CSPI01G05400 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G05400
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ankyrin repeat domain-containing protein 50 isoform 3
Location	Chr1 : 3484527 .. 3487716 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGTTATCTGCAGGTTTCCCACATTTTCTACTTATGCCTTGTTAGTAGTGTAATATTTGTTGTACTTGGTTTTCAAGTTCTTTGGTTTCTCTTGTGAAATTCTCAGGAAAGTTTTCTAATAACATGCCCTGGCAGGGATCTTGGCTTTTCTTACCGGGTGGCTGATACAAGCAGATGCAGGAGGTTGCAGGAGAACGTGGAGGTTACCTTCATGGACGAGGCGGTAACACTCTCTGTCTCTGTCTCTTTGTTTGTTTGTGCATCCTCTAACAATTCTTGATACTAGTTTTGGATTCTTAATTTTAACTCGAGTTTGGAGTTTGCAGCCCTGGACAGTGATGATTTGCTCTATCTTAAGGAGCAGATGGAAGCAGAGGAGGATGCAGAGCGCCTCCTTAGACGCACTGAGAAACGAGCCTTTGCAGCATTCAAGATATCCTTTTTTCATTATGAAAACTTGTAGTGATGGAAATTAAAGATACTCTCATGTTGATTAGGGATTCAAAGTAGCTATGGTGACTTCCTTTTTCCTTCTAAAAGTTCTCTCCTCTTAGATAAAATAATCTCTCAACCCCTCATTTTACTGTGTCATTTCCTTAACAAAATCAATACAAAGCTGCTAGTTTGGCTGATTCTGCACCCGCATCTGTTCCCTTGGCCCTTCGTGTTGAGCCAAAACCAAAGAGTGGAATCAGGTTTCTGTCTGCATTTTACCACTTATGGTTGCATACCCACTACGCTTAATGTTTTCTATTGGATCAGGCCGATTGCGTGTGTACTTCGCTCATTTTATATGTGATCAATGGTTTCTGGATTGCAGACAGCAAGATCTATTGAAAAGAGTAGTGGAAGTTAAACCCAAAAGACCCAGAGTTTCAAATCAAGCAGATTTATCAAATCCGAAGCATGACAATGACAATGAAAAGGTGAAAGAGAAGCCGTTAGTGAAAACAAACAAAACTGAAGGAGAGACAGAAGCTGAAAATCCAGTCAAGAGTTTACTAGGTTTGGCATATGCTAGCTCTGATGATGATGAGGACGAATGAAAGAATGTCTGTAGGGTTCAATGTAAGATAGTTCAGGGTGTAATATCAAATGTAACTTTTAGGAGTTTTGAAGGGATCCTCATTTTGTTCTAAATTTTGAAGACTGTAATTAACTGTTCGAGTTAAACCTTGCTGAGTTAATGAAATTAGTTGTTGCTC

mRNA sequence

ATGCAGGAGGTTGCAGGAGAACGTGGAGGTTACCTTCATGGACGAGGCGCCCTGGACAGTGATGATTTGCTCTATCTTAAGGAGCAGATGGAAGCAGAGGAGGATGCAGAGCGCCTCCTTAGACGCACTGAGAAACGAGCCTTTGCAGCATTCAAGAAAGCTGCTAGTTTGGCTGATTCTGCACCCGCATCTGTTCCCTTGGCCCTTCGTGTTGAGCCAAAACCAAAGAGTGGAATCAGACAGCAAGATCTATTGAAAAGAGTAGTGGAAGTTAAACCCAAAAGACCCAGAGTTTCAAATCAAGCAGATTTATCAAATCCGAAGCATGACAATGACAATGAAAAGGTGAAAGAGAAGCCGTTAGTGAAAACAAACAAAACTGAAGGAGAGACAGAAGCTGAAAATCCAGTCAAGAGTTTACTAGGTTTGGCATATGCTAGCTCTGATGATGATGAGGACGAATGA

Coding sequence (CDS)

ATGCAGGAGGTTGCAGGAGAACGTGGAGGTTACCTTCATGGACGAGGCGCCCTGGACAGTGATGATTTGCTCTATCTTAAGGAGCAGATGGAAGCAGAGGAGGATGCAGAGCGCCTCCTTAGACGCACTGAGAAACGAGCCTTTGCAGCATTCAAGAAAGCTGCTAGTTTGGCTGATTCTGCACCCGCATCTGTTCCCTTGGCCCTTCGTGTTGAGCCAAAACCAAAGAGTGGAATCAGACAGCAAGATCTATTGAAAAGAGTAGTGGAAGTTAAACCCAAAAGACCCAGAGTTTCAAATCAAGCAGATTTATCAAATCCGAAGCATGACAATGACAATGAAAAGGTGAAAGAGAAGCCGTTAGTGAAAACAAACAAAACTGAAGGAGAGACAGAAGCTGAAAATCCAGTCAAGAGTTTACTAGGTTTGGCATATGCTAGCTCTGATGATGATGAGGACGAATGA

Homology

[Close]

BLAST of CSPI01G05400 vs. TrEMBL
Match: A0A0A0LQC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032480 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 3.7e-75
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 41  MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 100

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKP 120
           APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKP
Sbjct: 101 APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKP 160

Query: 121 LVKTNKTEGETEAENPVKSLLGLAYASSDDDEDE 155
           LVKTNKTEGETEAENPVKSLLGLAYASSDDDEDE
Sbjct: 161 LVKTNKTEGETEAENPVKSLLGLAYASSDDDEDE 194

[Close]

BLAST of CSPI01G05400 vs. TrEMBL
Match: A0A061FX65_THECC (Ankyrin repeat domain-containing protein 50 isoform 2 OS=Theobroma cacao GN=TCM_013621 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-50
Identity = 117/164 (71.34%), Postives = 132/164 (80.49%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQAD------------LSNPK 120
           +PA  PL LRVEPKPKSGIRQQDLLK+VVEVKPKRP+ S+ +D            L+N +
Sbjct: 61  SPALSPLPLRVEPKPKSGIRQQDLLKKVVEVKPKRPKFSSPSDRSQSNLHPSGSVLANSR 120

Query: 121 HDNDNEKVKEKPLVKTNKTEGETEAENPVKSLLGLAYASSDDDE 153
             N   K K   ++++NK E + + ENP KSLLGLAYASSDD++
Sbjct: 121 ESNQENKNKH-TILESNKAEKQNKVENPAKSLLGLAYASSDDED 163

[Close]

BLAST of CSPI01G05400 vs. TrEMBL
Match: A0A061G3P7_THECC (Ankyrin repeat domain-containing protein 50 isoform 3 OS=Theobroma cacao GN=TCM_013621 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.4e-50
Identity = 117/164 (71.34%), Postives = 132/164 (80.49%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 41  MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 100

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQAD------------LSNPK 120
           +PA  PL LRVEPKPKSGIRQQDLLK+VVEVKPKRP+ S+ +D            L+N +
Sbjct: 101 SPALSPLPLRVEPKPKSGIRQQDLLKKVVEVKPKRPKFSSPSDRSQSNLHPSGSVLANSR 160

Query: 121 HDNDNEKVKEKPLVKTNKTEGETEAENPVKSLLGLAYASSDDDE 153
             N   K K   ++++NK E + + ENP KSLLGLAYASSDD++
Sbjct: 161 ESNQENKNKH-TILESNKAEKQNKVENPAKSLLGLAYASSDDED 203

[Close]

BLAST of CSPI01G05400 vs. TrEMBL
Match: A0A0D2N3U7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G071100 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.1e-50
Identity = 116/163 (71.17%), Postives = 133/163 (81.60%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 41  MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 100

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVS---------NQADLSNPKHDN 120
           +PAS PL LRVEPKPKSGIRQQDLLK+VVEVKPKRP++S         NQ++L +   ++
Sbjct: 101 SPASFPLPLRVEPKPKSGIRQQDLLKKVVEVKPKRPKISSPSSSEPEGNQSNLQSQGQES 160

Query: 121 DNEKVKEKPLVKTNKTEGETEAENPVKSLLGLAYASSDDDEDE 155
           + EK     + ++N  E + + E   KSLLGLAYASSDDD+D+
Sbjct: 161 NLEKKIGHCVSESNTAEKQNKVEKSTKSLLGLAYASSDDDDDD 203

[Close]

BLAST of CSPI01G05400 vs. TrEMBL
Match: A0A0D2LSL3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G071100 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.1e-50
Identity = 116/163 (71.17%), Postives = 133/163 (81.60%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVS---------NQADLSNPKHDN 120
           +PAS PL LRVEPKPKSGIRQQDLLK+VVEVKPKRP++S         NQ++L +   ++
Sbjct: 61  SPASFPLPLRVEPKPKSGIRQQDLLKKVVEVKPKRPKISSPSSSEPEGNQSNLQSQGQES 120

Query: 121 DNEKVKEKPLVKTNKTEGETEAENPVKSLLGLAYASSDDDEDE 155
           + EK     + ++N  E + + E   KSLLGLAYASSDDD+D+
Sbjct: 121 NLEKKIGHCVSESNTAEKQNKVEKSTKSLLGLAYASSDDDDDD 163

[Close]

BLAST of CSPI01G05400 vs. TAIR10
Match: AT1G73350.2 (AT1G73350.2 unknown protein)

HSP 1 Score: 188.0 bits (476), Expect = 4.5e-48
Identity = 111/172 (64.53%), Postives = 128/172 (74.42%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAA+ ADS
Sbjct: 39  MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAATQADS 98

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVS--NQADLSNP----------K 120
           +PAS+PL LRVEPKPKSGIRQQDLL++VVEVKPKRP++S  +   LS P          K
Sbjct: 99  SPASIPLPLRVEPKPKSGIRQQDLLRKVVEVKPKRPKISTPSSPSLSPPVRSDRGPTEAK 158

Query: 121 HDNDNEKVKEKPLVKT--------NKTEGETEAENPVKSLLGLAYASSDDDE 153
              D +K +  P++K           TE   + +N  K LLGLAY SSD+++
Sbjct: 159 VHRDKQKEEAMPVLKKPGADRNDGKATESNGQGQNAPKGLLGLAYDSSDEED 210

[Close]

BLAST of CSPI01G05400 vs. NCBI nr
Match: gi|449439249|ref|XP_004137399.1| (PREDICTED: uncharacterized protein LOC101214943 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 5.3e-75
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 41  MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 100

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKP 120
           APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKP
Sbjct: 101 APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKP 160

Query: 121 LVKTNKTEGETEAENPVKSLLGLAYASSDDDEDE 155
           LVKTNKTEGETEAENPVKSLLGLAYASSDDDEDE
Sbjct: 161 LVKTNKTEGETEAENPVKSLLGLAYASSDDDEDE 194

[Close]

BLAST of CSPI01G05400 vs. NCBI nr
Match: gi|659066344|ref|XP_008439948.1| (PREDICTED: uncharacterized protein LOC103484557 [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 1.8e-70
Identity = 145/153 (94.77%), Postives = 151/153 (98.69%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 41  MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 100

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKP 120
           APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSN +DLSNPKHDN+N+KVKE P
Sbjct: 101 APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNLSDLSNPKHDNNNDKVKENP 160

Query: 121 LVKTNKTEGETEAENPVKSLLGLAYASSDDDED 154
           LVKTNKTEGETEAENPVKSLLGLAYASSDD+++
Sbjct: 161 LVKTNKTEGETEAENPVKSLLGLAYASSDDEDE 193

[Close]

BLAST of CSPI01G05400 vs. NCBI nr
Match: gi|1009133389|ref|XP_015883875.1| (PREDICTED: uncharacterized protein LOC107419630 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 219.5 bits (558), Expect = 4.0e-54
Identity = 126/165 (76.36%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 41  MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 100

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQAD------LSNPKHDNDN- 120
           +PA+VPL LRVEPKPKSGIRQQDLLK+VVEVKPKRPRV++  D      +SN   ++ N 
Sbjct: 101 SPATVPLPLRVEPKPKSGIRQQDLLKKVVEVKPKRPRVTSPCDGNRSASVSNASTNSTNL 160

Query: 121 ------EKVKEKPLVKTNKTEGETEAENPVKSLLGLAYASSDDDE 153
                 EK K  P VK NK  GET+ ENPVKSLLGLAYASSDD++
Sbjct: 161 NSKTEQEKGKYTPDVKPNKENGETKVENPVKSLLGLAYASSDDED 205

[Close]

BLAST of CSPI01G05400 vs. NCBI nr
Match: gi|1009133391|ref|XP_015883876.1| (PREDICTED: uncharacterized protein LOC107419630 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 219.5 bits (558), Expect = 4.0e-54
Identity = 126/165 (76.36%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVSNQAD------LSNPKHDNDN- 120
           +PA+VPL LRVEPKPKSGIRQQDLLK+VVEVKPKRPRV++  D      +SN   ++ N 
Sbjct: 61  SPATVPLPLRVEPKPKSGIRQQDLLKKVVEVKPKRPRVTSPCDGNRSASVSNASTNSTNL 120

Query: 121 ------EKVKEKPLVKTNKTEGETEAENPVKSLLGLAYASSDDDE 153
                 EK K  P VK NK  GET+ ENPVKSLLGLAYASSDD++
Sbjct: 121 NSKTEQEKGKYTPDVKPNKENGETKVENPVKSLLGLAYASSDDED 165

[Close]

BLAST of CSPI01G05400 vs. NCBI nr
Match: gi|225454563|ref|XP_002263294.1| (PREDICTED: uncharacterized protein LOC100242649 isoform X1 [Vitis vinifera])

HSP 1 Score: 216.5 bits (550), Expect = 3.4e-53
Identity = 125/165 (75.76%), Postives = 135/165 (81.82%), Query Frame = 1


Query: 1   MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 60
           MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS
Sbjct: 41  MQEVAGERGGYLHGRGALDSDDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADS 100

Query: 61  APASVPLALRVEPKPKSGIRQQDLLKRVVEVKPKRPRVS----------NQAD--LSNPK 120
           +PA+VPL LRVEPKPKSGIRQQDLLK+VVEVKPKR RVS          N +D  L N K
Sbjct: 101 SPATVPLPLRVEPKPKSGIRQQDLLKKVVEVKPKRHRVSSPSNGNQTAPNSSDSALKNHK 160

Query: 121 HDNDNEKVKEKPLVKTNKTEGETEAENPVKSLLGLAYASSDDDED 154
            + D  K  E PL ++ K E  T+AENPVKSLLGLAY SSDD++D
Sbjct: 161 SEVDQLKAGESPLSRSKKAEDATKAENPVKSLLGLAYESSDDEDD 205

The following BLAST results are available for this feature:

BLAST of CSPI01G05400 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G05400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQC3_CUCSA	3.7e-75	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032480 PE=4 SV=1	[more]
A0A061FX65_THECC	1.4e-50	71.34	Ankyrin repeat domain-containing protein 50 isoform 2 OS=Theobroma cacao GN=TCM_...	[more]
A0A061G3P7_THECC	1.4e-50	71.34	Ankyrin repeat domain-containing protein 50 isoform 3 OS=Theobroma cacao GN=TCM_...	[more]
A0A0D2N3U7_GOSRA	4.1e-50	71.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G071100 PE=4 SV=1	[more]
A0A0D2LSL3_GOSRA	4.1e-50	71.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G071100 PE=4 SV=1	[more]

BLAST of CSPI01G05400 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73350.2	4.5e-48	64.53	unknown protein	[more]

BLAST of CSPI01G05400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439249\|ref\|XP_004137399.1\|	5.3e-75	100.00	PREDICTED: uncharacterized protein LOC101214943 [Cucumis sativus]	[more]
gi\|659066344\|ref\|XP_008439948.1\|	1.8e-70	94.77	PREDICTED: uncharacterized protein LOC103484557 [Cucumis melo]	[more]
gi\|1009133389\|ref\|XP_015883875.1\|	4.0e-54	76.36	PREDICTED: uncharacterized protein LOC107419630 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009133391\|ref\|XP_015883876.1\|	4.0e-54	76.36	PREDICTED: uncharacterized protein LOC107419630 isoform X2 [Ziziphus jujuba]	[more]
gi\|225454563\|ref\|XP_002263294.1\|	3.4e-53	75.76	PREDICTED: uncharacterized protein LOC100242649 isoform X1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G05400.3	CSPI01G05400.3	mRNA
CSPI01G05400.2	CSPI01G05400.2	mRNA
CSPI01G05400.1	CSPI01G05400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 26..46 scor
None	No IPR available	PANTHER	PTHR37202	FAMILY NOT NAMED	coord: 1..153 score: 8.5
None	No IPR available	PANTHER	PTHR37202:SF1	SUBFAMILY NOT NAMED	coord: 1..153 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G05400	Cla018628	Watermelon (97103) v1	cpiwmB066
CSPI01G05400	Csa1G032480	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G05400	MELO3C001966	Melon (DHL92) v3.5.1	cpimeB024
CSPI01G05400	ClCG04G012440	Watermelon (Charleston Gray)	cpiwcgB059
CSPI01G05400	Lsi02G000540	Bottle gourd (USVL1VR-Ls)	cpilsiB021
CSPI01G05400	MELO3C001966.2	Melon (DHL92) v3.6.1	cpimedB023
CSPI01G05400	CsaV3_1G005260	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G05400	Bhi08G001635	Wax gourd	cpiwgoB034
CSPI01G05400	Cucsa.112560	Cucumber (Gy14) v1	cgycpiB137
CSPI01G05400	CmaCh01G007750	Cucurbita maxima (Rimu)	cmacpiB431
CSPI01G05400	CmoCh01G008150	Cucurbita moschata (Rifu)	cmocpiB421
CSPI01G05400	Cp4.1LG02g10230	Cucurbita pepo (Zucchini)	cpecpiB535
CSPI01G05400	CsGy1G005150	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G05400	Carg21660	Silver-seed gourd	carcpiB0056

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G05400	Watermelon (97103) v2	cpiwmbB055
CSPI01G05400	Cucurbita maxima (Rimu)	cmacpiB208
CSPI01G05400	Cucurbita moschata (Rifu)	cmocpiB195
CSPI01G05400	Cucurbita pepo (Zucchini)	cpecpiB519
CSPI01G05400	Silver-seed gourd	carcpiB0421