Cucsa.156260 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTGATTCTCCACGAAATCTTCGATCCATTTCTTTCTATGATTAACCAATGTCCTGTTTTAAATACCCCCACTGACTGGAAAGAGACTCCGGCTGCTCACATCTTCATCGCGGATTTGCCCGGGTTGAAGAAAGATCAGGTAAGACGACATAGCCATTTGCGACCATCACTTTCTAGCATGTTGTTAAATATTATACAAAATATATATCGCTAAATTTTTAATTATATGTTTTCAAAATTAAGGTCAATAAGTTGTAAAAATTAAAAACCGAAAAAGTAAAATGATAATCTTTTCAAATGGAGCTTAAATTTTAAAGATATGTTCCATTCAAATTGATTGGTGATCCATGAACTTTCAAAATTTCGAGTTCCTGAAACTCGAGTGTGTACCAAAACCCATTTTGTTAATGGCCTTGTTTGGATCTCGGTCGAGTAGGTCAAGGTAGAGGTGATGGAGGATGGTGATGGACGGCTGCTGCAGATAAGCGGAGATAGAGGAGACGACGCTACTGCCGGTAATGACAAGAAAAACGATGAGAGTAGTGGTCATAAATGGCGTCGTGTGGAGCGTTGCCGGGGGAAATTCTGCAGGAGGTTCCGACTGCCGGGGAATGTGAAGGCGGATGAAGTGAGGGCGGCGATGGAGAACGGAGTTTTGAGAGTGACGGTGCCAAAAGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATCGAGATTGAAACACTGTAG ATGTCTTTGATTCTCCACGAAATCTTCGATCCATTTCTTTCTATGATTAACCAATGTCCTGTTTTAAATACCCCCACTGACTGGAAAGAGACTCCGGCTGCTCACATCTTCATCGCGGATTTGCCCGGGTTGAAGAAAGATCAGGTCAAGGTAGAGGTGATGGAGGATGGTGATGGACGGCTGCTGCAGATAAGCGGAGATAGAGGAGACGACGCTACTGCCGGTAATGACAAGAAAAACGATGAGAGTAGTGGTCATAAATGGCGTCGTGTGGAGCGTTGCCGGGGGAAATTCTGCAGGAGGTTCCGACTGCCGGGGAATGTGAAGGCGGATGAAGTGAGGGCGGCGATGGAGAACGGAGTTTTGAGAGTGACGGTGCCAAAAGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATCGAGATTGAAACACTGTAG ATGTCTTTGATTCTCCACGAAATCTTCGATCCATTTCTTTCTATGATTAACCAATGTCCTGTTTTAAATACCCCCACTGACTGGAAAGAGACTCCGGCTGCTCACATCTTCATCGCGGATTTGCCCGGGTTGAAGAAAGATCAGGTCAAGGTAGAGGTGATGGAGGATGGTGATGGACGGCTGCTGCAGATAAGCGGAGATAGAGGAGACGACGCTACTGCCGGTAATGACAAGAAAAACGATGAGAGTAGTGGTCATAAATGGCGTCGTGTGGAGCGTTGCCGGGGGAAATTCTGCAGGAGGTTCCGACTGCCGGGGAATGTGAAGGCGGATGAAGTGAGGGCGGCGATGGAGAACGGAGTTTTGAGAGTGACGGTGCCAAAAGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATCGAGATTGAAACACTGTAG MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEIETL*
BLAST of Cucsa.156260 vs. Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-32 Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 1
BLAST of Cucsa.156260 vs. Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-32 Identity = 79/142 (55.63%), Postives = 93/142 (65.49%), Query Frame = 1
BLAST of Cucsa.156260 vs. Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.3e-32 Identity = 79/142 (55.63%), Postives = 95/142 (66.90%), Query Frame = 1
BLAST of Cucsa.156260 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.2e-32 Identity = 73/120 (60.83%), Postives = 88/120 (73.33%), Query Frame = 1
BLAST of Cucsa.156260 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 6.8e-32 Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 1
BLAST of Cucsa.156260 vs. TrEMBL
Match: A0A0A0L8Q9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G595190 PE=3 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 1.7e-77 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
BLAST of Cucsa.156260 vs. TrEMBL
Match: B9GIX7_POPTR (17.5 kd heat shock family protein OS=Populus trichocarpa GN=POPTR_0001s35990g PE=3 SV=2) HSP 1 Score: 197.2 bits (500), Expect = 1.4e-47 Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 1
BLAST of Cucsa.156260 vs. TrEMBL
Match: W9S8M5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017688 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 4.9e-45 Identity = 94/139 (67.63%), Postives = 114/139 (82.01%), Query Frame = 1
BLAST of Cucsa.156260 vs. TrEMBL
Match: A0A061ECH5_THECC (HSP20-like chaperones superfamily protein OS=Theobroma cacao GN=TCM_017043 PE=3 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 8.3e-45 Identity = 93/138 (67.39%), Postives = 113/138 (81.88%), Query Frame = 1
BLAST of Cucsa.156260 vs. TrEMBL
Match: B9SLT1_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0531010 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.1e-44 Identity = 86/136 (63.24%), Postives = 109/136 (80.15%), Query Frame = 1
BLAST of Cucsa.156260 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 138.3 bits (347), Expect = 3.8e-33 Identity = 75/146 (51.37%), Postives = 95/146 (65.07%), Query Frame = 1
BLAST of Cucsa.156260 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-30 Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 1
BLAST of Cucsa.156260 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2) HSP 1 Score: 129.4 bits (324), Expect = 1.8e-30 Identity = 70/119 (58.82%), Postives = 82/119 (68.91%), Query Frame = 1
BLAST of Cucsa.156260 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4) HSP 1 Score: 129.0 bits (323), Expect = 2.3e-30 Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 1
BLAST of Cucsa.156260 vs. TAIR10
Match: AT1G59860.1 (AT1G59860.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 115.9 bits (289), Expect = 2.0e-26 Identity = 64/140 (45.71%), Postives = 89/140 (63.57%), Query Frame = 1
BLAST of Cucsa.156260 vs. NCBI nr
Match: gi|449455970|ref|XP_004145723.1| (PREDICTED: class I heat shock protein-like [Cucumis sativus]) HSP 1 Score: 296.6 bits (758), Expect = 2.4e-77 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 1
BLAST of Cucsa.156260 vs. NCBI nr
Match: gi|659098234|ref|XP_008450042.1| (PREDICTED: class I heat shock protein-like [Cucumis melo]) HSP 1 Score: 279.6 bits (714), Expect = 3.0e-72 Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 1
BLAST of Cucsa.156260 vs. NCBI nr
Match: gi|743938431|ref|XP_011013640.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]) HSP 1 Score: 198.7 bits (504), Expect = 6.8e-48 Identity = 98/138 (71.01%), Postives = 117/138 (84.78%), Query Frame = 1
BLAST of Cucsa.156260 vs. NCBI nr
Match: gi|743933269|ref|XP_011010947.1| (PREDICTED: class I heat shock protein-like [Populus euphratica]) HSP 1 Score: 198.7 bits (504), Expect = 6.8e-48 Identity = 98/138 (71.01%), Postives = 117/138 (84.78%), Query Frame = 1
BLAST of Cucsa.156260 vs. NCBI nr
Match: gi|566153029|ref|XP_002298579.2| (17.5 kd heat shock family protein [Populus trichocarpa]) HSP 1 Score: 197.2 bits (500), Expect = 2.0e-47 Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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