ClCG03G016440 (gene) Watermelon (Charleston Gray)

BLAST of ClCG03G016440 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 8.0e-110
Identity = 220/619 (35.54%), Postives = 349/619 (56.38%), Query Frame = 1

Query: 68  DQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMS 127
           D  L +KL   Y+  G L+ A +VFD     K L  N ++N   ++  ++ SI L K M 
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187

Query: 128 RCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIM 187
              +E DSYT +   K+  SL     G ++    +  G      +G+S++ F +K   + 
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247

Query: 188 SAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCG 247
           SA+  F +M E+DV+ WN +I G++  GL  +G +VF+ ML + IE    T+  +   C 
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307

Query: 248 EMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNV 307
           + R +  G+ +HS  +    S + R   +L+DMY K GD++SA+ +F  M  R++VS+  
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367

Query: 308 MISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRG 367
           MI+GY + G   E + LF  +       D  T  +++  C+R   LD GK +H  I    
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427

Query: 368 LDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLF- 427
           L  ++ +S A++D+YAKCGS+  A  VF  M+ K++ISW  ++ G ++N +A +AL LF 
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487

Query: 428 YRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKC 487
             ++ +R + +  T+  ++  CA L    +GR +H  + R  + S+  V  +L+DMYAKC
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547

Query: 488 SKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSL 547
             +  A  +F      KD++ +  MI+GYGMHG G++A+ +++QM   G++ +E +FVSL
Sbjct: 548 GALLLAHMLFD-DIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 607

Query: 548 LSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIP 607
           L ACSHSGLV+EG   F  M  +  + PT + YAC VD+L R G L +A   I  MP  P
Sbjct: 608 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 667

Query: 608 TSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRG 667
            + I   LL GC +H D++L  K A+++  LE  N   Y+ ++NIYAEA +W+ VK +R 
Sbjct: 668 DATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 727

Query: 668 LMTEQELKKIPGYSSIEVK 686
            + ++ L+K PG S IE+K
Sbjct: 728 RIGQRGLRKNPGCSWIEIK 745

HSP 2 Score: 218.0 bits (554), Expect = 3.3e-55
Identity = 129/457 (28.23%), Postives = 231/457 (50.55%), Query Frame = 1

Query: 104 NAMVNGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVC 163
           N  +  + ++ +  ++++LL +  + D+  D  T    L+ C      + G EV      
Sbjct: 65  NTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRG 124

Query: 164 RGLARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNV 223
            G      LGS +       GD+  A   F ++  +  + WN+++    + G FS    +
Sbjct: 125 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 184

Query: 224 FLDMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCK 283
           F  M+ + +E  + T + + +S   +R++  G+ +H ++L  G      V  SL+  Y K
Sbjct: 185 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 244

Query: 284 SGDVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSL 343
           +  V+SAR +FD M  R+++SWN +I+GYV NG   + L +F  ++++    D  T VS+
Sbjct: 245 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 304

Query: 344 IQLCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNV 403
              C+ +  +  G+ +H    +            ++D+Y+KCG L  A +VF  M +++V
Sbjct: 305 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 364

Query: 404 ISWTAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAI 463
           +S+T+M+ G A+ G A +A+KLF  M+ E ++ +  T+ +++ CCA   LL EG+ VH  
Sbjct: 365 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 424

Query: 464 LTRFHFASEVVVITALIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRK 523
           +       ++ V  AL+DMYAKC  +  AE VF      KD+I +N +I GY  +    +
Sbjct: 425 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS-EMRVKDIISWNTIIGGYSKNCYANE 484

Query: 524 ALCVYHQMNLE-GLQPNESTFVSLLSACSHSGLVEEG 560
           AL +++ +  E    P+E T   +L AC+     ++G
Sbjct: 485 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518

HSP 3 Score: 117.9 bits (294), Expect = 4.6e-25
Identity = 78/303 (25.74%), Postives = 148/303 (48.84%), Query Frame = 1

Query: 300 RNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVL 359
           R++   N  +  + ++G L   + L  + V      D  T  S++QLC+ +  L  GK +
Sbjct: 59  RSVTDANTQLRRFCESGNLENAVKL--LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEV 118

Query: 360 HGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHA 419
              I   G  ++  L + +  +Y  CG L  AS VF+ +K +  + W  ++  LA++G  
Sbjct: 119 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 178

Query: 420 RDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITAL 479
             ++ LF +M +  V  ++ T   + +  + L  +  G  +H  + +  F     V  +L
Sbjct: 179 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 238

Query: 480 IDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPN 539
           +  Y K  +++SA KVF    T +DVI +N++I+GY  +GL  K L V+ QM + G++ +
Sbjct: 239 VAFYLKNQRVDSARKVFDE-MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 298

Query: 540 ESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELI 599
            +T VS+ + C+ S L+  G ++  ++      +  D+     +D+  + G L  A+ + 
Sbjct: 299 LATIVSVFAGCADSRLISLGRAV-HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 357

Query: 600 NQM 603
            +M
Sbjct: 359 REM 357

BLAST of ClCG03G016440 vs. Swiss-Prot
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-108
Identity = 227/672 (33.78%), Postives = 366/672 (54.46%), Query Frame = 1

Query: 25  NNALFNPQPNLQPFFSFLQEFP--HNILSVKSIHAQIIITNAISGDQILVAKLVQAYSGL 84
           NNAL     +++ + S L  F    +I   K++H  +I    +SG   +++ L   Y+  
Sbjct: 9   NNAL----SSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGH--ILSTLSVTYALC 68

Query: 85  GCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIEL-LKMMSR-CDLEFDSYTCNF 144
           G +  ARK+F+  PQ   L  N ++  Y++   Y+D+I + ++M+S       D YT  F
Sbjct: 69  GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 128

Query: 145 ALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKD 204
             KA   L   ++G+ V    +     R +++ +++L   +  G +  A+  F  M  +D
Sbjct: 129 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 188

Query: 205 VVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHS 264
           V+ WN MI G+ + G  ++   +F  M+   ++    T+  ++  CG +++L+ G+ +H 
Sbjct: 189 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 248

Query: 265 YVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVE 324
            V    +     V  +L++MY K G ++ AR++FD M  R++++W  MI+GY ++G +  
Sbjct: 249 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVEN 308

Query: 325 TLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVD 384
            L L R++       ++ T  SL+ +C     ++ GK LHG   R+ +  ++++ T+++ 
Sbjct: 309 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 368

Query: 385 LYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFYRMQNERVTFNALT 444
           +YAKC  +     VF      +   W+A++ G  QN    DAL LF RM+ E V  N  T
Sbjct: 369 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 428

Query: 445 LVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCSKINSAEKVF---K 504
           L SL+   A L  LR+   +H  LT+  F S +   T L+ +Y+KC  + SA K+F   +
Sbjct: 429 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 488

Query: 505 YGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSLLSACSHSGLVE 564
                KDV+L+ A+ISGYGMHG G  AL V+ +M   G+ PNE TF S L+ACSHSGLVE
Sbjct: 489 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVE 548

Query: 565 EGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIPTSGILETLLNG 624
           EG++LF+ M + +        Y C VDLL RAGRL +A  LI  +PF PTS +   LL  
Sbjct: 549 EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 608

Query: 625 CLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRGLMTEQELKKIP 684
           C+ H++++LG   A++L  LE  N   Y+ L+NIYA   RW  ++ VR +M    L+K P
Sbjct: 609 CVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKP 668

Query: 685 GYSSIEVKIQSV 690
           G+S+IE++  SV
Sbjct: 669 GHSTIEIRSNSV 674

BLAST of ClCG03G016440 vs. Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.4e-106
Identity = 205/618 (33.17%), Postives = 347/618 (56.15%), Query Frame = 1

Query: 68  DQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMS 127
           ++ + + L++AY   G ++   K+FD   Q   ++ N M+NGY +    +  I+   +M 
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231

Query: 128 RCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIM 187
              +  ++ T +  L  C S L  ++G+++  L V  G+     + +S+L+   K G   
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291

Query: 188 SAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCG 247
            A   F  M   D V WN MI G++Q GL  E    F +M+ + + P A+T + L+ S  
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351

Query: 248 EMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNV 307
           +  NL++ K IH Y++   +S D  + ++LID Y K   V  A+ IF      ++V +  
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411

Query: 308 MISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRG 367
           MISGY+ NG  +++L +FR LV      +  T VS++ +      L  G+ LHG I ++G
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471

Query: 368 LDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFY 427
            D    +  A++D+YAKCG +  A  +FER+  ++++SW +M+   AQ+ +   A+ +F 
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531

Query: 428 RMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCS 487
           +M    + ++ +++ + +  CA L     G+ +H  + +   AS+V   + LIDMYAKC 
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591

Query: 488 KINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQM-NLEGLQPNESTFVSL 547
            + +A  VFK     K+++ +N++I+  G HG  + +LC++H+M    G++P++ TF+ +
Sbjct: 592 NLKAAMNVFK-TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 651

Query: 548 LSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIP 607
           +S+C H G V+EG+  F++M +D+ + P  + YAC VDL  RAGRL +A E +  MPF P
Sbjct: 652 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 711

Query: 608 TSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRG 667
            +G+  TLL  C LHK++EL    + +L+ L+  N   Y+ +SN +A A  W+ V  VR 
Sbjct: 712 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 771

Query: 668 LMTEQELKKIPGYSSIEV 685
           LM E+E++KIPGYS IE+
Sbjct: 772 LMKEREVQKIPGYSWIEI 788

HSP 2 Score: 231.5 bits (589), Expect = 2.9e-59
Identity = 159/606 (26.24%), Postives = 305/606 (50.33%), Query Frame = 1

Query: 46  PHNILSVKSIHAQIIITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLL--C 105
           P+ +   K +HA +I+ N+ISGD     +++  Y+  G   +  K+F      ++ +   
Sbjct: 48  PNLLRQGKQVHAFLIV-NSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPW 107

Query: 106 NAMVNGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVC 165
           N++++ +++N   N ++     M    +  D  T    +KAC++L +++ G++ +   V 
Sbjct: 108 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTVS 167

Query: 166 R-GLARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYN 225
             G+    F+ SS++   ++ G I      F ++++KD V WNVM+ G+ + G       
Sbjct: 168 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 227

Query: 226 VFLDMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYC 285
            F  M  ++I P+AVT   ++  C     +  G  +H  V+  G+  +  +  SL+ MY 
Sbjct: 228 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 287

Query: 286 KSGDVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVS 345
           K G  + A  +F MM   + V+WN MISGYVQ+G + E+L  F  ++ +    D+ T  S
Sbjct: 288 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 347

Query: 346 LIQLCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKN 405
           L+   S+  +L+  K +H  I R  + L++ L++A++D Y KC  ++ A ++F +  + +
Sbjct: 348 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 407

Query: 406 VISWTAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHA 465
           V+ +TAM+ G   NG   D+L++F  +   +++ N +TLVS++    +L  L+ GR +H 
Sbjct: 408 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 467

Query: 466 ILTRFHFASEVVVITALIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGR 525
            + +  F +   +  A+IDMYAKC ++N A ++F+   + +D++ +N+MI+         
Sbjct: 468 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE-RLSKRDIVSWNSMITRCAQSDNPS 527

Query: 526 KALCVYHQMNLEGLQPNESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACF 585
            A+ ++ QM + G+  +  +  + LSAC++      G ++   M K H +       +  
Sbjct: 528 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTL 587

Query: 586 VDLLCRAGRLRQAEELINQMP---FIPTSGILETLLNG-------CLLHKDIELGVKFAD 639
           +D+  + G L+ A  +   M     +  + I+    N        CL H+ +E      D
Sbjct: 588 IDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 647

BLAST of ClCG03G016440 vs. Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.3e-104
Identity = 226/639 (35.37%), Postives = 349/639 (54.62%), Query Frame = 1

Query: 48  NILSVKSIHAQIIITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMV 107
           NI S++  H  ++  N + GD  +  KLV  Y   G  ++AR VFD  P+P   L   M+
Sbjct: 56  NIDSLRQSHG-VLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVML 115

Query: 108 NGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLA 167
             Y  N+   + ++L  ++ +    +D    + ALKAC  L D + G + I   + +  +
Sbjct: 116 RCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK-IHCQLVKVPS 175

Query: 168 RGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDM 227
               + + +L+   K G+I SA   F+ +  ++VVCW  MI G+++  L  EG  +F  M
Sbjct: 176 FDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM 235

Query: 228 LYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDV 287
             N +  +  T   LI +C ++  L  GK  H  ++  G+   + ++TSL+DMY K GD+
Sbjct: 236 RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 295

Query: 288 ESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLC 347
            +AR +F+     +LV W  MI GY  NG + E L LF+ +   +   +  T  S++  C
Sbjct: 296 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 355

Query: 348 SRTADLDGGKVLHGCIYRRGL-DLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISW 407
               +L+ G+ +HG   + G+ D N+  + A+V +YAKC     A  VFE    K++++W
Sbjct: 356 GLIENLELGRSVHGLSIKVGIWDTNV--ANALVHMYAKCYQNRDAKYVFEMESEKDIVAW 415

Query: 408 TAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTR 467
            +++ G +QNG   +AL LF+RM +E VT N +T+ SL   CA LG L  G  +HA   +
Sbjct: 416 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 475

Query: 468 FHF--ASEVVVITALIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKA 527
             F  +S V V TAL+D YAKC    SA  +F      K+ I ++AMI GYG  G    +
Sbjct: 476 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT-IEEKNTITWSAMIGGYGKQGDTIGS 535

Query: 528 LCVYHQMNLEGLQPNESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVD 587
           L ++ +M  +  +PNESTF S+LSAC H+G+V EG   F +M KD++ TP+ K Y C VD
Sbjct: 536 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVD 595

Query: 588 LLCRAGRLRQAEELINQMPFIPTSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSI 647
           +L RAG L QA ++I +MP  P        L+GC +H   +LG     ++L L   + S 
Sbjct: 596 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASY 655

Query: 648 YITLSNIYAEASRWDLVKYVRGLMTEQELKKIPGYSSIE 684
           Y+ +SN+YA   RW+  K VR LM ++ L KI G+S++E
Sbjct: 656 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689

HSP 2 Score: 92.4 bits (228), Expect = 2.1e-17
Identity = 72/298 (24.16%), Postives = 133/298 (44.63%), Query Frame = 1

Query: 16  ISHTSKSSINNAL--------FNPQPNLQPFFSFLQE--FPHNILSVKSIHAQIIITNAI 75
           + +T   S+N AL           +PN     S L       N+   +S+H   I     
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI- 375

Query: 76  SGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKM 135
             D  +   LV  Y+      +A+ VF+   +   +  N++++G+ QN   ++++ L   
Sbjct: 376 -WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR 435

Query: 136 MSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGR--FLGSSILNFLVKT 195
           M+   +  +  T      AC SL    +G  +   +V  G        +G+++L+F  K 
Sbjct: 436 MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKC 495

Query: 196 GDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILI 255
           GD  SA+  F  + EK+ + W+ MIGG+ ++G       +F +ML  + +P+  T T ++
Sbjct: 496 GDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSIL 555

Query: 256 QSCGEMRNLKFG-KCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLR 301
            +CG    +  G K   S    +  +  T+  T ++DM  ++G++E A  I + MP++
Sbjct: 556 SACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611

BLAST of ClCG03G016440 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.5e-104
Identity = 203/627 (32.38%), Postives = 332/627 (52.95%), Query Frame = 1

Query: 59  IIITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYND 118
           ++  N +  +     KLV  +   G ++ A +VF+       +L + M+ G+ +    + 
Sbjct: 59  LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118

Query: 119 SIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILN 178
           +++    M   D+E   Y   + LK C    +  +G E+  L V  G +   F  + + N
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178

Query: 179 FLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVT 238
              K   +  A+  F +M E+D+V WN ++ G+ Q G+      +   M    ++PS +T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238

Query: 239 MTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMP 298
           +  ++ +   +R +  GK IH Y +  G  S   + T+L+DMY K G +E+AR +FD M 
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298

Query: 299 LRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKV 358
            RN+VSWN MI  YVQN    E + +F+ ++         + +  +  C+   DL+ G+ 
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 359 LHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGH 418
           +H      GLD N+ +  +++ +Y KC  +  A+S+F +++++ ++SW AM++G AQNG 
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 419 ARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITA 478
             DAL  F +M++  V  +  T VS++   A L +    + +H ++ R      V V TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478

Query: 479 LIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQP 538
           L+DMYAKC  I  A  +F    + + V  +NAMI GYG HG G+ AL ++ +M    ++P
Sbjct: 479 LVDMYAKCGAIMIARLIFDM-MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 538

Query: 539 NESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEEL 598
           N  TF+S++SACSHSGLVE G+  F  M++++ +  +   Y   VDLL RAGRL +A + 
Sbjct: 539 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 598

Query: 599 INQMPFIPTSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRW 658
           I QMP  P   +   +L  C +HK++    K A+RL  L   +   ++ L+NIY  AS W
Sbjct: 599 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 658

Query: 659 DLVKYVRGLMTEQELKKIPGYSSIEVK 686
           + V  VR  M  Q L+K PG S +E+K
Sbjct: 659 EKVGQVRVSMLRQGLRKTPGCSMVEIK 684

BLAST of ClCG03G016440 vs. TrEMBL
Match: A0A0A0LYM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573630 PE=4 SV=1)

HSP 1 Score: 1042.7 bits (2695), Expect = 2.0e-301
Identity = 522/587 (88.93%), Postives = 543/587 (92.50%), Query Frame = 1

Query: 106 MVNGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRG 165
           MVNGYLQNE YND IELLKMMSRC LEFDSYTCNFALKACM LLDYEMGMEVI LAVC+G
Sbjct: 1   MVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKG 60

Query: 166 LARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFL 225
           LA GRFLGSSILNFLVKTGDIM AQFFFHQMVEKDVVCWNVMIGGFMQEGLF EGYN+FL
Sbjct: 61  LAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFL 120

Query: 226 DMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSG 285
           DMLYNKIEPSAVTM  LIQSCGEMRNL FGKC+H +VLGFGMS DTRVLT+LIDMYCKSG
Sbjct: 121 DMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSG 180

Query: 286 DVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQ 345
           DVESARWIF+ MP RNLVSWNVMISGYVQNG LVETL LF+ L+M+D GFDSGT VSLIQ
Sbjct: 181 DVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQ 240

Query: 346 LCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVIS 405
           LCSRTADLDGGK+LHG IYRRGLDLNLVL TAIVDLYAKCGSLAYASSVFERMKNKNVIS
Sbjct: 241 LCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVIS 300

Query: 406 WTAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILT 465
           WTAMLVGLAQNGHARDALKLF +MQNERVTFNALTLVSLV CC LLGLLREGR VHA LT
Sbjct: 301 WTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLT 360

Query: 466 RFHFASEVVVITALIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKAL 525
           RFHFASEVVV+TALIDMYAKCSKINSAE VFKYG TPKDVILYN+MISGYGMHGLG KAL
Sbjct: 361 RFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKAL 420

Query: 526 CVYHQMNLEGLQPNESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDL 585
           CVYH+MN EGLQPNESTFVSLLSACSHSGLVEEGI+LFQNM KDH+ TPTDKLYAC VDL
Sbjct: 421 CVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDL 480

Query: 586 LCRAGRLRQAEELINQMPFIPTSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIY 645
           L RAGRLRQAEELINQMPF PTSGILETLLNGCLLHKDIELGVK ADRLLSLESRNPSIY
Sbjct: 481 LSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIY 540

Query: 646 ITLSNIYAEASRWDLVKYVRGLMTEQELKKIPGYSSIEVKIQSVCSV 693
           ITLSNIYA+ASRWD VKYVRGLM EQE+KKIPGYSSIE +  ++  V
Sbjct: 541 ITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEGEFAAMLGV 587

BLAST of ClCG03G016440 vs. TrEMBL
Match: A0A0A0LYM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573630 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 119/463 (25.70%), Postives = 235/463 (50.76%), Query Frame = 1

Query: 59  IIITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYND 118
           + +   ++G + L + ++      G +  A+  F    +   +  N M+ G++Q   + +
Sbjct: 55  LAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFRE 114

Query: 119 SIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILN 178
              L   M    +E  + T    +++C  + +   G  +    +  G++R   + +++++
Sbjct: 115 GYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLID 174

Query: 179 FLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVT 238
              K+GD+ SA++ F  M  +++V WNVMI G++Q GL  E   +F  ++ + +   + T
Sbjct: 175 MYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGT 234

Query: 239 MTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMP 298
           +  LIQ C    +L  GK +H ++   G+  +  + T+++D+Y K G +  A  +F+ M 
Sbjct: 235 VVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMK 294

Query: 299 LRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKV 358
            +N++SW  M+ G  QNG   + L LF  +      F++ T VSL+  C+    L  G+ 
Sbjct: 295 NKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRS 354

Query: 359 LHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFE-RMKNKNVISWTAMLVGLAQNG 418
           +H  + R      +V+ TA++D+YAKC  +  A  VF+  +  K+VI + +M+ G   +G
Sbjct: 355 VHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHG 414

Query: 419 HARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVIT 478
               AL +++RM  E +  N  T VSL+  C+  GL+ EG  +   + + H  +    + 
Sbjct: 415 LGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLY 474

Query: 479 A-LIDMYAKCSKINSAEKVF-KYGFTPKDVILYNAMISGYGMH 519
           A ++D+ ++  ++  AE++  +  FTP   IL   +++G  +H
Sbjct: 475 ACIVDLLSRAGRLRQAEELINQMPFTPTSGIL-ETLLNGCLLH 516

HSP 2 Score: 780.0 bits (2013), Expect = 2.4e-222
Identity = 392/672 (58.33%), Postives = 510/672 (75.89%), Query Frame = 1

Query: 14  RFISHTSKSSINNALFNPQP-NLQPFFSFLQEFPHNILSVKSIHAQIIITNAISGDQILV 73
           +F+S  S SSI NA FN  P ++Q F S L EF + +LSVKSIHAQII TN++S  Q L 
Sbjct: 18  KFLSLHSFSSIKNANFNHLPLDIQRFLSLLHEFSNTLLSVKSIHAQII-TNSVSKHQFLS 77

Query: 74  AKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMSRCDLE 133
           + LV++YS LGCL  ARKVFD  PQPK +LCN+M+NGYL+N+ Y ++IEL ++M   D  
Sbjct: 78  SNLVRSYSELGCLGLARKVFDKIPQPKPILCNSMLNGYLRNQCYKETIELFELMGASDWG 137

Query: 134 FDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIMSAQFF 193
           FDSY+CNF LKACM L DYE G E+I+ AV   +   +FLGSS++NF +K GD  SA+  
Sbjct: 138 FDSYSCNFVLKACMELEDYERGTEIIKRAVDHRVDGDKFLGSSMINFFMKFGDFNSARRV 197

Query: 194 FHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCGEMRNL 253
           F+QM+ +DVVCWN MIGG+++   +   +++FL+M+   + PSA+TM  L+Q+CG MR+L
Sbjct: 198 FNQMISRDVVCWNSMIGGYVKGCYYVAAFDLFLEMILCGVRPSAITMVSLVQACGGMRDL 257

Query: 254 KFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNVMISGY 313
           + GK +H  VL FG+ +D  V T+LIDMY K G+ E AR +FD+MP + LVSWNV+ISGY
Sbjct: 258 ELGKRVHGLVLVFGLGTDVLVHTALIDMYSKLGEHERARSVFDIMPAKTLVSWNVIISGY 317

Query: 314 VQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRGLDLNL 373
           VQN  + E  YLF+ LV+  GGFDSGT +SL+Q C++ ADL+ GKVLHG I+R+GLD+N+
Sbjct: 318 VQNCLVYEAFYLFQKLVLTGGGFDSGTIISLLQSCAQVADLESGKVLHGYIFRKGLDINV 377

Query: 374 VLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFYRMQNE 433
           +L TA+VDLY+KCG+L  A+ +F+RMKN+NVI+WTAMLVGLAQNGHA DA++LF +MQ E
Sbjct: 378 ILCTALVDLYSKCGALKEATFMFDRMKNRNVITWTAMLVGLAQNGHAEDAIRLFGKMQEE 437

Query: 434 RVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCSKINSA 493
            VT N+ TLVSLV CCA LG L++GR VHA L R+ +A +VV  TALIDMYAKC  IN A
Sbjct: 438 GVTANSTTLVSLVHCCAHLGSLKKGRSVHARLLRYGYAFDVVNRTALIDMYAKCGNINYA 497

Query: 494 EKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSLLSACSH 553
           E+VF+     KDVI +N+MI+GYGMHG G KAL +Y +M  EGL+PN++TFVSLLSACSH
Sbjct: 498 ERVFEDVSFFKDVISWNSMITGYGMHGQGHKALDLYRRMLEEGLKPNKTTFVSLLSACSH 557

Query: 554 SGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIPTSGILE 613
           SGLV++G SLF +ME DH++   +K YAC+VDLL RAG +++AE LI QMPF  +  + E
Sbjct: 558 SGLVDQGRSLFLSMESDHNIRANEKHYACYVDLLSRAGHIKEAEVLIKQMPFQSSREVFE 617

Query: 614 TLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRGLMTEQE 673
            LLNGC +HK+I++G+K AD LLSL++ NP IYI LSNIYAEA RWD V ++RGLM  + 
Sbjct: 618 ALLNGCRMHKNIDIGIKAADYLLSLDATNPGIYIMLSNIYAEARRWDAVDHIRGLMRGRG 677

Query: 674 LKKIPGYSSIEV 685
           LKK PGYS IEV
Sbjct: 678 LKKTPGYSLIEV 688

BLAST of ClCG03G016440 vs. TrEMBL
Match: A0A061F2D9_THECC (Pentatricopeptide repeat superfamily protein OS=Theobroma cacao GN=TCM_026441 PE=4 SV=1)

HSP 1 Score: 777.3 bits (2006), Expect = 1.6e-221
Identity = 386/672 (57.44%), Postives = 507/672 (75.45%), Query Frame = 1

Query: 14  RFISHTSKSSINNALFNPQ-PNLQPFFSFLQEFPHNILSVKSIHAQIIITNAISGDQILV 73
           +F+S  S S+I NA FN   P    F   LQEFP+ +  +KSIHAQII TN+ S  Q L 
Sbjct: 18  KFLSLHSFSTIKNANFNQTFPCFNKFLLLLQEFPNTLFCIKSIHAQII-TNSESRHQFLA 77

Query: 74  AKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMSRCDLE 133
           + LV+ YSGLGCL  ARKVFD   QPK +LCN+M+NGYL+N+ Y +++EL + M    LE
Sbjct: 78  SNLVKGYSGLGCLAIARKVFDQISQPKPILCNSMLNGYLRNQCYKETVELFEFMGFLHLE 137

Query: 134 FDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIMSAQFF 193
           FDSY+CN+ LKACM L D+E G EV++ AV R +   RFLGSS+++F +K GD   A++ 
Sbjct: 138 FDSYSCNYVLKACMELEDFEKGKEVVQRAVDRRVDGDRFLGSSMISFFMKFGDFDGARWV 197

Query: 194 FHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCGEMRNL 253
           F++MV++DVVCWN MI G+++   + E   +F++M+   + PS +TM  L+Q+CG +R+L
Sbjct: 198 FNRMVDRDVVCWNSMISGYVKGCYYFEALGLFIEMILRGVRPSPITMVSLVQACGGLRSL 257

Query: 254 KFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNVMISGY 313
           + GKC+H +VLG GM SD  VLT+L+DMY K G++ESA  +FD +P +NLVSWNVMISGY
Sbjct: 258 ELGKCVHGFVLGLGMGSDILVLTALVDMYSKMGEIESAHLLFDSIPAKNLVSWNVMISGY 317

Query: 314 VQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRGLDLNL 373
           VQN  + ++  LFR LV+  G FDSGT +SL+Q C++ ADL+ GKVLHGCI+RRGLD+NL
Sbjct: 318 VQNCLVSKSFDLFRELVITGGDFDSGTIISLLQCCAQIADLESGKVLHGCIFRRGLDMNL 377

Query: 374 VLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFYRMQNE 433
           +LSTAIVDLY+KCG++  A+ VF+RMK++NVI+WTAMLVGLAQNG A DALKLF +MQ E
Sbjct: 378 ILSTAIVDLYSKCGAVKEATFVFDRMKDRNVITWTAMLVGLAQNGKAEDALKLFNQMQEE 437

Query: 434 RVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCSKINSA 493
            V  N++TLV LV  CA LG L++GR VHA L R  +  +VV  TALIDMYAKC KIN A
Sbjct: 438 GVAANSITLVGLVHSCAHLGSLKKGRSVHAQLFRHGYDFDVVNRTALIDMYAKCGKINYA 497

Query: 494 EKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSLLSACSH 553
           E+V + G   KDVIL+N+MI+GYGMHG G KAL ++ +M  EG++P+++TF+SLLSACSH
Sbjct: 498 ERVLRDGSFFKDVILWNSMITGYGMHGQGHKALDIFCRMLEEGVKPSQTTFISLLSACSH 557

Query: 554 SGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIPTSGILE 613
           SGLV +G SLF +ME DH++ PT+K YAC+VDLL RAGRL++AE LI QMPF  +  + E
Sbjct: 558 SGLVNQGRSLFVSMESDHNIRPTEKHYACYVDLLSRAGRLQEAEALIKQMPFQSSGAVFE 617

Query: 614 TLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRGLMTEQE 673
            LL+GC  HK+I++G+K AD LLSL++ NP IY+ LSNIYAEA RWD V ++RGLM ++ 
Sbjct: 618 ALLSGCRTHKNIDIGIKAADHLLSLDATNPGIYVMLSNIYAEARRWDAVDHIRGLMKKRG 677

Query: 674 LKKIPGYSSIEV 685
           LKK PGYS IEV
Sbjct: 678 LKKTPGYSLIEV 688

BLAST of ClCG03G016440 vs. TrEMBL
Match: I1ND66_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G013300 PE=4 SV=2)

HSP 1 Score: 737.3 bits (1902), Expect = 1.8e-209
Identity = 379/677 (55.98%), Postives = 489/677 (72.23%), Query Frame = 1

Query: 9   CSPLKRFISHTSKSSINNA-LFNPQPNLQPFFSFLQEFPHNILSVKSIHAQIIITNAISG 68
           C P+      ++  S+++A  FN  P++  F S L +F + ++ VKSIHAQII  N +S 
Sbjct: 21  CRPIYNAAPSSTFVSVHHAPFFNQAPSV--FSSLLHQFSNTLIHVKSIHAQII-KNWVST 80

Query: 69  DQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMS 128
           +  L AKL++ YS LG L +AR VFD    P+T +CNAM+ G+L+N+ + +   L +MM 
Sbjct: 81  ESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMG 140

Query: 129 RCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIM 188
            CD+E +SYTC FALKAC  LLD E+GME+IR AV RG     ++GSS++NFLVK G + 
Sbjct: 141 SCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLA 200

Query: 189 SAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCG 248
            AQ  F  M EKDVVCWN +IGG++Q+GLF E   +FL+M+   + PS VTM  L+++CG
Sbjct: 201 DAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACG 260

Query: 249 EMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNV 308
           +    K G C HSYVL  GM +D  VLTSL+DMY   GD  SA  +FD M  R+L+SWN 
Sbjct: 261 QSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNA 320

Query: 309 MISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRG 368
           MISGYVQNG + E+  LFR LV +  GFDSGT VSLI+ CS+T+DL+ G++LH CI R+ 
Sbjct: 321 MISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKE 380

Query: 369 LDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFY 428
           L+ +LVLSTAIVD+Y+KCG++  A+ VF RM  KNVI+WTAMLVGL+QNG+A DALKLF 
Sbjct: 381 LESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFC 440

Query: 429 RMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCS 488
           +MQ E+V  N++TLVSLV CCA LG L +GR VHA   R  +A + V+ +ALIDMYAKC 
Sbjct: 441 QMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCG 500

Query: 489 KINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSLL 548
           KI+SAEK+F   F  KDVIL N+MI GYGMHG GR AL VY +M  E L+PN++TFVSLL
Sbjct: 501 KIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLL 560

Query: 549 SACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIPT 608
           +ACSHSGLVEEG +LF +ME+DHDV P  K YAC VDL  RAGRL +A+EL+ QMPF P+
Sbjct: 561 TACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPS 620

Query: 609 SGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRGL 668
           + +LE LL+GC  HK+  +G++ ADRL+SL+  N  IY+ LSNIYAEA +W+ V Y+RGL
Sbjct: 621 TDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGL 680

Query: 669 MTEQELKKIPGYSSIEV 685
           M  Q +KKIPGYS IEV
Sbjct: 681 MRMQGMKKIPGYSLIEV 694

BLAST of ClCG03G016440 vs. TrEMBL
Match: V7CHX8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G092700g PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 5.1e-204
Identity = 370/662 (55.89%), Postives = 482/662 (72.81%), Query Frame = 1

Query: 23  SINNALFNPQPNLQPFFSFLQEFPHNILSVKSIHAQIIITNAISGDQILVAKLVQAYSGL 82
           S+++A FN QP L  F+S L +F + ++ VKSIHAQII  N +S +  L AKL++ YS L
Sbjct: 35  SLHHAPFN-QP-LSIFYSLLHQFSNTLIHVKSIHAQII-KNWVSTENYLAAKLIRIYSDL 94

Query: 83  GCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFAL 142
           G L  ARKVFD      T +CNAM+ G+L+N+ + +  +L KMM   D+E +SYTC FAL
Sbjct: 95  GFLFPARKVFDQCSLRGTAVCNAMMAGFLRNQQHMEVPKLFKMMGSGDIEINSYTCMFAL 154

Query: 143 KACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVV 202
           KAC SLLD E+GME++     RG     F+GSSI+NF VK G    A+  F  M EKD+V
Sbjct: 155 KACTSLLDDEIGMEIVMTVFQRGFHLHPFVGSSIVNFFVKCGYFDDARKVFDGMPEKDIV 214

Query: 203 CWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYV 262
           CWN MIGG++QEGLF+E   +FL M+   ++PS VTM  L+++CGE    K G   H  V
Sbjct: 215 CWNSMIGGYVQEGLFNEAIKMFLAMIGGGLKPSPVTMVSLLKACGECGLKKLGTSAHGCV 274

Query: 263 LGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETL 322
           +  GM +D  VLTSL+DMY   GD ++A  +F+ M  R+L+SWN MISGYVQNG + E+ 
Sbjct: 275 IALGMGNDVFVLTSLVDMYSNLGDTDNAALVFNGMFNRSLISWNAMISGYVQNGLIPESF 334

Query: 323 YLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVDLY 382
            LFR LV +  GFDSGT VSL++ CS+T+DL  G++LH CI R+G++ N+VLST+IVD+Y
Sbjct: 335 ALFRRLVQSGSGFDSGTLVSLMRGCSQTSDLKNGRILHSCIIRKGIESNIVLSTSIVDMY 394

Query: 383 AKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLV 442
           +KCG++  A++VF RM+ KNVI+WTAMLVGL+QNG+A DALKLF +MQ E+V  N++TLV
Sbjct: 395 SKCGAIKLATTVFGRMEKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVLANSVTLV 454

Query: 443 SLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCSKINSAEKVFKYGFTP 502
           SLV CCA LG L +GR VHA L R  +A + V ++AL+DMYAKC KI SAEK+F  GF  
Sbjct: 455 SLVHCCAHLGSLNKGRSVHAHLIRHGYAFDAVNMSALLDMYAKCGKIRSAEKLFNKGFHL 514

Query: 503 KDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSLLSACSHSGLVEEGISL 562
           KDVIL N MI GYGMHGLG  AL VY +M  E L+PN++TFVSLL+ACSHSGLVEEG +L
Sbjct: 515 KDVILCNTMIMGYGMHGLGHYALGVYGRMIEERLKPNQTTFVSLLTACSHSGLVEEGKAL 574

Query: 563 FQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIPTSGILETLLNGCLLHK 622
           F  +E+DH++ P +K YAC VDLL RAGRL++A+ L+ QMPF P++ +LE LL+GC  HK
Sbjct: 575 FDCIERDHNIKPQEKHYACLVDLLSRAGRLKEADALVKQMPFQPSTDVLEALLSGCRTHK 634

Query: 623 DIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRGLMTEQELKKIPGYSSI 682
           +I +G++ ADRL+SL+  N  IY+ LSNIYAEA RW+ V Y+RGLM  Q LKK+PGYS I
Sbjct: 635 NINMGIQIADRLISLDYLNSGIYVMLSNIYAEARRWESVNYIRGLMRMQGLKKVPGYSLI 693

Query: 683 EV 685
           EV
Sbjct: 695 EV 693

BLAST of ClCG03G016440 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 399.4 bits (1025), Expect = 4.5e-111
Identity = 220/619 (35.54%), Postives = 349/619 (56.38%), Query Frame = 1

Query: 68  DQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMS 127
           D  L +KL   Y+  G L+ A +VFD     K L  N ++N   ++  ++ SI L K M 
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187

Query: 128 RCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIM 187
              +E DSYT +   K+  SL     G ++    +  G      +G+S++ F +K   + 
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247

Query: 188 SAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCG 247
           SA+  F +M E+DV+ WN +I G++  GL  +G +VF+ ML + IE    T+  +   C 
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307

Query: 248 EMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNV 307
           + R +  G+ +HS  +    S + R   +L+DMY K GD++SA+ +F  M  R++VS+  
Sbjct: 308 DSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTS 367

Query: 308 MISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRG 367
           MI+GY + G   E + LF  +       D  T  +++  C+R   LD GK +H  I    
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427

Query: 368 LDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLF- 427
           L  ++ +S A++D+YAKCGS+  A  VF  M+ K++ISW  ++ G ++N +A +AL LF 
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487

Query: 428 YRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKC 487
             ++ +R + +  T+  ++  CA L    +GR +H  + R  + S+  V  +L+DMYAKC
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547

Query: 488 SKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSL 547
             +  A  +F      KD++ +  MI+GYGMHG G++A+ +++QM   G++ +E +FVSL
Sbjct: 548 GALLLAHMLFD-DIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 607

Query: 548 LSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIP 607
           L ACSHSGLV+EG   F  M  +  + PT + YAC VD+L R G L +A   I  MP  P
Sbjct: 608 LYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPP 667

Query: 608 TSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRG 667
            + I   LL GC +H D++L  K A+++  LE  N   Y+ ++NIYAEA +W+ VK +R 
Sbjct: 668 DATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRK 727

Query: 668 LMTEQELKKIPGYSSIEVK 686
            + ++ L+K PG S IE+K
Sbjct: 728 RIGQRGLRKNPGCSWIEIK 745

HSP 2 Score: 218.0 bits (554), Expect = 1.9e-56
Identity = 129/457 (28.23%), Postives = 231/457 (50.55%), Query Frame = 1

Query: 104 NAMVNGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVC 163
           N  +  + ++ +  ++++LL +  + D+  D  T    L+ C      + G EV      
Sbjct: 65  NTQLRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRG 124

Query: 164 RGLARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNV 223
            G      LGS +       GD+  A   F ++  +  + WN+++    + G FS    +
Sbjct: 125 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 184

Query: 224 FLDMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCK 283
           F  M+ + +E  + T + + +S   +R++  G+ +H ++L  G      V  SL+  Y K
Sbjct: 185 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 244

Query: 284 SGDVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSL 343
           +  V+SAR +FD M  R+++SWN +I+GYV NG   + L +F  ++++    D  T VS+
Sbjct: 245 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 304

Query: 344 IQLCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNV 403
              C+ +  +  G+ +H    +            ++D+Y+KCG L  A +VF  M +++V
Sbjct: 305 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 364

Query: 404 ISWTAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAI 463
           +S+T+M+ G A+ G A +A+KLF  M+ E ++ +  T+ +++ CCA   LL EG+ VH  
Sbjct: 365 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 424

Query: 464 LTRFHFASEVVVITALIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRK 523
           +       ++ V  AL+DMYAKC  +  AE VF      KD+I +N +I GY  +    +
Sbjct: 425 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS-EMRVKDIISWNTIIGGYSKNCYANE 484

Query: 524 ALCVYHQMNLE-GLQPNESTFVSLLSACSHSGLVEEG 560
           AL +++ +  E    P+E T   +L AC+     ++G
Sbjct: 485 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518

HSP 3 Score: 117.9 bits (294), Expect = 2.6e-26
Identity = 78/303 (25.74%), Postives = 148/303 (48.84%), Query Frame = 1

Query: 300 RNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVL 359
           R++   N  +  + ++G L   + L  + V      D  T  S++QLC+ +  L  GK +
Sbjct: 59  RSVTDANTQLRRFCESGNLENAVKL--LCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEV 118

Query: 360 HGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHA 419
              I   G  ++  L + +  +Y  CG L  AS VF+ +K +  + W  ++  LA++G  
Sbjct: 119 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 178

Query: 420 RDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITAL 479
             ++ LF +M +  V  ++ T   + +  + L  +  G  +H  + +  F     V  +L
Sbjct: 179 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 238

Query: 480 IDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPN 539
           +  Y K  +++SA KVF    T +DVI +N++I+GY  +GL  K L V+ QM + G++ +
Sbjct: 239 VAFYLKNQRVDSARKVFDE-MTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 298

Query: 540 ESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELI 599
            +T VS+ + C+ S L+  G ++  ++      +  D+     +D+  + G L  A+ + 
Sbjct: 299 LATIVSVFAGCADSRLISLGRAV-HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 357

Query: 600 NQM 603
            +M
Sbjct: 359 REM 357

BLAST of ClCG03G016440 vs. TAIR10
Match: AT5G39350.1 (AT5G39350.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 394.0 bits (1011), Expect = 1.9e-109
Identity = 227/672 (33.78%), Postives = 366/672 (54.46%), Query Frame = 1

Query: 25  NNALFNPQPNLQPFFSFLQEFP--HNILSVKSIHAQIIITNAISGDQILVAKLVQAYSGL 84
           NNAL     +++ + S L  F    +I   K++H  +I    +SG   +++ L   Y+  
Sbjct: 9   NNAL----SSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGH--ILSTLSVTYALC 68

Query: 85  GCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIEL-LKMMSR-CDLEFDSYTCNF 144
           G +  ARK+F+  PQ   L  N ++  Y++   Y+D+I + ++M+S       D YT  F
Sbjct: 69  GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 128

Query: 145 ALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKD 204
             KA   L   ++G+ V    +     R +++ +++L   +  G +  A+  F  M  +D
Sbjct: 129 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRD 188

Query: 205 VVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHS 264
           V+ WN MI G+ + G  ++   +F  M+   ++    T+  ++  CG +++L+ G+ +H 
Sbjct: 189 VISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK 248

Query: 265 YVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVE 324
            V    +     V  +L++MY K G ++ AR++FD M  R++++W  MI+GY ++G +  
Sbjct: 249 LVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVEN 308

Query: 325 TLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVD 384
            L L R++       ++ T  SL+ +C     ++ GK LHG   R+ +  ++++ T+++ 
Sbjct: 309 ALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLIS 368

Query: 385 LYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFYRMQNERVTFNALT 444
           +YAKC  +     VF      +   W+A++ G  QN    DAL LF RM+ E V  N  T
Sbjct: 369 MYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIAT 428

Query: 445 LVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCSKINSAEKVF---K 504
           L SL+   A L  LR+   +H  LT+  F S +   T L+ +Y+KC  + SA K+F   +
Sbjct: 429 LNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 488

Query: 505 YGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSLLSACSHSGLVE 564
                KDV+L+ A+ISGYGMHG G  AL V+ +M   G+ PNE TF S L+ACSHSGLVE
Sbjct: 489 EKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVE 548

Query: 565 EGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIPTSGILETLLNG 624
           EG++LF+ M + +        Y C VDLL RAGRL +A  LI  +PF PTS +   LL  
Sbjct: 549 EGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAA 608

Query: 625 CLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRGLMTEQELKKIP 684
           C+ H++++LG   A++L  LE  N   Y+ L+NIYA   RW  ++ VR +M    L+K P
Sbjct: 609 CVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKP 668

Query: 685 GYSSIEVKIQSV 690
           G+S+IE++  SV
Sbjct: 669 GHSTIEIRSNSV 674

BLAST of ClCG03G016440 vs. TAIR10
Match: AT4G21300.1 (AT4G21300.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 387.9 bits (995), Expect = 1.4e-107
Identity = 205/618 (33.17%), Postives = 347/618 (56.15%), Query Frame = 1

Query: 68  DQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMS 127
           ++ + + L++AY   G ++   K+FD   Q   ++ N M+NGY +    +  I+   +M 
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231

Query: 128 RCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIM 187
              +  ++ T +  L  C S L  ++G+++  L V  G+     + +S+L+   K G   
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291

Query: 188 SAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCG 247
            A   F  M   D V WN MI G++Q GL  E    F +M+ + + P A+T + L+ S  
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351

Query: 248 EMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNV 307
           +  NL++ K IH Y++   +S D  + ++LID Y K   V  A+ IF      ++V +  
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411

Query: 308 MISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRG 367
           MISGY+ NG  +++L +FR LV      +  T VS++ +      L  G+ LHG I ++G
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471

Query: 368 LDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFY 427
            D    +  A++D+YAKCG +  A  +FER+  ++++SW +M+   AQ+ +   A+ +F 
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531

Query: 428 RMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCS 487
           +M    + ++ +++ + +  CA L     G+ +H  + +   AS+V   + LIDMYAKC 
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591

Query: 488 KINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQM-NLEGLQPNESTFVSL 547
            + +A  VFK     K+++ +N++I+  G HG  + +LC++H+M    G++P++ TF+ +
Sbjct: 592 NLKAAMNVFK-TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 651

Query: 548 LSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIP 607
           +S+C H G V+EG+  F++M +D+ + P  + YAC VDL  RAGRL +A E +  MPF P
Sbjct: 652 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 711

Query: 608 TSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRG 667
            +G+  TLL  C LHK++EL    + +L+ L+  N   Y+ +SN +A A  W+ V  VR 
Sbjct: 712 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 771

Query: 668 LMTEQELKKIPGYSSIEV 685
           LM E+E++KIPGYS IE+
Sbjct: 772 LMKEREVQKIPGYSWIEI 788

HSP 2 Score: 231.5 bits (589), Expect = 1.6e-60
Identity = 159/606 (26.24%), Postives = 305/606 (50.33%), Query Frame = 1

Query: 46  PHNILSVKSIHAQIIITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLL--C 105
           P+ +   K +HA +I+ N+ISGD     +++  Y+  G   +  K+F      ++ +   
Sbjct: 48  PNLLRQGKQVHAFLIV-NSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPW 107

Query: 106 NAMVNGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVC 165
           N++++ +++N   N ++     M    +  D  T    +KAC++L +++ G++ +   V 
Sbjct: 108 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-GIDFLSDTVS 167

Query: 166 R-GLARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYN 225
             G+    F+ SS++   ++ G I      F ++++KD V WNVM+ G+ + G       
Sbjct: 168 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 227

Query: 226 VFLDMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYC 285
            F  M  ++I P+AVT   ++  C     +  G  +H  V+  G+  +  +  SL+ MY 
Sbjct: 228 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 287

Query: 286 KSGDVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVS 345
           K G  + A  +F MM   + V+WN MISGYVQ+G + E+L  F  ++ +    D+ T  S
Sbjct: 288 KCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSS 347

Query: 346 LIQLCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKN 405
           L+   S+  +L+  K +H  I R  + L++ L++A++D Y KC  ++ A ++F +  + +
Sbjct: 348 LLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVD 407

Query: 406 VISWTAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHA 465
           V+ +TAM+ G   NG   D+L++F  +   +++ N +TLVS++    +L  L+ GR +H 
Sbjct: 408 VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 467

Query: 466 ILTRFHFASEVVVITALIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGR 525
            + +  F +   +  A+IDMYAKC ++N A ++F+   + +D++ +N+MI+         
Sbjct: 468 FIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE-RLSKRDIVSWNSMITRCAQSDNPS 527

Query: 526 KALCVYHQMNLEGLQPNESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACF 585
            A+ ++ QM + G+  +  +  + LSAC++      G ++   M K H +       +  
Sbjct: 528 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTL 587

Query: 586 VDLLCRAGRLRQAEELINQMP---FIPTSGILETLLNG-------CLLHKDIELGVKFAD 639
           +D+  + G L+ A  +   M     +  + I+    N        CL H+ +E      D
Sbjct: 588 IDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 647

BLAST of ClCG03G016440 vs. TAIR10
Match: AT2G03380.1 (AT2G03380.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 382.1 bits (980), Expect = 7.4e-106
Identity = 226/639 (35.37%), Postives = 349/639 (54.62%), Query Frame = 1

Query: 48  NILSVKSIHAQIIITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMV 107
           NI S++  H  ++  N + GD  +  KLV  Y   G  ++AR VFD  P+P   L   M+
Sbjct: 56  NIDSLRQSHG-VLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVML 115

Query: 108 NGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLA 167
             Y  N+   + ++L  ++ +    +D    + ALKAC  L D + G + I   + +  +
Sbjct: 116 RCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK-IHCQLVKVPS 175

Query: 168 RGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDM 227
               + + +L+   K G+I SA   F+ +  ++VVCW  MI G+++  L  EG  +F  M
Sbjct: 176 FDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM 235

Query: 228 LYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDV 287
             N +  +  T   LI +C ++  L  GK  H  ++  G+   + ++TSL+DMY K GD+
Sbjct: 236 RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDI 295

Query: 288 ESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLC 347
            +AR +F+     +LV W  MI GY  NG + E L LF+ +   +   +  T  S++  C
Sbjct: 296 SNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 355

Query: 348 SRTADLDGGKVLHGCIYRRGL-DLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISW 407
               +L+ G+ +HG   + G+ D N+  + A+V +YAKC     A  VFE    K++++W
Sbjct: 356 GLIENLELGRSVHGLSIKVGIWDTNV--ANALVHMYAKCYQNRDAKYVFEMESEKDIVAW 415

Query: 408 TAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTR 467
            +++ G +QNG   +AL LF+RM +E VT N +T+ SL   CA LG L  G  +HA   +
Sbjct: 416 NSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK 475

Query: 468 FHF--ASEVVVITALIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKA 527
             F  +S V V TAL+D YAKC    SA  +F      K+ I ++AMI GYG  G    +
Sbjct: 476 LGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT-IEEKNTITWSAMIGGYGKQGDTIGS 535

Query: 528 LCVYHQMNLEGLQPNESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVD 587
           L ++ +M  +  +PNESTF S+LSAC H+G+V EG   F +M KD++ TP+ K Y C VD
Sbjct: 536 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVD 595

Query: 588 LLCRAGRLRQAEELINQMPFIPTSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSI 647
           +L RAG L QA ++I +MP  P        L+GC +H   +LG     ++L L   + S 
Sbjct: 596 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASY 655

Query: 648 YITLSNIYAEASRWDLVKYVRGLMTEQELKKIPGYSSIE 684
           Y+ +SN+YA   RW+  K VR LM ++ L KI G+S++E
Sbjct: 656 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689

HSP 2 Score: 92.4 bits (228), Expect = 1.2e-18
Identity = 72/298 (24.16%), Postives = 133/298 (44.63%), Query Frame = 1

Query: 16  ISHTSKSSINNAL--------FNPQPNLQPFFSFLQE--FPHNILSVKSIHAQIIITNAI 75
           + +T   S+N AL           +PN     S L       N+   +S+H   I     
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI- 375

Query: 76  SGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKM 135
             D  +   LV  Y+      +A+ VF+   +   +  N++++G+ QN   ++++ L   
Sbjct: 376 -WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR 435

Query: 136 MSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGR--FLGSSILNFLVKT 195
           M+   +  +  T      AC SL    +G  +   +V  G        +G+++L+F  K 
Sbjct: 436 MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKC 495

Query: 196 GDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILI 255
           GD  SA+  F  + EK+ + W+ MIGG+ ++G       +F +ML  + +P+  T T ++
Sbjct: 496 GDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSIL 555

Query: 256 QSCGEMRNLKFG-KCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLR 301
            +CG    +  G K   S    +  +  T+  T ++DM  ++G++E A  I + MP++
Sbjct: 556 SACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611

BLAST of ClCG03G016440 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 379.8 bits (974), Expect = 3.7e-105
Identity = 203/627 (32.38%), Postives = 332/627 (52.95%), Query Frame = 1

Query: 59  IIITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYND 118
           ++  N +  +     KLV  +   G ++ A +VF+       +L + M+ G+ +    + 
Sbjct: 59  LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118

Query: 119 SIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILN 178
           +++    M   D+E   Y   + LK C    +  +G E+  L V  G +   F  + + N
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178

Query: 179 FLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVT 238
              K   +  A+  F +M E+D+V WN ++ G+ Q G+      +   M    ++PS +T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238

Query: 239 MTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMP 298
           +  ++ +   +R +  GK IH Y +  G  S   + T+L+DMY K G +E+AR +FD M 
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298

Query: 299 LRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKV 358
            RN+VSWN MI  YVQN    E + +F+ ++         + +  +  C+   DL+ G+ 
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 359 LHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGH 418
           +H      GLD N+ +  +++ +Y KC  +  A+S+F +++++ ++SW AM++G AQNG 
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 419 ARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITA 478
             DAL  F +M++  V  +  T VS++   A L +    + +H ++ R      V V TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478

Query: 479 LIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQP 538
           L+DMYAKC  I  A  +F    + + V  +NAMI GYG HG G+ AL ++ +M    ++P
Sbjct: 479 LVDMYAKCGAIMIARLIFDM-MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 538

Query: 539 NESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEEL 598
           N  TF+S++SACSHSGLVE G+  F  M++++ +  +   Y   VDLL RAGRL +A + 
Sbjct: 539 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 598

Query: 599 INQMPFIPTSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRW 658
           I QMP  P   +   +L  C +HK++    K A+RL  L   +   ++ L+NIY  AS W
Sbjct: 599 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 658

Query: 659 DLVKYVRGLMTEQELKKIPGYSSIEVK 686
           + V  VR  M  Q L+K PG S +E+K
Sbjct: 659 EKVGQVRVSMLRQGLRKTPGCSMVEIK 684

BLAST of ClCG03G016440 vs. NCBI nr
Match: gi|659099713|ref|XP_008450740.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Cucumis melo])

HSP 1 Score: 1224.9 bits (3168), Expect = 0.0e+00
Identity = 610/686 (88.92%), Postives = 635/686 (92.57%), Query Frame = 1

Query: 1   MPPFLHLPCSPLKRFISHTSKSSINNALFNPQPNLQPFFSFLQEFPHNILSVKSIHAQII 60
           MPPFLH PC PLKRFISHTSKSS+ NALFNPQPNLQPF SFLQE PHNILSVKSIHAQII
Sbjct: 1   MPPFLHFPCFPLKRFISHTSKSSLQNALFNPQPNLQPFLSFLQECPHNILSVKSIHAQII 60

Query: 61  ITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSI 120
           ITN I GDQ LVAKLV AYSGLGCLE ARKVFD  PQPKT+LCNAMVNGYLQNEH+ND I
Sbjct: 61  ITNGIYGDQFLVAKLVAAYSGLGCLETARKVFDEIPQPKTVLCNAMVNGYLQNEHFNDCI 120

Query: 121 ELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFL 180
           ELL+MMSRC LEFDSYTCNFALKAC  LLDYEMGMEVIRLAVC+GLARGRFLGSSILNFL
Sbjct: 121 ELLEMMSRCHLEFDSYTCNFALKACTFLLDYEMGMEVIRLAVCKGLARGRFLGSSILNFL 180

Query: 181 VKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMT 240
           VKTGDIM AQ+FFHQM EKDVVCWNVMIGGFMQEGLF EGYN+F DMLYNKIEPSAVTM 
Sbjct: 181 VKTGDIMCAQYFFHQMDEKDVVCWNVMIGGFMQEGLFREGYNLFFDMLYNKIEPSAVTMI 240

Query: 241 ILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLR 300
            LIQSCGE RNLKFGKC+HS+VLGFGMSSDTRVLT+LIDMYCKSGDVESARWIFD MP R
Sbjct: 241 SLIQSCGETRNLKFGKCMHSFVLGFGMSSDTRVLTTLIDMYCKSGDVESARWIFDNMPSR 300

Query: 301 NLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLH 360
           NLVSWNVMISGYVQNG LVETL LF+ L+M+D GFDSGT VSLIQLCSRTADLDGGK+LH
Sbjct: 301 NLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILH 360

Query: 361 GCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHAR 420
           GCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFER+KNKNVISWTAMLVGLAQNGHAR
Sbjct: 361 GCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERIKNKNVISWTAMLVGLAQNGHAR 420

Query: 421 DALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALI 480
           DALKLF +MQNERVTFN LTLVSLV CC LL LLREGR VHA LTRFHFASEVVV+TALI
Sbjct: 421 DALKLFDQMQNERVTFNVLTLVSLVYCCTLLRLLREGRSVHATLTRFHFASEVVVMTALI 480

Query: 481 DMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNE 540
           DMYAKCSKINSAE VFKYG TPKDVILYN+MISGYGMHGLG KALCVYH+MN EGLQPNE
Sbjct: 481 DMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNE 540

Query: 541 STFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELIN 600
           STFVSLLSACSHSGLVEEGI+LFQNM KDH+ TPTDKLYAC VDLL RAGRL+QAEELIN
Sbjct: 541 STFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLQQAEELIN 600

Query: 601 QMPFIPTSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDL 660
           QMPF PTSGILETLLNGCLLHKDIELGVK ADRLLSLESRNPSIYITLSNIYA+ASRWD 
Sbjct: 601 QMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDS 660

Query: 661 VKYVRGLMTEQELKKIPGYSSIEVKI 687
           VK+VRGLM EQE+KKIPG SSIEV I
Sbjct: 661 VKHVRGLMMEQEIKKIPGCSSIEVNI 686

BLAST of ClCG03G016440 vs. NCBI nr
Match: gi|778662656|ref|XP_011659934.1| (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 1220.3 bits (3156), Expect = 0.0e+00
Identity = 612/687 (89.08%), Postives = 633/687 (92.14%), Query Frame = 1

Query: 1   MPPFLHLPCSPLKRFISHTSKSSINNALFNPQPNL-QPFFSFLQEFPHNILSVKSIHAQI 60
           MPPFLH PC PLKRFISHTSKSS+ NALFN QPNL QPF SFLQEF HN+LSVKSIHAQI
Sbjct: 1   MPPFLHFPCFPLKRFISHTSKSSLQNALFNAQPNLLQPFLSFLQEFSHNLLSVKSIHAQI 60

Query: 61  IITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDS 120
           IITN I GDQ LVAKLV AYS LGCLENARKVFD  PQPKT+LCNAMVNGYLQNE YND 
Sbjct: 61  IITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDC 120

Query: 121 IELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNF 180
           IELLKMMSRC LEFDSYTCNFALKACM LLDYEMGMEVI LAVC+GLA GRFLGSSILNF
Sbjct: 121 IELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNF 180

Query: 181 LVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTM 240
           LVKTGDIM AQFFFHQMVEKDVVCWNVMIGGFMQEGLF EGYN+FLDMLYNKIEPSAVTM
Sbjct: 181 LVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTM 240

Query: 241 TILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPL 300
             LIQSCGEMRNL FGKC+H +VLGFGMS DTRVLT+LIDMYCKSGDVESARWIF+ MP 
Sbjct: 241 ISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPS 300

Query: 301 RNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVL 360
           RNLVSWNVMISGYVQNG LVETL LF+ L+M+D GFDSGT VSLIQLCSRTADLDGGK+L
Sbjct: 301 RNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKIL 360

Query: 361 HGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHA 420
           HG IYRRGLDLNLVL TAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHA
Sbjct: 361 HGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHA 420

Query: 421 RDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITAL 480
           RDALKLF +MQNERVTFNALTLVSLV CC LLGLLREGR VHA LTRFHFASEVVV+TAL
Sbjct: 421 RDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTAL 480

Query: 481 IDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPN 540
           IDMYAKCSKINSAE VFKYG TPKDVILYN+MISGYGMHGLG KALCVYH+MN EGLQPN
Sbjct: 481 IDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPN 540

Query: 541 ESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELI 600
           ESTFVSLLSACSHSGLVEEGI+LFQNM KDH+ TPTDKLYAC VDLL RAGRLRQAEELI
Sbjct: 541 ESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELI 600

Query: 601 NQMPFIPTSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWD 660
           NQMPF PTSGILETLLNGCLLHKDIELGVK ADRLLSLESRNPSIYITLSNIYA+ASRWD
Sbjct: 601 NQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWD 660

Query: 661 LVKYVRGLMTEQELKKIPGYSSIEVKI 687
            VKYVRGLM EQE+KKIPGYSSIEV I
Sbjct: 661 SVKYVRGLMMEQEIKKIPGYSSIEVNI 687

BLAST of ClCG03G016440 vs. NCBI nr
Match: gi|700211048|gb|KGN66144.1| (hypothetical protein Csa_1G573630 [Cucumis sativus])

HSP 1 Score: 1042.7 bits (2695), Expect = 2.9e-301
Identity = 522/587 (88.93%), Postives = 543/587 (92.50%), Query Frame = 1

Query: 106 MVNGYLQNEHYNDSIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRG 165
           MVNGYLQNE YND IELLKMMSRC LEFDSYTCNFALKACM LLDYEMGMEVI LAVC+G
Sbjct: 1   MVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKG 60

Query: 166 LARGRFLGSSILNFLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFL 225
           LA GRFLGSSILNFLVKTGDIM AQFFFHQMVEKDVVCWNVMIGGFMQEGLF EGYN+FL
Sbjct: 61  LAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFL 120

Query: 226 DMLYNKIEPSAVTMTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSG 285
           DMLYNKIEPSAVTM  LIQSCGEMRNL FGKC+H +VLGFGMS DTRVLT+LIDMYCKSG
Sbjct: 121 DMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSG 180

Query: 286 DVESARWIFDMMPLRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQ 345
           DVESARWIF+ MP RNLVSWNVMISGYVQNG LVETL LF+ L+M+D GFDSGT VSLIQ
Sbjct: 181 DVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQ 240

Query: 346 LCSRTADLDGGKVLHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERMKNKNVIS 405
           LCSRTADLDGGK+LHG IYRRGLDLNLVL TAIVDLYAKCGSLAYASSVFERMKNKNVIS
Sbjct: 241 LCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVIS 300

Query: 406 WTAMLVGLAQNGHARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILT 465
           WTAMLVGLAQNGHARDALKLF +MQNERVTFNALTLVSLV CC LLGLLREGR VHA LT
Sbjct: 301 WTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLT 360

Query: 466 RFHFASEVVVITALIDMYAKCSKINSAEKVFKYGFTPKDVILYNAMISGYGMHGLGRKAL 525
           RFHFASEVVV+TALIDMYAKCSKINSAE VFKYG TPKDVILYN+MISGYGMHGLG KAL
Sbjct: 361 RFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKAL 420

Query: 526 CVYHQMNLEGLQPNESTFVSLLSACSHSGLVEEGISLFQNMEKDHDVTPTDKLYACFVDL 585
           CVYH+MN EGLQPNESTFVSLLSACSHSGLVEEGI+LFQNM KDH+ TPTDKLYAC VDL
Sbjct: 421 CVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDL 480

Query: 586 LCRAGRLRQAEELINQMPFIPTSGILETLLNGCLLHKDIELGVKFADRLLSLESRNPSIY 645
           L RAGRLRQAEELINQMPF PTSGILETLLNGCLLHKDIELGVK ADRLLSLESRNPSIY
Sbjct: 481 LSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIY 540

Query: 646 ITLSNIYAEASRWDLVKYVRGLMTEQELKKIPGYSSIEVKIQSVCSV 693
           ITLSNIYA+ASRWD VKYVRGLM EQE+KKIPGYSSIE +  ++  V
Sbjct: 541 ITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEGEFAAMLGV 587

BLAST of ClCG03G016440 vs. NCBI nr
Match: gi|700211048|gb|KGN66144.1| (hypothetical protein Csa_1G573630 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46
Identity = 119/463 (25.70%), Postives = 235/463 (50.76%), Query Frame = 1

Query: 59  IIITNAISGDQILVAKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYND 118
           + +   ++G + L + ++      G +  A+  F    +   +  N M+ G++Q   + +
Sbjct: 55  LAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFRE 114

Query: 119 SIELLKMMSRCDLEFDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILN 178
              L   M    +E  + T    +++C  + +   G  +    +  G++R   + +++++
Sbjct: 115 GYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLID 174

Query: 179 FLVKTGDIMSAQFFFHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVT 238
              K+GD+ SA++ F  M  +++V WNVMI G++Q GL  E   +F  ++ + +   + T
Sbjct: 175 MYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGT 234

Query: 239 MTILIQSCGEMRNLKFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMP 298
           +  LIQ C    +L  GK +H ++   G+  +  + T+++D+Y K G +  A  +F+ M 
Sbjct: 235 VVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMK 294

Query: 299 LRNLVSWNVMISGYVQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKV 358
            +N++SW  M+ G  QNG   + L LF  +      F++ T VSL+  C+    L  G+ 
Sbjct: 295 NKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRS 354

Query: 359 LHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFE-RMKNKNVISWTAMLVGLAQNG 418
           +H  + R      +V+ TA++D+YAKC  +  A  VF+  +  K+VI + +M+ G   +G
Sbjct: 355 VHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHG 414

Query: 419 HARDALKLFYRMQNERVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVIT 478
               AL +++RM  E +  N  T VSL+  C+  GL+ EG  +   + + H  +    + 
Sbjct: 415 LGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLY 474

Query: 479 A-LIDMYAKCSKINSAEKVF-KYGFTPKDVILYNAMISGYGMH 519
           A ++D+ ++  ++  AE++  +  FTP   IL   +++G  +H
Sbjct: 475 ACIVDLLSRAGRLRQAEELINQMPFTPTSGIL-ETLLNGCLLH 516

HSP 2 Score: 780.0 bits (2013), Expect = 3.5e-222
Identity = 392/672 (58.33%), Postives = 510/672 (75.89%), Query Frame = 1

Query: 14  RFISHTSKSSINNALFNPQP-NLQPFFSFLQEFPHNILSVKSIHAQIIITNAISGDQILV 73
           +F+S  S SSI NA FN  P ++Q F S L EF + +LSVKSIHAQII TN++S  Q L 
Sbjct: 18  KFLSLHSFSSIKNANFNHLPLDIQRFLSLLHEFSNTLLSVKSIHAQII-TNSVSKHQFLS 77

Query: 74  AKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMSRCDLE 133
           + LV++YS LGCL  ARKVFD  PQPK +LCN+M+NGYL+N+ Y ++IEL ++M   D  
Sbjct: 78  SNLVRSYSELGCLGLARKVFDKIPQPKPILCNSMLNGYLRNQCYKETIELFELMGASDWG 137

Query: 134 FDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIMSAQFF 193
           FDSY+CNF LKACM L DYE G E+I+ AV   +   +FLGSS++NF +K GD  SA+  
Sbjct: 138 FDSYSCNFVLKACMELEDYERGTEIIKRAVDHRVDGDKFLGSSMINFFMKFGDFNSARRV 197

Query: 194 FHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCGEMRNL 253
           F+QM+ +DVVCWN MIGG+++   +   +++FL+M+   + PSA+TM  L+Q+CG MR+L
Sbjct: 198 FNQMISRDVVCWNSMIGGYVKGCYYVAAFDLFLEMILCGVRPSAITMVSLVQACGGMRDL 257

Query: 254 KFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNVMISGY 313
           + GK +H  VL FG+ +D  V T+LIDMY K G+ E AR +FD+MP + LVSWNV+ISGY
Sbjct: 258 ELGKRVHGLVLVFGLGTDVLVHTALIDMYSKLGEHERARSVFDIMPAKTLVSWNVIISGY 317

Query: 314 VQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRGLDLNL 373
           VQN  + E  YLF+ LV+  GGFDSGT +SL+Q C++ ADL+ GKVLHG I+R+GLD+N+
Sbjct: 318 VQNCLVYEAFYLFQKLVLTGGGFDSGTIISLLQSCAQVADLESGKVLHGYIFRKGLDINV 377

Query: 374 VLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFYRMQNE 433
           +L TA+VDLY+KCG+L  A+ +F+RMKN+NVI+WTAMLVGLAQNGHA DA++LF +MQ E
Sbjct: 378 ILCTALVDLYSKCGALKEATFMFDRMKNRNVITWTAMLVGLAQNGHAEDAIRLFGKMQEE 437

Query: 434 RVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCSKINSA 493
            VT N+ TLVSLV CCA LG L++GR VHA L R+ +A +VV  TALIDMYAKC  IN A
Sbjct: 438 GVTANSTTLVSLVHCCAHLGSLKKGRSVHARLLRYGYAFDVVNRTALIDMYAKCGNINYA 497

Query: 494 EKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSLLSACSH 553
           E+VF+     KDVI +N+MI+GYGMHG G KAL +Y +M  EGL+PN++TFVSLLSACSH
Sbjct: 498 ERVFEDVSFFKDVISWNSMITGYGMHGQGHKALDLYRRMLEEGLKPNKTTFVSLLSACSH 557

Query: 554 SGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIPTSGILE 613
           SGLV++G SLF +ME DH++   +K YAC+VDLL RAG +++AE LI QMPF  +  + E
Sbjct: 558 SGLVDQGRSLFLSMESDHNIRANEKHYACYVDLLSRAGHIKEAEVLIKQMPFQSSREVFE 617

Query: 614 TLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRGLMTEQE 673
            LLNGC +HK+I++G+K AD LLSL++ NP IYI LSNIYAEA RWD V ++RGLM  + 
Sbjct: 618 ALLNGCRMHKNIDIGIKAADYLLSLDATNPGIYIMLSNIYAEARRWDAVDHIRGLMRGRG 677

Query: 674 LKKIPGYSSIEV 685
           LKK PGYS IEV
Sbjct: 678 LKKTPGYSLIEV 688

BLAST of ClCG03G016440 vs. NCBI nr
Match: gi|823198858|ref|XP_012434729.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Gossypium raimondii])

HSP 1 Score: 780.0 bits (2013), Expect = 3.5e-222
Identity = 392/672 (58.33%), Postives = 510/672 (75.89%), Query Frame = 1

Query: 14  RFISHTSKSSINNALFNPQP-NLQPFFSFLQEFPHNILSVKSIHAQIIITNAISGDQILV 73
           +F+S  S SSI NA FN  P ++Q F S L EF + +LSVKSIHAQII TN++S  Q L 
Sbjct: 22  KFLSLHSFSSIKNANFNHLPLDIQRFLSLLHEFSNTLLSVKSIHAQII-TNSVSKHQFLS 81

Query: 74  AKLVQAYSGLGCLENARKVFDNFPQPKTLLCNAMVNGYLQNEHYNDSIELLKMMSRCDLE 133
           + LV++YS LGCL  ARKVFD  PQPK +LCN+M+NGYL+N+ Y ++IEL ++M   D  
Sbjct: 82  SNLVRSYSELGCLGLARKVFDKIPQPKPILCNSMLNGYLRNQCYKETIELFELMGASDWG 141

Query: 134 FDSYTCNFALKACMSLLDYEMGMEVIRLAVCRGLARGRFLGSSILNFLVKTGDIMSAQFF 193
           FDSY+CNF LKACM L DYE G E+I+ AV   +   +FLGSS++NF +K GD  SA+  
Sbjct: 142 FDSYSCNFVLKACMELEDYERGTEIIKRAVDHRVDGDKFLGSSMINFFMKFGDFNSARRV 201

Query: 194 FHQMVEKDVVCWNVMIGGFMQEGLFSEGYNVFLDMLYNKIEPSAVTMTILIQSCGEMRNL 253
           F+QM+ +DVVCWN MIGG+++   +   +++FL+M+   + PSA+TM  L+Q+CG MR+L
Sbjct: 202 FNQMISRDVVCWNSMIGGYVKGCYYVAAFDLFLEMILCGVRPSAITMVSLVQACGGMRDL 261

Query: 254 KFGKCIHSYVLGFGMSSDTRVLTSLIDMYCKSGDVESARWIFDMMPLRNLVSWNVMISGY 313
           + GK +H  VL FG+ +D  V T+LIDMY K G+ E AR +FD+MP + LVSWNV+ISGY
Sbjct: 262 ELGKRVHGLVLVFGLGTDVLVHTALIDMYSKLGEHERARSVFDIMPAKTLVSWNVIISGY 321

Query: 314 VQNGFLVETLYLFRMLVMNDGGFDSGTAVSLIQLCSRTADLDGGKVLHGCIYRRGLDLNL 373
           VQN  + E  YLF+ LV+  GGFDSGT +SL+Q C++ ADL+ GKVLHG I+R+GLD+N+
Sbjct: 322 VQNCLVYEAFYLFQKLVLTGGGFDSGTIISLLQSCAQVADLESGKVLHGYIFRKGLDINV 381

Query: 374 VLSTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFYRMQNE 433
           +L TA+VDLY+KCG+L  A+ +F+RMKN+NVI+WTAMLVGLAQNGHA DA++LF +MQ E
Sbjct: 382 ILCTALVDLYSKCGALKEATFMFDRMKNRNVITWTAMLVGLAQNGHAEDAIRLFGKMQEE 441

Query: 434 RVTFNALTLVSLVQCCALLGLLREGRCVHAILTRFHFASEVVVITALIDMYAKCSKINSA 493
            VT N+ TLVSLV CCA LG L++GR VHA L R+ +A +VV  TALIDMYAKC  IN A
Sbjct: 442 GVTANSTTLVSLVHCCAHLGSLKKGRSVHARLLRYGYAFDVVNRTALIDMYAKCGNINYA 501

Query: 494 EKVFKYGFTPKDVILYNAMISGYGMHGLGRKALCVYHQMNLEGLQPNESTFVSLLSACSH 553
           E+VF+     KDVI +N+MI+GYGMHG G KAL +Y +M  EGL+PN++TFVSLLSACSH
Sbjct: 502 ERVFEDVSFFKDVISWNSMITGYGMHGQGHKALDLYRRMLEEGLKPNKTTFVSLLSACSH 561

Query: 554 SGLVEEGISLFQNMEKDHDVTPTDKLYACFVDLLCRAGRLRQAEELINQMPFIPTSGILE 613
           SGLV++G SLF +ME DH++   +K YAC+VDLL RAG +++AE LI QMPF  +  + E
Sbjct: 562 SGLVDQGRSLFLSMESDHNIRANEKHYACYVDLLSRAGHIKEAEVLIKQMPFQSSREVFE 621

Query: 614 TLLNGCLLHKDIELGVKFADRLLSLESRNPSIYITLSNIYAEASRWDLVKYVRGLMTEQE 673
            LLNGC +HK+I++G+K AD LLSL++ NP IYI LSNIYAEA RWD V ++RGLM  + 
Sbjct: 622 ALLNGCRMHKNIDIGIKAADYLLSLDATNPGIYIMLSNIYAEARRWDAVDHIRGLMRGRG 681

Query: 674 LKKIPGYSSIEV 685
           LKK PGYS IEV
Sbjct: 682 LKKTPGYSLIEV 692