CsGy3G024320 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G024320
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	class I heat shock protein-like
Location	Chr3 : 24344423 .. 24345548 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCGCAACAGAAAATAATTTTAAAAAACCCAAAACAAATACACCAAAAATCTGATCCGCATTTCTCAAATCAGTTCTCACATCTCTCTATCTTCATTGGAAACATGTCTTTGATTCTCCACGAAATCTTCGATCCATTTCTTTCTATGATTAACCAATGTCCTGTTTTAAATACCCCCACTGACTGGAAAGAGACTCCGGCTGCTCACATCTTCATCGCGGATTTGCCCGGGTTGAAGAAAGATCAGGTAAGACGACATAGCCATTTGCGACCATCACTTTCTAGCATGTTGTTAAATATTATACAAAATATATATCGCTAAATTTTTAATTATATGTTTTCAAAATTAAGGTCAATAAGTTGTAAAAATTAAAAACCGAAAAAGTAAAATGATAATCTTTTCAAATGGAGCTTAAATTTTAAAGATATGTTCCATTCAAATTGATTGGTGATCCATGAACTTTCAAAATTTCGAGTTCCTGAAACTCGAGTGTGTACCAAAACCCATTTTGTTAATGGCCTTGTTTGGATCTCGGTCGAGTAGGTCAAGGTAGAGGTGATGGAGGATGGTGATGGACGGCTGCTGCAGATAAGCGGAGATAGAGGAGACGACGCTACTGCCGGTAATGACAAGAAAAACGATGAGAGTAGTGGTCATAAATGGCGTCGTGTGGAGCGTTGCCGGGGGAAATTCTGCAGGAGGTTCCGACTGCCGGGGAATGTGAAGGCGGATGAAGTGAGGGCGGCGATGGAGAACGGAGTTTTGAGAGTGACGGTGCCAAAAGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATCGAGATTGAAACACTGTAGGAGCTTTGGGTCAAAGTTTGACTTCTTTTTTCTTTTCTTGTGCTAAGAATGTGTATTATGCATGATGGTGTGGCGCAGTATCTGATCAATATGTTTGTATTTCGTTTTCCTTTCTTTTTTCAAAAGAGAAAATTGTGTGTGAAATTAAGAAGTAAATAAATAGAGTCGCTTATAATATGGATAATGATCTTACACAGTGGTTTGGAACATGAGTTAATTAAATTTGTCTAAAATTTTGACTTCTCAATTTTACGAAAATAATGATAAACAAATCTCAATAAATATTGTAA

mRNA sequence

TACCGCAACAGAAAATAATTTTAAAAAACCCAAAACAAATACACCAAAAATCTGATCCGCATTTCTCAAATCAGTTCTCACATCTCTCTATCTTCATTGGAAACATGTCTTTGATTCTCCACGAAATCTTCGATCCATTTCTTTCTATGATTAACCAATGTCCTGTTTTAAATACCCCCACTGACTGGAAAGAGACTCCGGCTGCTCACATCTTCATCGCGGATTTGCCCGGGTTGAAGAAAGATCAGGTCAAGGTAGAGGTGATGGAGGATGGTGATGGACGGCTGCTGCAGATAAGCGGAGATAGAGGAGACGACGCTACTGCCGGTAATGACAAGAAAAACGATGAGAGTAGTGGTCATAAATGGCGTCGTGTGGAGCGTTGCCGGGGGAAATTCTGCAGGAGGTTCCGACTGCCGGGGAATGTGAAGGCGGATGAAGTGAGGGCGGCGATGGAGAACGGAGTTTTGAGAGTGACGGTGCCAAAAGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATCGAGATTGAAACACTGTAGGAGCTTTGGGTCAAAGTTTGACTTCTTTTTTCTTTTCTTGTGCTAAGAATGTGTATTATGCATGATGGTGTGGCGCAGTATCTGATCAATATGTTTGTATTTCGTTTTCCTTTCTTTTTTCAAAAGAGAAAATTGTGTGTGAAATTAAGAAGTAAATAAATAGAGTCGCTTATAATATGGATAATGATCTTACACAGTGGTTTGGAACATGAGTTAATTAAATTTGTCTAAAATTTTGACTTCTCAATTTTACGAAAATAATGATAAACAAATCTCAATAAATATTGTAA

Coding sequence (CDS)

ATGTCTTTGATTCTCCACGAAATCTTCGATCCATTTCTTTCTATGATTAACCAATGTCCTGTTTTAAATACCCCCACTGACTGGAAAGAGACTCCGGCTGCTCACATCTTCATCGCGGATTTGCCCGGGTTGAAGAAAGATCAGGTCAAGGTAGAGGTGATGGAGGATGGTGATGGACGGCTGCTGCAGATAAGCGGAGATAGAGGAGACGACGCTACTGCCGGTAATGACAAGAAAAACGATGAGAGTAGTGGTCATAAATGGCGTCGTGTGGAGCGTTGCCGGGGGAAATTCTGCAGGAGGTTCCGACTGCCGGGGAATGTGAAGGCGGATGAAGTGAGGGCGGCGATGGAGAACGGAGTTTTGAGAGTGACGGTGCCAAAAGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATCGAGATTGAAACACTGTAG

Protein sequence

MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEIETL

Homology

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BLAST of CsGy3G024320 vs. NCBI nr
Match: XP_004145723.1 (PREDICTED: class I heat shock protein-like [Cucumis sativus] >KGN58218.1 hypothetical protein Csa_3G595190 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 3.3e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG
Sbjct: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKEEVKKPEKKVIEIETL
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIETL 144

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BLAST of CsGy3G024320 vs. NCBI nr
Match: XP_008450042.1 (PREDICTED: class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 4.2e-70
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLIL+EIFDPFLSMINQCPVLNTPTDWKETPAAH+FIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILNEIFDPFLSMINQCPVLNTPTDWKETPAAHVFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATA ND KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEV AAMENG
Sbjct: 61  LLQISGDRGDDATAAND-KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVSAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKEEVKKPEKKVIEIE L
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIEGL 143

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BLAST of CsGy3G024320 vs. NCBI nr
Match: XP_011010947.1 (PREDICTED: class I heat shock protein-like [Populus euphratica])

HSP 1 Score: 194.1 bits (492), Expect = 3.2e-46
Identity = 98/138 (71.01%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 7   EIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISG 66
           EIFDPFLSMIN+CPVLNTPTDWKETP AH+F++DLPGLKK++V VEV++  +G++LQISG
Sbjct: 11  EIFDPFLSMINKCPVLNTPTDWKETPDAHVFVSDLPGLKKEEVMVEVVD--EGKVLQISG 70

Query: 67  DRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTV 126
           DR ++  +  D KND     KW  VERCRGKF RRFRLPGN K+DEV+A+MENGVL VTV
Sbjct: 71  DRKNEEIS-EDNKND-----KWHHVERCRGKFLRRFRLPGNAKSDEVKASMENGVLVVTV 130

Query: 127 PKEEVKKPEKKVIEIETL 145
           PK+EVKKPEKKVIEIE +
Sbjct: 131 PKQEVKKPEKKVIEIEEI 140

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BLAST of CsGy3G024320 vs. NCBI nr
Match: XP_011013640.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica])

HSP 1 Score: 194.1 bits (492), Expect = 3.2e-46
Identity = 98/138 (71.01%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 7   EIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISG 66
           EIFDPFLSMIN+CPVLNTPTDWKETP AH+F++DLPGLKK++V VEV++  +G++LQISG
Sbjct: 59  EIFDPFLSMINKCPVLNTPTDWKETPDAHVFVSDLPGLKKEEVTVEVVD--EGKVLQISG 118

Query: 67  DRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTV 126
           DR ++  +  D KND     KW  VERCRGKF RRFRLPGN K+DEV+A+MENGVL VTV
Sbjct: 119 DRKNEEIS-EDNKND-----KWHHVERCRGKFLRRFRLPGNAKSDEVKASMENGVLVVTV 178

Query: 127 PKEEVKKPEKKVIEIETL 145
           PK+EVKKPEKKVIEIE +
Sbjct: 179 PKQEVKKPEKKVIEIEEI 188

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BLAST of CsGy3G024320 vs. NCBI nr
Match: XP_002298579.2 (class I heat shock protein [Populus trichocarpa] >PNS22664.1 hypothetical protein POPTR_T125900v3 [Populus trichocarpa])

HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45
Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 3   LILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLL 62
           L + EIFDPFLSMIN+CPVLNTPTDWKETP AHIF++DLPGLKK++V VEV++  +G++L
Sbjct: 7   LCVDEIFDPFLSMINKCPVLNTPTDWKETPDAHIFVSDLPGLKKEEVTVEVVD--EGKVL 66

Query: 63  QISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVL 122
           QISGDR       N++ ++++   KW  VERCRGKF RRFRLPGN K+DEV+A+M+NGVL
Sbjct: 67  QISGDR------KNEEISEDNKTDKWHHVERCRGKFLRRFRLPGNAKSDEVKASMDNGVL 126

Query: 123 RVTVPKEEVKKPEKKVIEIETL 145
            VTVPK+EVKKPEKKVIEIE +
Sbjct: 127 VVTVPKQEVKKPEKKVIEIEEI 140

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BLAST of CsGy3G024320 vs. TAIR10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-31
Identity = 75/146 (51.37%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 7   EIFDPFLSMINQCPVLNTP-----------TDWKETPAAHIFIADLPGLKKDQVKVEVME 66
           ++FDPF   +    + N P            DW+ETP AH+F ADLPGL+K++VKVEV  
Sbjct: 22  DVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEV-- 81

Query: 67  DGDGRLLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRA 126
             DG +LQISG+R ++    N++KND     KW RVER  GKF RRFRLP N K +E++A
Sbjct: 82  -EDGNILQISGERSNE----NEEKND-----KWHRVERSSGKFTRRFRLPENAKMEEIKA 141

Query: 127 AMENGVLRVTVPKEEVKKPEKKVIEI 142
           +MENGVL VTVPK   KKPE K I+I
Sbjct: 142 SMENGVLSVTVPKVPEKKPEVKSIDI 155

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BLAST of CsGy3G024320 vs. TAIR10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 124.8 bits (312), Expect = 4.3e-29
Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 7   EIFDPFLSMIN------QCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 66
           +++DPF  + +         ++N   DW+ETP AH+F ADLPGLKK++VKVE+ ED    
Sbjct: 23  DVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDS--- 82

Query: 67  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 126
           +L+ISG+R  +     + KND      W RVER  G+F RRFRLP NVK D+V+AAMENG
Sbjct: 83  VLKISGERHVE----KEDKND-----TWHRVERSSGQFTRRFRLPENVKMDQVKAAMENG 142

Query: 127 VLRVTVPKEEVKKPEKKVIEI 142
           VL VTVPK E KK + K I+I
Sbjct: 143 VLTVTVPKAETKKADVKSIQI 151

[Close]

BLAST of CsGy3G024320 vs. TAIR10
Match: AT5G59720.1 (heat shock protein 18.2)

HSP 1 Score: 124.0 bits (310), Expect = 7.4e-29
Identity = 70/119 (58.82%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 23  NTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKNDE 82
           N   DWKETP AH+F ADLPGLKK++VKVEV    D  +LQISG+R  +    N++KND 
Sbjct: 51  NARVDWKETPEAHVFKADLPGLKKEEVKVEV---EDKNVLQISGERSKE----NEEKND- 110

Query: 83  SSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 142
               KW RVER  GKF RRFRLP N K +EV+A MENGVL V VPK   KKP+ K I+I
Sbjct: 111 ----KWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDI 157

[Close]

BLAST of CsGy3G024320 vs. TAIR10
Match: AT3G46230.1 (heat shock protein 17.4)

HSP 1 Score: 123.6 bits (309), Expect = 9.7e-29
Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 23  NTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKNDE 82
           N   DW+ETP AH+F AD+PGLKK++VKVEV    DG +LQISG+R  +    N++K+D 
Sbjct: 48  NAKVDWRETPEAHVFKADVPGLKKEEVKVEV---EDGNILQISGERSSE----NEEKSD- 107

Query: 83  SSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 142
                W RVER  GKF RRFRLP N K +EV+A+MENGVL VTVPK +  KPE K ++I
Sbjct: 108 ----TWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDI 154

[Close]

BLAST of CsGy3G024320 vs. TAIR10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 110.9 bits (276), Expect = 6.5e-25
Identity = 64/140 (45.71%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 7   EIFDPFLSM----INQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLL 66
           +++DPF  +     +   + N   DWKET  AH+F ADLPG+KK++VKVE+ +D    +L
Sbjct: 25  DVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDS---VL 84

Query: 67  QISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVL 126
           +ISG+R  +     ++K D      W RVER  G F R+FRLP NVK D+V+A+MENGVL
Sbjct: 85  KISGERHVE----KEEKQD-----TWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVL 144

Query: 127 RVTVPKEEVKKPEKKVIEIE 143
            VTVPK E  K + +V  I+
Sbjct: 145 TVTVPKVETNKKKAQVKSID 152

[Close]

BLAST of CsGy3G024320 vs. Swiss-Prot
Match: sp|P30221|HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 2.0e-31
Identity = 79/142 (55.63%), Postives = 94/142 (66.20%), Query Frame = 0


Query: 7   EIFDPFLSM-------INQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDG 66
           ++FDPF  +              NT  DWKETP  H+F  DLPGLKK++VKVEV ED   
Sbjct: 23  DVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEED--- 82

Query: 67  RLLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMEN 126
           R+LQISG+R       N +K D++   KW R+ER  GKF RRFRLP N K D+V+A+MEN
Sbjct: 83  RVLQISGER-------NVEKEDKND--KWHRMERSSGKFMRRFRLPENAKMDQVKASMEN 142

Query: 127 GVLRVTVPKEEVKKPEKKVIEI 142
           GVL VTVPKEEVKKPE K IEI
Sbjct: 143 GVLTVTVPKEEVKKPEVKSIEI 152

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BLAST of CsGy3G024320 vs. Swiss-Prot
Match: sp|O82011|HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-31
Identity = 79/142 (55.63%), Postives = 96/142 (67.61%), Query Frame = 0


Query: 7   EIFDPFLSM-------INQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDG 66
           ++FDPF  +              NT  DWKETP AH+F ADLPGLK ++VKVEV ED   
Sbjct: 23  DVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEED--- 82

Query: 67  RLLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMEN 126
           R+LQISG+R       N +K D++   KW+RVER  GKF RRFRLP N K D+V+A+MEN
Sbjct: 83  RVLQISGER-------NMEKEDKND--KWQRVERSSGKFMRRFRLPENAKMDQVKASMEN 142

Query: 127 GVLRVTVPKEEVKKPEKKVIEI 142
           GVL VTVPKEE+KKP+ K IEI
Sbjct: 143 GVLTVTVPKEEMKKPDVKSIEI 152

[Close]

BLAST of CsGy3G024320 vs. Swiss-Prot
Match: sp|P27879|HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.8e-31
Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 22  LNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKND 81
           ++T  DWKETP AH+F ADLPGLKK++VKVE+ +D   R+LQISG+R  +     + KND
Sbjct: 34  VSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDD---RVLQISGERNVE----KEDKND 93

Query: 82  ESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 141
           +     W RVER  GKF RRFRLP N K D+V+AAMENGVL VTVPKEE+KKPE K IEI
Sbjct: 94  Q-----WHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPEVKSIEI 143

Query: 142 ET 144
            +
Sbjct: 154 SS 143

[Close]

BLAST of CsGy3G024320 vs. Swiss-Prot
Match: sp|P27880|HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.6e-31
Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 22  LNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKND 81
           ++T  DWKETP AH+F ADLPG+KK++VKVE+ +D   R+LQISG+R    +   + KND
Sbjct: 49  VSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDD---RVLQISGER----SVEKEDKND 108

Query: 82  ESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 141
           +     W R+ER  GKF RRFRLP N K D+V+AAMENGVL VTVPKEEVKKPE K I+I
Sbjct: 109 Q-----WHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDI 156

[Close]

BLAST of CsGy3G024320 vs. Swiss-Prot
Match: sp|P27396|HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.3e-30
Identity = 73/120 (60.83%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 22  LNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKND 81
           +NT  DWKETP AH+F ADLPGLKK++VKVE+ E   G++LQISG+R  +     ++KND
Sbjct: 48  VNTHIDWKETPQAHVFKADLPGLKKEEVKVELEE---GKVLQISGERNKE----KEEKND 107

Query: 82  ESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 141
                KW RVER  GKF RRFRLP N K DEV+AAM NGV+ VTVPK E+KKPE K I+I
Sbjct: 108 -----KWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDI 155

[Close]

BLAST of CsGy3G024320 vs. TrEMBL
Match: tr|A0A0A0L8Q9|A0A0A0L8Q9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G595190 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG
Sbjct: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKEEVKKPEKKVIEIETL
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIETL 144

[Close]

BLAST of CsGy3G024320 vs. TrEMBL
Match: tr|A0A1S3BNE8|A0A1S3BNE8_CUCME (class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103491749 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.8e-70
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLIL+EIFDPFLSMINQCPVLNTPTDWKETPAAH+FIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILNEIFDPFLSMINQCPVLNTPTDWKETPAAHVFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATA ND KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEV AAMENG
Sbjct: 61  LLQISGDRGDDATAAND-KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVSAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKEEVKKPEKKVIEIE L
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIEGL 143

[Close]

BLAST of CsGy3G024320 vs. TrEMBL
Match: tr|B9GIX7|B9GIX7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T125900v3 PE=3 SV=2)

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45
Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 0


Query: 3   LILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLL 62
           L + EIFDPFLSMIN+CPVLNTPTDWKETP AHIF++DLPGLKK++V VEV++  +G++L
Sbjct: 7   LCVDEIFDPFLSMINKCPVLNTPTDWKETPDAHIFVSDLPGLKKEEVTVEVVD--EGKVL 66

Query: 63  QISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVL 122
           QISGDR       N++ ++++   KW  VERCRGKF RRFRLPGN K+DEV+A+M+NGVL
Sbjct: 67  QISGDR------KNEEISEDNKTDKWHHVERCRGKFLRRFRLPGNAKSDEVKASMDNGVL 126

Query: 123 RVTVPKEEVKKPEKKVIEIETL 145
            VTVPK+EVKKPEKKVIEIE +
Sbjct: 127 VVTVPKQEVKKPEKKVIEIEEI 140

[Close]

BLAST of CsGy3G024320 vs. TrEMBL
Match: tr|A0A2C9UG06|A0A2C9UG06_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G154400 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.0e-44
Identity = 100/139 (71.94%), Postives = 112/139 (80.58%), Query Frame = 0


Query: 3   LILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLL 62
           L + EIFDPFLSMIN+CPVLNTPTDWKETP AH+FI+DLPGLKK+ VKVEV E   GR+L
Sbjct: 8   LCVDEIFDPFLSMINKCPVLNTPTDWKETPEAHVFISDLPGLKKEDVKVEVDE---GRVL 67

Query: 63  QISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVL 122
           QISG+R    +A  D +ND     KW RVERCRGKF RRFRLP N K D+V+A+MENGVL
Sbjct: 68  QISGER---PSADKDGEND-----KWHRVERCRGKFLRRFRLPENAKIDQVKASMENGVL 127

Query: 123 RVTVPKEEVKKPEKKVIEI 142
            VTVPKEEVKKP KKVIEI
Sbjct: 128 VVTVPKEEVKKPGKKVIEI 135

[Close]

BLAST of CsGy3G024320 vs. TrEMBL
Match: tr|V4W3A2|V4W3A2_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017121mg PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.2e-43
Identity = 93/137 (67.88%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 6   HEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQIS 65
           +E FDPFLS++N+CPVLNTPTDWKETP AH+F ADLPGLKKD+VKVEV E   GR+LQIS
Sbjct: 12  NEPFDPFLSLVNKCPVLNTPTDWKETPEAHVFTADLPGLKKDEVKVEVDE---GRVLQIS 71

Query: 66  GDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVT 125
           G+R         K + ES G  W RVERCRG+F RRF+LP N K DEV+A+MENGVL V 
Sbjct: 72  GER---------KADGESDGDTWHRVERCRGRFMRRFKLPENAKTDEVKASMENGVLVVK 131

Query: 126 VPKEEVKKPEKKVIEIE 143
           +PK+EVKKPEKKVIEI+
Sbjct: 132 IPKQEVKKPEKKVIEIQ 136

The following BLAST results are available for this feature:

BLAST of CsGy3G024320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145723.1	3.3e-75	100.00	PREDICTED: class I heat shock protein-like [Cucumis sativus] >KGN58218.1 hypothe...	[more]
XP_008450042.1	4.2e-70	95.83	PREDICTED: class I heat shock protein-like [Cucumis melo]	[more]
XP_011010947.1	3.2e-46	71.01	PREDICTED: class I heat shock protein-like [Populus euphratica]	[more]
XP_011013640.1	3.2e-46	71.01	PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]	[more]
XP_002298579.2	1.6e-45	67.61	class I heat shock protein [Populus trichocarpa] >PNS22664.1 hypothetical protei...	[more]

BLAST of CsGy3G024320 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53540.1	1.2e-31	51.37	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	4.3e-29	50.35	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	7.4e-29	58.82	heat shock protein 18.2	[more]
AT3G46230.1	9.7e-29	56.30	heat shock protein 17.4	[more]
AT1G59860.1	6.5e-25	45.71	HSP20-like chaperones superfamily protein	[more]

BLAST of CsGy3G024320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P30221\|HSP11_SOLLC	2.0e-31	55.63	17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
sp\|O82011\|HSP11_SOLPE	2.6e-31	55.63	17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
sp\|P27879\|HSP11_MEDSA	5.8e-31	60.66	18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP...	[more]
sp\|P27880\|HSP12_MEDSA	7.6e-31	60.00	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
sp\|P27396\|HSP11_DAUCA	1.3e-30	60.83	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]

BLAST of CsGy3G024320 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L8Q9\|A0A0A0L8Q9_CUCSA	2.2e-75	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G595190 PE=3 SV=1	[more]
tr\|A0A1S3BNE8\|A0A1S3BNE8_CUCME	2.8e-70	95.83	class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103491749 PE=3 SV=...	[more]
tr\|B9GIX7\|B9GIX7_POPTR	1.1e-45	67.61	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T125900v3 PE=3 S...	[more]
tr\|A0A2C9UG06\|A0A2C9UG06_MANES	2.0e-44	71.94	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G154400 PE=3 SV=...	[more]
tr\|V4W3A2\|V4W3A2_9ROSI	2.2e-43	67.88	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017121mg PE=3 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR031107	HSP20
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009408	response to heat
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G024320.1	CsGy3G024320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 1..142 e-value: 6.3E-35 score: 122.0
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 12..141
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 27..141 e-value: 8.3E-22 score: 77.2
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 17..144 score: 25.388
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..87
None	No IPR available	PANTHER	PTHR11527:SF183	SUBFAMILY NOT NAMED	coord: 9..142
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY	coord: 9..142

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G024320	Csa3G595190	Cucumber (Chinese Long) v2	cgybcuB111
CsGy3G024320	MELO3C014827	Melon (DHL92) v3.5.1	cgybmeB213
CsGy3G024320	ClCG05G013080	Watermelon (Charleston Gray)	cgybwcgB216
CsGy3G024320	CSPI03G25970	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G024320	Lsi05G004790	Bottle gourd (USVL1VR-Ls)	cgyblsiB201
CsGy3G024320	MELO3C014827.2	Melon (DHL92) v3.6.1	cgybmedB204
CsGy3G024320	CsaV3_3G027480	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G024320	Cla97C05G094650	Watermelon (97103) v2	cgybwmbB208
CsGy3G024320	Bhi01G001565	Wax gourd	cgybwgoB273

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G024320	Cucumber (Gy14) v2	cgybcgybB015
CsGy3G024320	Cucurbita maxima (Rimu)	cgybcmaB296
CsGy3G024320	Cucurbita maxima (Rimu)	cgybcmaB298
CsGy3G024320	Cucurbita maxima (Rimu)	cgybcmaB319
CsGy3G024320	Cucurbita moschata (Rifu)	cgybcmoB264
CsGy3G024320	Cucurbita moschata (Rifu)	cgybcmoB266
CsGy3G024320	Cucurbita moschata (Rifu)	cgybcmoB291
CsGy3G024320	Cucurbita pepo (Zucchini)	cgybcpeB421
CsGy3G024320	Cucurbita pepo (Zucchini)	cgybcpeB402
CsGy3G024320	Cucurbita pepo (Zucchini)	cgybcpeB407
CsGy3G024320	Cucurbita pepo (Zucchini)	cgybcpeB414
CsGy3G024320	Cucumber (Chinese Long) v2	cgybcuB096
CsGy3G024320	Bottle gourd (USVL1VR-Ls)	cgyblsiB214
CsGy3G024320	Melon (DHL92) v3.5.1	cgybmeB165
CsGy3G024320	Melon (DHL92) v3.6.1	cgybmedB163
CsGy3G024320	Melon (DHL92) v3.6.1	cgybmedB217
CsGy3G024320	Watermelon (Charleston Gray)	cgybwcgB231
CsGy3G024320	Watermelon (97103) v1	cgybwmB263
CsGy3G024320	Wild cucumber (PI 183967)	cgybcpiB095
CsGy3G024320	Silver-seed gourd	carcgybB0375
CsGy3G024320	Silver-seed gourd	carcgybB0443
CsGy3G024320	Cucumber (Chinese Long) v3	cgybcucB101
CsGy3G024320	Watermelon (97103) v2	cgybwmbB223