDICTED: uncharacterized protein LOC103498884 [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 4.3e-134
Identity = 297/326 (91.10%), Postives = 300/326 (92.02%), Query Frame = 0


Query: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXNQNSS 60
           MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  TSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDG 120
              DLTLHDSA VADK WLRLS+GAT XXXXXXXXXXXXXXXXXGFR GLTE+DLLPSDG
Sbjct: 61  XXXDLTLHDSAAVADKGWLRLSVGAT-XXXXXXXXXXXXXXXXXGFRLGLTELDLLPSDG 120

Query: 121 VSKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPYFS 180
           VSKSNESSLGVVGNFSP+PALV   XX   LNWTFRPISSHNSSSSNCSSSFIPFGPYFS
Sbjct: 121 VSKSNESSLGVVGNFSPSPALVLPPXXPAELNWTFRPISSHNSSSSNCSSSFIPFGPYFS 180

Query: 181 TPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR 240
           TPFQLHPGLDLVAATA       S AVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR
Sbjct: 181 TPFQLHPGLDLVAATA-AAAGSSSGAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR 240

Query: 241 SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS 300
           SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS
Sbjct: 241 SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS 300

Query: 301 ALTTLLPNSSTIDHIMVLHYAIIPPT 327
           ALTTLLPNSSTIDHIMVLHYAIIPPT
Sbjct: 301 ALTTLLPNSSTIDHIMVLHYAIIPPT 324

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BLAST of CsaV3_6G007830 vs. NCBI nr
Match: XP_022953329.1 (protein LAX PANICLE 2-like [Cucurbita moschata])

HSP 1 Score: 328.9 bits (842), Expect = 1.9e-86
Identity = 189/273 (69.23%), Postives = 206/273 (75.46%), Query Frame = 0


Query: 60  STSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSD 119
           S SKD  LHD+    D+ WLRLSIGA                   GFRFGLTE+DLL   
Sbjct: 63  SASKDRPLHDT---PDEGWLRLSIGAA----TPDVVVHRHRPQPPGFRFGLTELDLLSPA 122

Query: 120 GV-SKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPY 179
           G+ SK +ESS   VG+ SP   L         LNWTFRPISSHN SSSNCSSS +P+GPY
Sbjct: 123 GLGSKGHESS--SVGDSSPGMVLA---QPPPELNWTFRPISSHNPSSSNCSSSSLPYGPY 182

Query: 180 FSTPFQLHPGLDLVA--ATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPV 239
           FSTPFQLHPGLDLVA     XXXXXXX   +RVIDPPRRPHSGIWFSLQ  E NQGKQP 
Sbjct: 183 FSTPFQLHPGLDLVAXXXXXXXXXXXXXXXIRVIDPPRRPHSGIWFSLQASESNQGKQPA 242

Query: 240 LPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWC 299
           LP RSSYLRIKDG+MTVRLLIKYL+KKLRLDNE EIE+RCRGEK+EGCLTMQH+RD IWC
Sbjct: 243 LPQRSSYLRIKDGRMTVRLLIKYLVKKLRLDNESEIEIRCRGEKVEGCLTMQHVRDTIWC 302

Query: 300 SKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNS 330
           SKDS LTTLLPNSST+DHIMVLHYAI+ PTP+S
Sbjct: 303 SKDSTLTTLLPNSSTMDHIMVLHYAIL-PTPHS 322

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BLAST of CsaV3_6G007830 vs. NCBI nr
Match: XP_022992476.1 (protein LAX PANICLE 2-like [Cucurbita maxima])

HSP 1 Score: 326.6 bits (836), Expect = 9.7e-86
Identity = 186/277 (67.15%), Postives = 203/277 (73.29%), Query Frame = 0


Query: 57  QNSSTSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLL 116
           Q  S  KD  LHD+    D+ WLRLSIGA                   GFRFGLTE+DLL
Sbjct: 58  QTPSAPKDRPLHDT---PDEGWLRLSIGAA----TPDVVVHHHRPQPPGFRFGLTELDLL 117

Query: 117 PSDGV-SKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPF 176
              G+ SK +ESS   VG+ SP   L         LNWTFRPISSHN SSSNCSSS +P+
Sbjct: 118 SPGGLSSKGHESS--SVGDSSPGMVLA---QPPPELNWTFRPISSHNPSSSNCSSSSLPY 177

Query: 177 GPYFSTPFQLHPGLDLV---AATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQG 236
           GPYFSTPFQLHPGLDLV       XXXXXXX   +RV+DPPR PHSGIWFSLQP E NQG
Sbjct: 178 GPYFSTPFQLHPGLDLVXXXXXXXXXXXXXXXXXIRVVDPPRSPHSGIWFSLQPWESNQG 237

Query: 237 KQPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRD 296
           KQP LP RSSYLRIKDG+MTVRLLIKYL+KKLRLDNE EIE+RCRGEK+EGCLTMQH+RD
Sbjct: 238 KQPALPQRSSYLRIKDGRMTVRLLIKYLVKKLRLDNESEIEIRCRGEKVEGCLTMQHVRD 297

Query: 297 KIWCSKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNS 330
            IWCSKDS LTTLLPNSSTIDHIMVLHYAI+P   +S
Sbjct: 298 TIWCSKDSTLTTLLPNSSTIDHIMVLHYAILPTLDSS 322

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BLAST of CsaV3_6G007830 vs. NCBI nr
Match: XP_023549028.1 (protein LAX PANICLE 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.6 bits (836), Expect = 9.7e-86
Identity = 188/273 (68.86%), Postives = 205/273 (75.09%), Query Frame = 0


Query: 60  STSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSD 119
           S SKD  LHD+    D+ WLRLSIGA                   GFRFGLTE+DLL   
Sbjct: 62  SASKDRPLHDT---PDEGWLRLSIGAA----TPDVVVHRHRPQPPGFRFGLTELDLLSPA 121

Query: 120 GV-SKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPY 179
           G+ SK +ESS   VG+ SP   L         LNWTFRPISSHN SSSNCSSS +P+GPY
Sbjct: 122 GLGSKGHESS--SVGDSSPGMVLA---QPPPELNWTFRPISSHNPSSSNCSSSSLPYGPY 181

Query: 180 FSTPFQLHPGLDLVA--ATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPV 239
           FSTPFQLHPGLDLVA     XXXXXXX   +RVIDPPRRPHSGIWFSLQ  E NQGKQP 
Sbjct: 182 FSTPFQLHPGLDLVAXXXXXXXXXXXXXXXIRVIDPPRRPHSGIWFSLQASESNQGKQPA 241

Query: 240 LPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWC 299
           LP RSSYLRIKDG+MTVRLLIKYL+KKLRLD E EIE+RCRGEK+EGCLTMQH+RD IWC
Sbjct: 242 LPQRSSYLRIKDGRMTVRLLIKYLVKKLRLDKESEIEIRCRGEKVEGCLTMQHVRDTIWC 301

Query: 300 SKDSALTTLLPNSSTIDHIMVLHYAIIPPTPNS 330
           SKDS LTTLLPNSST+DHIMVLHYAI+ PTP+S
Sbjct: 302 SKDSTLTTLLPNSSTMDHIMVLHYAIL-PTPHS 321

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BLAST of CsaV3_6G007830 vs. TAIR10
Match: AT5G13250.1 (RING finger protein)

HSP 1 Score: 145.2 bits (365), Expect = 7.2e-35
Identity = 91/175 (52.00%), Postives = 112/175 (64.00%), Query Frame = 0


Query: 155 FRPISSHNSSSSNCSSSFIP-FGPYFS-TPFQLHPGLDLVAATAXXXXXXXSDAVRVIDP 214
           F P +    SSS+  S  +P  G YF  + FQ      L+           S ++RVIDP
Sbjct: 213 FVPQNLTQPSSSSSGSLMMPLMGQYFGRSSFQ----PQLIGNDNPDGVAGPSSSLRVIDP 272

Query: 215 PRRPHSGIWFSLQPLELNQGKQPVLPH-RSSYLRIKDGKMTVRLLIKYLMKKLRLDNE-L 274
           PRRPHSGIWF LQ  + NQ  +P LP    SYLRIKDGKMTVRLL+KYL+ KLRL++E  
Sbjct: 273 PRRPHSGIWFLLQASQ-NQTVEPFLPQIPKSYLRIKDGKMTVRLLMKYLVNKLRLEHESQ 332

Query: 275 EIEMRCRGEKLEGCLTMQHIRDKIW-----CSKDSALTTLLPNSSTIDHIMVLHY 321
           ++E+RCRG++LE  LT+QH+RD IW      S  S   TLLPNSST DH+MVLHY
Sbjct: 333 QVEIRCRGQELEPVLTLQHVRDAIWRGSRDTSSLSQNITLLPNSSTSDHLMVLHY 382

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BLAST of CsaV3_6G007830 vs. TAIR10
Match: AT1G28080.1 (RING finger protein)

HSP 1 Score: 89.0 bits (219), Expect = 6.2e-18
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 204 SDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPH-RSSYLRIKDGKMTVRLLIKYLMK 263
           S   RV+DPPRRPHSG+WF LQ  +  Q ++P LP    SYLRIKDG++TVRLLIKYLMK
Sbjct: 221 SSEFRVLDPPRRPHSGLWFLLQASQF-QEREPFLPQVNKSYLRIKDGRITVRLLIKYLMK 280

Query: 264 KLRLDNELEIEM 275
           KL LD+E E+ +
Sbjct: 281 KLELDSESEVNI 291

[Close]

BLAST of CsaV3_6G007830 vs. TAIR10
Match: AT1G06770.1 (DREB2A-interacting protein 1)

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-11
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 215 RPHSGIWFSLQPLELNQGKQPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEM 274
           R +  +WFSL      +G   +    +++LRI+DG  TV  + KYLM+KL L++E EIE+
Sbjct: 306 RRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEI 365

Query: 275 RCRGEKLEGCLTMQHIRDKIWCSKDS--ALTTLLPNSSTIDHIMVLHYA 322
           +C GE +   LT+ ++ D +W  K S       L  SS  D  MVL YA
Sbjct: 366 KCMGEAVIPTLTLYNLVD-LWLQKSSNHQRFAALVGSSAKDFTMVLVYA 413

[Close]

BLAST of CsaV3_6G007830 vs. TAIR10
Match: AT2G30580.1 (DREB2A-interacting protein 2)

HSP 1 Score: 57.0 bits (136), Expect = 2.6e-08
Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 215 RPHSGIWFSLQPLELNQGKQPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEM 274
           R +  +WFSL      +G+  +    ++YLRI+DG + V  + KYLM+KL L +E E+E+
Sbjct: 305 RRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEI 364

Query: 275 RCRGEKLEGCLTMQHIRDKIWCSKDSALTTLLPN--SSTIDHIMVLHYAIIPPTPNS 330
            C GE +   L +  + D +W    S    +  +  SS  + +MVL Y+   P  N+
Sbjct: 365 TCMGEPVIPTLQLHSLVD-LWLETTSKHQRVAASIGSSAKEFVMVLVYSRKLPECNN 420

[Close]

BLAST of CsaV3_6G007830 vs. TAIR10
Match: AT3G23060.1 (RING/U-box superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.6e-08
Identity = 36/110 (32.73%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 215 RPHSGIWFSLQPLELNQGKQPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEM 274
           R ++ +WFSL+P +    +  + P  +  +R+KD  MTV  L KYLM KL L++E ++E+
Sbjct: 360 RNNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEI 419

Query: 275 RCRGEKLEGCLTMQHIRDKIWCSKDSAL---TTLLPNSSTIDHIMVLHYA 322
             R E +   LT+ ++ D  W  + + L    + +  SS  + IM L+Y+
Sbjct: 420 WLRDEPVCSSLTLHNLVD--WWVQTTPLPERQSAMVGSSAAEFIMDLYYS 467

[Close]

BLAST of CsaV3_6G007830 vs. Swiss-Prot
Match: sp|G3XKQ9|LAX2_ORYSJ (Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-22
Identity = 57/111 (51.35%), Postives = 75/111 (67.57%), Query Frame = 0


Query: 218 SGIWFSLQPLELNQGKQPVLPH-RSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRC 277
           +G+WF LQ   L QG++P LP    SYLRIKDG++TVRLL KYL+ KL L++E E+E+ C
Sbjct: 285 AGVWFVLQAAPL-QGREPFLPQIPRSYLRIKDGRVTVRLLTKYLVNKLGLEDESEVEITC 344

Query: 278 RGEKLEGCLTMQHIRDKIWCSKDSALTTLLPNSSTID---HIMVLHYAIIP 325
           RG +L   LT+QH+RD IWC +D+   +  P+  T D   HIMVL Y   P
Sbjct: 345 RGRQLLPILTLQHVRDSIWCRRDAVSPSAAPDIPTADHHQHIMVLQYGRRP 394

[Close]

BLAST of CsaV3_6G007830 vs. Swiss-Prot
Match: sp|Q9M9Y4|DRIP1_ARATH (E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 5.9e-10
Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 215 RPHSGIWFSLQPLELNQGKQPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEM 274
           R +  +WFSL      +G   +    +++LRI+DG  TV  + KYLM+KL L++E EIE+
Sbjct: 306 RRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLESENEIEI 365

Query: 275 RCRGEKLEGCLTMQHIRDKIWCSKDS--ALTTLLPNSSTIDHIMVLHYA 322
           +C GE +   LT+ ++ D +W  K S       L  SS  D  MVL YA
Sbjct: 366 KCMGEAVIPTLTLYNLVD-LWLQKSSNHQRFAALVGSSAKDFTMVLVYA 413

[Close]

BLAST of CsaV3_6G007830 vs. Swiss-Prot
Match: sp|Q94AY3|DRIP2_ARATH (E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.7e-07
Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 215 RPHSGIWFSLQPLELNQGKQPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEM 274
           R +  +WFSL      +G+  +    ++YLRI+DG + V  + KYLM+KL L +E E+E+
Sbjct: 305 RRNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEI 364

Query: 275 RCRGEKLEGCLTMQHIRDKIWCSKDSALTTLLPN--SSTIDHIMVLHYAIIPPTPNS 330
            C GE +   L +  + D +W    S    +  +  SS  + +MVL Y+   P  N+
Sbjct: 365 TCMGEPVIPTLQLHSLVD-LWLETTSKHQRVAASIGSSAKEFVMVLVYSRKLPECNN 420

[Close]

BLAST of CsaV3_6G007830 vs. Swiss-Prot
Match: sp|Q9LS86|DRIPH_ARATH (Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At3g23060 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.7e-07
Identity = 36/110 (32.73%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 215 RPHSGIWFSLQPLELNQGKQPVLPHRSSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEM 274
           R ++ +WFSL+P +    +  + P  +  +R+KD  MTV  L KYLM KL L++E ++E+
Sbjct: 360 RNNNPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEI 419

Query: 275 RCRGEKLEGCLTMQHIRDKIWCSKDSAL---TTLLPNSSTIDHIMVLHYA 322
             R E +   LT+ ++ D  W  + + L    + +  SS  + IM L+Y+
Sbjct: 420 WLRDEPVCSSLTLHNLVD--WWVQTTPLPERQSAMVGSSAAEFIMDLYYS 467

[Close]

BLAST of CsaV3_6G007830 vs. TrEMBL
Match: tr|A0A0A0KC58|A0A0A0KC58_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091920 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 1.3e-150
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXNQNSS 60
           MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXNQNSS
Sbjct: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXNQNSS 60

Query: 61  TSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDG 120
           TSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDG
Sbjct: 61  TSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDG 120

Query: 121 VSKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPYFS 180
           VSKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPYFS
Sbjct: 121 VSKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPYFS 180

Query: 181 TPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR 240
           TPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR
Sbjct: 181 TPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR 240

Query: 241 SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS 300
           SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS
Sbjct: 241 SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS 300

Query: 301 ALTTLLPNSSTIDHIMVLHYAIIPPTPNSPNSPS 335
           ALTTLLPNSSTIDHIMVLHYAIIPPTPNSPNSPS
Sbjct: 301 ALTTLLPNSSTIDHIMVLHYAIIPPTPNSPNSPS 334

[Close]

BLAST of CsaV3_6G007830 vs. TrEMBL
Match: tr|A0A1S3CBC6|A0A1S3CBC6_CUCME (uncharacterized protein LOC103498884 OS=Cucumis melo OX=3656 GN=LOC103498884 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.8e-134
Identity = 297/326 (91.10%), Postives = 300/326 (92.02%), Query Frame = 0


Query: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXNQNSS 60
           MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 1   MVPPTYAPPPSSFPFNLFSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  TSKDLTLHDSAVVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDG 120
              DLTLHDSA VADK WLRLS+GAT XXXXXXXXXXXXXXXXXGFR GLTE+DLLPSDG
Sbjct: 61  XXXDLTLHDSAAVADKGWLRLSVGAT-XXXXXXXXXXXXXXXXXGFRLGLTELDLLPSDG 120

Query: 121 VSKSNESSLGVVGNFSPTPALVXXXXXXXXLNWTFRPISSHNSSSSNCSSSFIPFGPYFS 180
           VSKSNESSLGVVGNFSP+PALV   XX   LNWTFRPISSHNSSSSNCSSSFIPFGPYFS
Sbjct: 121 VSKSNESSLGVVGNFSPSPALVLPPXXPAELNWTFRPISSHNSSSSNCSSSFIPFGPYFS 180

Query: 181 TPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR 240
           TPFQLHPGLDLVAATA       S AVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR
Sbjct: 181 TPFQLHPGLDLVAATA-AAAGSSSGAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHR 240

Query: 241 SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS 300
           SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS
Sbjct: 241 SSYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDS 300

Query: 301 ALTTLLPNSSTIDHIMVLHYAIIPPT 327
           ALTTLLPNSSTIDHIMVLHYAIIPPT
Sbjct: 301 ALTTLLPNSSTIDHIMVLHYAIIPPT 324

[Close]

BLAST of CsaV3_6G007830 vs. TrEMBL
Match: tr|A0A2C9VGC4|A0A2C9VGC4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G102600 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.3e-43
Identity = 127/342 (37.13%), Postives = 166/342 (48.54%), Query Frame = 0


Query: 18  FSPSFPLMSHFEGFHXXXXXXXXXXXXXXXXXXXXXXXNQNS------STSKDLTLHDSA 77
           FS SF +MS  EG+                          NS      S+SKD    D  
Sbjct: 34  FSDSFGVMSRLEGYDYCSSEACLGSDLVPNPPMAEDESRTNSLNEPAGSSSKDNIQED-- 93

Query: 78  VVADKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDGVSKSNESS--- 137
              D+ WL+LSIG                      R GL E+DLLP     +    S   
Sbjct: 94  --RDEGWLQLSIGGRTTSHESKHDHHHHQLDQTATRGGLIELDLLPGSTSHQGRPLSSPI 153

Query: 138 --------------LGVVGNFSPTPALV--------XXXXXXXXLNWTFRPISSHNSSSS 197
                         + + G  S T  L                 +NW FRP++ + + +S
Sbjct: 154 FHVPAEFRAPARPLMSIAGGSSYTTTLFFQHQQGSSSTYPHPQDINWAFRPMTHNIAMAS 213

Query: 198 ------NCSSSFIPFGPYFSTPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGI 257
                       +P G YFS PFQ+H G+D+            S   RVIDPP+RPHSGI
Sbjct: 214 XXXXXXXXXXXLMPLGSYFSRPFQVHSGIDVAG---------PSSDFRVIDPPKRPHSGI 273

Query: 258 WFSLQPLELNQGKQPVLPHRS-SYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGE 317
           WF+LQ  + NQ ++P LP  S SYLRIKDGKMTVRL++KYL+ KLRLD+E E+E+ CRG+
Sbjct: 274 WFTLQASQ-NQAQEPFLPQISKSYLRIKDGKMTVRLIMKYLVNKLRLDSESEVEITCRGQ 333

Query: 318 KLEGCLTMQHIRDKIWCSKDSALTTLLPNSSTIDHIMVLHYA 322
           +L   LT+QH+RD IW  ++  + TLLP+SST DH+MVLHYA
Sbjct: 334 QLLPFLTLQHVRDNIWSPREGGV-TLLPHSSTTDHVMVLHYA 360

[Close]

BLAST of CsaV3_6G007830 vs. TrEMBL
Match: tr|A0A2C9VBZ9|A0A2C9VBZ9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G186300 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.3e-42
Identity = 116/286 (40.56%), Postives = 155/286 (54.20%), Query Frame = 0


Query: 75  DKSWLRLSIGATXXXXXXXXXXXXXXXXXXGFRFGLTEVDLLPSDGVSK----------- 134
           D+ WL+LSIG                      R GL E+DLLP    S+           
Sbjct: 97  DEGWLQLSIGGHTTSHESKHHQVDPTTT----RVGLMELDLLPGSSTSQQGRPFSAPIFH 156

Query: 135 --------SNESSLGVVGNFS--PTPAL---------VXXXXXXXXLNWTFRPISSH--- 194
                   S    + + G  S   T +L                  +NW FRP++ +   
Sbjct: 157 VPADEFRASTRPLMSIAGGSSSYTTTSLFFQHQPGTSTYPPYRHQEINWAFRPMAQNIAT 216

Query: 195 NSSSSNCSSSFIPFGPYFSTPFQLHPGLDLVAATAXXXXXXXSDAVRVIDPPRRPHSGIW 254
            +SS + SS  +P G Y S PFQ+H G+D+            S   R+IDPPR PHSGIW
Sbjct: 217 MASSQSSSSPLMPMGSYLSRPFQVHSGIDVAG---------PSSDFRIIDPPRSPHSGIW 276

Query: 255 FSLQPLELNQGKQPVLPHRS-SYLRIKDGKMTVRLLIKYLMKKLRLDNELEIEMRCRGEK 314
           F+LQ  ++ Q ++P+LP  S SYLRIKDG+MTVRLL+KYL+ KL+LD+E E+E+RCRG++
Sbjct: 277 FTLQASQI-QNQEPLLPQISKSYLRIKDGRMTVRLLMKYLVNKLKLDSESEVEIRCRGQQ 336

Query: 315 LEGCLTMQHIRDKIWCS--KDSALTTLLPNSSTIDHIMVLHYAIIP 325
           L+  LTMQH+RD IW    +D  L TLLP+SST DH+MVLHY+  P
Sbjct: 337 LQPYLTMQHVRDSIWSQSPRDEQL-TLLPHSSTADHVMVLHYSRTP 367

[Close]

BLAST of CsaV3_6G007830 vs. TrEMBL
Match: tr|A0A2K2BT93|A0A2K2BT93_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G062700v3 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.8e-41
Identity = 98/177 (55.37%), Postives = 122/177 (68.93%), Query Frame = 0


Query: 151 LNWTFRPI------SSHNSSSSNCSSSFIPFGPYFSTPFQLHPGLDLVAATAXXXXXXXS 210
           +NW FRP+      +S + S S+ SSS +P G YFS PFQ++ G+D+            S
Sbjct: 212 INWPFRPMLHNIATASSSYSPSSSSSSLMPLGSYFSRPFQVNSGMDVAG---------PS 271

Query: 211 DAVRVIDPPRRPHSGIWFSLQPLELNQGKQPVLPHRS-SYLRIKDGKMTVRLLIKYLMKK 270
              RVIDPPRRPHSGIWF LQ  + NQ K+P LP  S SYLRIKDG+MTVRLL+KYL+ K
Sbjct: 272 SDFRVIDPPRRPHSGIWFLLQASQ-NQTKEPFLPQISKSYLRIKDGRMTVRLLMKYLVNK 331

Query: 271 LRLDNELEIEMRCRGEKLEGCLTMQHIRDKIWCSKDSALTTLLPNSSTIDHIMVLHY 321
           L LD+E EIE+ CRG++L   LT+QH+RD IW  +D+   TLLP SST DH+MVLHY
Sbjct: 332 LGLDSESEIEITCRGQQLVPFLTLQHVRDNIWSPRDA--LTLLPESSTTDHVMVLHY 376

The following BLAST results are available for this feature:

BLAST of CsaV3_6G007830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140650.1	1.9e-150	100.00	PREDICTED: uncharacterized protein LOC101204945 [Cucumis sativus] >KGN46419.1 hy...	[more]
XP_008459904.1	4.3e-134	91.10	PREDICTED: uncharacterized protein LOC103498884 [Cucumis melo]	[more]
XP_022953329.1	1.9e-86	69.23	protein LAX PANICLE 2-like [Cucurbita moschata]	[more]
XP_022992476.1	9.7e-86	67.15	protein LAX PANICLE 2-like [Cucurbita maxima]	[more]
XP_023549028.1	9.7e-86	68.86	protein LAX PANICLE 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G007830 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13250.1	7.2e-35	52.00	RING finger protein	[more]
AT1G28080.1	6.2e-18	62.50	RING finger protein	[more]
AT1G06770.1	3.3e-11	38.53	DREB2A-interacting protein 1	[more]
AT2G30580.1	2.6e-08	32.48	DREB2A-interacting protein 2	[more]
AT3G23060.1	2.6e-08	32.73	RING/U-box superfamily protein	[more]

BLAST of CsaV3_6G007830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|G3XKQ9\|LAX2_ORYSJ	1.8e-22	51.35	Protein LAX PANICLE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LAX2 PE=1 SV=1	[more]
sp\|Q9M9Y4\|DRIP1_ARATH	5.9e-10	38.53	E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana OX=3702 GN=DRIP1 PE=1 ...	[more]
sp\|Q94AY3\|DRIP2_ARATH	4.7e-07	32.48	E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 ...	[more]
sp\|Q9LS86\|DRIPH_ARATH	4.7e-07	32.73	Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana OX=3702 GN=At...	[more]

BLAST of CsaV3_6G007830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KC58\|A0A0A0KC58_CUCSA	1.3e-150	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091920 PE=4 SV=1	[more]
tr\|A0A1S3CBC6\|A0A1S3CBC6_CUCME	2.8e-134	91.10	uncharacterized protein LOC103498884 OS=Cucumis melo OX=3656 GN=LOC103498884 PE=...	[more]
tr\|A0A2C9VGC4\|A0A2C9VGC4_MANES	2.3e-43	37.13	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G102600 PE=4 SV=...	[more]
tr\|A0A2C9VBZ9\|A0A2C9VBZ9_MANES	3.3e-42	40.56	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G186300 PE=4 SV=...	[more]
tr\|A0A2K2BT93\|A0A2K2BT93_POPTR	2.8e-41	55.37	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G062700v3 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G007830.1	CsaV3_6G007830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..63
None	No IPR available	PANTHER	PTHR10825:SF50	RING FINGER PROTEIN	coord: 34..295
None	No IPR available	PANTHER	PTHR10825	RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT	coord: 34..295

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G007830	CSPI06G07430	Wild cucumber (PI 183967)	cpicucB364
CsaV3_6G007830	Cucsa.349270	Cucumber (Gy14) v1	cgycucB532
CsaV3_6G007830	CmaCh08G000180	Cucurbita maxima (Rimu)	cmacucB1072
CsaV3_6G007830	CmaCh17G014080	Cucurbita maxima (Rimu)	cmacucB0439
CsaV3_6G007830	CmoCh17G013550	Cucurbita moschata (Rifu)	cmocucB0433
CsaV3_6G007830	Cp4.1LG12g09910	Cucurbita pepo (Zucchini)	cpecucB0166
CsaV3_6G007830	Cp4.1LG08g06320	Cucurbita pepo (Zucchini)	cpecucB1075
CsaV3_6G007830	CsGy6G007430	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G007830	Carg11567	Silver-seed gourd	carcucB0012
CsaV3_6G007830	Carg15427	Silver-seed gourd	carcucB0734
CsaV3_6G007830	Cla001486	Watermelon (97103) v1	cucwmB562
CsaV3_6G007830	MELO3C022349	Melon (DHL92) v3.5.1	cucmeB444
CsaV3_6G007830	ClCG06G001790	Watermelon (Charleston Gray)	cucwcgB497
CsaV3_6G007830	Lsi09G017630	Bottle gourd (USVL1VR-Ls)	cuclsiB424
CsaV3_6G007830	MELO3C022349.2	Melon (DHL92) v3.6.1	cucmedB435
CsaV3_6G007830	Cla97C06G111090	Watermelon (97103) v2	cucwmbB487
CsaV3_6G007830	Bhi12G002134	Wax gourd	cucwgoB549

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G007830	Silver-seed gourd	carcucB1024
CsaV3_6G007830	Cucumber (Gy14) v1	cgycucB239
CsaV3_6G007830	Cucurbita maxima (Rimu)	cmacucB0267
CsaV3_6G007830	Cucurbita moschata (Rifu)	cmocucB0148
CsaV3_6G007830	Cucurbita moschata (Rifu)	cmocucB0256
CsaV3_6G007830	Cucurbita moschata (Rifu)	cmocucB1054
CsaV3_6G007830	Cucurbita pepo (Zucchini)	cpecucB0403
CsaV3_6G007830	Cucurbita pepo (Zucchini)	cpecucB0652
CsaV3_6G007830	Cucurbita pepo (Zucchini)	cpecucB0784
CsaV3_6G007830	Wild cucumber (PI 183967)	cpicucB053
CsaV3_6G007830	Melon (DHL92) v3.6.1	cucmedB451