ClCG05G013080 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G013080
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	18.2 kDa class I heat shock protein
Location	CG_Chr05 : 18261152 .. 18262855 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATAATTCAAAACTCAAAACAAATACACCAAAAATCTGATCAACATTTCTCAAATCAGTTTTCTCCATCTTCATTGGAAAAATGTCTTTGATTCTTAACGACCTCTTCGATCCGTTTCTTTATATGATCAACCAATGTCCTGTTTTGAATACTCCCATTGACTGGAAAGAGACTCCGGCCGCTCACGTCTTCATTGCCGATCTGCCCGGGTTGAAGAAGGAGCAGGTAAGACGATATAGGCAACTCAGACCATCAGCACCTCAAATTATACCAAATATCTCTAAATTTTAATCTTTTGAGTAGGTTTAAACTTTTAACGTTATGGTATTCATGTTGTAATTATGTTTTAAGTTGAAAAATTTTAAACTTTAGATCTATTTAGTAACTAATTCGTTTCTTGTTTTTGAGTTTTTAAGAATTATGTTTACAATTTCTTAGAACAATTTGTATATTTATTAAATAAAATAGTTGAATTTTTAGTCAAATTCTAAAAATAAAAATAAATTTTTAAAAATTATTTTTTTGGTTTCCAAAACTTGGCTCGCTTTTAGACTTGAAAAGTAAAAAAAAAAAGAAAAAGAAAATTAGATAACAAAGCATGAAATTGGAGGGAAAATGGGTGTTTATAGACTACATTTTCAAAAACTAAAAACCAGATGATTACCAATTAAACTTTTGTTTAATGTTTTGGAAAATTAAGCCGATAAACACATTTCTACCTTTATATTTACTATTTTGTTATCTACCTTTTATCAATGTTTTATAAAAATTAAATCAAAGTTTTGAAAATAAAAAAGTAGGTTTTTTTAAAATTAAGAATATGGCTAAGAAGTCAACTTTTTTACTTAAAAAATACAAATAATTGAAAGAAATTGATAAAAAATATATTTAATTTTCAAAAACTAAAAATAAAAAATTATATAATTACCAAATAAGGTTATAGTTTTCAAAATCTTGTTTTTGTTTGGATAGATTAACTAAGAATTAAGAGGAAATAAACATCAGTTTCAAAAACATAAAACTAAAATAAAAATTATTATTCAAGGAAATCTAAACTTTTATGATTTGTTATAATTAAGTCTCTAAACTTTTCAAAATAGAACTATATTATTTCATTTTAGTTTATGAAATTTTAAATTTTTTAAAATCTGCAACAATTTTGATGCTTATTTTATTTTATGTTTTAAATAAATTAACGATGTAGCTCGACTGTGTTAACTAACATAGTGCTAATGGCCTTGTTTCAATCCTGCTCGAGTAGGTGAAGGTGGAGGTGATGGAGGACGGCGATGGACGACTGCTGCAGATAAGTGGAGACAGGGGAGACGCTACTACCGCCAACGACGAGAATGACAAGAGTAGCGGTCATAAATGGCGGCGCGTGGAGCGTTGTCGGGGGAAATTCTGCAGGAGGTTTCGGCTGCCGGAGAATGTGAAGGCGGGCGAGGTGAGGGCGGCGATAGAGAACGGAGTTCTGACAGTGACGGTGCCAAAAGAGGAAATGATGAAGCCAGGGAAGAAGGTGATTGAGATTGAAACAGTTTAGGAACTTTGATGGAGTTTTGATATGTTGGTCAAAGTTTGACCTTTTTCTGTTTTTGCTGAATGTATGATATGCATGATGCTGTGGCGTAATGTCTGATCAATATGTTTGTAATTCCTTTTTCTTTTATTGAAAAAATAAAATGTGTGTAAAATTG

mRNA sequence

AGAAAATAATTCAAAACTCAAAACAAATACACCAAAAATCTGATCAACATTTCTCAAATCAGTTTTCTCCATCTTCATTGGAAAAATGTCTTTGATTCTTAACGACCTCTTCGATCCGTTTCTTTATATGATCAACCAATGTCCTGTTTTGAATACTCCCATTGACTGGAAAGAGACTCCGGCCGCTCACGTCTTCATTGCCGATCTGCCCGGGTTGAAGAAGGAGCAGGTGAAGGTGGAGGTGATGGAGGACGGCGATGGACGACTGCTGCAGATAAGTGGAGACAGGGGAGACGCTACTACCGCCAACGACGAGAATGACAAGAGTAGCGGTCATAAATGGCGGCGCGTGGAGCGTTGTCGGGGGAAATTCTGCAGGAGGTTTCGGCTGCCGGAGAATGTGAAGGCGGGCGAGGTGAGGGCGGCGATAGAGAACGGAGTTCTGACAGTGACGGTGCCAAAAGAGGAAATGATGAAGCCAGGGAAGAAGGTGATTGAGATTGAAACAGTTTAGGAACTTTGATGGAGTTTTGATATGTTGGTCAAAGTTTGACCTTTTTCTGTTTTTGCTGAATGTATGATATGCATGATGCTGTGGCGTAATGTCTGATCAATATGTTTGTAATTCCTTTTTCTTTTATTGAAAAAATAAAATGTGTGTAAAATTG

Coding sequence (CDS)

ATGTCTTTGATTCTTAACGACCTCTTCGATCCGTTTCTTTATATGATCAACCAATGTCCTGTTTTGAATACTCCCATTGACTGGAAAGAGACTCCGGCCGCTCACGTCTTCATTGCCGATCTGCCCGGGTTGAAGAAGGAGCAGGTGAAGGTGGAGGTGATGGAGGACGGCGATGGACGACTGCTGCAGATAAGTGGAGACAGGGGAGACGCTACTACCGCCAACGACGAGAATGACAAGAGTAGCGGTCATAAATGGCGGCGCGTGGAGCGTTGTCGGGGGAAATTCTGCAGGAGGTTTCGGCTGCCGGAGAATGTGAAGGCGGGCGAGGTGAGGGCGGCGATAGAGAACGGAGTTCTGACAGTGACGGTGCCAAAAGAGGAAATGATGAAGCCAGGGAAGAAGGTGATTGAGATTGAAACAGTTTAG

Protein sequence

MSLILNDLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGRLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGVLTVTVPKEEMMKPGKKVIEIETV

Homology

[Close]

BLAST of ClCG05G013080 vs. Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.5e-33
Identity = 83/140 (59.29%), Postives = 92/140 (65.71%), Query Frame = 1


Query: 7   DLFDPFLYMI-------NQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDG 66
           D+FDPF  +              NT IDWKETP AHVF ADLPGLK E+VKVEV ED   
Sbjct: 23  DVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEED--- 82

Query: 67  RLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGV 126
           R+LQISG+R       D+NDK     W+RVER  GKF RRFRLPEN K  +V+A++ENGV
Sbjct: 83  RVLQISGERN--MEKEDKNDK-----WQRVERSSGKFMRRFRLPENAKMDQVKASMENGV 142

Query: 127 LTVTVPKEEMMKPGKKVIEI 140
           LTVTVPKEEM KP  K IEI
Sbjct: 143 LTVTVPKEEMKKPDVKSIEI 152

[Close]

BLAST of ClCG05G013080 vs. Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-32
Identity = 75/120 (62.50%), Postives = 87/120 (72.50%), Query Frame = 1


Query: 22  LNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGRLLQISGDRGDATTANDENDKS 81
           ++T IDWKETP AHVF ADLPGLKKE+VKVE+ +D   R+LQISG+R       D+ND+ 
Sbjct: 34  VSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDD---RVLQISGERN--VEKEDKNDQ- 93

Query: 82  SGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGVLTVTVPKEEMMKPGKKVIEIET 141
               W RVER  GKF RRFRLPEN K  +V+AA+ENGVLTVTVPKEE+ KP  K IEI +
Sbjct: 94  ----WHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPEVKSIEISS 143

[Close]

BLAST of ClCG05G013080 vs. Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-32
Identity = 81/140 (57.86%), Postives = 90/140 (64.29%), Query Frame = 1


Query: 7   DLFDPFLYMI-------NQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDG 66
           D+FDPF  +              NT IDWKETP AHVF ADLPGLKKE+VKVEV ED   
Sbjct: 23  DVFDPFKELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEED--- 82

Query: 67  RLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGV 126
           R+LQISG+R       D+ND      W RVER  GKF RRFRLPEN K  +V+A++ENGV
Sbjct: 83  RVLQISGERN--VEKEDKNDT-----WHRVERSSGKFMRRFRLPENAKMDQVKASMENGV 142

Query: 127 LTVTVPKEEMMKPGKKVIEI 140
           LTVTVPKEE+  P  K IEI
Sbjct: 143 LTVTVPKEEVNNPDVKSIEI 152

[Close]

BLAST of ClCG05G013080 vs. Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-32
Identity = 80/140 (57.14%), Postives = 90/140 (64.29%), Query Frame = 1


Query: 7   DLFDPFLYMI-------NQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDG 66
           D+FDPF  +              NT IDWKETP  HVF  DLPGLKKE+VKVEV ED   
Sbjct: 23  DVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEED--- 82

Query: 67  RLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGV 126
           R+LQISG+R       D+NDK     W R+ER  GKF RRFRLPEN K  +V+A++ENGV
Sbjct: 83  RVLQISGERN--VEKEDKNDK-----WHRMERSSGKFMRRFRLPENAKMDQVKASMENGV 142

Query: 127 LTVTVPKEEMMKPGKKVIEI 140
           LTVTVPKEE+ KP  K IEI
Sbjct: 143 LTVTVPKEEVKKPEVKSIEI 152

[Close]

BLAST of ClCG05G013080 vs. Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.7e-32
Identity = 76/141 (53.90%), Postives = 91/141 (64.54%), Query Frame = 1


Query: 7   DLFDPFL--------YMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGD 66
           D++DPF                 ++T +DWKETP AHVF AD+PGLKKE+VKV++ +D  
Sbjct: 22  DMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDD-- 81

Query: 67  GRLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENG 126
            R+LQISG+R       D+ND      W RVER  GKF RRFRLPEN K  EV+A++ENG
Sbjct: 82  -RVLQISGERN--VEKEDKNDT-----WHRVERSSGKFTRRFRLPENAKVNEVKASMENG 141

Query: 127 VLTVTVPKEEMMKPGKKVIEI 140
           VLTVTVPKEE+ KP  K IEI
Sbjct: 142 VLTVTVPKEEVKKPDVKAIEI 152

[Close]

BLAST of ClCG05G013080 vs. TrEMBL
Match: A0A0A0L8Q9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G595190 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 6.6e-63
Identity = 123/144 (85.42%), Postives = 133/144 (92.36%), Query Frame = 1


Query: 1   MSLILNDLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGR 60
           MSLIL+++FDPFL MINQCPVLNTP DWKETPAAH+FIADLPGLKK+QVKVEVMEDGDGR
Sbjct: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRG-DATTAND-ENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENG 120
           LLQISGDRG DAT  ND +ND+SSGHKWRRVERCRGKFCRRFRLP NVKA EVRAA+ENG
Sbjct: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120

Query: 121 VLTVTVPKEEMMKPGKKVIEIETV 143
           VL VTVPKEE+ KP KKVIEIET+
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIETL 144

[Close]

BLAST of ClCG05G013080 vs. TrEMBL
Match: W9S8M5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017688 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.4e-43
Identity = 91/146 (62.33%), Postives = 114/146 (78.08%), Query Frame = 1


Query: 1   MSLILN----DLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMED 60
           MS+I N    ++ DPFL MIN+CPVLNTP DWKETP AHVF+ADLPGLKKE+VKVEV  D
Sbjct: 1   MSIISNLFGGEILDPFLSMINKCPVLNTPTDWKETPEAHVFVADLPGLKKEEVKVEVDHD 60

Query: 61  GDG--RLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAA 120
            DG  ++LQISG+R +     D+ +K++  KW RVERCRGKF RRFRLPEN K  E++A+
Sbjct: 61  RDGNHKVLQISGERKNEEVDKDDKNKNN-EKWHRVERCRGKFFRRFRLPENAKVDEIKAS 120

Query: 121 IENGVLTVTVPKEEMMKPGKKVIEIE 141
           +ENGVLTVT+PK+E+ K  +KV+ IE
Sbjct: 121 VENGVLTVTIPKKEVKKLERKVVPIE 145

[Close]

BLAST of ClCG05G013080 vs. TrEMBL
Match: B9GIX7_POPTR (17.5 kd heat shock family protein OS=Populus trichocarpa GN=POPTR_0001s35990g PE=3 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 4.9e-42
Identity = 86/140 (61.43%), Postives = 111/140 (79.29%), Query Frame = 1


Query: 3   LILNDLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGRLL 62
           L ++++FDPFL MIN+CPVLNTP DWKETP AH+F++DLPGLKKE+V VEV++  +G++L
Sbjct: 7   LCVDEIFDPFLSMINKCPVLNTPTDWKETPDAHIFVSDLPGLKKEEVTVEVVD--EGKVL 66

Query: 63  QISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGVLTV 122
           QISGDR +   + D    +   KW  VERCRGKF RRFRLP N K+ EV+A+++NGVL V
Sbjct: 67  QISGDRKNEEISED----NKTDKWHHVERCRGKFLRRFRLPGNAKSDEVKASMDNGVLVV 126

Query: 123 TVPKEEMMKPGKKVIEIETV 143
           TVPK+E+ KP KKVIEIE +
Sbjct: 127 TVPKQEVKKPEKKVIEIEEI 140

[Close]

BLAST of ClCG05G013080 vs. TrEMBL
Match: B9SLT1_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0531010 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.9e-41
Identity = 81/135 (60.00%), Postives = 106/135 (78.52%), Query Frame = 1


Query: 6   NDLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGRLLQIS 65
           +++  PFL M+N+CPVLNTP DWKETP +HVF++DLPGLK E+VKVE++++G G++LQIS
Sbjct: 4   DEIIYPFLSMLNKCPVLNTPTDWKETPESHVFVSDLPGLKNEEVKVEIVDEGKGKVLQIS 63

Query: 66  GDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGVLTVTVP 125
           G+R      + E D     KW R ERCRGKF RRFRLPEN K+  V+A++ENGVL VTVP
Sbjct: 64  GER------DAEKDNEISEKWHRAERCRGKFLRRFRLPENAKSDGVKASMENGVLVVTVP 123

Query: 126 KEEMMKPGKKVIEIE 141
           K+E+ KP K+VIE+E
Sbjct: 124 KQEIKKPEKRVIEVE 132

[Close]

BLAST of ClCG05G013080 vs. TrEMBL
Match: A0A061ECH5_THECC (HSP20-like chaperones superfamily protein OS=Theobroma cacao GN=TCM_017043 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.2e-41
Identity = 87/137 (63.50%), Postives = 108/137 (78.83%), Query Frame = 1


Query: 6   NDLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGRLLQIS 65
           ++++DPFL MIN+CPVLNTP DWKETP AHVF++DLPGLKKE+VKVEV    DGR+L+IS
Sbjct: 45  DEIYDPFLTMINKCPVLNTPTDWKETPEAHVFVSDLPGLKKEEVKVEV---DDGRVLKIS 104

Query: 66  GDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGVLTVTVP 125
           G+R   T   DE +     KW RVERC+GKF R FRLPEN K  EV+A++ENGVL VTVP
Sbjct: 105 GER---TVERDEKN----DKWHRVERCQGKFHRSFRLPENAKTDEVKASMENGVLVVTVP 164

Query: 126 KEEMMKPGKKVIEIETV 143
           K+++ KP KKV+EIE +
Sbjct: 165 KQKLKKPEKKVVEIEEI 171

[Close]

BLAST of ClCG05G013080 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 2.7e-31
Identity = 74/144 (51.39%), Postives = 91/144 (63.19%), Query Frame = 1


Query: 7   DLFDPFLYMINQCPVLNTP-----------IDWKETPAAHVFIADLPGLKKEQVKVEVME 66
           D+FDPF   +    + N P           +DW+ETP AHVF ADLPGL+KE+VKVEV  
Sbjct: 22  DVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVE- 81

Query: 67  DGDGRLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAI 126
             DG +LQISG+R     +N+  +K+   KW RVER  GKF RRFRLPEN K  E++A++
Sbjct: 82  --DGNILQISGER-----SNENEEKND--KWHRVERSSGKFTRRFRLPENAKMEEIKASM 141

Query: 127 ENGVLTVTVPKEEMMKPGKKVIEI 140
           ENGVL+VTVPK    KP  K I+I
Sbjct: 142 ENGVLSVTVPKVPEKKPEVKSIDI 155

[Close]

BLAST of ClCG05G013080 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 73/139 (52.52%), Postives = 90/139 (64.75%), Query Frame = 1


Query: 7   DLFDPFLYMINQC------PVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGR 66
           D++DPF  + +         ++N  +DW+ETP AHVF ADLPGLKKE+VKVE+ ED    
Sbjct: 23  DVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDS--- 82

Query: 67  LLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGVL 126
           +L+ISG+R       D+ND      W RVER  G+F RRFRLPENVK  +V+AA+ENGVL
Sbjct: 83  VLKISGERH--VEKEDKNDT-----WHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVL 142

Query: 127 TVTVPKEEMMKPGKKVIEI 140
           TVTVPK E  K   K I+I
Sbjct: 143 TVTVPKAETKKADVKSIQI 151

[Close]

BLAST of ClCG05G013080 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 127.9 bits (320), Expect = 5.1e-30
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 1


Query: 23  NTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGRLLQISGDRGDATTANDENDKSS 82
           N  +DW+ETP AHVF AD+PGLKKE+VKVEV    DG +LQISG+R      + EN++ S
Sbjct: 48  NAKVDWRETPEAHVFKADVPGLKKEEVKVEVE---DGNILQISGER------SSENEEKS 107

Query: 83  GHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGVLTVTVPKEEMMKPGKKVIEI 140
              W RVER  GKF RRFRLPEN K  EV+A++ENGVL+VTVPK +  KP  K ++I
Sbjct: 108 D-TWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDI 154

[Close]

BLAST of ClCG05G013080 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 126.3 bits (316), Expect = 1.5e-29
Identity = 76/146 (52.05%), Postives = 86/146 (58.90%), Query Frame = 1


Query: 7   DLFDPFLYMINQCPVL-------------NTPIDWKETPAAHVFIADLPGLKKEQVKVEV 66
           DL+DPF         L             N  +DWKETP AHVF ADLPGLKKE+VKVEV
Sbjct: 22  DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEV 81

Query: 67  MEDGDGRLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRA 126
               D  +LQISG+R      + EN++ +  KW RVER  GKF RRFRLPEN K  EV+A
Sbjct: 82  E---DKNVLQISGER------SKENEEKND-KWHRVERASGKFMRRFRLPENAKMEEVKA 141

Query: 127 AIENGVLTVTVPKEEMMKPGKKVIEI 140
            +ENGVLTV VPK    KP  K I+I
Sbjct: 142 TMENGVLTVVVPKAPEKKPQVKSIDI 157

[Close]

BLAST of ClCG05G013080 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-26
Identity = 67/149 (44.97%), Postives = 86/149 (57.72%), Query Frame = 1


Query: 4   ILNDLFDPFLYMI------------NQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKV 63
           I N++FDPF   +            +   + N  +DWKET  AHVF ADLPG+KKE+VKV
Sbjct: 14  INNNIFDPFSLDVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKV 73

Query: 64  EVMEDGDGRLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEV 123
           E+ +D    +L+ISG+R        +        W RVER  G F R+FRLPENVK  +V
Sbjct: 74  EIEDDS---VLKISGERHVEKEEKQDT-------WHRVERSSGGFSRKFRLPENVKMDQV 133

Query: 124 RAAIENGVLTVTVPKEEMMKPGKKVIEIE 141
           +A++ENGVLTVTVPK E  K   +V  I+
Sbjct: 134 KASMENGVLTVTVPKVETNKKKAQVKSID 152

[Close]

BLAST of ClCG05G013080 vs. NCBI nr
Match: gi|659098234|ref|XP_008450042.1| (PREDICTED: class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 251.9 bits (642), Expect = 6.6e-64
Identity = 124/141 (87.94%), Postives = 131/141 (92.91%), Query Frame = 1


Query: 1   MSLILNDLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGR 60
           MSLILN++FDPFL MINQCPVLNTP DWKETPAAHVFIADLPGLKK+QVKVEVMEDGDGR
Sbjct: 1   MSLILNEIFDPFLSMINQCPVLNTPTDWKETPAAHVFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRG-DATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGV 120
           LLQISGDRG DAT AND+ND+SSGHKWRRVERCRGKFCRRFRLP NVKA EV AA+ENGV
Sbjct: 61  LLQISGDRGDDATAANDKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVSAAMENGV 120

Query: 121 LTVTVPKEEMMKPGKKVIEIE 141
           L VTVPKEE+ KP KKVIEIE
Sbjct: 121 LRVTVPKEEVKKPEKKVIEIE 141

[Close]

BLAST of ClCG05G013080 vs. NCBI nr
Match: gi|449455970|ref|XP_004145723.1| (PREDICTED: class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 9.5e-63
Identity = 123/144 (85.42%), Postives = 133/144 (92.36%), Query Frame = 1


Query: 1   MSLILNDLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGR 60
           MSLIL+++FDPFL MINQCPVLNTP DWKETPAAH+FIADLPGLKK+QVKVEVMEDGDGR
Sbjct: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRG-DATTAND-ENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENG 120
           LLQISGDRG DAT  ND +ND+SSGHKWRRVERCRGKFCRRFRLP NVKA EVRAA+ENG
Sbjct: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120

Query: 121 VLTVTVPKEEMMKPGKKVIEIETV 143
           VL VTVPKEE+ KP KKVIEIET+
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIETL 144

[Close]

BLAST of ClCG05G013080 vs. NCBI nr
Match: gi|703157183|ref|XP_010111660.1| (hypothetical protein L484_017688 [Morus notabilis])

HSP 1 Score: 182.6 bits (462), Expect = 4.9e-43
Identity = 91/146 (62.33%), Postives = 114/146 (78.08%), Query Frame = 1


Query: 1   MSLILN----DLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMED 60
           MS+I N    ++ DPFL MIN+CPVLNTP DWKETP AHVF+ADLPGLKKE+VKVEV  D
Sbjct: 1   MSIISNLFGGEILDPFLSMINKCPVLNTPTDWKETPEAHVFVADLPGLKKEEVKVEVDHD 60

Query: 61  GDG--RLLQISGDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAA 120
            DG  ++LQISG+R +     D+ +K++  KW RVERCRGKF RRFRLPEN K  E++A+
Sbjct: 61  RDGNHKVLQISGERKNEEVDKDDKNKNN-EKWHRVERCRGKFFRRFRLPENAKVDEIKAS 120

Query: 121 IENGVLTVTVPKEEMMKPGKKVIEIE 141
           +ENGVLTVT+PK+E+ K  +KV+ IE
Sbjct: 121 VENGVLTVTIPKKEVKKLERKVVPIE 145

[Close]

BLAST of ClCG05G013080 vs. NCBI nr
Match: gi|743933269|ref|XP_011010947.1| (PREDICTED: class I heat shock protein-like [Populus euphratica])

HSP 1 Score: 179.5 bits (454), Expect = 4.2e-42
Identity = 87/137 (63.50%), Postives = 109/137 (79.56%), Query Frame = 1


Query: 6   NDLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGRLLQIS 65
           +++FDPFL MIN+CPVLNTP DWKETP AHVF++DLPGLKKE+V VEV++  +G++LQIS
Sbjct: 10  DEIFDPFLSMINKCPVLNTPTDWKETPDAHVFVSDLPGLKKEEVMVEVVD--EGKVLQIS 69

Query: 66  GDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGVLTVTVP 125
           GDR +   + D    +   KW  VERCRGKF RRFRLP N K+ EV+A++ENGVL VTVP
Sbjct: 70  GDRKNEEISED----NKNDKWHHVERCRGKFLRRFRLPGNAKSDEVKASMENGVLVVTVP 129

Query: 126 KEEMMKPGKKVIEIETV 143
           K+E+ KP KKVIEIE +
Sbjct: 130 KQEVKKPEKKVIEIEEI 140

[Close]

BLAST of ClCG05G013080 vs. NCBI nr
Match: gi|743938431|ref|XP_011013640.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica])

HSP 1 Score: 179.5 bits (454), Expect = 4.2e-42
Identity = 87/137 (63.50%), Postives = 109/137 (79.56%), Query Frame = 1


Query: 6   NDLFDPFLYMINQCPVLNTPIDWKETPAAHVFIADLPGLKKEQVKVEVMEDGDGRLLQIS 65
           +++FDPFL MIN+CPVLNTP DWKETP AHVF++DLPGLKKE+V VEV++  +G++LQIS
Sbjct: 58  DEIFDPFLSMINKCPVLNTPTDWKETPDAHVFVSDLPGLKKEEVTVEVVD--EGKVLQIS 117

Query: 66  GDRGDATTANDENDKSSGHKWRRVERCRGKFCRRFRLPENVKAGEVRAAIENGVLTVTVP 125
           GDR +   + D    +   KW  VERCRGKF RRFRLP N K+ EV+A++ENGVL VTVP
Sbjct: 118 GDRKNEEISED----NKNDKWHHVERCRGKFLRRFRLPGNAKSDEVKASMENGVLVVTVP 177

Query: 126 KEEMMKPGKKVIEIETV 143
           K+E+ KP KKVIEIE +
Sbjct: 178 KQEVKKPEKKVIEIEEI 188

The following BLAST results are available for this feature:

BLAST of ClCG05G013080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP11_SOLPE	3.5e-33	59.29	17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1	[more]
HSP11_MEDSA	3.9e-32	62.50	18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=...	[more]
HSP12_SOLPE	3.9e-32	57.86	17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1	[more]
HSP11_SOLLC	3.9e-32	57.14	17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1	[more]
HSP14_SOYBN	8.7e-32	53.90	17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1	[more]

BLAST of ClCG05G013080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Q9_CUCSA	6.6e-63	85.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G595190 PE=3 SV=1	[more]
W9S8M5_9ROSA	3.4e-43	62.33	Uncharacterized protein OS=Morus notabilis GN=L484_017688 PE=3 SV=1	[more]
B9GIX7_POPTR	4.9e-42	61.43	17.5 kd heat shock family protein OS=Populus trichocarpa GN=POPTR_0001s35990g PE...	[more]
B9SLT1_RICCO	1.9e-41	60.00	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0531010 PE=3 SV=1	[more]
A0A061ECH5_THECC	3.2e-41	63.50	HSP20-like chaperones superfamily protein OS=Theobroma cacao GN=TCM_017043 PE=3 ...	[more]

BLAST of ClCG05G013080 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53540.1	2.7e-31	51.39	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	1.3e-30	52.52	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	5.1e-30	58.12	heat shock protein 17.4	[more]
AT5G59720.1	1.5e-29	52.05	heat shock protein 18.2	[more]
AT1G59860.1	2.0e-26	44.97	HSP20-like chaperones superfamily protein	[more]

BLAST of ClCG05G013080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098234\|ref\|XP_008450042.1\|	6.6e-64	87.94	PREDICTED: class I heat shock protein-like [Cucumis melo]	[more]
gi\|449455970\|ref\|XP_004145723.1\|	9.5e-63	85.42	PREDICTED: class I heat shock protein-like [Cucumis sativus]	[more]
gi\|703157183\|ref\|XP_010111660.1\|	4.9e-43	62.33	hypothetical protein L484_017688 [Morus notabilis]	[more]
gi\|743933269\|ref\|XP_011010947.1\|	4.2e-42	63.50	PREDICTED: class I heat shock protein-like [Populus euphratica]	[more]
gi\|743938431\|ref\|XP_011013640.1\|	4.2e-42	63.50	PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009408	response to heat
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G013080.1	ClCG05G013080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 27..139 score: 9.8
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 27..126 score: 21
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 16..140 score: 7.6
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 10..139 score: 8.37
None	No IPR available	PANTHER	PTHR11527:SF126	SUBFAMILY NOT NAMED	coord: 23..140 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G013080	Csa3G595190	Cucumber (Chinese Long) v2	cuwcgB232
ClCG05G013080	MELO3C014827	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G013080	Cla001268	Watermelon (97103) v1	wcgwmB293
ClCG05G013080	Cla97C05G094650	Watermelon (97103) v2	wcgwmbB229
ClCG05G013080	Bhi01G001565	Wax gourd	wcgwgoB429
ClCG05G013080	CSPI03G25970	Wild cucumber (PI 183967)	cpiwcgB239
ClCG05G013080	Cucsa.156260	Cucumber (Gy14) v1	cgywcgB261
ClCG05G013080	Lsi05G004790	Bottle gourd (USVL1VR-Ls)	lsiwcgB332
ClCG05G013080	CsGy3G024320	Cucumber (Gy14) v2	cgybwcgB216
ClCG05G013080	MELO3C014827.2	Melon (DHL92) v3.6.1	medwcgB425
ClCG05G013080	CsaV3_3G027480	Cucumber (Chinese Long) v3	cucwcgB240

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G013080	Cucurbita maxima (Rimu)	cmawcgB120
ClCG05G013080	Cucurbita maxima (Rimu)	cmawcgB231
ClCG05G013080	Cucurbita moschata (Rifu)	cmowcgB112
ClCG05G013080	Cucurbita moschata (Rifu)	cmowcgB215
ClCG05G013080	Wild cucumber (PI 183967)	cpiwcgB068
ClCG05G013080	Cucumber (Chinese Long) v2	cuwcgB065
ClCG05G013080	Melon (DHL92) v3.5.1	mewcgB252
ClCG05G013080	Watermelon (97103) v1	wcgwmB289
ClCG05G013080	Watermelon (97103) v1	wcgwmB310
ClCG05G013080	Cucurbita pepo (Zucchini)	cpewcgB555
ClCG05G013080	Cucurbita pepo (Zucchini)	cpewcgB613
ClCG05G013080	Bottle gourd (USVL1VR-Ls)	lsiwcgB369
ClCG05G013080	Cucumber (Gy14) v2	cgybwcgB062
ClCG05G013080	Melon (DHL92) v3.6.1	medwcgB244
ClCG05G013080	Silver-seed gourd	carwcgB0361
ClCG05G013080	Silver-seed gourd	carwcgB0428
ClCG05G013080	Cucumber (Chinese Long) v3	cucwcgB072
ClCG05G013080	Watermelon (97103) v2	wcgwmbB236
ClCG05G013080	Watermelon (Charleston Gray)	wcgwcgB157