ClCG05G014820 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G014820
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Oxygen evolving enhancer 3 family protein
Location	CG_Chr05 : 25733535 .. 25734410 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGTCTTGCAAATTTAAACGAGAAATTCTCCGCCATTCCCAACCTCCCGAAGCTTCAAAACACTCATAAGAGACTCAAAATTACTGGGTTTCTCAAGAAACAAACAGATGTCTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATCGCTTCTGCTAACGAGTACTGGCTCAACGGCCCTTTGCCTGTGCCTTCTGTTTACAACAGTAAGCTTTTTGATTGAACGAGTTTGCAACTTTCTATTTCTGTTTTTGTTTTCCTTATCCGGGTGCAAGTTGAAATTGGAAAATCTGAGTTGCTTTGGTTAGTTCTATGGTAAGTACTATGGAATTTGTGATGAATTCTTTGTAACAGACATCGCGAACGAGAACACGGGGACTCGGTCATTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAGAAGGAAGAAAATACAGATTGAAGAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTTAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTACGACTTCGACAACGTTATCTCGGCAGCAGCAGAGGGTGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAACTTCGAAAAGGTAAAAGGAAGAGAAGATGCAAAATTTCAGCAAATGTATGCAAAATTTCAAGCTGAAGTACCTTCTTTTGTGTTTTGCAGCTTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTATCAACAGACAACACCAATACTTCAAGAAGTCATGGATAGAATGGCATAA

mRNA sequence

ATGGCTCGTCTTGCAAATTTAAACGAGAAATTCTCCGCCATTCCCAACCTCCCGAAGCTTCAAAACACTCATAAGAGACTCAAAATTACTGGGTTTCTCAAGAAACAAACAGATGTCTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATCGCTTCTGCTAACGAGTACTGGCTCAACGGCCCTTTGCCTGTGCCTTCTGTTTACAACAACATCGCGAACGAGAACACGGGGACTCGGTCATTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAGAAGGAAGAAAATACAGATTGAAGAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTTAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTACGACTTCGACAACGTTATCTCGGCAGCAGCAGAGGGTGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAACTTCGAAAAGCTTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTATCAACAGACAACACCAATACTTCAAGAAGTCATGGATAGAATGGCATAA

Coding sequence (CDS)

ATGGCTCGTCTTGCAAATTTAAACGAGAAATTCTCCGCCATTCCCAACCTCCCGAAGCTTCAAAACACTCATAAGAGACTCAAAATTACTGGGTTTCTCAAGAAACAAACAGATGTCTCTTCTCATCAAATCTCATTGACAAGAAGATTGGCTTTAACCAGCCTTGTCTCTGTTGCTCTCTTTGGCAATGCATCCCCCGAGATCGCTTCTGCTAACGAGTACTGGCTCAACGGCCCTTTGCCTGTGCCTTCTGTTTACAACAACATCGCGAACGAGAACACGGGGACTCGGTCATTTCTGAAGACAGGGATATACATAGCTAACATAGGAACAGAAGGAAGAAAATACAGATTGAAGAAATATGCATTTGATCTTCTAGCTATGGCAGATTTGATTGGGAAAGATACTTTGAATTATGTTAGAAAGTATCTTCGACTCAAATCAACCTTCATGTACTACGACTTCGACAACGTTATCTCGGCAGCAGCAGAGGGTGAGAAGCAGCCTCTTGTTGATTTAGCGAACAGATTATTTGACAACTTCGAAAAGCTTGAAGATGCAGCAAAGCAAAAGAATCTGAGTGAAACTGAATCCTACTATCAACAGACAACACCAATACTTCAAGAAGTCATGGATAGAATGGCATAA

Protein sequence

MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA

Homology

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BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PNSL3_ARATH (Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis thaliana GN=PNSL3 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-67
Identity = 129/220 (58.64%), Postives = 162/220 (73.64%), Query Frame = 1


Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSH--QISLTRRLALTSLVSV 60
           MA   +LN   + +P+LPKL  + K  K +GF  ++T+       + +TRR+ L   VS+
Sbjct: 1   MAHFIDLNSLTNTLPSLPKLPESRKTGKSSGFACRRTEEFQEPDSVQITRRMTLGFAVSI 60

Query: 61  AL---FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRK 120
            L    G  +  +A  N +W++GPLP+P +YNNI NE TGTR+F+K G+Y+A+IGT+GR 
Sbjct: 61  GLTGILGENNVSLAQDNGFWIDGPLPIPPIYNNIVNEKTGTRTFIKKGVYVADIGTKGRM 120

Query: 121 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLAN 180
           YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +KQPL DLAN
Sbjct: 121 YRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLAN 180

Query: 181 RLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           RLFDNFEKLEDAAK KNL+ETES Y+ T  +LQEVM RMA
Sbjct: 181 RLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

[Close]

BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 84.0 bits (206), Expect = 2.3e-15
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1


Query: 39  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTG-T 98
           V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS       +N+   
Sbjct: 43  VRAQQSEETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQA 102

Query: 99  RSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYY 158
           R F   LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ Y
Sbjct: 103 RDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRY 162

Query: 159 DFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDR 215
           D + +IS+  + EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ +
Sbjct: 163 DLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAK 222

[Close]

BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 3.0e-12
Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = 1


Query: 33  LKKQTDVSSHQISLTRRLALTSLVSVALFGNASPE--IASANEYWLNGPLPVPSVYNNIA 92
           ++ Q +VS  + S   R ++  LV+  L G +  +   A A    + GP P+PS      
Sbjct: 47  IRAQQNVSVPESS---RRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGP-PLPSGGLPGT 106

Query: 93  NENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLK 152
           + +   R F   LK   YI  +       R K  A +++ +   I K    YV+  LRL+
Sbjct: 107 DNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLR 166

Query: 153 STFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPIL 212
           ++++ YD + VISA  + EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L
Sbjct: 167 ASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSL 226

Query: 213 QEVMDRM 215
             V+ ++
Sbjct: 227 NNVLAKL 229

[Close]

BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-11
Identity = 60/221 (27.15%), Postives = 101/221 (45.70%), Query Frame = 1


Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MA +  L++    +P  P+      RL +      + D ++  +   RR A+  LV+  +
Sbjct: 5   MASMTGLSQGVQ-LPAGPRRAGGRSRLAVV-----RADAAAADVQTGRR-AVLGLVATGI 64

Query: 61  FGNASPEIA---SANEYWLNGPLP----VPSVYNNIANENTGTRSFLKTGIYIANIGTEG 120
            G A  + A   +A    L  P P    +P   N+    +T     L+   Y+  +    
Sbjct: 65  AGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLP--LRERFYLQPLPPAE 124

Query: 121 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDL 180
              R K+ A D++ +  LI K    +VR  LRL+++++ YD   VI++  + EK+ L DL
Sbjct: 125 AAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDL 184

Query: 181 ANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM 215
             +LF   + L+ AAK K+  E E YY  T   L +V+ ++
Sbjct: 185 TGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKL 216

[Close]

BLAST of ClCG05G014820 vs. Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-11
Identity = 60/221 (27.15%), Postives = 101/221 (45.70%), Query Frame = 1


Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MA +  L++    +P  P+      RL +      + D ++  +   RR A+  LV+  +
Sbjct: 5   MASMTGLSQGVQ-LPAGPRRAGGRSRLAVV-----RADAAAADVQTGRR-AVLGLVATGI 64

Query: 61  FGNASPEIA---SANEYWLNGPLP----VPSVYNNIANENTGTRSFLKTGIYIANIGTEG 120
            G A  + A   +A    L  P P    +P   N+    +T     L+   Y+  +    
Sbjct: 65  AGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLP--LRERFYLQPLPPAE 124

Query: 121 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDL 180
              R K+ A D++ +  LI K    +VR  LRL+++++ YD   VI++  + EK+ L DL
Sbjct: 125 AAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDL 184

Query: 181 ANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRM 215
             +LF   + L+ AAK K+  E E YY  T   L +V+ ++
Sbjct: 185 TGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKL 216

[Close]

BLAST of ClCG05G014820 vs. TrEMBL
Match: A0A0A0L7N1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G414060 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 5.4e-109
Identity = 205/215 (95.35%), Postives = 208/215 (96.74%), Query Frame = 1


Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MARLANLN KFSAIPNLPKLQN HKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 61  FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRKYRLKK 120
           FGNASPEIASANEYWL+GPLPVPSV NNI NE TGTRSFLKTGIYIANIGT+GRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDN 180
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 215

[Close]

BLAST of ClCG05G014820 vs. TrEMBL
Match: V4TXQ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009429mg PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.6e-68
Identity = 144/221 (65.16%), Postives = 162/221 (73.30%), Query Frame = 1


Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVS 60
           MA LANLN   E   A+PNLPK Q   KR KI G L  + +    Q  +TRR++L  L S
Sbjct: 1   MAHLANLNGVSETLPAVPNLPKFQKFQKRAKIIGLLGHKAENFQDQAQITRRVSL-GLAS 60

Query: 61  VALFGNASPE---IASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGR 120
           +AL G+ S     +A  N  W+ GPLPVP VYNNIA+E TGTRSFLK  IYIANIGT+GR
Sbjct: 61  LALIGSTSSNGASLAEDNGLWVTGPLPVPPVYNNIASEKTGTRSFLKKAIYIANIGTKGR 120

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLA 180
            +RLK+YAFDLLAMADLIG DTLNYVRKYLRLKSTFMYYDFDNVISAAA  +KQPL DLA
Sbjct: 121 IHRLKRYAFDLLAMADLIGPDTLNYVRKYLRLKSTFMYYDFDNVISAAAPSDKQPLTDLA 180

Query: 181 NRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLFD+FEKLE A   KN  +T+S Y  T  IL EVMDRMA
Sbjct: 181 NRLFDSFEKLEVAVSTKNFPQTQSTYADTAVILHEVMDRMA 220

[Close]

BLAST of ClCG05G014820 vs. TrEMBL
Match: A0A067DU68_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026590mg PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.9e-68
Identity = 144/221 (65.16%), Postives = 162/221 (73.30%), Query Frame = 1


Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVS 60
           MA LANLN   E   A+PNLPK Q   KR KI G L  + +    Q  +TRR++L  L S
Sbjct: 17  MAHLANLNGVSETLPAVPNLPKFQKFPKRAKIIGLLGHKAENFQDQAQITRRVSL-GLAS 76

Query: 61  VALFGNASPE---IASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGR 120
           +AL G+ S     +A  N  W+ GPLPVP VYNNIANE TGTRSFLK  IYIANIGT+GR
Sbjct: 77  LALIGSTSTNGVSLAEDNGLWVTGPLPVPPVYNNIANEKTGTRSFLKKAIYIANIGTKGR 136

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLA 180
            +RLK+YAFDLLAMADLIG DTLNYVRKYLRLKSTFMYYDFDNVISAAA  +KQPL DLA
Sbjct: 137 IHRLKRYAFDLLAMADLIGPDTLNYVRKYLRLKSTFMYYDFDNVISAAAPTDKQPLTDLA 196

Query: 181 NRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLF++FEKLE A   KN  +T+S Y  T  IL EVMDRMA
Sbjct: 197 NRLFESFEKLEVAVSTKNFPQTQSTYADTAVILHEVMDRMA 236

[Close]

BLAST of ClCG05G014820 vs. TrEMBL
Match: W9QQM8_9ROSA (Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 5.1e-67
Identity = 140/224 (62.50%), Postives = 164/224 (73.21%), Query Frame = 1


Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTD---VSSHQISLTRRLALTS 60
           MARLANLN   E  +    LP L+ T KR  I GF  K+ D    S H +  TRR     
Sbjct: 1   MARLANLNGISETLAGALRLPSLRRTQKRANIVGFQGKKKDDHSQSEHNVQTTRRKLALG 60

Query: 61  LVSVALFGNAS---PEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGT 120
           L S+AL GN +     +A  N +W++GPLPVP+V NNIANE TGTRSFLK GIY+A+IGT
Sbjct: 61  LASIALVGNTTCNGVSLAEDNGFWIDGPLPVPTVDNNIANEKTGTRSFLKKGIYMADIGT 120

Query: 121 EGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLV 180
           + RKYRL+K AFDLLA+ DLIGKDTLNYV+KYLRLKSTFMYYDFD VI+AA   +KQPL 
Sbjct: 121 KNRKYRLRKCAFDLLALEDLIGKDTLNYVQKYLRLKSTFMYYDFDKVITAATVDDKQPLT 180

Query: 181 DLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
            LANRLFD+FEKLE A KQ+NL ETE++Y+ T  ILQEVMDRMA
Sbjct: 181 HLANRLFDSFEKLEGATKQRNLPETETFYKDTKVILQEVMDRMA 224

[Close]

BLAST of ClCG05G014820 vs. TrEMBL
Match: A0A061FDQ5_THECC (PsbQ-like 1 OS=Theobroma cacao GN=TCM_031120 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.5e-66
Identity = 142/221 (64.25%), Postives = 164/221 (74.21%), Query Frame = 1


Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQT-DVSSHQISLTRRLALTSLV 60
           M  LANLN   E   AIP LP +Q + K  KI GFL K T D+    + +TRR+AL SL 
Sbjct: 1   MVHLANLNGITETLPAIPKLPSIQRSRKTAKIIGFLGKNTEDLREQPLQMTRRMAL-SLA 60

Query: 61  SVALFGNASPEIASA--NEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGR 120
           S+AL G +S  I+ A  N YW+   LPVPSV NNIANE TGTRSF+K G+Y+AN+ T+ R
Sbjct: 61  SIALVGTSSNSISLAEDNGYWITDLLPVPSVENNIANEKTGTRSFVKKGLYVANLNTKNR 120

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLA 180
            YRLKKYAFDLLAMADLIG  TL+YV+KYLRLKST MYYDFD +ISAA   +KQPL  LA
Sbjct: 121 MYRLKKYAFDLLAMADLIGPGTLSYVKKYLRLKSTVMYYDFDKIISAAPVDDKQPLTTLA 180

Query: 181 NRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLFD+FEKLEDAAK +NL +TES YQ T  ILQEVMDRMA
Sbjct: 181 NRLFDSFEKLEDAAKTRNLPQTESCYQNTKVILQEVMDRMA 220

[Close]

BLAST of ClCG05G014820 vs. TAIR10
Match: AT3G01440.1 (AT3G01440.1 PsbQ-like 1)

HSP 1 Score: 256.1 bits (653), Expect = 1.9e-68
Identity = 129/220 (58.64%), Postives = 162/220 (73.64%), Query Frame = 1


Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSH--QISLTRRLALTSLVSV 60
           MA   +LN   + +P+LPKL  + K  K +GF  ++T+       + +TRR+ L   VS+
Sbjct: 1   MAHFIDLNSLTNTLPSLPKLPESRKTGKSSGFACRRTEEFQEPDSVQITRRMTLGFAVSI 60

Query: 61  AL---FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRK 120
            L    G  +  +A  N +W++GPLP+P +YNNI NE TGTR+F+K G+Y+A+IGT+GR 
Sbjct: 61  GLTGILGENNVSLAQDNGFWIDGPLPIPPIYNNIVNEKTGTRTFIKKGVYVADIGTKGRM 120

Query: 121 YRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLAN 180
           YR+KK AFDLLAM DLIG DTLNYV+KYLRLKSTF++YDFDN+ISAAA  +KQPL DLAN
Sbjct: 121 YRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTDLAN 180

Query: 181 RLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           RLFDNFEKLEDAAK KNL+ETES Y+ T  +LQEVM RMA
Sbjct: 181 RLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

[Close]

BLAST of ClCG05G014820 vs. TAIR10
Match: AT4G21280.2 (AT4G21280.2 photosystem II subunit QA)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16
Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1


Query: 39  VSSHQISLTRRLALTSLVSVALFGNASPEIASANEYWLN-GPLPVPSVYNNIANENTG-T 98
           V + Q   T R ++  LV+  L G +  +   A+   +  GP P PS       +N+   
Sbjct: 43  VRAQQSEETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQA 102

Query: 99  RSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYY 158
           R F   LK   Y+  +       R K+ A D++ +  LI +    YV+  LR K++++ Y
Sbjct: 103 RDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRY 162

Query: 159 DFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDR 215
           D + +IS+  + EK+ L DL  +LFD  + L+ AAK+K+ S+ E YY +T   L EV+ +
Sbjct: 163 DLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAK 222

[Close]

BLAST of ClCG05G014820 vs. TAIR10
Match: AT4G05180.1 (AT4G05180.1 photosystem II subunit Q-2)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-13
Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = 1


Query: 33  LKKQTDVSSHQISLTRRLALTSLVSVALFGNASPE--IASANEYWLNGPLPVPSVYNNIA 92
           ++ Q +VS  + S   R ++  LV+  L G +  +   A A    + GP P+PS      
Sbjct: 47  IRAQQNVSVPESS---RRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGP-PLPSGGLPGT 106

Query: 93  NENTGTRSF---LKTGIYIANIGTEGRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLK 152
           + +   R F   LK   YI  +       R K  A +++ +   I K    YV+  LRL+
Sbjct: 107 DNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLR 166

Query: 153 STFMYYDFDNVISAAAEGEKQPLVDLANRLFDNFEKLEDAAKQKNLSETESYYQQTTPIL 212
           ++++ YD + VISA  + EKQ L DL  +LF   + L+ AA+ K+  + E YY +T   L
Sbjct: 167 ASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSL 226

Query: 213 QEVMDRM 215
             V+ ++
Sbjct: 227 NNVLAKL 229

[Close]

BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|449468510|ref|XP_004151964.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 401.7 bits (1031), Expect = 7.8e-109
Identity = 205/215 (95.35%), Postives = 208/215 (96.74%), Query Frame = 1


Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MARLANLN KFSAIPNLPKLQN HKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 61  FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRKYRLKK 120
           FGNASPEIASANEYWL+GPLPVPSV NNI NE TGTRSFLKTGIYIANIGT+GRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIVNEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDN 180
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 215

[Close]

BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|659109145|ref|XP_008454569.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 2.3e-108
Identity = 204/215 (94.88%), Postives = 209/215 (97.21%), Query Frame = 1


Query: 1   MARLANLNEKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60
           MARLANLN KFSAIPNLPKLQN HK+LKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL
Sbjct: 1   MARLANLNGKFSAIPNLPKLQNIHKKLKITGFLKKQTDVSSHQISLTRRLALTSLVSVAL 60

Query: 61  FGNASPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGRKYRLKK 120
           FGNASPEIASANEYWL+GPLPVPSV NNIANE TGTRSFLKTGIYIANIGT+GRKYRLKK
Sbjct: 61  FGNASPEIASANEYWLDGPLPVPSVDNNIANEQTGTRSFLKTGIYIANIGTKGRKYRLKK 120

Query: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLANRLFDN 180
           YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFD VISAAA+ EKQPLVDLANRLFDN
Sbjct: 121 YAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDKVISAAADDEKQPLVDLANRLFDN 180

Query: 181 FEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           FEKLE+AAKQKNLSETESYYQQTTPILQEVMDRMA
Sbjct: 181 FEKLENAAKQKNLSETESYYQQTTPILQEVMDRMA 215

[Close]

BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|645278675|ref|XP_008244339.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Prunus mume])

HSP 1 Score: 277.7 bits (709), Expect = 1.7e-71
Identity = 148/221 (66.97%), Postives = 171/221 (77.38%), Query Frame = 1


Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFL-KKQTDVSSHQISLTRRLALTSLV 60
           MA LANLN   E   AIP LP +Q T KR+ I GF+ KK+ D+    +  TRRLAL  L 
Sbjct: 1   MAHLANLNGVSETLPAIPRLPGIQWTQKRVSIVGFMGKKKDDLQEQPLHTTRRLAL-GLA 60

Query: 61  SVALFGNA--SPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEGR 120
           S+AL GN+     +A  N +W++GPLPVPS  N IANE TGTRSFLK G+Y+ANIGT+GR
Sbjct: 61  SIALVGNSCNGVSLAEGNGFWIDGPLPVPSAENKIANEKTGTRSFLKKGLYMANIGTKGR 120

Query: 121 KYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDLA 180
           K+RLKKYAFDLLAMADLI +DTLNYVR++LRLKSTFMY+DFD VISAA   EKQPL DLA
Sbjct: 121 KFRLKKYAFDLLAMADLIAQDTLNYVRRFLRLKSTFMYFDFDQVISAAPVDEKQPLTDLA 180

Query: 181 NRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           NRLFD  EKL+ A KQ+NLSETESYY+ TT ILQEVMDRMA
Sbjct: 181 NRLFDTVEKLDGAVKQRNLSETESYYKDTTVILQEVMDRMA 220

[Close]

BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|1009110877|ref|XP_015898087.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 277.7 bits (709), Expect = 1.7e-71
Identity = 149/222 (67.12%), Postives = 173/222 (77.93%), Query Frame = 1


Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFLKKQTDVSSHQISL--TRRLALTSL 60
           MARLAN N   E    I  LP ++ T KR+K  GFL K+TD  S Q SL  TRRLAL  L
Sbjct: 1   MARLANFNRVSETLPGIAKLPSIRRTQKRVKKIGFLCKKTDDDSQQHSLQTTRRLAL-GL 60

Query: 61  VSVALFGNA--SPEIASANEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTEG 120
            S+ L GN+     +A  N +WL+GPLPVPSVYNNIANE TGTRSFLK G+YIA+I T+G
Sbjct: 61  ASITLVGNSCNGVSLAEENRFWLDGPLPVPSVYNNIANEKTGTRSFLKKGVYIADIPTKG 120

Query: 121 RKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVDL 180
           R YRL+KYAFDLLAM DLIG+DTLNYV+KYLRLKSTFMYYDFD VISAA   +KQPL +L
Sbjct: 121 RMYRLRKYAFDLLAMEDLIGQDTLNYVQKYLRLKSTFMYYDFDKVISAAPVDDKQPLTNL 180

Query: 181 ANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           ANRLFDN EKL+DAAKQ+NL++TE++Y+ T  ILQEVMDRMA
Sbjct: 181 ANRLFDNVEKLDDAAKQRNLTQTETFYKDTKVILQEVMDRMA 221

[Close]

BLAST of ClCG05G014820 vs. NCBI nr
Match: gi|470116327|ref|XP_004294334.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 268.9 bits (686), Expect = 7.9e-69
Identity = 147/223 (65.92%), Postives = 169/223 (75.78%), Query Frame = 1


Query: 1   MARLANLN---EKFSAIPNLPKLQNTHKRLKITGFL--KKQTDVSSHQISLTRRLALTSL 60
           MA+LANLN   E    +  LP +Q T KR+ I G L  KK  DV    +  TRRLAL  L
Sbjct: 1   MAQLANLNGISETLPVLHRLPSIQKTRKRVSIIGCLGKKKDHDVLEQPLQTTRRLAL-GL 60

Query: 61  VSVALFGNASPEIASA---NEYWLNGPLPVPSVYNNIANENTGTRSFLKTGIYIANIGTE 120
            S+AL GN+S E A A   N +WL+GPLPVPS  N IANE TGTRSFLK  +Y+A+IGT+
Sbjct: 61  ASIALVGNSSSEAALAEGNNGFWLDGPLPVPSADNKIANEETGTRSFLKNHLYMADIGTK 120

Query: 121 GRKYRLKKYAFDLLAMADLIGKDTLNYVRKYLRLKSTFMYYDFDNVISAAAEGEKQPLVD 180
           GRKYRLKKYAFDLLAMADLI +DTLNYV+KYLRLKSTFMY+DFD VI+AA   EKQPL D
Sbjct: 121 GRKYRLKKYAFDLLAMADLIAQDTLNYVQKYLRLKSTFMYFDFDKVITAAPVTEKQPLTD 180

Query: 181 LANRLFDNFEKLEDAAKQKNLSETESYYQQTTPILQEVMDRMA 216
           LANRLF+  EKL+ A +Q+NLSETE+YYQ TT ILQEVMDRMA
Sbjct: 181 LANRLFNTVEKLDGAVRQRNLSETETYYQDTTVILQEVMDRMA 222

The following BLAST results are available for this feature:

BLAST of ClCG05G014820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PNSL3_ARATH	3.3e-67	58.64	Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis t...	[more]
PSBQ1_ARATH	2.3e-15	30.94	Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=P...	[more]
PSBQ2_ARATH	3.0e-12	29.95	Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=P...	[more]
PSBQ_ORYSI	3.4e-11	27.15	Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica ...	[more]
PSBQ_ORYSJ	3.4e-11	27.15	Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonic...	[more]

BLAST of ClCG05G014820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7N1_CUCSA	5.4e-109	95.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G414060 PE=4 SV=1	[more]
V4TXQ4_9ROSI	3.6e-68	65.16	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009429mg PE=4 SV=1	[more]
A0A067DU68_CITSI	7.9e-68	65.16	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026590mg PE=4 SV=1	[more]
W9QQM8_9ROSA	5.1e-67	62.50	Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1	[more]
A0A061FDQ5_THECC	1.5e-66	64.25	PsbQ-like 1 OS=Theobroma cacao GN=TCM_031120 PE=4 SV=1	[more]

BLAST of ClCG05G014820 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G01440.1	1.9e-68	58.64	PsbQ-like 1	[more]
AT4G21280.2	1.3e-16	30.94	photosystem II subunit QA	[more]
AT4G05180.1	1.7e-13	29.95	photosystem II subunit Q-2	[more]

BLAST of ClCG05G014820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468510\|ref\|XP_004151964.1\|	7.8e-109	95.35	PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Cucu...	[more]
gi\|659109145\|ref\|XP_008454569.1\|	2.3e-108	94.88	PREDICTED: psbQ-like protein 2, chloroplastic [Cucumis melo]	[more]
gi\|645278675\|ref\|XP_008244339.1\|	1.7e-71	66.97	PREDICTED: psbQ-like protein 2, chloroplastic [Prunus mume]	[more]
gi\|1009110877\|ref\|XP_015898087.1\|	1.7e-71	67.12	PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like ...	[more]
gi\|470116327\|ref\|XP_004294334.1\|	7.9e-69	65.92	PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic [Frag...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008797	PSII_PsbQ
IPR023222	PsbQ-like_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0009523	photosystem II
GO:0009654	photosystem II oxygen evolving complex
GO:0019898	extrinsic component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015979	photosynthesis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0030095	chloroplast photosystem II
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009344	nitrite reductase complex [NAD(P)H]
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G014820.1	ClCG05G014820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008797	Oxygen-evolving enhancer protein 3	PFAM	PF05757	PsbQ	coord: 23..215 score: 9.6
IPR023222	PsbQ-like domain	GENE3D	G3DSA:1.20.120.290		coord: 78..215 score: 8.3
IPR023222	PsbQ-like domain	unknown	SSF101112	Oxygen-evolving enhancer protein 3,	coord: 105..215 score: 1.01
None	No IPR available	PANTHER	PTHR33399	FAMILY NOT NAMED	coord: 1..215 score: 1.6E
None	No IPR available	PANTHER	PTHR33399:SF2	PSBQ-LIKE PROTEIN 2, CHLOROPLASTIC	coord: 1..215 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G014820	MELO3C018131	Melon (DHL92) v3.5.1	mewcgB338
ClCG05G014820	Cla001715	Watermelon (97103) v1	wcgwmB285
ClCG05G014820	Cla97C05G096030	Watermelon (97103) v2	wcgwmbB229
ClCG05G014820	Bhi09G001641	Wax gourd	wcgwgoB473
ClCG05G014820	CmaCh01G011530	Cucurbita maxima (Rimu)	cmawcgB408
ClCG05G014820	CmoCh01G012060	Cucurbita moschata (Rifu)	cmowcgB407
ClCG05G014820	Lsi04G012470	Bottle gourd (USVL1VR-Ls)	lsiwcgB285
ClCG05G014820	Cp4.1LG02g01180	Cucurbita pepo (Zucchini)	cpewcgB519
ClCG05G014820	CsGy3G022110	Cucumber (Gy14) v2	cgybwcgB218
ClCG05G014820	MELO3C018131.2	Melon (DHL92) v3.6.1	medwcgB332
ClCG05G014820	Carg05650	Silver-seed gourd	carwcgB0998

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G014820	Cucurbita maxima (Rimu)	cmawcgB025
ClCG05G014820	Cucurbita maxima (Rimu)	cmawcgB298
ClCG05G014820	Cucurbita moschata (Rifu)	cmowcgB019
ClCG05G014820	Wild cucumber (PI 183967)	cpiwcgB242
ClCG05G014820	Cucumber (Chinese Long) v2	cuwcgB234
ClCG05G014820	Cucurbita pepo (Zucchini)	cpewcgB704
ClCG05G014820	Melon (DHL92) v3.6.1	medwcgB149
ClCG05G014820	Silver-seed gourd	carwcgB0035
ClCG05G014820	Silver-seed gourd	carwcgB0885
ClCG05G014820	Cucumber (Chinese Long) v3	cucwcgB242
ClCG05G014820	Watermelon (97103) v2	wcgwmbB219
ClCG05G014820	Watermelon (97103) v2	wcgwmbB226
ClCG05G014820	Watermelon (Charleston Gray)	wcgwcgB142
ClCG05G014820	Cucumber (Gy14) v1	cgywcgB466