ClCG04G012440 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG04G012440
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Unknown protein
Location	CG_Chr04 : 27292247 .. 27296016 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGTGATTTTTGCTTTCTGCTTGTTGGTTATCGCCGGTCAATCTCTCTAGGTGTGAAGGAAGAGGGAGAGAGGGAGCCTGGCAAAGGGGTTTCCTCTGGATTTCTAGTTCGAAGGGAAGCAATCAAGGTTCATAGCAATGGCTGGGAAAGAAGTTCGCGAATACACCAATCTCTCCGACCCAAAAGGTACCCACATTAAATTATTATATCGAAGCTTTGATCCTTGTTCTTATTTTTGTTTTTCTGAGCCGCCATTCTCATTGCTGTTTGCAATTGCAGACAAGAAGTGGGGTAAAGGGAAGGATAAGATAGACGATGAAGATATTACGTTTCAACGGATGGTTGCGAAGGTTAGCGCAATTTTGCCTCAACCACCCTCATTCGCGCTCTTTCTTGAACAATAAGTTTCCTTCTTATTTAGGTTCTCTATCTTTCTTTGCTCATCCTATAATCATTATCAGTTTATTGAGTTAAGATTTCTCCGAATTGGACTGAGCATTCTCAAGGTATAATTGGAGAGTTTCCTCAGAGTTTGTTCTCTTAAGCCTCTTATTAGTTGTAATTGGACATTGCATTCTCAAGGTATAATTGGAAAGTTTCCTAAGAGTTTGTTCTCTTAAGCCTCTTATTAGTTGTAATTGGACATTGCATCGAATACATAGAAAATGGAGGAAAAATTGACTATCAGCTTGATGATTTTTATTACTGTAGGCGTCATTCTCATTCTTCTATACAATCATAATCGATCGAAAGAAGACGCAGCACAAATGAATCCCTCTTTTCTTCGTAAAACTGAAACTTGTTAGTGTAGTCTCCGTTTGGAAATAATTTTGTTTTTTTGACAATTTTCTATCATTTTCATTTTCTTAATGGTTGGCACCTTTCTTTAAGTAAAATTTTTAGCCAAATTCCAAATTCCAAAAACATTTTATTAAAAACTAATTATTTTTAGTTTCTAGAATCTGGTTTGGTGTTTGAAAACATTGGTAAAAATTATATAATAAATCAAGAAATTTAGAAGTAGAATGATTATTTATAGGTTTAATTTTCAAAAACAAAAAACAAAAAATCAAATAATCAAATAATTACCAATGGCAGTAATTTACTTGTGATTTGTGAAACGTGTTTTGAATCAATGTCACCCTTCTTTCTTCTTTTAAAGCTTGGCATTCAAATACTGGTAGATGTGATACAGGGTAGGACTATAAGTTATAAATGTTATATCACTCTCTACTTTCAAGTTTTCAAATTAGGTCTTCAAGAAAAACTCGAAAAGGTGTTAGATGTTGTCTTGGAGCTAGCATTGGGTGGGCTACCCGCTAAGCCTCTCCGATGATTAGTGGGGTGGACCATGAACATAGAAGTAAGGCTCCAACACTCTAGTTGTAAAAGGGGGAAGAAAAGAATAGAACCACACCATATTTGTAGTGTAGCAATAATATGATCAATTTGAACTGAGAGGGTTCTATAATCTAGACTTATGATAAGACCAACCTATGGAATGGTAAGTGACTACATACTGCTTATTCTTTCCCTTGTAATTCGCTGATTTAAGAATTTGTTACTTAAATTTTGTTGCCACATTCTGTTTATCATAGTCTACTTCTTGACTTTCTTAGACAGATACAGATTTGGATAGGCAGATAGGTATCTTGGATAGAGCTTTCATGCTTCTCTGAGTAGCCAGGATTTCTTAAAGCTGGAATATTTTACGGCTAAAATTCTCGTAAATAGAACATTTAACACTTAACAGTTGACATTGTGTGGTAGAGTCACCTTGTCATTTGATGAAGCTTTAAATTTCCATGTGCTTGAGTGAACACGTTTATCCTTCTGTACTAATTACATCTTGCAAAGATGGTCAAATCCCAAATCTATTTTCCTATAAGTATGAACAGAAGGATCATACTGGTTATCTCAAGCGCGGCCTAAAGGTTGGTTTAGTGATGGTAGGTCCCTGTCCCAAGCAATTGGTTCCCTGATCATTACAGAGATGTATCTATGATATTGATACTTTTGTTAATTTTTCCGAACATTTAGACCTAAAGCTTATGTGTCTGGGCACATAAGTTGTTGAATTTATAGATACAGGTATCCAATATATCCTGGTGATCTAGATTTTAAATTAATTTTTTAGCCTTTGTTCTTTGCAAGTTCTTGTTCCCCGACTTCCTCCCTTTTGGTCATTTTCATATTCACTATGAGACGTATAGTATTTTCGTTGATTAAATGCCCACGTTGCGCTTGTCAAGAAAAACATTTCTCCTTGCTCCCTTGGGTTATGAAACGCGCCTCATTTCATGCAGAAATTATTGGCCTTCATATGCTGTTAATTGAAGTGACTGTTTATAGAAAGTATCAGATGCCCTGTAGATTTAGGTTCTCATGTATTGTGAATATTGTCATGTTGAAATAATTTATTAAAAAAAATGCTCTTTTGAAGTATTCAGTAGGCTGTTTCTTTTTTGCTCTCTATATACAGTAGGCTTTTTTTTTTTTTTTTGGGGGACAATTTAATTATTTGCAGGTTTCCCACATTTTCTCATTATGCCTTTTTAGTAGTTAATACCTGTTATACTTTCATGGTTTTCCAGCAGTCTTAAGTTGCTTGGTTTCTCTTGTGAAATCCTGAGGAAAGTTATCTAATAACATGCCCTGGCAGGGATCTTGGCTTTTCTTACCGGGTGGCTGATACAAGCAGATGCAGGAGGTTGCAGGAGAACGTGGAGGTTACCTTCATGGACGAGGCGGTAACCCTTTCTTTCTCTGTCTCTGCATGTCTTTGTGTGTGCATCCCTTAACAATTCTTAATATTAGTTTTGGATTCTTAACGTTGACTCGAGTTTGGAGTTTGCAGCCTTGGACAGTGATGATTTGCTCTATCTTAAAGAGCAGATGGAAGCAGAGGAGGATGCAGAACGCCTCCTTAGACGCACTGAGAAACGAGCCTTTGCAGCATTCAAGATATCCTTTTCGTAATGAAAACTTGTAGTTATGCAAATTAAAGATACTCTTGTGGTGATAGCGTTCAAAGTAGCTTATGGTGGTTTTCTTTGCCCTTGTAAAAGACTTCTCCTATTGGATAAAATAATCTCTCAACCCCTTATGTTGCTGCCTCATTTCCTTAACATATGAATACAAAGCTGCTAGTTTGGCTGATTCTGCACCTGCATCTGTTCCCTTGGCGCTTCGTGTTGAGCCAAAGCCAAAGAGTGGAATCAGGTCTCTGTCTGTGTGCCACTACTGATTGCACCCCACATTACGCTTAATGTTTTCTAATGGATCAGGCTGGTTGCATGTGTACTTCACTCATATATGTAATCAAATCAATGCTTTCCCGATTGCAGACAGCAAGATCTATTGAAAAGAGTAGTGGAAGTCAAACCCAAAAGGCCCAGAGTTTCAAATCAAGCAGATTTATCAAATCCCAAGCATGACATTGACAATGACAAGGTGAAAGAGAACCCCTTGCTGAAAACAAACAAAACTGAAGGCGAAACAGAAGCTGAAAATCCTGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGATGAGGACGAATGAAAGAATGTGTGTAGGCCTCCATGTAAGATAGTTCAAAGTGTAATATTTATATGTAACTTAGAAGTTTTGACAGGATGGATGCTCACTTGTTCTAAATTTTGGAAGACTGTAATTAACTGTCGAGTTGAGCCAGTTGAGTTAATGAAATTAGTTGTGCTCCATTGAAGTTCTGATGGAATGCATATTTCATAGATGGTAG

mRNA sequence

CGCGTGATTTTTGCTTTCTGCTTGTTGGTTATCGCCGGTCAATCTCTCTAGGTGTGAAGGAAGAGGGAGAGAGGGAGCCTGGCAAAGGGGTTTCCTCTGGATTTCTAGTTCGAAGGGAAGCAATCAAGGTTCATAGCAATGGCTGGGAAAGAAGTTCGCGAATACACCAATCTCTCCGACCCAAAAGACAAGAAGTGGGGTAAAGGGAAGGATAAGATAGACGATGAAGATATTACGTTTCAACGGATGGTTGCGAAGGAAAGTTATCTAATAACATGCCCTGGCAGGGATCTTGGCTTTTCTTACCGGGTGGCTGATACAAGCAGATGCAGGAGGTTGCAGGAGAACGTGGAGGTTACCTTCATGGACGAGGCGATGGAAGCAGAGGAGGATGCAGAACGCCTCCTTAGACGCACTGAGAAACGAGCCTTTGCAGCATTCAAGATATCCTTTTCTTTGGCTGATTCTGCACCTGCATCTGTTCCCTTGGCGCTTCGTGTTGAGCCAAAGCCAAAGAGTGGAATCAGACAGCAAGATCTATTGAAAAGAGTAGTGGAAGTCAAACCCAAAAGGCCCAGAGTTTCAAATCAAGCAGATTTATCAAATCCCAAGCATGACATTGACAATGACAAGGTGAAAGAGAACCCCTTGCTGAAAACAAACAAAACTGAAGGCGAAACAGAAGCTGAAAATCCTGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGATGAGGACGAATGAAAGAATGTGTGTAGGCCTCCATGTAAGATAGTTCAAAGTGTAATATTTATATGTAACTTAGAAGTTTTGACAGGATGGATGCTCACTTGTTCTAAATTTTGGAAGACTGTAATTAACTGTCGAGTTGAGCCAGTTGAGTTAATGAAATTAGTTGTGCTCCATTGAAGTTCTGATGGAATGCATATTTCATAGATGGTAG

Coding sequence (CDS)

ATGGCTGGGAAAGAAGTTCGCGAATACACCAATCTCTCCGACCCAAAAGACAAGAAGTGGGGTAAAGGGAAGGATAAGATAGACGATGAAGATATTACGTTTCAACGGATGGTTGCGAAGGAAAGTTATCTAATAACATGCCCTGGCAGGGATCTTGGCTTTTCTTACCGGGTGGCTGATACAAGCAGATGCAGGAGGTTGCAGGAGAACGTGGAGGTTACCTTCATGGACGAGGCGATGGAAGCAGAGGAGGATGCAGAACGCCTCCTTAGACGCACTGAGAAACGAGCCTTTGCAGCATTCAAGATATCCTTTTCTTTGGCTGATTCTGCACCTGCATCTGTTCCCTTGGCGCTTCGTGTTGAGCCAAAGCCAAAGAGTGGAATCAGACAGCAAGATCTATTGAAAAGAGTAGTGGAAGTCAAACCCAAAAGGCCCAGAGTTTCAAATCAAGCAGATTTATCAAATCCCAAGCATGACATTGACAATGACAAGGTGAAAGAGAACCCCTTGCTGAAAACAAACAAAACTGAAGGCGAAACAGAAGCTGAAAATCCTGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGATGAGGACGAATGA

Protein sequence

MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVADTSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFSLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDIDNDKVKENPLLKTNKTEGETEAENPVKSLLGLAYASSDDEDE

Homology

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BLAST of ClCG04G012440 vs. TrEMBL
Match: A0A0A0LQC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032480 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.7e-78
Identity = 158/203 (77.83%), Postives = 173/203 (85.22%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAK   +    G   G+ +    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVA---GERGGYLHG--- 60

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFSLADSAPASVPLALR 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFK + SLADSAPASVPLALR
Sbjct: 61  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALR 120

Query: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDIDNDKVKENPLLKTNKTEGE 180
           VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHD DN+KVKE PL+KTNKTEGE
Sbjct: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKPLVKTNKTEGE 180

Query: 181 TEAENPVKSLLGLAYASSDDEDE 204
           TEAENPVKSLLGLAYASSDD+++
Sbjct: 181 TEAENPVKSLLGLAYASSDDDED 193

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BLAST of ClCG04G012440 vs. TrEMBL
Match: F6HE78_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g00280 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.6e-60
Identity = 138/221 (62.44%), Postives = 160/221 (72.40%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAG+EVREYTNL+DPKDKKWGKGKDKIDDEDITFQRMVAK   +    G   G+ +    
Sbjct: 1   MAGREVREYTNLTDPKDKKWGKGKDKIDDEDITFQRMVAK---MQEVAGERGGYLHG--- 60

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFS------LADSAPAS 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFKISF       LADS+PA+
Sbjct: 61  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFRARLSSVLADSSPAT 120

Query: 121 VPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVS----------NQAD--LSNPKHDID 180
           VPL LRVEPKPKSGIRQQDLLK+VVEVKPKR RVS          N +D  L N K ++D
Sbjct: 121 VPLPLRVEPKPKSGIRQQDLLKKVVEVKPKRHRVSSPSNGNQTAPNSSDSALKNHKSEVD 180

Query: 181 NDKVKENPLLKTNKTEGETEAENPVKSLLGLAYASSDDEDE 204
             K  E+PL ++ K E  T+AENPVKSLLGLAY SSDDED+
Sbjct: 181 QLKAGESPLSRSKKAEDATKAENPVKSLLGLAYESSDDEDD 211

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BLAST of ClCG04G012440 vs. TrEMBL
Match: V4T3G7_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10024397mg PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.9e-59
Identity = 136/231 (58.87%), Postives = 158/231 (68.40%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAG+EVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAK   +    G   G+ +    
Sbjct: 24  MAGREVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAK---MQEVAGERGGYLHG--- 83

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISF--------------- 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFKISF               
Sbjct: 84  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFLFYMLYFCSLTNGYK 143

Query: 121 --SLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNP------ 180
             SLADS+PASVPL LRVEPKP+SGIRQQDLLK+V+EVKPK+PRVS  +D + P      
Sbjct: 144 AASLADSSPASVPLPLRVEPKPRSGIRQQDLLKKVLEVKPKKPRVSTPSDGNQPKAISSN 203

Query: 181 ------KHDIDNDKVKENPLLKTNKTEGETEAENPVKSLLGLAYASSDDED 203
                 K ++D  K KE    K++K  G+ E E PVKSLLGLAYASSDDED
Sbjct: 204 SAANNIKPEVDQVKKKEQTTSKSDKPGGQNEVEKPVKSLLGLAYASSDDED 244

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BLAST of ClCG04G012440 vs. TrEMBL
Match: A0A067ELM5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028797mg PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.0e-58
Identity = 131/214 (61.21%), Postives = 154/214 (71.96%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAG+EVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAK   +    G   G+ +    
Sbjct: 1   MAGREVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAK---MQEVAGERGGYLHG--- 60

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFSLADSAPASVPLALR 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFK + SLADS+PA  PL LR
Sbjct: 61  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSSPA-FPLPLR 120

Query: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNP------------KHDIDNDKVKE 180
           VEPKP+SGIRQQDLLK+V+EVKPK+PRVS  +D + P            K ++D  K KE
Sbjct: 121 VEPKPRSGIRQQDLLKKVLEVKPKKPRVSTPSDGNQPKAIFSNSAANNIKPEVDQAKKKE 180

Query: 181 NPLLKTNKTEGETEAENPVKSLLGLAYASSDDED 203
               K++K  G+ E E PVKSLLGLAYASSDDED
Sbjct: 181 QTTSKSDKPGGQNEVEKPVKSLLGLAYASSDDED 203

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BLAST of ClCG04G012440 vs. TrEMBL
Match: A0A061G3P7_THECC (Ankyrin repeat domain-containing protein 50 isoform 3 OS=Theobroma cacao GN=TCM_013621 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-56
Identity = 127/214 (59.35%), Postives = 154/214 (71.96%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAG+EVREYTNLSDPKDKKWGKGKDK+DDED+ FQRMVAK   +    G   G+ +    
Sbjct: 1   MAGREVREYTNLSDPKDKKWGKGKDKLDDEDVAFQRMVAKMQEVA---GERGGYLHG--- 60

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFSLADSAPASVPLALR 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFK + SLADS+PA  PL LR
Sbjct: 61  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSSPALSPLPLR 120

Query: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQAD------------LSNPKHDIDNDKVKE 180
           VEPKPKSGIRQQDLLK+VVEVKPKRP+ S+ +D            L+N +     +K K 
Sbjct: 121 VEPKPKSGIRQQDLLKKVVEVKPKRPKFSSPSDRSQSNLHPSGSVLANSRESNQENKNK- 180

Query: 181 NPLLKTNKTEGETEAENPVKSLLGLAYASSDDED 203
           + +L++NK E + + ENP KSLLGLAYASSDDED
Sbjct: 181 HTILESNKAEKQNKVENPAKSLLGLAYASSDDED 203

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BLAST of ClCG04G012440 vs. TAIR10
Match: AT1G73350.2 (AT1G73350.2 unknown protein)

HSP 1 Score: 197.2 bits (500), Expect = 9.7e-51
Identity = 119/222 (53.60%), Postives = 145/222 (65.32%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAG+EV+EYTNLSDPKDKK GKGK  IDDED+TFQRMVAK   +    G   G+ +    
Sbjct: 1   MAGREVKEYTNLSDPKDKKSGKGK--IDDEDVTFQRMVAKMQEVA---GERGGYLHG--- 60

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFSLADSAPASVPLALR 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFK + + ADS+PAS+PL LR
Sbjct: 61  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAATQADSSPASIPLPLR 120

Query: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSN----------QADLSNPKHDIDNDKVKEN- 180
           VEPKPKSGIRQQDLL++VVEVKPKRP++S           ++D    +  +  DK KE  
Sbjct: 121 VEPKPKSGIRQQDLLRKVVEVKPKRPKISTPSSPSLSPPVRSDRGPTEAKVHRDKQKEEA 180

Query: 181 -PLLKT--------NKTEGETEAENPVKSLLGLAYASSDDED 203
            P+LK           TE   + +N  K LLGLAY SSD+ED
Sbjct: 181 MPVLKKPGADRNDGKATESNGQGQNAPKGLLGLAYDSSDEED 210

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BLAST of ClCG04G012440 vs. NCBI nr
Match: gi|659066344|ref|XP_008439948.1| (PREDICTED: uncharacterized protein LOC103484557 [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 1.8e-78
Identity = 160/203 (78.82%), Postives = 173/203 (85.22%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAK   +    G   G+ +    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVA---GERGGYLHG--- 60

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFSLADSAPASVPLALR 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFK + SLADSAPASVPLALR
Sbjct: 61  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALR 120

Query: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDIDNDKVKENPLLKTNKTEGE 180
           VEPKPKSGIRQQDLLKRVVEVKPKRPRVSN +DLSNPKHD +NDKVKENPL+KTNKTEGE
Sbjct: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLVKTNKTEGE 180

Query: 181 TEAENPVKSLLGLAYASSDDEDE 204
           TEAENPVKSLLGLAYASSDDEDE
Sbjct: 181 TEAENPVKSLLGLAYASSDDEDE 193

[Close]

BLAST of ClCG04G012440 vs. NCBI nr
Match: gi|449439249|ref|XP_004137399.1| (PREDICTED: uncharacterized protein LOC101214943 [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 6.7e-78
Identity = 158/203 (77.83%), Postives = 173/203 (85.22%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAK   +    G   G+ +    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVA---GERGGYLHG--- 60

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFSLADSAPASVPLALR 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFK + SLADSAPASVPLALR
Sbjct: 61  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALR 120

Query: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDIDNDKVKENPLLKTNKTEGE 180
           VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHD DN+KVKE PL+KTNKTEGE
Sbjct: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKPLVKTNKTEGE 180

Query: 181 TEAENPVKSLLGLAYASSDDEDE 204
           TEAENPVKSLLGLAYASSDD+++
Sbjct: 181 TEAENPVKSLLGLAYASSDDDED 193

[Close]

BLAST of ClCG04G012440 vs. NCBI nr
Match: gi|225454563|ref|XP_002263294.1| (PREDICTED: uncharacterized protein LOC100242649 isoform X1 [Vitis vinifera])

HSP 1 Score: 241.5 bits (615), Expect = 1.3e-60
Identity = 136/215 (63.26%), Postives = 159/215 (73.95%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAG+EVREYTNL+DPKDKKWGKGKDKIDDEDITFQRMVAK   +    G   G+ +    
Sbjct: 1   MAGREVREYTNLTDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVA---GERGGYLHG--- 60

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFSLADSAPASVPLALR 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFK + SLADS+PA+VPL LR
Sbjct: 61  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSSPATVPLPLR 120

Query: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVS----------NQAD--LSNPKHDIDNDKVKE 180
           VEPKPKSGIRQQDLLK+VVEVKPKR RVS          N +D  L N K ++D  K  E
Sbjct: 121 VEPKPKSGIRQQDLLKKVVEVKPKRHRVSSPSNGNQTAPNSSDSALKNHKSEVDQLKAGE 180

Query: 181 NPLLKTNKTEGETEAENPVKSLLGLAYASSDDEDE 204
           +PL ++ K E  T+AENPVKSLLGLAY SSDDED+
Sbjct: 181 SPLSRSKKAEDATKAENPVKSLLGLAYESSDDEDD 205

[Close]

BLAST of ClCG04G012440 vs. NCBI nr
Match: gi|1009133389|ref|XP_015883875.1| (PREDICTED: uncharacterized protein LOC107419630 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 240.4 bits (612), Expect = 2.8e-60
Identity = 134/215 (62.33%), Postives = 156/215 (72.56%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAG+EVREYTNL+DPKDKKWGKGKDKIDDEDITFQRMVAK   +    G   G+ +    
Sbjct: 1   MAGREVREYTNLTDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVA---GERGGYLHG--- 60

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISFSLADSAPASVPLALR 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFK + SLADS+PA+VPL LR
Sbjct: 61  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSSPATVPLPLR 120

Query: 121 VEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQAD-------------LSNPKHDIDNDKVK 180
           VEPKPKSGIRQQDLLK+VVEVKPKRPRV++  D              +N     + +K K
Sbjct: 121 VEPKPKSGIRQQDLLKKVVEVKPKRPRVTSPCDGNRSASVSNASTNSTNLNSKTEQEKGK 180

Query: 181 ENPLLKTNKTEGETEAENPVKSLLGLAYASSDDED 203
             P +K NK  GET+ ENPVKSLLGLAYASSDDED
Sbjct: 181 YTPDVKPNKENGETKVENPVKSLLGLAYASSDDED 205

[Close]

BLAST of ClCG04G012440 vs. NCBI nr
Match: gi|567898010|ref|XP_006441493.1| (hypothetical protein CICLE_v10024397mg, partial [Citrus clementina])

HSP 1 Score: 235.7 bits (600), Expect = 7.0e-59
Identity = 136/231 (58.87%), Postives = 158/231 (68.40%), Query Frame = 1


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKESYLITCPGRDLGFSYRVAD 60
           MAG+EVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAK   +    G   G+ +    
Sbjct: 24  MAGREVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAK---MQEVAGERGGYLHG--- 83

Query: 61  TSRCRRLQENVEVTFMDEAMEAEEDAERLLRRTEKRAFAAFKISF--------------- 120
               R   ++ ++ ++ E MEAEEDAERLLRRTEKRAFAAFKISF               
Sbjct: 84  ----RGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFLFYMLYFCSLTNGYK 143

Query: 121 --SLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNP------ 180
             SLADS+PASVPL LRVEPKP+SGIRQQDLLK+V+EVKPK+PRVS  +D + P      
Sbjct: 144 AASLADSSPASVPLPLRVEPKPRSGIRQQDLLKKVLEVKPKKPRVSTPSDGNQPKAISSN 203

Query: 181 ------KHDIDNDKVKENPLLKTNKTEGETEAENPVKSLLGLAYASSDDED 203
                 K ++D  K KE    K++K  G+ E E PVKSLLGLAYASSDDED
Sbjct: 204 SAANNIKPEVDQVKKKEQTTSKSDKPGGQNEVEKPVKSLLGLAYASSDDED 244

The following BLAST results are available for this feature:

BLAST of ClCG04G012440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQC3_CUCSA	4.7e-78	77.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032480 PE=4 SV=1	[more]
F6HE78_VITVI	2.6e-60	62.44	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g00280 PE=4 SV=...	[more]
V4T3G7_9ROSI	4.9e-59	58.87	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10024397mg PE=...	[more]
A0A067ELM5_CITSI	7.0e-58	61.21	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028797mg PE=4 SV=1	[more]
A0A061G3P7_THECC	1.7e-56	59.35	Ankyrin repeat domain-containing protein 50 isoform 3 OS=Theobroma cacao GN=TCM_...	[more]

BLAST of ClCG04G012440 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73350.2	9.7e-51	53.60	unknown protein	[more]

BLAST of ClCG04G012440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066344\|ref\|XP_008439948.1\|	1.8e-78	78.82	PREDICTED: uncharacterized protein LOC103484557 [Cucumis melo]	[more]
gi\|449439249\|ref\|XP_004137399.1\|	6.7e-78	77.83	PREDICTED: uncharacterized protein LOC101214943 [Cucumis sativus]	[more]
gi\|225454563\|ref\|XP_002263294.1\|	1.3e-60	63.26	PREDICTED: uncharacterized protein LOC100242649 isoform X1 [Vitis vinifera]	[more]
gi\|1009133389\|ref\|XP_015883875.1\|	2.8e-60	62.33	PREDICTED: uncharacterized protein LOC107419630 isoform X1 [Ziziphus jujuba]	[more]
gi\|567898010\|ref\|XP_006441493.1\|	7.0e-59	58.87	hypothetical protein CICLE_v10024397mg, partial [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG04G012440.1	ClCG04G012440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 76..96 scor
None	No IPR available	PANTHER	PTHR37202	FAMILY NOT NAMED	coord: 2..203 score: 1.1
None	No IPR available	PANTHER	PTHR37202:SF1	SUBFAMILY NOT NAMED	coord: 2..203 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG04G012440	Csa1G032480	Cucumber (Chinese Long) v2	cuwcgB057
ClCG04G012440	MELO3C001966	Melon (DHL92) v3.5.1	mewcgB154
ClCG04G012440	Cla018628	Watermelon (97103) v1	wcgwmB255
ClCG04G012440	Bhi08G001635	Wax gourd	wcgwgoB402
ClCG04G012440	CSPI01G05400	Wild cucumber (PI 183967)	cpiwcgB059
ClCG04G012440	Cucsa.112560	Cucumber (Gy14) v1	cgywcgB160
ClCG04G012440	CmaCh01G007750	Cucurbita maxima (Rimu)	cmawcgB405
ClCG04G012440	CmoCh01G008150	Cucurbita moschata (Rifu)	cmowcgB404
ClCG04G012440	Lsi02G000540	Bottle gourd (USVL1VR-Ls)	lsiwcgB192
ClCG04G012440	Cp4.1LG02g10230	Cucurbita pepo (Zucchini)	cpewcgB507
ClCG04G012440	CsGy1G005150	Cucumber (Gy14) v2	cgybwcgB053
ClCG04G012440	MELO3C001966.2	Melon (DHL92) v3.6.1	medwcgB146
ClCG04G012440	Carg21660	Silver-seed gourd	carwcgB0054
ClCG04G012440	CsaV3_1G005260	Cucumber (Chinese Long) v3	cucwcgB063

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG04G012440	Silver-seed gourd	carwcgB0382
ClCG04G012440	Watermelon (97103) v2	wcgwmbB200
ClCG04G012440	Cucurbita maxima (Rimu)	cmawcgB205
ClCG04G012440	Cucurbita moschata (Rifu)	cmowcgB193
ClCG04G012440	Cucurbita pepo (Zucchini)	cpewcgB470