ClCG05G000670 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTATTGATTTGATTTATTGAGAGAAATGGGGTCGAGAAAAGAGAAAAAATATATAGAGAGATATGGGAAATCGCAGCAATTATATCATCATTTCATTGGGATCATGATGACGCCTTTTTAAAGCGAATGCTGAAGAAAAAGAAAGACCCAAAAGAGAAATTTGAGTGGATGGGTTTGTTGAGCTGATTCTCGCACCACCCAACCATTGATCGCCACACCACAACCCACCCATTTGTCTTCTTTCGCTTTGTTTTTCCTTTTTCCGTCTTTTCTAAAAGAAAAAACCATAATTTCAGTTGGTCGTCGTCTCAGTGAGTCAGTGACTGTTGTGGGGTAGTAGAGATTTGTTCCAATTGACGACACTGGCGGTTGGATGAAGAAGTAGACCCAGAAAACAGAGGGAGCAGGCGAAGCGAGCAAATGGGTTTGATCAGTAATCGAGTGGAGAGAAGTGAAATCAAACCAGGCGACCACATTTACACTTACAGGGCTGTTTTCGCTTACTCCCATCATGGTACTTCTCTTTATATTTCTCTCTCCCCCCTTCGGGATTTTGAAATTATTTGTGAGGAAAACGATCTGAATTTCGCTTATTTGCTCATTTCTGTTTCTGGGATTCCTTTAGCATTTTGCTCTTGGATTTGAGTTTTCCCTTGTGATTGATAATGGATTTCTGGGAATAGATCGTATTATGTGTTGTTCATAGTTCAGCATTTTTGTTCCAGCTACTATGTTGCTGATGTGATGTTGACTGAGTTTGGTTTCACTGTAAGTGCATTTTCTGTTTGTACTTGAAGTCCCCTATAAGTTGTGTGTTTCATCAGAACGCTTTATAGGGATCCCATTTCAAGATTTGTTTCATCAGATTGCCTTCTCTGTTCTTGCAAATTTCAGCGTATTCATAGTTTCTCCATTCTGAGTCATTAGATCAGAAATTGATTGTTTAAATCAATTGAACTAGAATAGGGACCATAGAATTCCACATCTAATGTGCTTTGAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGAGAGAGAGAGAGAGAGAGGTCTCTGTTATTCAATTAATGATCGTAAATGATTTAGCTCCGAAGCAGGAATCGTGTATTACAGTTTCAGCTTTCTCCTAATCTTTGTTAATTGATGTGCCACAAGCACATTAGCGTATTTGAACAGTCTCGTGTGATTTTCATTTATTCCTTTGTAACCTAGAATTCTTTTAGATCACTCTAATTAGATGTTGACAGAAATTTTGAAAGGATACTTTGGTTAGACTTTTCTTCTTAAATTACATGGTTTGTCTCTTTTCCAGTGGTTGATTATTAATTAGTTAGTCTTTCATTTCATATCTGCCAACTATATTGTATGGCCCATGTCCATGTAGGTTAAGTTTATAATCTTTTAGCAAATGGTTGTTGCCTGGTAGCTTTTAAACTGTTCTTGAATCTTCAGAATCTGATAAAATATAAATATTTGTGCTCAAGTTATGCTATTCTGAACTAGTTTAGAACTCTCCTTTATTTTGTTCACTCTGAGTTGTGGTCCGGGACTCTGGATTATACAATGTCTATATGAATAGAATTTTGAATTTTGAATTTTAACTCGTTAAAATGAATTTTTAAAACTGCAATACACCTGTTGAAACGATTACCTCTTCTGAAGTTACTTTTCAAAATTCATTGAACTCTTTACCACATATATTATGAATTTGAAATTCCATTTGAAGCAATCTGTTTCAAAATGTTCTTTTTCCATATTGACGGTTTTGAGAAGTCCAATTATTTGACTTGTGTGCAACCCCATTTATATTTTTACTTACAATTCTATTGACTAAACATTACTAGACAGGAACTTACTTCCCAAATTGACACTACGTTCTAAAATATGCACTGCCATAAAGTTTTCATTTTCTATCCTTTTCCACTGCGTTCTCCATGCAGGCATCTTTGTAGGGGGAAGCAAGGTTGTGCATTTTAGACCTCAGAGAAACTTGAATTCAAGCACTGACACTCCTGATTTCTATGATTCAAGTTCAAGCAATCCATCATCCTGTCCAATTTTCCCTGACTGTGGATTTAGACAGCCAAACAGTGGGGTAGTCCTTTCTTGTCTGGACTGCTTTCTGAGAAATGGATCCCTTTACTGCTTTGACTATGGAGTTCCCCCATCAGTTTTTCTTTCCAGGGTAAGGGGTGGCACTTGCACCACTGCAACATCTGACTCATTCGATATGGTTATTCACCGAGCAATGTATCTTCTTCAAAATGGATTTGGAAACTACAATGTGTTTCAAAACAACTGTGAGGATTTTGCTCTATACTGCAAAACAGGTCTTCTGATAGTGGACAGGCTTGGGGTTGGAAGAAGTGGTCAAGCTTCTTCTGTCATAGGTGCTCCCTTGGCTGCCATTCTTTCCTCTCCTCTGAAGTTGCTAATGCCAAGTCCTGTAGGCATGGCTGTGATGACTGCTGGAATGTACAGCATGAGTAGATACGCGACTGACATTGGTGTTCGAACTGATGTGATTAAGGTGGCAGTGGAGGACTTGCCTCTTAATCTCGAGTCTTTCAGCAGCGAAGAAGATGAAGATGATGATGAAGCAGAAGAAGAAGAAGAAGCACCCACCACCAAGAAAAATGAAGATTCAAAAATGCTTGTGGCCATGTGATTTCAACTCCATTTTCTGGTTGATGGAGCTGCTTCATAAAAATTAATTGATTCTATGCCAGGTATATAAAATAGCGACATTGCAGTTCAATCCTCGACTCCAAATTGCTCATCTTCTTTCCTTGTTATAGGTATGTCATGTGGTTGCACACTGTTGTTTTAACCTGTATGAAATTGGTGTATGGACTAGCCTGATCATTATTAATATTTTGTGGTTAGTCAGCTACATCACTGTCAAAGTCCATTTTAATGGATGCACAGATCCACAACCAACATATCTGTCTCCCATTAGATTTGGATGGTTTGTTTTTTGTTATTTTGATAAAATGTCTGATCCATGTGATTCTATCTTACCACCAGAAATAAAAAGCTAGACTAATG GTATTGATTTGATTTATTGAGAGAAATGGGGTCGAGAAAAGAGAAAAAATATATAGAGAGATATGGGAAATCGCAGCAATTATATCATCATTTCATTGGGATCATGATGACGCCTTTTTAAAGCGAATGCTGAAGAAAAAGAAAGACCCAAAAGAGAAATTTGAGTGGATGGGTTTGTTGAGCTGATTCTCGCACCACCCAACCATTGATCGCCACACCACAACCCACCCATTTGTCTTCTTTCGCTTTGTTTTTCCTTTTTCCGTCTTTTCTAAAAGAAAAAACCATAATTTCAGTTGGTCGTCGTCTCAGTGAGTCAGTGACTGTTGTGGGGTAGTAGAGATTTGTTCCAATTGACGACACTGGCGGTTGGATGAAGAAGTAGACCCAGAAAACAGAGGGAGCAGGCGAAGCGAGCAAATGGGTTTGATCAGTAATCGAGTGGAGAGAAGTGAAATCAAACCAGGCGACCACATTTACACTTACAGGGCTGTTTTCGCTTACTCCCATCATGGCATCTTTGTAGGGGGAAGCAAGGTTGTGCATTTTAGACCTCAGAGAAACTTGAATTCAAGCACTGACACTCCTGATTTCTATGATTCAAGTTCAAGCAATCCATCATCCTGTCCAATTTTCCCTGACTGTGGATTTAGACAGCCAAACAGTGGGGTAGTCCTTTCTTGTCTGGACTGCTTTCTGAGAAATGGATCCCTTTACTGCTTTGACTATGGAGTTCCCCCATCAGTTTTTCTTTCCAGGGTAAGGGGTGGCACTTGCACCACTGCAACATCTGACTCATTCGATATGGTTATTCACCGAGCAATGTATCTTCTTCAAAATGGATTTGGAAACTACAATGTGTTTCAAAACAACTGTGAGGATTTTGCTCTATACTGCAAAACAGGTCTTCTGATAGTGGACAGGCTTGGGGTTGGAAGAAGTGGTCAAGCTTCTTCTGTCATAGGTGCTCCCTTGGCTGCCATTCTTTCCTCTCCTCTGAAGTTGCTAATGCCAAGTCCTGTAGGCATGGCTGTGATGACTGCTGGAATGTACAGCATGAGTAGATACGCGACTGACATTGGTGTTCGAACTGATGTGATTAAGGTGGCAGTGGAGGACTTGCCTCTTAATCTCGAGTCTTTCAGCAGCGAAGAAGATGAAGATGATGATGAAGCAGAAGAAGAAGAAGAAGCACCCACCACCAAGAAAAATGAAGATTCAAAAATGCTTGTGGCCATGTGATTTCAACTCCATTTTCTGGTTGATGGAGCTGCTTCATAAAAATTAATTGATTCTATGCCAGGTATATAAAATAGCGACATTGCAGTTCAATCCTCGACTCCAAATTGCTCATCTTCTTTCCTTGTTATAGGTATGTCATGTGGTTGCACACTGTTGTTTTAACCTGTATGAAATTGGTGTATGGACTAGCCTGATCATTATTAATATTTTGTGGTTAGTCAGCTACATCACTGTCAAAGTCCATTTTAATGGATGCACAGATCCACAACCAACATATCTGTCTCCCATTAGATTTGGATGGTTTGTTTTTTGTTATTTTGATAAAATGTCTGATCCATGTGATTCTATCTTACCACCAGAAATAAAAAGCTAGACTAATG ATGGGTTTGATCAGTAATCGAGTGGAGAGAAGTGAAATCAAACCAGGCGACCACATTTACACTTACAGGGCTGTTTTCGCTTACTCCCATCATGGCATCTTTGTAGGGGGAAGCAAGGTTGTGCATTTTAGACCTCAGAGAAACTTGAATTCAAGCACTGACACTCCTGATTTCTATGATTCAAGTTCAAGCAATCCATCATCCTGTCCAATTTTCCCTGACTGTGGATTTAGACAGCCAAACAGTGGGGTAGTCCTTTCTTGTCTGGACTGCTTTCTGAGAAATGGATCCCTTTACTGCTTTGACTATGGAGTTCCCCCATCAGTTTTTCTTTCCAGGGTAAGGGGTGGCACTTGCACCACTGCAACATCTGACTCATTCGATATGGTTATTCACCGAGCAATGTATCTTCTTCAAAATGGATTTGGAAACTACAATGTGTTTCAAAACAACTGTGAGGATTTTGCTCTATACTGCAAAACAGGTCTTCTGATAGTGGACAGGCTTGGGGTTGGAAGAAGTGGTCAAGCTTCTTCTGTCATAGGTGCTCCCTTGGCTGCCATTCTTTCCTCTCCTCTGAAGTTGCTAATGCCAAGTCCTGTAGGCATGGCTGTGATGACTGCTGGAATGTACAGCATGAGTAGATACGCGACTGACATTGGTGTTCGAACTGATGTGATTAAGGTGGCAGTGGAGGACTTGCCTCTTAATCTCGAGTCTTTCAGCAGCGAAGAAGATGAAGATGATGATGAAGCAGAAGAAGAAGAAGAAGCACCCACCACCAAGAAAAATGAAGATTCAAAAATGCTTGTGGCCATGTGA MGLISNRVERSEIKPGDHIYTYRAVFAYSHHGIFVGGSKVVHFRPQRNLNSSTDTPDFYDSSSSNPSSCPIFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFDYGVPPSVFLSRVRGGTCTTATSDSFDMVIHRAMYLLQNGFGNYNVFQNNCEDFALYCKTGLLIVDRLGVGRSGQASSVIGAPLAAILSSPLKLLMPSPVGMAVMTAGMYSMSRYATDIGVRTDVIKVAVEDLPLNLESFSSEEDEDDDEAEEEEEAPTTKKNEDSKMLVAM
BLAST of ClCG05G000670 vs. TrEMBL
Match: A0A0A0L737_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119400 PE=4 SV=1) HSP 1 Score: 524.6 bits (1350), Expect = 7.1e-146 Identity = 261/284 (91.90%), Postives = 267/284 (94.01%), Query Frame = 1
BLAST of ClCG05G000670 vs. TrEMBL
Match: A0A067JWV7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14227 PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 4.2e-114 Identity = 200/250 (80.00%), Postives = 225/250 (90.00%), Query Frame = 1
BLAST of ClCG05G000670 vs. TrEMBL
Match: A0A0D3DZD1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 3.0e-112 Identity = 195/263 (74.14%), Postives = 230/263 (87.45%), Query Frame = 1
BLAST of ClCG05G000670 vs. TrEMBL
Match: A0A078HMD9_BRANA (BnaCnng08590D protein OS=Brassica napus GN=BnaCnng08590D PE=4 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 5.1e-112 Identity = 195/260 (75.00%), Postives = 228/260 (87.69%), Query Frame = 1
BLAST of ClCG05G000670 vs. TrEMBL
Match: M4EUZ4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 5.1e-112 Identity = 193/259 (74.52%), Postives = 229/259 (88.42%), Query Frame = 1
BLAST of ClCG05G000670 vs. TAIR10
Match: AT1G01225.1 (AT1G01225.1 NC domain-containing protein-related) HSP 1 Score: 406.4 bits (1043), Expect = 1.4e-113 Identity = 193/257 (75.10%), Postives = 229/257 (89.11%), Query Frame = 1
BLAST of ClCG05G000670 vs. TAIR10
Match: AT4G00905.1 (AT4G00905.1 NC domain-containing protein-related) HSP 1 Score: 368.2 bits (944), Expect = 4.3e-102 Identity = 181/245 (73.88%), Postives = 204/245 (83.27%), Query Frame = 1
BLAST of ClCG05G000670 vs. TAIR10
Match: AT5G06370.1 (AT5G06370.1 NC domain-containing protein-related) HSP 1 Score: 249.2 bits (635), Expect = 2.9e-66 Identity = 126/243 (51.85%), Postives = 165/243 (67.90%), Query Frame = 1
BLAST of ClCG05G000670 vs. TAIR10
Match: AT3G02700.1 (AT3G02700.1 NC domain-containing protein-related) HSP 1 Score: 240.7 bits (613), Expect = 1.0e-63 Identity = 129/255 (50.59%), Postives = 167/255 (65.49%), Query Frame = 1
BLAST of ClCG05G000670 vs. TAIR10
Match: AT5G16360.1 (AT5G16360.1 NC domain-containing protein-related) HSP 1 Score: 194.1 bits (492), Expect = 1.1e-49 Identity = 114/270 (42.22%), Postives = 149/270 (55.19%), Query Frame = 1
BLAST of ClCG05G000670 vs. NCBI nr
Match: gi|659074915|ref|XP_008437864.1| (PREDICTED: uncharacterized protein LOC103483167 [Cucumis melo]) HSP 1 Score: 536.2 bits (1380), Expect = 3.4e-149 Identity = 262/271 (96.68%), Postives = 268/271 (98.89%), Query Frame = 1
BLAST of ClCG05G000670 vs. NCBI nr
Match: gi|778676825|ref|XP_004133802.2| (PREDICTED: FACT complex subunit POB3-like [Cucumis sativus]) HSP 1 Score: 524.6 bits (1350), Expect = 1.0e-145 Identity = 261/284 (91.90%), Postives = 267/284 (94.01%), Query Frame = 1
BLAST of ClCG05G000670 vs. NCBI nr
Match: gi|1009142390|ref|XP_015888698.1| (PREDICTED: uncharacterized protein LOC107423628 [Ziziphus jujuba]) HSP 1 Score: 431.0 bits (1107), Expect = 1.5e-117 Identity = 212/259 (81.85%), Postives = 233/259 (89.96%), Query Frame = 1
BLAST of ClCG05G000670 vs. NCBI nr
Match: gi|255564619|ref|XP_002523304.1| (PREDICTED: uncharacterized protein LOC8263480 [Ricinus communis]) HSP 1 Score: 423.7 bits (1088), Expect = 2.4e-115 Identity = 212/273 (77.66%), Postives = 235/273 (86.08%), Query Frame = 1
BLAST of ClCG05G000670 vs. NCBI nr
Match: gi|703114621|ref|XP_010100705.1| (hypothetical protein L484_023474 [Morus notabilis]) HSP 1 Score: 419.5 bits (1077), Expect = 4.6e-114 Identity = 207/262 (79.01%), Postives = 230/262 (87.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |