ClCG05G011300 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G011300
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Importin, putative
Location	CG_Chr05 : 13320071 .. 13323564 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCGAAGCCAGTGGGCGCCCCTGATGGAAGGAAATCCCTAGACGGAATGCCAGGGGTCTGGAAGTTTTTGATATTCTCATTAATTCGGCCAAACACCCTCTCTTTCCTCTTCTCTTTCTTCATAACTTTTGCAGACCGCATCGACTTCAGCACGCCTATTGGGCTTTCTACGGCTGCCTCTTCGGTTTCCTCACACCATTTTGAATTTGCTTTACATTAATGCTTTTTCCTTCGTGACCATTTGCTGTCAACTTCGACCTTTTTCTGACTGTTGGACTCCCGACCAAGATTTTCGGTGGCTTTTCCTCCTGCCCCGATTGGGTCTATTCAAATTTCGAACTAAGCAGCTCCATTTTTGAGGGAGAAAAGACACCAACTTCATCTTCTTCAACTTTGCTCAAATGTACTTGGTCAATGGGATTTTTGAAATCGCTCCCAATAAATTCCTTGATAATGGAACTTGAATCTTTCATTGGTATGATGTCTTTAAAAAGTAAATGAATGGAACCTCTAAATTCATTGTTAATTTCGATTGTAGCTGGAATAAAGCCACAAACATTCTTTCTAACTTTAATTTTCGCCTCTGAAACGTCTAACAAATTCAGTGTTTCAATACTTATCTCCTCCAATCCTCCAAAGTGCTGCCCAATTGCTTCAAATGTTTCTCCGCTCCAATACTCCAGCGGTAAGTTCTTGATTGCAATCCATCCACCAAAGCTTCTTAAAACAGAGGGTCTACTGTGAAGTAATGGATTCCATTTTTCAAATAATAAATGAAATTTTCTATAATTAAACCATTTGCCGAGGGCTTCAATTAGATCTTCTATCTTCCCTTGGACTACTCGGATTAGAGCTTTGTCATCGAATAGGGGGTTGATTTTAACTTTCACATTGTATAAGACTTCTAAGAATTTGGCAATTTCCTTCCAATCATCAGAGGCAAGTAGCCTAGAGAGAACCCATAGGTTGTTAAAGTCTTCCTTGAAGACTTCTCTGTTTTTCCTAACCCAAAATTGCTGTTTGGGTGGAGCATAGTACTGGTCCTTTGCTGAGGTTTCCTTTGAACTCATTTTAAAATTCTTCTTGCTGTCTTTCTCCTTTTTTGCAACTCGTCGAGGTAGTATACTCTGTTCTATTGTTGCAGAAGCATGGAGCGCTTTTTGGATCTGAGTATCCTCTCTTATACTTAGATTTGTAGATGCCCAGACAGAGGAAAACAACTGACTTTTCCTTGTTGACACTACTTTAGCAAAGCTTGGTTGTATCAATGGTGATGAGTGGGAGCATTTCTGTTGATCCTTCTCAAAAATTGAACTTTCTCTGTGGTTTTCGAGTCGTTGTAGACTTCCTTTCAGCATTTTCAAGAACTCTGACCATCTATGTTGAGCTACTCCTTCTGGTACATGAATATAGAATCGCCCTCTGGAAATCAGCCAAACCACACATCTTAAATTCCATCCAGCCTTGGTCTTTAACTTCAAAATTCTTATTGTTCCTAAATCATCTCTCCATTCTCTTAGGAAAAAACGAATGCTTGAACCGTTGAGGAGGTCTTTGATTTGTTCTACCTTCCAAAGCAACTGCGATTTTGAGAGTTGGATTGATTTTCGAACTTCAACATCTTCTACTGAGAATTTTCCTTTTTCAAACCATGAACAGAAGAACACTCCATTGATTTTGCAGCTCACTACTTCCATGACTATTATTCTTGTGCCAATAATGTAATTAATCTAGAGCTATCAGCCGGAAGAGATCTGGCCGAGAGGGAGCAGAAATCGCCGGAGGGGAGGTGGAGAGGGGAAGAGAGAGGAGAGAGAGGAAAGAAGGGAGGAGAGAGGAGAGAGCACTTACCTTTCGACCCCTTTTAATCATAACTTAGACCGAGTCCAGTAGTTCAAAGGTTAATCCAGAATTTCAATCCCCACATTTGATGTATTATTCTGAAATGAAAAAGCATTGGACTCTAAGTTGTTTTGTTATTTCTCTTGGTTTTGCCTTTCCTTACTTTAACTTTGCAAAATGCTGGCATTGATTTGAGAGGAACAGTTTTTTATTTTTATTTTATTTTTCTACTGTTATTATTACTATGGTACTATGTTTTTATTAACTTGTCAAGTGATCAAGTCTCGTGCTTTCACTTTGACAGGTATTTTGTTTTAACAGCAAGTGACTTGGAGGAGTGGTATCAAAACCCCGAGTCTTTCCATCATGAGCAGGATATGGTTTTGTGGACGGAGAAACTACGACCATGTGCTGAAGCTTTATATATTGTATTGTTTGAAAACCATAGTCAGGTATGCAAGATTTGTTTTTACTTTTCCCGTATAATTATATACTTTAATTGTTTATACTTTTATAGTATTCATTTGTTTCTAAGTGAAATATGTGGTTATATGATATTGATGTTTCATATAGCTGCTCGGCCCTGTTGTGGTTTCTATCCTTCAAGAGGCAATGAATGGTTGCTCTAGTTTAGTGACTGAAATATCTCCAGGATTGCTTCTCAAAGATGCTGCTTATGGTGCTGCTGCATATGTTTATTATGAGCTTTCTAATTACCTGAGCTTCAAAGACTGGTATAAGCTTTTCCATTTATTAGTCTCTTTTCAGTCTATTCTTTATCTGTTCAGTTCGCTAATTGTTTTCGATTATGCAACTTCTTATTTACTGGTCTCTATTAGTAGGGGCATACTAAAGAGGATTACAATTCATCTACACTATTTTTGTTATAATGAAACAGTTTATTATATTATCTCCTACTATTCATTCCTAGGTTTAATGGTGCTTTATCCCTTGAGATCTCCAATGATCATCCAAACATGCGTATTATCCGTCGGAAAGTTGCACTAATATTGGGACAATGGGTTTCTGAGGTAATAGTCTTAATGTATACGTTCATATATTTGTATGAGGGATTCTTAACCTCTTGCAGTGTATGTTATAATGGTCAGTAAGTTGTAAATAATCTTGTGTTCTTTCATGTTATAATCTTGTATATAATCCTGTTGTTATAAAGTGCTATTGATCTGGAAGTTTTTACTACAATCTTGTGTTCTTTCATGTTATAAATTAAATTTTATTAAGGTTAAACACTCCGTAAGTAGATGGATTTTACTTTAAATGTGCTAGCTTGTTGGCAAATTGGCTTTGGCAAAATGAGAATTTAAAGACTCAGAATGTGCTAGCTTGTTGGGGGTTAGAAATTGAGAATTAAGGACTCACAAGAAACTCTTGTTGGCAAAATGACTTTGGTATGAGTAGCGAAGAACCTGATTCTCATCTTTCGAAAGCTGAAAATGTTGGGAAAGATTTTGAAGATTTTCTCGAAGTCTATTTAGCAGATTTATTCTAAGCAGATAATTTGGCTCATCAGAGTGAGAAAACTGCTGTTAATGCTGGTCAAGCTTCCTTTTCTGAATCAATTCCGCTTAGACTTCCTTATATAGAAAAGTGTGGTTTGCAATTGAAGGAAATTGGCCCTCTTGGCTGCAAT

mRNA sequence

TTTCGAAGCCAGTGGGCGCCCCTGATGGAAGGAAATCCCTAGACGGAATGCCAGGGGTCTGGAAACCGCATCGACTTCAGCACGCCTATTGGGCTTTCTACGGCTGCCTCTTCGTGATCAAGTCTCGTGCTTTCACTTTGACAGCAAGTGACTTGGAGGAGTGGTATCAAAACCCCGAGTCTTTCCATCATGAGCAGGATATGGTTTTGTGGACGGAGAAACTACGACCATGTGCTGAAGCTTTATATATTGTATTGTTTGAAAACCATAGTCAGCTGCTCGGCCCTGTTGTGGTTTCTATCCTTCAAGAGGCAATGAATGGTTGCTCTAGTTTAGTGACTGAAATATCTCCAGGATTGCTTCTCAAAGATGCTGCTTATGGTGCTGCTGCATATGTTTATTATGAGCTTTCTAATTACCTGAGCTTCAAAGACTGGTTTAATGGTGCTTTATCCCTTGAGATCTCCAATGATCATCCAAACATGCGTATTATCCGTCGGAAAGTTGCACTAATATTGGGACAATGGGTTTCTGAGAGTGAGAAAACTGCTGTTAATGCTGGTCAAGCTTCCTTTTCTGAATCAATTCCGCTTAGACTTCCTTATATAGAAAAGTGTGGTTTGCAATTGAAGGAAATTGGCCCTCTTGGCTGCAAT

Coding sequence (CDS)

ATGCCAGGGGTCTGGAAACCGCATCGACTTCAGCACGCCTATTGGGCTTTCTACGGCTGCCTCTTCGTGATCAAGTCTCGTGCTTTCACTTTGACAGCAAGTGACTTGGAGGAGTGGTATCAAAACCCCGAGTCTTTCCATCATGAGCAGGATATGGTTTTGTGGACGGAGAAACTACGACCATGTGCTGAAGCTTTATATATTGTATTGTTTGAAAACCATAGTCAGCTGCTCGGCCCTGTTGTGGTTTCTATCCTTCAAGAGGCAATGAATGGTTGCTCTAGTTTAGTGACTGAAATATCTCCAGGATTGCTTCTCAAAGATGCTGCTTATGGTGCTGCTGCATATGTTTATTATGAGCTTTCTAATTACCTGAGCTTCAAAGACTGGTTTAATGGTGCTTTATCCCTTGAGATCTCCAATGATCATCCAAACATGCGTATTATCCGTCGGAAAGTTGCACTAATATTGGGACAATGGGTTTCTGAGAGTGAGAAAACTGCTGTTAATGCTGGTCAAGCTTCCTTTTCTGAATCAATTCCGCTTAGACTTCCTTATATAGAAAAGTGTGGTTTGCAATTGAAGGAAATTGGCCCTCTTGGCTGCAAT

Protein sequence

MPGVWKPHRLQHAYWAFYGCLFVIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVVVSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISNDHPNMRIIRRKVALILGQWVSESEKTAVNAGQASFSESIPLRLPYIEKCGLQLKEIGPLGCN

Homology

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BLAST of ClCG05G011300 vs. Swiss-Prot
Match: IPO11_HUMAN (Importin-11 OS=Homo sapiens GN=IPO11 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-17
Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 1


Query: 2   PGVWKPHRLQHAYWAFYGCLFVIK---SRAFTLTASDLEEWYQNPESFHHEQDMV-LWTE 61
           P   + H+++ A++ +     + +   S  F LT  +L  W ++PE F  E+     W  
Sbjct: 344 PETLEAHKIKMAFFTYPTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKY 403

Query: 62  KLRPCAEALYIVLFENHSQLLGPVVVSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYV 121
            LRPC E L+I +F  ++Q L PV++ ++Q  + G +++  E    LL+KDA Y A    
Sbjct: 404 SLRPCTEVLFIDIFHEYNQTLTPVLLEMMQ-TLQGPTNV--EDMNALLIKDAVYNAVGLA 463

Query: 122 YYELSNYLSFKDWFNGALSLEISNDHPNMRIIRRKVALILGQWVSESEKT 168
            YEL + + F  WF   L  E+   H   + +RR+V  ++GQW+S   K+
Sbjct: 464 AYELFDSVDFDQWFKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKS 510

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BLAST of ClCG05G011300 vs. Swiss-Prot
Match: IPO11_MOUSE (Importin-11 OS=Mus musculus GN=Ipo11 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 8.6e-17
Identity = 52/170 (30.59%), Postives = 87/170 (51.18%), Query Frame = 1


Query: 2   PGVWKPHRLQHAYWAFYGCLFVIK---SRAFTLTASDLEEWYQNPESFHHEQDMV-LWTE 61
           P   + H+++ A++ +     + +   S  F LT  +L  W ++PE F  E+     W  
Sbjct: 344 PETLEAHKIKMAFFTYPTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKY 403

Query: 62  KLRPCAEALYIVLFENHSQLLGPVVVSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYV 121
            LRPC E L+I +F  ++Q L PV++ ++Q  + G +++  E    LL+KDA Y A    
Sbjct: 404 SLRPCTEVLFIDIFHEYNQTLTPVLLEMMQ-TLEGPTNV--EDMNALLIKDAVYNAVGLA 463

Query: 122 YYELSNYLSFKDWFNGALSLEISNDHPNMRIIRRKVALILGQWVSESEKT 168
            +EL + + F  WF   L  E+   H   + +RR+V  ++GQW+S   K+
Sbjct: 464 AFELFDSVDFDQWFKTQLLPELQVSHNRYKPLRRRVIWLIGQWISVKFKS 510

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BLAST of ClCG05G011300 vs. TrEMBL
Match: A0A067ENS5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001804mg PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.7e-67
Identity = 126/141 (89.36%), Postives = 133/141 (94.33%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           V+  R F LTASDLEEWYQNPE+FHHEQDMV WTEKLRPCAEALYIVLFENHSQLLGPVV
Sbjct: 401 VLIRRYFVLTASDLEEWYQNPEAFHHEQDMVQWTEKLRPCAEALYIVLFENHSQLLGPVV 460

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSILQEAMNGCS+ VTEI+PGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSL++SND
Sbjct: 461 VSILQEAMNGCSTSVTEITPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLDLSND 520

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPNM II RKVA+ILGQWVSE
Sbjct: 521 HPNMHIIHRKVAIILGQWVSE 541

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BLAST of ClCG05G011300 vs. TrEMBL
Match: V4SZN4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010971mg PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.7e-67
Identity = 126/141 (89.36%), Postives = 133/141 (94.33%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           V+  R F LTASDLEEWYQNPE+FHHEQDMV WTEKLRPCAEALYIVLFENHSQLLGPVV
Sbjct: 401 VLIRRYFVLTASDLEEWYQNPEAFHHEQDMVQWTEKLRPCAEALYIVLFENHSQLLGPVV 460

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSILQEAMNGCS+ VTEI+PGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSL++SND
Sbjct: 461 VSILQEAMNGCSTSVTEITPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLDLSND 520

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPNM II RKVA+ILGQWVSE
Sbjct: 521 HPNMHIIHRKVAIILGQWVSE 541

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BLAST of ClCG05G011300 vs. TrEMBL
Match: A0A067JS85_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00452 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.8e-66
Identity = 127/141 (90.07%), Postives = 131/141 (92.91%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           V+  R F LTASDLEEWYQNPESFHHEQD+V WTEKLRPCAEALYIVLFENHSQLLGPVV
Sbjct: 401 VLIRRYFVLTASDLEEWYQNPESFHHEQDVVQWTEKLRPCAEALYIVLFENHSQLLGPVV 460

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           V ILQEAMNGC S VTEI+PGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLE+SND
Sbjct: 461 VCILQEAMNGCPSSVTEITPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLELSND 520

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           H NMRII RKVALILGQWVSE
Sbjct: 521 HANMRIIHRKVALILGQWVSE 541

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BLAST of ClCG05G011300 vs. TrEMBL
Match: M5Y4M1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023343m1g PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-65
Identity = 123/141 (87.23%), Postives = 132/141 (93.62%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           ++  R F L+ +DLEEWYQ+PESFHHEQDMV WTEKLRPCAEALYIVLFENHSQLLGPVV
Sbjct: 272 ILIRRYFVLSTNDLEEWYQSPESFHHEQDMVQWTEKLRPCAEALYIVLFENHSQLLGPVV 331

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSIL+EAMNGC + VTEI+PGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLE+SND
Sbjct: 332 VSILKEAMNGCPTSVTEITPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLELSND 391

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPNMRII RKVALILGQWVSE
Sbjct: 392 HPNMRIIHRKVALILGQWVSE 412

[Close]

BLAST of ClCG05G011300 vs. TrEMBL
Match: A0A0D2MGA6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G262500 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.9e-65
Identity = 122/141 (86.52%), Postives = 129/141 (91.49%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           V+  R F LT SDLEEWY+NPE FHHEQDMV WTEKLRPCAEALYIVLFENHSQLL P+V
Sbjct: 338 VLIRRYFVLTTSDLEEWYENPEVFHHEQDMVQWTEKLRPCAEALYIVLFENHSQLLAPIV 397

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSILQEAMNGC +  TEI+PGLLLKDAAYGAAAYVYYELSNYLSF+DWFNGALSLE+SND
Sbjct: 398 VSILQEAMNGCPTSTTEITPGLLLKDAAYGAAAYVYYELSNYLSFRDWFNGALSLELSND 457

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPNMRII RKVALILGQWVSE
Sbjct: 458 HPNMRIIHRKVALILGQWVSE 478

[Close]

BLAST of ClCG05G011300 vs. TAIR10
Match: AT3G08960.1 (AT3G08960.1 ARM repeat superfamily protein)

HSP 1 Score: 245.4 bits (625), Expect = 3.1e-65
Identity = 116/141 (82.27%), Postives = 124/141 (87.94%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           V+  R F LTASDLEEWYQNPESFHHEQDM+ WTEKLRPCAEALY+VLFEN+SQLLGP+V
Sbjct: 401 VLVRRYFVLTASDLEEWYQNPESFHHEQDMIQWTEKLRPCAEALYMVLFENYSQLLGPIV 460

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSILQEAMN C   VTEI+P LLLKDAAY A AYVYYELSNYL+F+DWFNGALSLE+SND
Sbjct: 461 VSILQEAMNNCPPSVTEITPALLLKDAAYAATAYVYYELSNYLNFRDWFNGALSLELSND 520

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPN RII RKVA+ILG WVSE
Sbjct: 521 HPNRRIIHRKVAMILGHWVSE 541

[Close]

BLAST of ClCG05G011300 vs. NCBI nr
Match: gi|778680809|ref|XP_011651399.1| (PREDICTED: importin-11 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 4.7e-71
Identity = 135/141 (95.74%), Postives = 137/141 (97.16%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           V+  R F LTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV
Sbjct: 404 VLIRRYFVLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 463

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYL+FKDWFNGALSLEISND
Sbjct: 464 VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLTFKDWFNGALSLEISND 523

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPNMRIIRRKVALILGQWVSE
Sbjct: 524 HPNMRIIRRKVALILGQWVSE 544

[Close]

BLAST of ClCG05G011300 vs. NCBI nr
Match: gi|659114414|ref|XP_008457041.1| (PREDICTED: importin-11 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 1.8e-70
Identity = 134/141 (95.04%), Postives = 137/141 (97.16%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           V+  R F LTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV
Sbjct: 404 VLIRRYFVLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 463

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSILQEAM+GCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYL+FKDWFNGALSLEISND
Sbjct: 464 VSILQEAMSGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLTFKDWFNGALSLEISND 523

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPNMRIIRRKVALILGQWVSE
Sbjct: 524 HPNMRIIRRKVALILGQWVSE 544

[Close]

BLAST of ClCG05G011300 vs. NCBI nr
Match: gi|470121067|ref|XP_004296605.1| (PREDICTED: importin-11 [Fragaria vesca subsp. vesca])

HSP 1 Score: 263.5 bits (672), Expect = 3.1e-67
Identity = 127/141 (90.07%), Postives = 132/141 (93.62%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           ++  R F LT SDLEEWYQNPESFHHEQDMV WTEKLRPCAEALYIVLFENHSQLLGPVV
Sbjct: 401 ILIRRYFVLTPSDLEEWYQNPESFHHEQDMVQWTEKLRPCAEALYIVLFENHSQLLGPVV 460

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSILQEAMNGC + VTEI+PGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLE+SND
Sbjct: 461 VSILQEAMNGCPTSVTEITPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLELSND 520

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPNMRII RKVALILGQWVSE
Sbjct: 521 HPNMRIIHRKVALILGQWVSE 541

[Close]

BLAST of ClCG05G011300 vs. NCBI nr
Match: gi|985453083|ref|XP_015386769.1| (PREDICTED: importin-11 isoform X2 [Citrus sinensis])

HSP 1 Score: 262.7 bits (670), Expect = 5.3e-67
Identity = 126/141 (89.36%), Postives = 133/141 (94.33%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           V+  R F LTASDLEEWYQNPE+FHHEQDMV WTEKLRPCAEALYIVLFENHSQLLGPVV
Sbjct: 401 VLIRRYFVLTASDLEEWYQNPEAFHHEQDMVQWTEKLRPCAEALYIVLFENHSQLLGPVV 460

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSILQEAMNGCS+ VTEI+PGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSL++SND
Sbjct: 461 VSILQEAMNGCSTSVTEITPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLDLSND 520

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPNM II RKVA+ILGQWVSE
Sbjct: 521 HPNMHIIHRKVAIILGQWVSE 541

[Close]

BLAST of ClCG05G011300 vs. NCBI nr
Match: gi|641837763|gb|KDO56713.1| (hypothetical protein CISIN_1g001804mg [Citrus sinensis])

HSP 1 Score: 262.7 bits (670), Expect = 5.3e-67
Identity = 126/141 (89.36%), Postives = 133/141 (94.33%), Query Frame = 1


Query: 23  VIKSRAFTLTASDLEEWYQNPESFHHEQDMVLWTEKLRPCAEALYIVLFENHSQLLGPVV 82
           V+  R F LTASDLEEWYQNPE+FHHEQDMV WTEKLRPCAEALYIVLFENHSQLLGPVV
Sbjct: 401 VLIRRYFVLTASDLEEWYQNPEAFHHEQDMVQWTEKLRPCAEALYIVLFENHSQLLGPVV 460

Query: 83  VSILQEAMNGCSSLVTEISPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLEISND 142
           VSILQEAMNGCS+ VTEI+PGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSL++SND
Sbjct: 461 VSILQEAMNGCSTSVTEITPGLLLKDAAYGAAAYVYYELSNYLSFKDWFNGALSLDLSND 520

Query: 143 HPNMRIIRRKVALILGQWVSE 164
           HPNM II RKVA+ILGQWVSE
Sbjct: 521 HPNMHIIHRKVAIILGQWVSE 541

The following BLAST results are available for this feature:

BLAST of ClCG05G011300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IPO11_HUMAN	3.9e-17	31.18	Importin-11 OS=Homo sapiens GN=IPO11 PE=1 SV=1	[more]
IPO11_MOUSE	8.6e-17	30.59	Importin-11 OS=Mus musculus GN=Ipo11 PE=1 SV=1	[more]

BLAST of ClCG05G011300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067ENS5_CITSI	3.7e-67	89.36	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001804mg PE=4 SV=1	[more]
V4SZN4_9ROSI	3.7e-67	89.36	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010971mg PE=4 SV=1	[more]
A0A067JS85_JATCU	1.8e-66	90.07	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00452 PE=4 SV=1	[more]
M5Y4M1_PRUPE	1.2e-65	87.23	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023343m1g PE=4 ...	[more]
A0A0D2MGA6_GOSRA	5.9e-65	86.52	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G262500 PE=4 SV=1	[more]

BLAST of ClCG05G011300 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G08960.1	3.1e-65	82.27	ARM repeat superfamily protein	[more]

BLAST of ClCG05G011300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680809\|ref\|XP_011651399.1\|	4.7e-71	95.74	PREDICTED: importin-11 [Cucumis sativus]	[more]
gi\|659114414\|ref\|XP_008457041.1\|	1.8e-70	95.04	PREDICTED: importin-11 [Cucumis melo]	[more]
gi\|470121067\|ref\|XP_004296605.1\|	3.1e-67	90.07	PREDICTED: importin-11 [Fragaria vesca subsp. vesca]	[more]
gi\|985453083\|ref\|XP_015386769.1\|	5.3e-67	89.36	PREDICTED: importin-11 isoform X2 [Citrus sinensis]	[more]
gi\|641837763\|gb\|KDO56713.1\|	5.3e-67	89.36	hypothetical protein CISIN_1g001804mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008536	Ran GTPase binding
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G011300.1	ClCG05G011300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 29..161 score: 1.2
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 26..163 score: 1.2
None	No IPR available	PANTHER	PTHR10997	IMPORTIN-7, 8, 11	coord: 26..163 score: 2.0
None	No IPR available	PANTHER	PTHR10997:SF7	IMPORTIN-11	coord: 26..163 score: 2.0
None	No IPR available	PROFILE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..20 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G011300	Csa3G313230	Cucumber (Chinese Long) v2	cuwcgB233
ClCG05G011300	Cla013198	Watermelon (97103) v1	wcgwmB286
ClCG05G011300	CSPI03G21430	Wild cucumber (PI 183967)	cpiwcgB240
ClCG05G011300	Carg07454	Silver-seed gourd	carwcgB0739

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G011300	Cucurbita pepo (Zucchini)	cpewcgB518
ClCG05G011300	Cucurbita pepo (Zucchini)	cpewcgB560
ClCG05G011300	Bottle gourd (USVL1VR-Ls)	lsiwcgB332
ClCG05G011300	Cucumber (Gy14) v2	cgybwcgB217
ClCG05G011300	Melon (DHL92) v3.6.1	medwcgB417
ClCG05G011300	Silver-seed gourd	carwcgB0497
ClCG05G011300	Cucumber (Chinese Long) v3	cucwcgB241
ClCG05G011300	Watermelon (97103) v2	wcgwmbB229
ClCG05G011300	Wax gourd	wcgwgoB441
ClCG05G011300	Cucumber (Gy14) v1	cgywcgB640
ClCG05G011300	Cucurbita maxima (Rimu)	cmawcgB234
ClCG05G011300	Cucurbita maxima (Rimu)	cmawcgB407
ClCG05G011300	Cucurbita moschata (Rifu)	cmowcgB220
ClCG05G011300	Cucurbita moschata (Rifu)	cmowcgB406
ClCG05G011300	Melon (DHL92) v3.5.1	mewcgB427