Carg21660 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21660
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ankyrin repeat protein
Location	Cucurbita_argyrosperma_scaffold_132 : 56314 .. 59801 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCTCAATCTCTCTCAGAATCAGAGAGGCGTCGAAGGAGGGAGCCTGCTAAAGGGTTTTCCTCTGGATTTTCTAGTTCCAAGGAAAGAGATTGAGATTGAGATTGAGATTCATAGCAATGGCTGGAAAGGAAGTTCGGGAATACACCAATCTCTCCGACCCAAAAGGTACCCACATGAAATTATTATACTTGACTTATGATCCTTGTTCTTATTTTTGTATTTCTGTGTGTCTGCCTTTTCCCATTGCGGTTTGCAATTACAGACAAGAAGTGGGGTAAAGGGAAGGATAAGATAGACGATGAAGATATCACTTTTCAACGAATGGTTGCGAAGGTTAGCGCAATTTTGCCTCAACCACCCTCTTTCGCTTAGTTCTTGAATAATTAAGTTCTCTTTTCTGTCTTTCTATTTTCATCGTATAATCTTTAATCAGTTTCTTCGAGTCATCATTTTGCCGAATTGGACTGATCAATATTAAGGTAAAACTGGAGAATTTTGTCAGAGTTTGTTCTGTTAATCTGACTCTCACTATTTGTAATTGGACATTGAATCGATTACATACTATTTTAACCCTTCTGTTATACAAAAAAAACGAAGGTATTTTGTTGTTTTGAATAGAAAAAGGGAGGAAATTGACTCTTCAACTTGAAGATATTCATTAGTGTAGGCGCCATTCTCATTCTTCCGAATAGTCTTAAAATCAATCAAAAGGAGACACAGCACAATGAACTGTTCTATTGAATAAATTATGATATGCAAATGAGAGCATCAGGAACTTCAGTTGAGACTAAGAGCATGTCACAGAACATGATGACAAGTTCCTCGTTTCTTTTTCTTCCAAACCAAAACTTGTTAATGCTATTTGATTTTTGAAAATTAAGCTTATAAACATTACTTTCTCTTATGAGTTTCTTTGTATTCTTATCTACCCTTTATAGATGTTTTCAAAATCCAAGCCAATATTTGAAAATGGTAAAAGGGTAGTTTTTACATGTTTGTTTTTGCTTTTGAAATTTGGCTAAAAATTCAAATCTTTTCATAGGAAAGAAGCACAATTTTCCAAAACCAAAAGCTAAATGGTTATCAAATGGGGTTGTAGTACTTTACTTGTGACTTACACATGTATTGACTAAATGTCACTCTCCTTTCTTCTGTAAGTTTGTTAGTTAATTACTGGTAGATGGGATACAGCATGCGGATTATGATGCCTAGTTTCGTACATCTTCTTTGGATGCTTTGGACCCTTGATTACTTATAATTTTATAAATCTTATAGAACTCTCTGCTTTCAAGTTTTTAACTTAGGTCTTCAAGAAAAAAAATGTCATGTTGTCTTGGAGCTAGCCTTTGGTCAACTAAGCCTCTCCGAGGATTAATAGGGTGGGTCATGAACATAATGCTAGAAGGCTCCAACCCTCCAGTTGTTGAAAAGAAAAATGAAAGAAAAAAAAGAGAAAAAGAAGAGGAAGAACAACACCATGTTTGTAGTGTAGCAATACTGTTATCAATTTCAACTGACAAGGGTTCTATTACTTAAGATACGAGCAACCTGTGGGATCATAAGTGATGGTGGCTCATTCCTTTCCTTTTAGTTCGCTGGCTTAAGATTTTTTTTTTTTTTTTTTTTTTTTAATTTAATTTTTGTTGCCACATTCTGTTGTCATATTCTACTTCATAACTTCCTTAGACAGAGATGGATTTTGATCGGGAGATAGGCCTTTTGGATAGAGCTTGCATGCTTCTCTGAGTAGCCAATGTTTCTTAATCTTGGAATGTATTAAGACTAAATTCTCACAAATAGAACATTTAACGGTTGACGTTGTGTTGTAGAATAAAAATATCCTTGTGTTGTAGAATAAAAACATAATTTCATGGAGCTGGATTTTGATCGGCAGATGTAGCTTGGTTGACATTGTGTTGTAGAGCCAGCTTGACATGTAATAAAGCTTTAAGTTTTCATTTGCTCAATCCAGCATGTTTGTCCTACTGTATTGATTATCCTTTTTGCATCTCAAAAGGCCAAATTCCAAATCTGTCATATATGTAAGGACATGTATAATACTGGTTATCTCAAGAGTGATCTCAAGGTTGGTTTACTGATGTAGTTCCCCAGGTGATTGCTTCCCTTATCATTACAGAGATGTATCTGCAAGATTGATATTTTTGTTAATACACCTAGCTTTTAAGACCAAAAGGTGTCGTATATGAATTATATGTTTTGGAGTTCGGCTTGTAGCGCCCTTATTTGGTATAGATTTTATTCCAAGCTACCCATTTGTTAATCCTGTAGGCTGAAACTGTGAAATTATATTGGCTTATTGTGCTCTTTATCCATTTCTTGCTTTGATCTTTTCCCCAGTTTTTGTTATATCCAGGTTTCCCACATTTTCTCATTATAGCTTTTGAGTAATGTAATAGCTTTTGCTTGGTTTCTCTTGTGTGATCCTGAGGAAAGTTTTCTAATAACATGCCCTGGCAGGGATCTTGGCTTTTGTTACCGGGTGGATGATACAAGCAGATGCAAGAGGTTGCAGGAGAACGTGGTGGTTACCTTCATGGACGTGGCGGTAACCTTCTCTTTCTCTTTGAATCTGTGTGTGTGTTTTTTTTTTTTGTAAGCGTATCCCCTAACAATTTTTAATATTAGTTTTGGATTCTTGATATTGACTTGAGTTTGGAGTTTGCAGCCTTGGACAGTGATGATTTGCTCTATCTCAAGGAGCAGATGGAAGCTGAGGAGGATGCAGAGCGCCTCCTCAGACGCACCGAGAAACGAGCCTTTGCAGCATTTAAGATATCCTTTTCATAACAAAACTCATATTTATTCAAATTAAAAGATGAAGTAAATTCCGTATGAACCCTTTGATGCTTGTTTATAGTTGTATCACGAAGGTGCCAATCTGCGGAAGGTTGTAGCGTCAGTGAATTCAGAACACTGCTGTTTAGGCAATAAAGGAGGAGAGGTCTTTCTATCCTCTTTCTCTCTTACCAAATAGTTAAATGTGTGGTTTCAAGCAAATGGTAGTAGTAAAGAGTGTCATTTTTCCCTTAACAAATAATTACAAAGCTGCTAGTTTAGCTGATTCTGCACCTGCATCTGTTCCCTTGGCTCTTCGTGTGGAGCCAAAGCCAAAGAGTGGAATTAGGTCTCTCTGTCTCTATGCCACTTAACTCATTGCGCTTGAATTTTTCCAAGGTAGCTGGCTGGTTACCTGTGTACATCACCCATATGTGTGATCAATAGTTTGTTAAATGCAGGCAGCAGGATCTCCTGAAAAGGGTAGTTGAAGTGAAACGGAAAAGGCCCAGAGTTTCAAGTCCAGCAGAGTTAGCAAATCCGAAGCATGAGAGTGAGAATGAAAAGGTGAAAGAGAAGAAGGCCTTATCATCAAAAACAGACAAAAGTGAAGGGGAGAAAGAAGCTGAAAATCCAGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGAAGAGGACGAATGA

mRNA sequence

CTGCTCAATCTCTCTCAGAATCAGAGAGGCGTCGAAGGAGGGAGCCTGCTAAAGGGTTTTCCTCTGGATTTTCTAGTTCCAAGGAAAGAGATTGAGATTGAGATTGAGATTCATAGCAATGGCTGGAAAGGAAGTTCGGGAATACACCAATCTCTCCGACCCAAAAGACAAGAAGTGGGGTAAAGGGAAGGATAAGATAGACGATGAAGATATCACTTTTCAACGAATGGTTGCGAAGATGCAAGAGGTTGCAGGAGAACGTGGTGGTTACCTTCATGGACGTGGCGCTGCTAGTTTAGCTGATTCTGCACCTGCATCTGTTCCCTTGGCTCTTCGTGTGGAGCCAAAGCCAAAGAGTGGAATTAGGCAGCAGGATCTCCTGAAAAGGGTAGTTGAAGTGAAACGGAAAAGGCCCAGAGTTTCAAGTCCAGCAGAGTTAGCAAATCCGAAGCATGAGAGTGAGAATGAAAAGGTGAAAGAGAAGAAGGCCTTATCATCAAAAACAGACAAAAGTGAAGGGGAGAAAGAAGCTGAAAATCCAGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGAAGAGGACGAATGA

Coding sequence (CDS)

ATGGCTGGAAAGGAAGTTCGGGAATACACCAATCTCTCCGACCCAAAAGACAAGAAGTGGGGTAAAGGGAAGGATAAGATAGACGATGAAGATATCACTTTTCAACGAATGGTTGCGAAGATGCAAGAGGTTGCAGGAGAACGTGGTGGTTACCTTCATGGACGTGGCGCTGCTAGTTTAGCTGATTCTGCACCTGCATCTGTTCCCTTGGCTCTTCGTGTGGAGCCAAAGCCAAAGAGTGGAATTAGGCAGCAGGATCTCCTGAAAAGGGTAGTTGAAGTGAAACGGAAAAGGCCCAGAGTTTCAAGTCCAGCAGAGTTAGCAAATCCGAAGCATGAGAGTGAGAATGAAAAGGTGAAAGAGAAGAAGGCCTTATCATCAAAAACAGACAAAAGTGAAGGGGAGAAAGAAGCTGAAAATCCAGTGAAGAGTTTACTAGGTTTGGCATATGCTAGTTCTGATGAAGAGGACGAATGA

Protein sequence

MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGAASLADSAPASVPLALRVEPKPKSGIRQQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVKSLLGLAYASSDEEDE

Homology

[Close]

BLAST of Carg21660 vs. NCBI nr
Match: XP_022949335.1 (uncharacterized protein LOC111452720 [Cucurbita moschata] >XP_023524672.1 uncharacterized protein LOC111788548 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.6 bits (701), Expect = 2.1e-70
Identity = 157/195 (80.51%), Postives = 157/195 (80.51%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 180

[Close]

BLAST of Carg21660 vs. NCBI nr
Match: XP_022998283.1 (uncharacterized protein LOC111492966 [Cucurbita maxima])

HSP 1 Score: 271.6 bits (693), Expect = 1.7e-69
Identity = 155/195 (79.49%), Postives = 156/195 (80.00%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVSSPAEL+NPKHESENEKVKEKKAL SKTDKSEGEKEAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSSPAELSNPKHESENEKVKEKKALPSKTDKSEGEKEAENPVK 180

[Close]

BLAST of Carg21660 vs. NCBI nr
Match: XP_004137399.1 (PREDICTED: uncharacterized protein LOC101214943 [Cucumis sativus] >KGN63978.1 hypothetical protein Csa_1G032480 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 138/195 (70.77%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVS+ A+L+NPKH+++NEKVKEK  +  KT+K+EGE EAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKPLV--KTNKTEGETEAENPVK 180

[Close]

BLAST of Carg21660 vs. NCBI nr
Match: XP_008439948.1 (PREDICTED: uncharacterized protein LOC103484557 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 9.6e-60
Identity = 138/195 (70.77%), Postives = 149/195 (76.41%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVS+ ++L+NPKH++ N+KVKE   +  KT+K+EGE EAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLV--KTNKTEGETEAENPVK 180

[Close]

BLAST of Carg21660 vs. NCBI nr
Match: XP_022137528.1 (uncharacterized protein LOC111008953 isoform X1 [Momordica charantia])

HSP 1 Score: 227.3 bits (578), Expect = 3.8e-56
Identity = 136/195 (69.74%), Postives = 143/195 (73.33%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVS    L+N K + ++E  KE     SKT+KSEGEKEAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSGQGALSNSKVDVDHENGKETPL--SKTNKSEGEKEAENPVK 180

[Close]

BLAST of Carg21660 vs. TAIR10
Match: AT1G73350.2 (unknown protein)

HSP 1 Score: 162.5 bits (410), Expect = 2.1e-40
Identity = 108/212 (50.94%), Postives = 126/212 (59.43%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAG+EV+EYTNLSDPKDKK GKG  KIDDED+TFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGREVKEYTNLSDPKDKKSGKG--KIDDEDVTFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AA+ ADS+PAS+PL LRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAATQADSSPASIPLPLRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSP-----------------AELANPKHESENEKVKEKKALS 158
           QQDLL++VVEVK KRP++S+P                 A++   K + E   V +K    
Sbjct: 121 QQDLLRKVVEVKPKRPKISTPSSPSLSPPVRSDRGPTEAKVHRDKQKEEAMPVLKKPGAD 180

[Close]

BLAST of Carg21660 vs. TrEMBL
Match: tr|A0A0A0LQC3|A0A0A0LQC3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032480 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.7e-60
Identity = 138/195 (70.77%), Postives = 151/195 (77.44%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVS+ A+L+NPKH+++NEKVKEK  +  KT+K+EGE EAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSNQADLSNPKHDNDNEKVKEKPLV--KTNKTEGETEAENPVK 180

[Close]

BLAST of Carg21660 vs. TrEMBL
Match: tr|A0A1S3B0L6|A0A1S3B0L6_CUCME (uncharacterized protein LOC103484557 OS=Cucumis melo OX=3656 GN=LOC103484557 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 6.3e-60
Identity = 138/195 (70.77%), Postives = 149/195 (76.41%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADSAPASVPLALRVEPKPKSGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSAPASVPLALRVEPKPKSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKHESENEKVKEKKALSSKTDKSEGEKEAENPVK 159
           QQDLLKRVVEVK KRPRVS+ ++L+NPKH++ N+KVKE   +  KT+K+EGE EAENPVK
Sbjct: 121 QQDLLKRVVEVKPKRPRVSNLSDLSNPKHDNNNDKVKENPLV--KTNKTEGETEAENPVK 180

[Close]

BLAST of Carg21660 vs. TrEMBL
Match: tr|V4T3G7|V4T3G7_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10024397mg PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.3e-49
Identity = 125/221 (56.56%), Postives = 142/221 (64.25%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAG+EVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 24  MAGREVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 83

Query: 61  --------------------------------------------------AASLADSAPA 120
                                                             AASLADS+PA
Sbjct: 84  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFLFYMLYFCSLTNGYKAASLADSSPA 143

Query: 121 SVPLALRVEPKPKSGIRQQDLLKRVVEVKRKRPRVSSPAELANPKHESEN---------- 158
           SVPL LRVEPKP+SGIRQQDLLK+V+EVK K+PRVS+P++   PK  S N          
Sbjct: 144 SVPLPLRVEPKPRSGIRQQDLLKKVLEVKPKKPRVSTPSDGNQPKAISSNSAANNIKPEV 203

[Close]

BLAST of Carg21660 vs. TrEMBL
Match: tr|A0A2H5QU39|A0A2H5QU39_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_261840 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.6e-49
Identity = 124/221 (56.11%), Postives = 141/221 (63.80%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAG+EVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 24  MAGREVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 83

Query: 61  --------------------------------------------------AASLADSAPA 120
                                                             AASLADS+PA
Sbjct: 84  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKISFLFYMLYFCSLTNGYKAASLADSSPA 143

Query: 121 SVPLALRVEPKPKSGIRQQDLLKRVVEVKRKRPRVSSPAELANPKHESEN---------- 158
           SVPL LRVEPKP+SGIRQQDLLK+V+EVK K+PRVS+P++   PK  S N          
Sbjct: 144 SVPLPLRVEPKPRSGIRQQDLLKKVLEVKPKKPRVSTPSDGNQPKAISSNSAANNIKPEV 203

[Close]

BLAST of Carg21660 vs. TrEMBL
Match: tr|A0A067ELM5|A0A067ELM5_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028797mg PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 5.6e-48
Identity = 121/204 (59.31%), Postives = 139/204 (68.14%), Query Frame = 0


Query: 1   MAGKEVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG---- 60
           MAG+EVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRG    
Sbjct: 1   MAGREVREYTNLSDPKDKKWGKGKDKIDDEDITFQRMVAKMQEVAGERGGYLHGRGALDS 60

Query: 61  ---------------------------------AASLADSAPASVPLALRVEPKPKSGIR 120
                                            AASLADS+PA  PL LRVEPKP+SGIR
Sbjct: 61  DDLLYLKEQMEAEEDAERLLRRTEKRAFAAFKKAASLADSSPA-FPLPLRVEPKPRSGIR 120

Query: 121 QQDLLKRVVEVKRKRPRVSSPAELANPKH----------ESENEKVKEKKALSSKTDKSE 158
           QQDLLK+V+EVK K+PRVS+P++   PK           + E ++ K+K+  +SK+DK  
Sbjct: 121 QQDLLKKVLEVKPKKPRVSTPSDGNQPKAIFSNSAANNIKPEVDQAKKKEQTTSKSDKPG 180

The following BLAST results are available for this feature:

BLAST of Carg21660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022949335.1	2.1e-70	80.51	uncharacterized protein LOC111452720 [Cucurbita moschata] >XP_023524672.1 unchar...	[more]
XP_022998283.1	1.7e-69	79.49	uncharacterized protein LOC111492966 [Cucurbita maxima]	[more]
XP_004137399.1	2.5e-60	70.77	PREDICTED: uncharacterized protein LOC101214943 [Cucumis sativus] >KGN63978.1 hy...	[more]
XP_008439948.1	9.6e-60	70.77	PREDICTED: uncharacterized protein LOC103484557 [Cucumis melo]	[more]
XP_022137528.1	3.8e-56	69.74	uncharacterized protein LOC111008953 isoform X1 [Momordica charantia]	[more]

BLAST of Carg21660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73350.2	2.1e-40	50.94	unknown protein	[more]

BLAST of Carg21660 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg21660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQC3\|A0A0A0LQC3_CUCSA	1.7e-60	70.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032480 PE=4 SV=1	[more]
tr\|A0A1S3B0L6\|A0A1S3B0L6_CUCME	6.3e-60	70.77	uncharacterized protein LOC103484557 OS=Cucumis melo OX=3656 GN=LOC103484557 PE=...	[more]
tr\|V4T3G7\|V4T3G7_9ROSI	2.3e-49	56.56	Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10024...	[more]
tr\|A0A2H5QU39\|A0A2H5QU39_CITUN	6.6e-49	56.11	Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_261840 PE=4...	[more]
tr\|A0A067ELM5\|A0A067ELM5_CITSI	5.6e-48	59.31	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028797mg PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21660-RA	Carg21660-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 154..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..140
None	No IPR available	PANTHER	PTHR37202	FAMILY NOT NAMED	coord: 57..157 coord: 1..57

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21660	Cla018628	Watermelon (97103) v1	carwmB0055
Carg21660	Csa1G032480	Cucumber (Chinese Long) v2	carcuB0052
Carg21660	MELO3C001966	Melon (DHL92) v3.5.1	carmeB0053
Carg21660	ClCG04G012440	Watermelon (Charleston Gray)	carwcgB0054
Carg21660	CSPI01G05400	Wild cucumber (PI 183967)	carcpiB0056
Carg21660	Cucsa.112560	Cucumber (Gy14) v1	carcgyB0060
Carg21660	CmaCh01G007750	Cucurbita maxima (Rimu)	carcmaB0067
Carg21660	CmoCh01G008150	Cucurbita moschata (Rifu)	carcmoB0070
Carg21660	Lsi02G000540	Bottle gourd (USVL1VR-Ls)	carlsiB047
Carg21660	Cp4.1LG02g10230	Cucurbita pepo (Zucchini)	carcpeB0073
Carg21660	CsGy1G005150	Cucumber (Gy14) v2	carcgybB0052
Carg21660	MELO3C001966.2	Melon (DHL92) v3.6.1	carmedB0054
Carg21660	CsaV3_1G005260	Cucumber (Chinese Long) v3	carcucB0058
Carg21660	Cla97C04G079430	Watermelon (97103) v2	carwmbB0051
Carg21660	Bhi08G001635	Wax gourd	carwgoB0060

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None