CSPI01G27230 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G27230
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionPentatricopeptide repeat-containing protein
LocationChr1 : 22136850 .. 22140652 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTTTCCTACTTTTCATCAAATCGAGTTTCGTGTCCAGCATGTCGGGCCTTCCAATCATCGATTTCATCATCAAGTTTTGGAAATTCAAAGACGTATTAGCCACTCTCTCATGTTCAACTTTCCTCCCCAAATCATCCATCAAACGTTGCCGATTCCACTTGACTATGATAATAATTTTTTTCCTCTCCATTTCAACTTTTTCCATAGCTACGGTGAACCAAGTTCTTTCACATTCTACATAGCCCAATTGTTTTCCTCTCTCAACATTAACTCCATTGCTTCCGAAGCTATGGCTAGGAATATTTTCCTAATTGCCAACCAAGTCGCTAATGAAAACTCAAATGCGAGCTTTCACATTGCCGTCATCATCGACTTCATCAACTTCACCTGGATGTGTCCGTTATCTTTTTCGACAAGACAATTGACGGGAAACGAGGTGAGCATGGTGGAACATAAAAAGATTGGGAATGATTTGGGTGATTGTAGTATTTGTTTGGATGAATTATCCCCTAGTAATAGAGAGGTAGTGTTAAAGATATCATGTGGACATGTGTATCACGAGTTATGTATTTTGAGGTGGTTGGATAACAGTGATTCTTGCCCCTTATGTAGAAGGTCAGTCCTTTTCCATTTTGAGAACTAATTTGTACTTGAATAATAACATAAGTTTAGCTCAATTGACATTTATATCTTTCCAATAACAATAAGTTATGGGTTCGAATTTCCATTAGTACTTAATGAGACATTTGCAAATAATGTTAATACACCACTTTACTCCCTTGTCATTACTAGTAATAAATAATGATAATTGTAACAATATGTTACTACAAATTTTGGATTATATATCTCTATCTCTCACTTTCTTTATTTTCATGTTCACCTCTTCTATGTGAATCAAAATGTTTGATGCAAACTTTCAAATACACATTAGTTCATTATGATATTTGATTCTTTTAGAACAATCATTATAGAAATAGAGAATCCAACCTTTAAATCATATACTAACTATCAATTAACTAAACTCAATTTGAATATAATTATTTTTAATTAAAAAAGATTCTTTTTTCTTTTTTAGTTTAGAAAAATTTAGAATTCCTACACTCCATTTGAAAATTTGAAAATTCTTAAATAAAACTAATTCAAATTAGAAAAAAAATTTAAATTTTGCCTAGAAATTAGGGGTGTTAAAGAAAAGTAGATTAACCAATTCAACTCATATTTTGTGTTGTATTAGAATATTGAAGAAAAATTAAAGTTAATTGCAAAGAAGGGTTAGGTTGACTCGACCAACCCGATTATATATATAAACCTAAAAAGTAAACCTCGTATTGATTAAATATTGTATACATCAAATTTAAAATATAATATATATAATATAACATTGCAGCTTCAATAATAATTTATTCACACCCGAATTGAATTAGGTTGGATTGGGTTGAACATTCCATATTTTCTCAATTAAAATGTATGTTTCCTAAGTGAAAACAAGAGTTAACGTTTCTAAATTAACAAATTTTCATTTGGGCTGTTGGTTTAGGCCATCCATGCGAACTTCCCTTCCTTTGATCGTTTCCTTTTGGCTATGGCTTTTCTCCACCACTCTCCTTCTTCTTCCTTCTTTTGATGCCGCCTTTTCTTCACTTTCCTTGTTTTCCTCTCAAAAGGTTCATTTCACACACCTCAAAATCCTCTTTACAAAATGCCCTCTTCAATGCACAACCCAATCTTCTTCAACCATTTCTCTCATTTCTCCAAGAATTTTCCCATAACCTTCTATCGGTCAAATCCATACACGCCCAGATTATTATCACAAACCCCATATATGGGGACCAATTTTTGGTTGCAAAACTTGTTGCGGCTTACTCGAGTTTGGGTTGTTTGGAAAATGCTCGGAAAGTGTTTGATGAAATTCCTCAACCAAAAACTGTTCTTTGCAATGCCATGGTTAATGGGTATCTGCAAAATGAGCGTTATAACGACTGTATCGAGCTGCTTAAGATGATGAGTCGATGTCATTTGGAATTCGATAGTTATACTTGTAATTTTGCTCTTAAGGCATGCATGTTCTTATTGGATTATGAAATGGGGATGGAAGTGATTGGATTAGCGGTGTGTAAGGGATTGGCTGGAGGTCGGTTTTTGGGGAGTTCTATTTTGAATTTTTTGGTGAAAACTGGTGATATTATGTGTGCACAATTTTTTTTTCATCAAATGGTTGAGAAAGATGTTGTTTGTTGGAATGTGATGATTGGTGGGTTTATGCAGGAAGGCTTGTTTCGTGAAGGCTATAATCTTTTTCTTGATATGCTTTATAATAAAATTGAGCCTAGTGCTGTGACCATGATTAGCTTGATTCAGTCTTGTGGGGAGATGAGGAATTTAACGTTTGGAAAATGTATGCATGGCTTTGTTCTTGGATTTGGAATGAGTCGTGATACAAGAGTGCTTACCACGTTGATTGATATGTATTGTAAATCAGGTGACGTCGAAAGTGCTCGATGGATTTTTGAGAACATGCCCTCTAGGAATTTGGTCTCATGGAATGTTATGATTTCGGGATACGTTCAAAATGGTTTGCTTGTTGAAACTTTACGACTCTTTCAGAAGTTGATTATGGATGATGTAGGTTTCGATTCAGGTACCGTTGTTAGCCTCATCCAGCTTTGTTCTCGCACGGCTGATTTGGATGGTGGCAAGATTCTTCATGGTTTCATCTATCGAAGGGGACTTGATTTGAATTTGGTTTTACCTACTGCAATTGTTGATTTATATGCTAAATGTGGATCCCTGGCCTACGCATCTTCCGTTTTTGAAAGAATGAAAAATAAGAATGTGATTTCATGGACTGCCATGCTTGTGGGATTGGCACAGAATGGGCATGCTAGAGATGCTTTGAAGTTATTTGATCAGATGCAAAATGAAAGGGTTACTTTCAATGCTCTCACCTTAGTTAGTTTAGTCTATTGTTGTACACTCCTAGGCTTGTTACGTGAAGGGAGAAGCGTACATGCTACCTTAACTCGATTTCATTTTGCTTCTGAAGTCGTCGTTATGACGGCCCTAATTGATATGTATGCAAAATGCAGCAAAATAAACTCTGCTGAGATGGTATTCAAGTATGGTCTTACGCCGAAGGATGTGATACTGTATAACTCTATGATTTCGGGATATGGAATGCACGGTCTCGGGCATAAAGCACTGTGCGTCTACCATCGGATGAATCGAGAAGGACTTCAACCAAATGAGAGCACCTTTGTTTCTCTGCTATCGGCTTGTAGCCACTCAGGACTAGTGGAAGAGGGGATTGCTTTGTTTCAAAACATGGTGAAAGATCATAACACCACACCTACTGATAAACTTTACGCTTGTATTGTCGATCTTCTAAGTCGAGCAGGTCGCCTTCGGCAAGCTGAAGAATTAATCAATCAAATGCCTTTCACACCAACCAGTGGCATACTTGAAACTCTACTGAATGGATGTCTTCTGCACAAGGACATTGAATTAGGGGTAAAACTTGCTGACAGATTACTCTCATTGGAGTCTAGAAATCCGAGTATCTACATTACCTTGTCGAATATATACGCCAAAGCAAGTCGATGGGATTCGGTAAAGTACGTTCGAGGTCTCATGATGGAGCAAGAGATTAAAAAGATTCCAGGATATAGCTCAATTGAAGTAAATATTTAGTCTATATGCTTTGTGCAATAGGGAGAATTTGCAGCCATGTTGGGTGTCATCAAGCAAATGCTTGGGAGTTCAAGATGGCCATCTGTTGTGTCATATTTTGTTCATTACTAA

mRNA sequence

ATGGCTTTTCCTACTTTTCATCAAATCGAGTTTCGTGTCCAGCATGTCGGGCCTTCCAATCATCGATTTCATCATCAAGTTTTGGAAATTCAAAGACGTATTAGCCACTCTCTCATGTTCAACTTTCCTCCCCAAATCATCCATCAAACGTTGCCGATTCCACTTGACTATGATAATAATTTTTTTCCTCTCCATTTCAACTTTTTCCATAGCTACGGTGAACCAAGTTCTTTCACATTCTACATAGCCCAATTGTTTTCCTCTCTCAACATTAACTCCATTGCTTCCGAAGCTATGGCTAGGAATATTTTCCTAATTGCCAACCAAGTCGCTAATGAAAACTCAAATGCGAGCTTTCACATTGCCGTCATCATCGACTTCATCAACTTCACCTGGATGTGTCCGTTATCTTTTTCGACAAGACAATTGACGGGAAACGAGGTGAGCATGGTGGAACATAAAAAGATTGGGAATGATTTGGGTGATTGTAGTATTTGTTTGGATGAATTATCCCCTAGTAATAGAGAGGTAGTGTTAAAGATATCATGTGGACATGTGTATCACGAGTTATGTATTTTGAGGTGGTTGGATAACAGTGATTCTTGCCCCTTATGTAGAAGGCCATCCATGCGAACTTCCCTTCCTTTGATCGTTTCCTTTTGGCTATGGCTTTTCTCCACCACTCTCCTTCTTCTTCCTTCTTTTGATGCCGCCTTTTCTTCACTTTCCTTGTTTTCCTCTCAAAAGATTATTATCACAAACCCCATATATGGGGACCAATTTTTGGTTGCAAAACTTGTTGCGGCTTACTCGAGTTTGGGTTGTTTGGAAAATGCTCGGAAAGTGTTTGATGAAATTCCTCAACCAAAAACTGTTCTTTGCAATGCCATGGTTAATGGGTATCTGCAAAATGAGCGTTATAACGACTGTATCGAGCTGCTTAAGATGATGAGTCGATGTCATTTGGAATTCGATAGTTATACTTGTAATTTTGCTCTTAAGGCATGCATGTTCTTATTGGATTATGAAATGGGGATGGAAGTGATTGGATTAGCGGTGTGTAAGGGATTGGCTGGAGGTCGGTTTTTGGGGAGTTCTATTTTGAATTTTTTGGTGAAAACTGGTGATATTATGTGTGCACAATTTTTTTTTCATCAAATGGTTGAGAAAGATGTTGTTTGTTGGAATGTGATGATTGGTGGGTTTATGCAGGAAGGCTTGTTTCGTGAAGGCTATAATCTTTTTCTTGATATGCTTTATAATAAAATTGAGCCTAGTGCTGTGACCATGATTAGCTTGATTCAGTCTTGTGGGGAGATGAGGAATTTAACGTTTGGAAAATGTATGCATGGCTTTGTTCTTGGATTTGGAATGAGTCGTGATACAAGAGTGCTTACCACGTTGATTGATATGTATTGTAAATCAGGTGACGTCGAAAGTGCTCGATGGATTTTTGAGAACATGCCCTCTAGGAATTTGGTCTCATGGAATGTTATGATTTCGGGATACGTTCAAAATGGTTTGCTTGTTGAAACTTTACGACTCTTTCAGAAGTTGATTATGGATGATGTAGGTTTCGATTCAGGTACCGTTGTTAGCCTCATCCAGCTTTGTTCTCGCACGGCTGATTTGGATGGTGGCAAGATTCTTCATGGTTTCATCTATCGAAGGGGACTTGATTTGAATTTGGTTTTACCTACTGCAATTGTTGATTTATATGCTAAATGTGGATCCCTGGCCTACGCATCTTCCGTTTTTGAAAGAATGAAAAATAAGAATGTGATTTCATGGACTGCCATGCTTGTGGGATTGGCACAGAATGGGCATGCTAGAGATGCTTTGAAGTTATTTGATCAGATGCAAAATGAAAGGGTTACTTTCAATGCTCTCACCTTAGTTAGTTTAGTCTATTGTTGTACACTCCTAGGCTTGTTACGTGAAGGGAGAAGCGTACATGCTACCTTAACTCGATTTCATTTTGCTTCTGAAGTCGTCGTTATGACGGCCCTAATTGATATGTATGCAAAATGCAGCAAAATAAACTCTGCTGAGATGGTATTCAAGTATGGTCTTACGCCGAAGGATGTGATACTGTATAACTCTATGATTTCGGGATATGGAATGCACGGTCTCGGGCATAAAGCACTGTGCGTCTACCATCGGATGAATCGAGAAGGACTTCAACCAAATGAGAGCACCTTTGTTTCTCTGCTATCGGCTTGTAGCCACTCAGGACTAGTGGAAGAGGGGATTGCTTTGTTTCAAAACATGGTGAAAGATCATAACACCACACCTACTGATAAACTTTACGCTTGTATTGTCGATCTTCTAAGTCGAGCAGGTCGCCTTCGGCAAGCTGAAGAATTAATCAATCAAATGCCTTTCACACCAACCAGTGGCATACTTGAAACTCTACTGAATGGATGTCTTCTGCACAAGGACATTGAATTAGGGGTAAAACTTGCTGACAGATTACTCTCATTGGAGTCTAGAAATCCGAGTATCTACATTACCTTGTCGAATATATACGCCAAAGCAAGTCGATGGGATTCGGTAAAGTACGTTCGAGGTCTCATGATGGAGCAAGAGATTAAAAAGATTCCAGGATATAGCTCAATTGAAGGAGAATTTGCAGCCATGTTGGGTGTCATCAAGCAAATGCTTGGGAGTTCAAGATGGCCATCTGTTGTGTCATATTTTGTTCATTACTAA

Coding sequence (CDS)

ATGGCTTTTCCTACTTTTCATCAAATCGAGTTTCGTGTCCAGCATGTCGGGCCTTCCAATCATCGATTTCATCATCAAGTTTTGGAAATTCAAAGACGTATTAGCCACTCTCTCATGTTCAACTTTCCTCCCCAAATCATCCATCAAACGTTGCCGATTCCACTTGACTATGATAATAATTTTTTTCCTCTCCATTTCAACTTTTTCCATAGCTACGGTGAACCAAGTTCTTTCACATTCTACATAGCCCAATTGTTTTCCTCTCTCAACATTAACTCCATTGCTTCCGAAGCTATGGCTAGGAATATTTTCCTAATTGCCAACCAAGTCGCTAATGAAAACTCAAATGCGAGCTTTCACATTGCCGTCATCATCGACTTCATCAACTTCACCTGGATGTGTCCGTTATCTTTTTCGACAAGACAATTGACGGGAAACGAGGTGAGCATGGTGGAACATAAAAAGATTGGGAATGATTTGGGTGATTGTAGTATTTGTTTGGATGAATTATCCCCTAGTAATAGAGAGGTAGTGTTAAAGATATCATGTGGACATGTGTATCACGAGTTATGTATTTTGAGGTGGTTGGATAACAGTGATTCTTGCCCCTTATGTAGAAGGCCATCCATGCGAACTTCCCTTCCTTTGATCGTTTCCTTTTGGCTATGGCTTTTCTCCACCACTCTCCTTCTTCTTCCTTCTTTTGATGCCGCCTTTTCTTCACTTTCCTTGTTTTCCTCTCAAAAGATTATTATCACAAACCCCATATATGGGGACCAATTTTTGGTTGCAAAACTTGTTGCGGCTTACTCGAGTTTGGGTTGTTTGGAAAATGCTCGGAAAGTGTTTGATGAAATTCCTCAACCAAAAACTGTTCTTTGCAATGCCATGGTTAATGGGTATCTGCAAAATGAGCGTTATAACGACTGTATCGAGCTGCTTAAGATGATGAGTCGATGTCATTTGGAATTCGATAGTTATACTTGTAATTTTGCTCTTAAGGCATGCATGTTCTTATTGGATTATGAAATGGGGATGGAAGTGATTGGATTAGCGGTGTGTAAGGGATTGGCTGGAGGTCGGTTTTTGGGGAGTTCTATTTTGAATTTTTTGGTGAAAACTGGTGATATTATGTGTGCACAATTTTTTTTTCATCAAATGGTTGAGAAAGATGTTGTTTGTTGGAATGTGATGATTGGTGGGTTTATGCAGGAAGGCTTGTTTCGTGAAGGCTATAATCTTTTTCTTGATATGCTTTATAATAAAATTGAGCCTAGTGCTGTGACCATGATTAGCTTGATTCAGTCTTGTGGGGAGATGAGGAATTTAACGTTTGGAAAATGTATGCATGGCTTTGTTCTTGGATTTGGAATGAGTCGTGATACAAGAGTGCTTACCACGTTGATTGATATGTATTGTAAATCAGGTGACGTCGAAAGTGCTCGATGGATTTTTGAGAACATGCCCTCTAGGAATTTGGTCTCATGGAATGTTATGATTTCGGGATACGTTCAAAATGGTTTGCTTGTTGAAACTTTACGACTCTTTCAGAAGTTGATTATGGATGATGTAGGTTTCGATTCAGGTACCGTTGTTAGCCTCATCCAGCTTTGTTCTCGCACGGCTGATTTGGATGGTGGCAAGATTCTTCATGGTTTCATCTATCGAAGGGGACTTGATTTGAATTTGGTTTTACCTACTGCAATTGTTGATTTATATGCTAAATGTGGATCCCTGGCCTACGCATCTTCCGTTTTTGAAAGAATGAAAAATAAGAATGTGATTTCATGGACTGCCATGCTTGTGGGATTGGCACAGAATGGGCATGCTAGAGATGCTTTGAAGTTATTTGATCAGATGCAAAATGAAAGGGTTACTTTCAATGCTCTCACCTTAGTTAGTTTAGTCTATTGTTGTACACTCCTAGGCTTGTTACGTGAAGGGAGAAGCGTACATGCTACCTTAACTCGATTTCATTTTGCTTCTGAAGTCGTCGTTATGACGGCCCTAATTGATATGTATGCAAAATGCAGCAAAATAAACTCTGCTGAGATGGTATTCAAGTATGGTCTTACGCCGAAGGATGTGATACTGTATAACTCTATGATTTCGGGATATGGAATGCACGGTCTCGGGCATAAAGCACTGTGCGTCTACCATCGGATGAATCGAGAAGGACTTCAACCAAATGAGAGCACCTTTGTTTCTCTGCTATCGGCTTGTAGCCACTCAGGACTAGTGGAAGAGGGGATTGCTTTGTTTCAAAACATGGTGAAAGATCATAACACCACACCTACTGATAAACTTTACGCTTGTATTGTCGATCTTCTAAGTCGAGCAGGTCGCCTTCGGCAAGCTGAAGAATTAATCAATCAAATGCCTTTCACACCAACCAGTGGCATACTTGAAACTCTACTGAATGGATGTCTTCTGCACAAGGACATTGAATTAGGGGTAAAACTTGCTGACAGATTACTCTCATTGGAGTCTAGAAATCCGAGTATCTACATTACCTTGTCGAATATATACGCCAAAGCAAGTCGATGGGATTCGGTAAAGTACGTTCGAGGTCTCATGATGGAGCAAGAGATTAAAAAGATTCCAGGATATAGCTCAATTGAAGGAGAATTTGCAGCCATGTTGGGTGTCATCAAGCAAATGCTTGGGAGTTCAAGATGGCCATCTGTTGTGTCATATTTTGTTCATTACTAA
Homology
[Close]
BLAST of CSPI01G27230 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.6e-115
Identity = 219/629 (34.82%), Postives = 369/629 (58.66%), Query Frame = 1 

Query: 252 ITNPIYGDQFLV-----AKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNER 311
           + N I G+ F++     +KL   Y++ G L+ A +VFDE+   K +  N ++N   ++  
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175

Query: 312 YNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSS 371
           ++  I L K M    +E DSYT +   K+   L     G ++ G  +  G      +G+S
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235

Query: 372 ILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPS 431
           ++ F +K   +  A+  F +M E+DV+ WN +I G++  GL  +G ++F+ ML + IE  
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295

Query: 432 AVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFE 491
             T++S+   C + R ++ G+ +H   +    SR+ R   TL+DMY K GD++SA+ +F 
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355

Query: 492 NMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDG 551
            M  R++VS+  MI+GY + GL  E ++LF+++  + +  D  TV +++  C+R   LD 
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415

Query: 552 GKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQ 611
           GK +H +I    L  ++ +  A++D+YAKCGS+  A  VF  M+ K++ISW  ++ G ++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475

Query: 612 NGHARDALKLFD-QMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVV 671
           N +A +AL LF+  ++ +R + +  T+  ++  C  L    +GR +H  + R  + S+  
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535

Query: 672 VMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNRE 731
           V  +L+DMYAKC  +  A M+F   +  KD++ +  MI+GYGMHG G +A+ ++++M + 
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFD-DIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 595

Query: 732 GLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQ 791
           G++ +E +FVSLL ACSHSGLV+EG   F  M  +    PT + YACIVD+L+R G L +
Sbjct: 596 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 655

Query: 792 AEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAK 851
           A   I  MP  P + I   LL GC +H D++L  K+A+++  LE  N   Y+ ++NIYA+
Sbjct: 656 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 715

Query: 852 ASRWDSVKYVRGLMMEQEIKKIPGYSSIE 875
           A +W+ VK +R  + ++ ++K PG S IE
Sbjct: 716 AEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743

[Close]
BLAST of CSPI01G27230 vs. Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.5e-113
Identity = 209/617 (33.87%), Postives = 353/617 (57.21%), Query Frame = 1 

Query: 259 DQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMS 318
           ++F+ + L+ AY   G ++   K+FD + Q   V+ N M+NGY +    +  I+   +M 
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231

Query: 319 RCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIM 378
              +  ++ T +  L  C   L  ++G+++ GL V  G+     + +S+L+   K G   
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291

Query: 379 CAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCG 438
            A   F  M   D V WN MI G++Q GL  E    F +M+ + + P A+T  SL+ S  
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351

Query: 439 EMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNV 498
           +  NL + K +H +++   +S D  + + LID Y K   V  A+ IF    S ++V +  
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411

Query: 499 MISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRG 558
           MISGY+ NGL +++L +F+ L+   +  +  T+VS++ +      L  G+ LHGFI ++G
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471

Query: 559 LDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFD 618
            D    +  A++D+YAKCG +  A  +FER+  ++++SW +M+   AQ+ +   A+ +F 
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531

Query: 619 QMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCS 678
           QM    + ++ +++ + +  C  L     G+++H  + +   AS+V   + LIDMYAKC 
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591

Query: 679 KINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRM-NREGLQPNESTFVSL 738
            + +A  VFK  +  K+++ +NS+I+  G HG    +LC++H M  + G++P++ TF+ +
Sbjct: 592 NLKAAMNVFK-TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 651

Query: 739 LSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTP 798
           +S+C H G V+EG+  F++M +D+   P  + YAC+VDL  RAGRL +A E +  MPF P
Sbjct: 652 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 711

Query: 799 TSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVKYVRG 858
            +G+  TLL  C LHK++EL    + +L+ L+  N   Y+ +SN +A A  W+SV  VR 
Sbjct: 712 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 771

Query: 859 LMMEQEIKKIPGYSSIE 875
           LM E+E++KIPGYS IE
Sbjct: 772 LMKEREVQKIPGYSWIE 787

[Close]
BLAST of CSPI01G27230 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 7.1e-111
Identity = 207/625 (33.12%), Postives = 342/625 (54.72%), Query Frame = 1 

Query: 250 IIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYND 309
           ++  N +Y + F   KLV+ +   G ++ A +VF+ I     VL + M+ G+ +    + 
Sbjct: 59  LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118

Query: 310 CIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILN 369
            ++    M    +E   Y   + LK C    +  +G E+ GL V  G +   F  + + N
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178

Query: 370 FLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVT 429
              K   +  A+  F +M E+D+V WN ++ G+ Q G+ R    +   M    ++PS +T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238

Query: 430 MISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMP 489
           ++S++ +   +R ++ GK +HG+ +  G      + T L+DMY K G +E+AR +F+ M 
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298

Query: 490 SRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKI 549
            RN+VSWN MI  YVQN    E + +FQK++ + V     +V+  +  C+   DL+ G+ 
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 550 LHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGH 609
           +H      GLD N+ +  +++ +Y KC  +  A+S+F +++++ ++SW AM++G AQNG 
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 610 ARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTA 669
             DAL  F QM++  V  +  T VS++     L +    + +H  + R      V V TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478

Query: 670 LIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQP 729
           L+DMYAKC  I  A ++F   ++ + V  +N+MI GYG HG G  AL ++  M +  ++P
Sbjct: 479 LVDMYAKCGAIMIARLIFDM-MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 538

Query: 730 NESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEEL 789
           N  TF+S++SACSHSGLVE G+  F  M ++++   +   Y  +VDLL RAGRL +A + 
Sbjct: 539 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 598

Query: 790 INQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRW 849
           I QMP  P   +   +L  C +HK++    K A+RL  L   +   ++ L+NIY  AS W
Sbjct: 599 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 658

Query: 850 DSVKYVRGLMMEQEIKKIPGYSSIE 875
           + V  VR  M+ Q ++K PG S +E
Sbjct: 659 EKVGQVRVSMLRQGLRKTPGCSMVE 682

[Close]
BLAST of CSPI01G27230 vs. Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 2.1e-110
Identity = 227/635 (35.75%), Postives = 356/635 (56.06%), Query Frame = 1 

Query: 243 SLFSSQKIIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYL 302
           SL  S  ++  N + GD  +  KLV+ Y   G  ++AR VFD+IP+P   L   M+  Y 
Sbjct: 59  SLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYC 118

Query: 303 QNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRF 362
            N+   + ++L  ++ +    +D    + ALKAC  L D + G + I   + K  +    
Sbjct: 119 LNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK-IHCQLVKVPSFDNV 178

Query: 363 LGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNK 422
           + + +L+   K G+I  A   F+ +  ++VVCW  MI G+++  L  EG  LF  M  N 
Sbjct: 179 VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENN 238

Query: 423 IEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESAR 482
           +  +  T  +LI +C ++  L  GK  HG ++  G+   + ++T+L+DMY K GD+ +AR
Sbjct: 239 VLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNAR 298

Query: 483 WIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTA 542
            +F      +LV W  MI GY  NG + E L LFQK+   ++  +  T+ S++  C    
Sbjct: 299 RVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIE 358

Query: 543 DLDGGKILHGFIYRRGL-DLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAML 602
           +L+ G+ +HG   + G+ D N+    A+V +YAKC     A  VFE    K++++W +++
Sbjct: 359 NLELGRSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSII 418

Query: 603 VGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHF- 662
            G +QNG   +AL LF +M +E VT N +T+ SL   C  LG L  G S+HA   +  F 
Sbjct: 419 SGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFL 478

Query: 663 -ASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVY 722
            +S V V TAL+D YAKC    SA ++F   +  K+ I +++MI GYG  G    +L ++
Sbjct: 479 ASSSVHVGTALLDFYAKCGDPQSARLIFDT-IEEKNTITWSAMIGGYGKQGDTIGSLELF 538

Query: 723 HRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSR 782
             M ++  +PNESTF S+LSAC H+G+V EG   F +M KD+N TP+ K Y C+VD+L+R
Sbjct: 539 EEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLAR 598

Query: 783 AGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITL 842
           AG L QA ++I +MP  P        L+GC +H   +LG  +  ++L L   + S Y+ +
Sbjct: 599 AGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLV 658

Query: 843 SNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 875
           SN+YA   RW+  K VR LM ++ + KI G+S++E
Sbjct: 659 SNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689

[Close]
BLAST of CSPI01G27230 vs. Swiss-Prot
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.1e-109
Identity = 217/645 (33.64%), Postives = 358/645 (55.50%), Query Frame = 1 

Query: 239 FSSLSLFSSQKIIITNPIYGDQF---LVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCN 298
           F++    S  K +  + I G +    +++ L   Y+  G +  ARK+F+E+PQ   +  N
Sbjct: 25  FAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYN 84

Query: 299 AMVNGYLQNERYNDCIEL-LKMMSR-CHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAV 358
            ++  Y++   Y+D I + ++M+S       D YT  F  KA   L   ++G+ V G  +
Sbjct: 85  IVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRIL 144

Query: 359 CKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYN 418
                  +++ +++L   +  G +  A+  F  M  +DV+ WN MI G+ + G   +   
Sbjct: 145 RSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALM 204

Query: 419 LFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYC 478
           +F  M+   ++    T++S++  CG +++L  G+ +H  V    +     V   L++MY 
Sbjct: 205 MFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYL 264

Query: 479 KSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVS 538
           K G ++ AR++F+ M  R++++W  MI+GY ++G +   L L + +  + V  ++ T+ S
Sbjct: 265 KCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIAS 324

Query: 539 LIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKN 598
           L+ +C     ++ GK LHG+  R+ +  ++++ T+++ +YAKC  +     VF      +
Sbjct: 325 LVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYH 384

Query: 599 VISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHA 658
              W+A++ G  QN    DAL LF +M+ E V  N  TL SL+     L  LR+  ++H 
Sbjct: 385 TGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHC 444

Query: 659 TLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGL----TPKDVILYNSMISGYGMH 718
            LT+  F S +   T L+ +Y+KC  + SA  +F  G+      KDV+L+ ++ISGYGMH
Sbjct: 445 YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN-GIQEKHKSKDVVLWGALISGYGMH 504

Query: 719 GLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKL 778
           G GH AL V+  M R G+ PNE TF S L+ACSHSGLVEEG+ LF+ M++ + T      
Sbjct: 505 GDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNH 564

Query: 779 YACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLE 838
           Y CIVDLL RAGRL +A  LI  +PF PTS +   LL  C+ H++++LG   A++L  LE
Sbjct: 565 YTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELE 624

Query: 839 SRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 875
             N   Y+ L+NIYA   RW  ++ VR +M    ++K PG+S+IE
Sbjct: 625 PENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668

[Close]
BLAST of CSPI01G27230 vs. TrEMBL
Match: A0A0A0LYM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573630 PE=4 SV=1)

HSP 1 Score: 1226.1 bits (3171), Expect = 0.0e+00
Identity = 607/607 (100.00%), Postives = 607/607 (100.00%), Query Frame = 1 

Query: 297 MVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKG 356
           MVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKG
Sbjct: 1   MVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKG 60

Query: 357 LAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFL 416
           LAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFL
Sbjct: 61  LAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFL 120

Query: 417 DMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSG 476
           DMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSG
Sbjct: 121 DMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSG 180

Query: 477 DVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQ 536
           DVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQ
Sbjct: 181 DVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQ 240

Query: 537 LCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVIS 596
           LCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVIS
Sbjct: 241 LCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVIS 300

Query: 597 WTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLT 656
           WTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLT
Sbjct: 301 WTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLT 360

Query: 657 RFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKAL 716
           RFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKAL
Sbjct: 361 RFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKAL 420

Query: 717 CVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDL 776
           CVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDL
Sbjct: 421 CVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDL 480

Query: 777 LSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIY 836
           LSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIY
Sbjct: 481 LSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIY 540

Query: 837 ITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEGEFAAMLGVIKQMLGSSRWPSV 896
           ITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEGEFAAMLGVIKQMLGSSRWPSV
Sbjct: 541 ITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEGEFAAMLGVIKQMLGSSRWPSV 600

Query: 897 VSYFVHY 904
           VSYFVHY
Sbjct: 601 VSYFVHY 607

[Close]
BLAST of CSPI01G27230 vs. TrEMBL
Match: A0A061F2D9_THECC (Pentatricopeptide repeat superfamily protein OS=Theobroma cacao GN=TCM_026441 PE=4 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 3.7e-215
Identity = 370/650 (56.92%), Postives = 490/650 (75.38%), Query Frame = 1 

Query: 225 FSTTLLLLPSFDAAFSSLSLFSSQKIIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFD 284
           F+  LLLL  F      +    +Q  IITN     QFL + LV  YS LGCL  ARKVFD
Sbjct: 40  FNKFLLLLQEFPNTLFCIKSIHAQ--IITNSESRHQFLASNLVKGYSGLGCLAIARKVFD 99

Query: 285 EIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEM 344
           +I QPK +LCN+M+NGYL+N+ Y + +EL + M   HLEFDSY+CN+ LKACM L D+E 
Sbjct: 100 QISQPKPILCNSMLNGYLRNQCYKETVELFEFMGFLHLEFDSYSCNYVLKACMELEDFEK 159

Query: 345 GMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQ 404
           G EV+  AV + + G RFLGSS+++F +K GD   A++ F++MV++DVVCWN MI G+++
Sbjct: 160 GKEVVQRAVDRRVDGDRFLGSSMISFFMKFGDFDGARWVFNRMVDRDVVCWNSMISGYVK 219

Query: 405 EGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRV 464
              + E   LF++M+   + PS +TM+SL+Q+CG +R+L  GKC+HGFVLG GM  D  V
Sbjct: 220 GCYYFEALGLFIEMILRGVRPSPITMVSLVQACGGLRSLELGKCVHGFVLGLGMGSDILV 279

Query: 465 LTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDV 524
           LT L+DMY K G++ESA  +F+++P++NLVSWNVMISGYVQN L+ ++  LF++L++   
Sbjct: 280 LTALVDMYSKMGEIESAHLLFDSIPAKNLVSWNVMISGYVQNCLVSKSFDLFRELVITGG 339

Query: 525 GFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASS 584
            FDSGT++SL+Q C++ ADL+ GK+LHG I+RRGLD+NL+L TAIVDLY+KCG++  A+ 
Sbjct: 340 DFDSGTIISLLQCCAQIADLESGKVLHGCIFRRGLDMNLILSTAIVDLYSKCGAVKEATF 399

Query: 585 VFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGL 644
           VF+RMK++NVI+WTAMLVGLAQNG A DALKLF+QMQ E V  N++TLV LV+ C  LG 
Sbjct: 400 VFDRMKDRNVITWTAMLVGLAQNGKAEDALKLFNQMQEEGVAANSITLVGLVHSCAHLGS 459

Query: 645 LREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMIS 704
           L++GRSVHA L R  +  +VV  TALIDMYAKC KIN AE V + G   KDVIL+NSMI+
Sbjct: 460 LKKGRSVHAQLFRHGYDFDVVNRTALIDMYAKCGKINYAERVLRDGSFFKDVILWNSMIT 519

Query: 705 GYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTT 764
           GYGMHG GHKAL ++ RM  EG++P+++TF+SLLSACSHSGLV +G +LF +M  DHN  
Sbjct: 520 GYGMHGQGHKALDIFCRMLEEGVKPSQTTFISLLSACSHSGLVNQGRSLFVSMESDHNIR 579

Query: 765 PTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADR 824
           PT+K YAC VDLLSRAGRL++AE LI QMPF  +  + E LL+GC  HK+I++G+K AD 
Sbjct: 580 PTEKHYACYVDLLSRAGRLQEAEALIKQMPFQSSGAVFEALLSGCRTHKNIDIGIKAADH 639

Query: 825 LLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 875
           LLSL++ NP IY+ LSNIYA+A RWD+V ++RGLM ++ +KK PGYS IE
Sbjct: 640 LLSLDATNPGIYVMLSNIYAEARRWDAVDHIRGLMKKRGLKKTPGYSLIE 687

[Close]
BLAST of CSPI01G27230 vs. TrEMBL
Match: A0A0D2PJ08_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G344400 PE=4 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 1.2e-213
Identity = 379/664 (57.08%), Postives = 491/664 (73.95%), Query Frame = 1 

Query: 214 LPLIVSFWLWL---FSTTLLLLPSFDAAFSSLSLFSSQKIIITNPIYGDQFLVAKLVAAY 273
           LPL +  +L L   FS TLL + S  A             IITN +   QFL + LV +Y
Sbjct: 36  LPLDIQRFLSLLHEFSNTLLSVKSIHAQ------------IITNSVSKHQFLSSNLVRSY 95

Query: 274 SSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCN 333
           S LGCL  ARKVFD+IPQPK +LCN+M+NGYL+N+ Y + IEL ++M      FDSY+CN
Sbjct: 96  SELGCLGLARKVFDKIPQPKPILCNSMLNGYLRNQCYKETIELFELMGASDWGFDSYSCN 155

Query: 334 FALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEK 393
           F LKACM L DYE G E+I  AV   + G +FLGSS++NF +K GD   A+  F+QM+ +
Sbjct: 156 FVLKACMELEDYERGTEIIKRAVDHRVDGDKFLGSSMINFFMKFGDFNSARRVFNQMISR 215

Query: 394 DVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMH 453
           DVVCWN MIGG+++   +   ++LFL+M+   + PSA+TM+SL+Q+CG MR+L  GK +H
Sbjct: 216 DVVCWNSMIGGYVKGCYYVAAFDLFLEMILCGVRPSAITMVSLVQACGGMRDLELGKRVH 275

Query: 454 GFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLV 513
           G VL FG+  D  V T LIDMY K G+ E AR +F+ MP++ LVSWNV+ISGYVQN L+ 
Sbjct: 276 GLVLVFGLGTDVLVHTALIDMYSKLGEHERARSVFDIMPAKTLVSWNVIISGYVQNCLVY 335

Query: 514 ETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIV 573
           E   LFQKL++   GFDSGT++SL+Q C++ ADL+ GK+LHG+I+R+GLD+N++L TA+V
Sbjct: 336 EAFYLFQKLVLTGGGFDSGTIISLLQSCAQVADLESGKVLHGYIFRKGLDINVILCTALV 395

Query: 574 DLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNAL 633
           DLY+KCG+L  A+ +F+RMKN+NVI+WTAMLVGLAQNGHA DA++LF +MQ E VT N+ 
Sbjct: 396 DLYSKCGALKEATFMFDRMKNRNVITWTAMLVGLAQNGHAEDAIRLFGKMQEEGVTANST 455

Query: 634 TLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYG 693
           TLVSLV+CC  LG L++GRSVHA L R+ +A +VV  TALIDMYAKC  IN AE VF+  
Sbjct: 456 TLVSLVHCCAHLGSLKKGRSVHARLLRYGYAFDVVNRTALIDMYAKCGNINYAERVFEDV 515

Query: 694 LTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEG 753
              KDVI +NSMI+GYGMHG GHKAL +Y RM  EGL+PN++TFVSLLSACSHSGLV++G
Sbjct: 516 SFFKDVISWNSMITGYGMHGQGHKALDLYRRMLEEGLKPNKTTFVSLLSACSHSGLVDQG 575

Query: 754 IALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCL 813
            +LF +M  DHN    +K YAC VDLLSRAG +++AE LI QMPF  +  + E LLNGC 
Sbjct: 576 RSLFLSMESDHNIRANEKHYACYVDLLSRAGHIKEAEVLIKQMPFQSSREVFEALLNGCR 635

Query: 814 LHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGY 873
           +HK+I++G+K AD LLSL++ NP IYI LSNIYA+A RWD+V ++RGLM  + +KK PGY
Sbjct: 636 MHKNIDIGIKAADYLLSLDATNPGIYIMLSNIYAEARRWDAVDHIRGLMRGRGLKKTPGY 687

Query: 874 SSIE 875
           S IE
Sbjct: 696 SLIE 687

[Close]
BLAST of CSPI01G27230 vs. TrEMBL
Match: I1ND66_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G013300 PE=4 SV=2)

HSP 1 Score: 700.3 bits (1806), Expect = 3.1e-198
Identity = 357/660 (54.09%), Postives = 469/660 (71.06%), Query Frame = 1 

Query: 215 PLIVSFWLWLFSTTLLLLPSFDAAFSSLSLFSSQKIIITNPIYGDQFLVAKLVAAYSSLG 274
           P + S  L  FS TL+ + S  A             II N +  + FL AKL+  YS LG
Sbjct: 46  PSVFSSLLHQFSNTLIHVKSIHAQ------------IIKNWVSTESFLAAKLIRVYSDLG 105

Query: 275 CLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALK 334
            L +AR VFD+   P+T +CNAM+ G+L+N+++ +   L +MM  C +E +SYTC FALK
Sbjct: 106 FLGHARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALK 165

Query: 335 ACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVC 394
           AC  LLD E+GME+I  AV +G     ++GSS++NFLVK G +  AQ  F  M EKDVVC
Sbjct: 166 ACTDLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVC 225

Query: 395 WNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVL 454
           WN +IGG++Q+GLF E   +FL+M+   + PS VTM +L+++CG+      G C H +VL
Sbjct: 226 WNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVL 285

Query: 455 GFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLR 514
             GM  D  VLT+L+DMY   GD  SA  +F++M SR+L+SWN MISGYVQNG++ E+  
Sbjct: 286 ALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYA 345

Query: 515 LFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYA 574
           LF++L+    GFDSGT+VSLI+ CS+T+DL+ G+ILH  I R+ L+ +LVL TAIVD+Y+
Sbjct: 346 LFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYS 405

Query: 575 KCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVS 634
           KCG++  A+ VF RM  KNVI+WTAMLVGL+QNG+A DALKLF QMQ E+V  N++TLVS
Sbjct: 406 KCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVS 465

Query: 635 LVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPK 694
           LV+CC  LG L +GR+VHA   R  +A + V+ +ALIDMYAKC KI+SAE +F      K
Sbjct: 466 LVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLK 525

Query: 695 DVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALF 754
           DVIL NSMI GYGMHG G  AL VY RM  E L+PN++TFVSLL+ACSHSGLVEEG ALF
Sbjct: 526 DVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALF 585

Query: 755 QNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKD 814
            +M +DH+  P  K YAC+VDL SRAGRL +A+EL+ QMPF P++ +LE LL+GC  HK+
Sbjct: 586 HSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKN 645

Query: 815 IELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 874
             +G+++ADRL+SL+  N  IY+ LSNIYA+A +W+SV Y+RGLM  Q +KKIPGYS IE
Sbjct: 646 TNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIE 693

[Close]
BLAST of CSPI01G27230 vs. TrEMBL
Match: V7CHX8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G092700g PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 1.5e-197
Identity = 357/662 (53.93%), Postives = 472/662 (71.30%), Query Frame = 1 

Query: 215 PLIVSFWLWLFSTTLLLLPSFDAAFSS--LSLFSSQKIIITNPIYGDQFLVAKLVAAYSS 274
           P +VS     F+  L +  S    FS+  + + S    II N +  + +L AKL+  YS 
Sbjct: 31  PTLVSLHHAPFNQPLSIFYSLLHQFSNTLIHVKSIHAQIIKNWVSTENYLAAKLIRIYSD 90

Query: 275 LGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFA 334
           LG L  ARKVFD+     T +CNAM+ G+L+N+++ +  +L KMM    +E +SYTC FA
Sbjct: 91  LGFLFPARKVFDQCSLRGTAVCNAMMAGFLRNQQHMEVPKLFKMMGSGDIEINSYTCMFA 150

Query: 335 LKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDV 394
           LKAC  LLD E+GME++     +G     F+GSSI+NF VK G    A+  F  M EKD+
Sbjct: 151 LKACTSLLDDEIGMEIVMTVFQRGFHLHPFVGSSIVNFFVKCGYFDDARKVFDGMPEKDI 210

Query: 395 VCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGF 454
           VCWN MIGG++QEGLF E   +FL M+   ++PS VTM+SL+++CGE      G   HG 
Sbjct: 211 VCWNSMIGGYVQEGLFNEAIKMFLAMIGGGLKPSPVTMVSLLKACGECGLKKLGTSAHGC 270

Query: 455 VLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVET 514
           V+  GM  D  VLT+L+DMY   GD ++A  +F  M +R+L+SWN MISGYVQNGL+ E+
Sbjct: 271 VIALGMGNDVFVLTSLVDMYSNLGDTDNAALVFNGMFNRSLISWNAMISGYVQNGLIPES 330

Query: 515 LRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDL 574
             LF++L+    GFDSGT+VSL++ CS+T+DL  G+ILH  I R+G++ N+VL T+IVD+
Sbjct: 331 FALFRRLVQSGSGFDSGTLVSLMRGCSQTSDLKNGRILHSCIIRKGIESNIVLSTSIVDM 390

Query: 575 YAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTL 634
           Y+KCG++  A++VF RM+ KNVI+WTAMLVGL+QNG+A DALKLF QMQ E+V  N++TL
Sbjct: 391 YSKCGAIKLATTVFGRMEKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVLANSVTL 450

Query: 635 VSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLT 694
           VSLV+CC  LG L +GRSVHA L R  +A + V M+AL+DMYAKC KI SAE +F  G  
Sbjct: 451 VSLVHCCAHLGSLNKGRSVHAHLIRHGYAFDAVNMSALLDMYAKCGKIRSAEKLFNKGFH 510

Query: 695 PKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIA 754
            KDVIL N+MI GYGMHGLGH AL VY RM  E L+PN++TFVSLL+ACSHSGLVEEG A
Sbjct: 511 LKDVILCNTMIMGYGMHGLGHYALGVYGRMIEERLKPNQTTFVSLLTACSHSGLVEEGKA 570

Query: 755 LFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLH 814
           LF  + +DHN  P +K YAC+VDLLSRAGRL++A+ L+ QMPF P++ +LE LL+GC  H
Sbjct: 571 LFDCIERDHNIKPQEKHYACLVDLLSRAGRLKEADALVKQMPFQPSTDVLEALLSGCRTH 630

Query: 815 KDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSS 874
           K+I +G+++ADRL+SL+  N  IY+ LSNIYA+A RW+SV Y+RGLM  Q +KK+PGYS 
Sbjct: 631 KNINMGIQIADRLISLDYLNSGIYVMLSNIYAEARRWESVNYIRGLMRMQGLKKVPGYSL 690

[Close]
BLAST of CSPI01G27230 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 418.7 bits (1075), Expect = 9.1e-117
Identity = 219/629 (34.82%), Postives = 369/629 (58.66%), Query Frame = 1 

Query: 252 ITNPIYGDQFLV-----AKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNER 311
           + N I G+ F++     +KL   Y++ G L+ A +VFDE+   K +  N ++N   ++  
Sbjct: 116 VDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGD 175

Query: 312 YNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSS 371
           ++  I L K M    +E DSYT +   K+   L     G ++ G  +  G      +G+S
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235

Query: 372 ILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPS 431
           ++ F +K   +  A+  F +M E+DV+ WN +I G++  GL  +G ++F+ ML + IE  
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295

Query: 432 AVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFE 491
             T++S+   C + R ++ G+ +H   +    SR+ R   TL+DMY K GD++SA+ +F 
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355

Query: 492 NMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDG 551
            M  R++VS+  MI+GY + GL  E ++LF+++  + +  D  TV +++  C+R   LD 
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDE 415

Query: 552 GKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQ 611
           GK +H +I    L  ++ +  A++D+YAKCGS+  A  VF  M+ K++ISW  ++ G ++
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSK 475

Query: 612 NGHARDALKLFD-QMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVV 671
           N +A +AL LF+  ++ +R + +  T+  ++  C  L    +GR +H  + R  + S+  
Sbjct: 476 NCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRH 535

Query: 672 VMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNRE 731
           V  +L+DMYAKC  +  A M+F   +  KD++ +  MI+GYGMHG G +A+ ++++M + 
Sbjct: 536 VANSLVDMYAKCGALLLAHMLFD-DIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 595

Query: 732 GLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQ 791
           G++ +E +FVSLL ACSHSGLV+EG   F  M  +    PT + YACIVD+L+R G L +
Sbjct: 596 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 655

Query: 792 AEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAK 851
           A   I  MP  P + I   LL GC +H D++L  K+A+++  LE  N   Y+ ++NIYA+
Sbjct: 656 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 715

Query: 852 ASRWDSVKYVRGLMMEQEIKKIPGYSSIE 875
           A +W+ VK +R  + ++ ++K PG S IE
Sbjct: 716 AEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743

[Close]
BLAST of CSPI01G27230 vs. TAIR10
Match: AT4G21300.1 (AT4G21300.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 409.8 bits (1052), Expect = 4.2e-114
Identity = 209/617 (33.87%), Postives = 353/617 (57.21%), Query Frame = 1 

Query: 259 DQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMS 318
           ++F+ + L+ AY   G ++   K+FD + Q   V+ N M+NGY +    +  I+   +M 
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231

Query: 319 RCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIM 378
              +  ++ T +  L  C   L  ++G+++ GL V  G+     + +S+L+   K G   
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291

Query: 379 CAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCG 438
            A   F  M   D V WN MI G++Q GL  E    F +M+ + + P A+T  SL+ S  
Sbjct: 292 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 351

Query: 439 EMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNV 498
           +  NL + K +H +++   +S D  + + LID Y K   V  A+ IF    S ++V +  
Sbjct: 352 KFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411

Query: 499 MISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRG 558
           MISGY+ NGL +++L +F+ L+   +  +  T+VS++ +      L  G+ LHGFI ++G
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471

Query: 559 LDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFD 618
            D    +  A++D+YAKCG +  A  +FER+  ++++SW +M+   AQ+ +   A+ +F 
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531

Query: 619 QMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCS 678
           QM    + ++ +++ + +  C  L     G+++H  + +   AS+V   + LIDMYAKC 
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591

Query: 679 KINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRM-NREGLQPNESTFVSL 738
            + +A  VFK  +  K+++ +NS+I+  G HG    +LC++H M  + G++P++ TF+ +
Sbjct: 592 NLKAAMNVFK-TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 651

Query: 739 LSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTP 798
           +S+C H G V+EG+  F++M +D+   P  + YAC+VDL  RAGRL +A E +  MPF P
Sbjct: 652 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 711

Query: 799 TSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVKYVRG 858
            +G+  TLL  C LHK++EL    + +L+ L+  N   Y+ +SN +A A  W+SV  VR 
Sbjct: 712 DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRS 771

Query: 859 LMMEQEIKKIPGYSSIE 875
           LM E+E++KIPGYS IE
Sbjct: 772 LMKEREVQKIPGYSWIE 787

[Close]
BLAST of CSPI01G27230 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 403.3 bits (1035), Expect = 4.0e-112
Identity = 207/625 (33.12%), Postives = 342/625 (54.72%), Query Frame = 1 

Query: 250 IIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYND 309
           ++  N +Y + F   KLV+ +   G ++ A +VF+ I     VL + M+ G+ +    + 
Sbjct: 59  LVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDK 118

Query: 310 CIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILN 369
            ++    M    +E   Y   + LK C    +  +G E+ GL V  G +   F  + + N
Sbjct: 119 ALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLEN 178

Query: 370 FLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVT 429
              K   +  A+  F +M E+D+V WN ++ G+ Q G+ R    +   M    ++PS +T
Sbjct: 179 MYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFIT 238

Query: 430 MISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMP 489
           ++S++ +   +R ++ GK +HG+ +  G      + T L+DMY K G +E+AR +F+ M 
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298

Query: 490 SRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKI 549
            RN+VSWN MI  YVQN    E + +FQK++ + V     +V+  +  C+   DL+ G+ 
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 550 LHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGH 609
           +H      GLD N+ +  +++ +Y KC  +  A+S+F +++++ ++SW AM++G AQNG 
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 610 ARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTA 669
             DAL  F QM++  V  +  T VS++     L +    + +H  + R      V V TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478

Query: 670 LIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQP 729
           L+DMYAKC  I  A ++F   ++ + V  +N+MI GYG HG G  AL ++  M +  ++P
Sbjct: 479 LVDMYAKCGAIMIARLIFDM-MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 538

Query: 730 NESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEEL 789
           N  TF+S++SACSHSGLVE G+  F  M ++++   +   Y  +VDLL RAGRL +A + 
Sbjct: 539 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 598

Query: 790 INQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRW 849
           I QMP  P   +   +L  C +HK++    K A+RL  L   +   ++ L+NIY  AS W
Sbjct: 599 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 658

Query: 850 DSVKYVRGLMMEQEIKKIPGYSSIE 875
           + V  VR  M+ Q ++K PG S +E
Sbjct: 659 EKVGQVRVSMLRQGLRKTPGCSMVE 682

[Close]
BLAST of CSPI01G27230 vs. TAIR10
Match: AT2G03380.1 (AT2G03380.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 401.7 bits (1031), Expect = 1.2e-111
Identity = 227/635 (35.75%), Postives = 356/635 (56.06%), Query Frame = 1 

Query: 243 SLFSSQKIIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYL 302
           SL  S  ++  N + GD  +  KLV+ Y   G  ++AR VFD+IP+P   L   M+  Y 
Sbjct: 59  SLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYC 118

Query: 303 QNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRF 362
            N+   + ++L  ++ +    +D    + ALKAC  L D + G + I   + K  +    
Sbjct: 119 LNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK-IHCQLVKVPSFDNV 178

Query: 363 LGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNK 422
           + + +L+   K G+I  A   F+ +  ++VVCW  MI G+++  L  EG  LF  M  N 
Sbjct: 179 VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENN 238

Query: 423 IEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESAR 482
           +  +  T  +LI +C ++  L  GK  HG ++  G+   + ++T+L+DMY K GD+ +AR
Sbjct: 239 VLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNAR 298

Query: 483 WIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTA 542
            +F      +LV W  MI GY  NG + E L LFQK+   ++  +  T+ S++  C    
Sbjct: 299 RVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIE 358

Query: 543 DLDGGKILHGFIYRRGL-DLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAML 602
           +L+ G+ +HG   + G+ D N+    A+V +YAKC     A  VFE    K++++W +++
Sbjct: 359 NLELGRSVHGLSIKVGIWDTNVA--NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSII 418

Query: 603 VGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHF- 662
            G +QNG   +AL LF +M +E VT N +T+ SL   C  LG L  G S+HA   +  F 
Sbjct: 419 SGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFL 478

Query: 663 -ASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVY 722
            +S V V TAL+D YAKC    SA ++F   +  K+ I +++MI GYG  G    +L ++
Sbjct: 479 ASSSVHVGTALLDFYAKCGDPQSARLIFDT-IEEKNTITWSAMIGGYGKQGDTIGSLELF 538

Query: 723 HRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSR 782
             M ++  +PNESTF S+LSAC H+G+V EG   F +M KD+N TP+ K Y C+VD+L+R
Sbjct: 539 EEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLAR 598

Query: 783 AGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITL 842
           AG L QA ++I +MP  P        L+GC +H   +LG  +  ++L L   + S Y+ +
Sbjct: 599 AGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLV 658

Query: 843 SNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 875
           SN+YA   RW+  K VR LM ++ + KI G+S++E
Sbjct: 659 SNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689

[Close]
BLAST of CSPI01G27230 vs. TAIR10
Match: AT5G39350.1 (AT5G39350.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 397.1 bits (1019), Expect = 2.8e-110
Identity = 217/645 (33.64%), Postives = 358/645 (55.50%), Query Frame = 1 

Query: 239 FSSLSLFSSQKIIITNPIYGDQF---LVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCN 298
           F++    S  K +  + I G +    +++ L   Y+  G +  ARK+F+E+PQ   +  N
Sbjct: 25  FAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYN 84

Query: 299 AMVNGYLQNERYNDCIEL-LKMMSR-CHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAV 358
            ++  Y++   Y+D I + ++M+S       D YT  F  KA   L   ++G+ V G  +
Sbjct: 85  IVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRIL 144

Query: 359 CKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYN 418
                  +++ +++L   +  G +  A+  F  M  +DV+ WN MI G+ + G   +   
Sbjct: 145 RSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALM 204

Query: 419 LFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYC 478
           +F  M+   ++    T++S++  CG +++L  G+ +H  V    +     V   L++MY 
Sbjct: 205 MFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYL 264

Query: 479 KSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVS 538
           K G ++ AR++F+ M  R++++W  MI+GY ++G +   L L + +  + V  ++ T+ S
Sbjct: 265 KCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIAS 324

Query: 539 LIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKN 598
           L+ +C     ++ GK LHG+  R+ +  ++++ T+++ +YAKC  +     VF      +
Sbjct: 325 LVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYH 384

Query: 599 VISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHA 658
              W+A++ G  QN    DAL LF +M+ E V  N  TL SL+     L  LR+  ++H 
Sbjct: 385 TGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHC 444

Query: 659 TLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGL----TPKDVILYNSMISGYGMH 718
            LT+  F S +   T L+ +Y+KC  + SA  +F  G+      KDV+L+ ++ISGYGMH
Sbjct: 445 YLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFN-GIQEKHKSKDVVLWGALISGYGMH 504

Query: 719 GLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKL 778
           G GH AL V+  M R G+ PNE TF S L+ACSHSGLVEEG+ LF+ M++ + T      
Sbjct: 505 GDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNH 564

Query: 779 YACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLE 838
           Y CIVDLL RAGRL +A  LI  +PF PTS +   LL  C+ H++++LG   A++L  LE
Sbjct: 565 YTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELE 624

Query: 839 SRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 875
             N   Y+ L+NIYA   RW  ++ VR +M    ++K PG+S+IE
Sbjct: 625 PENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668

[Close]
BLAST of CSPI01G27230 vs. NCBI nr
Match: gi|778662656|ref|XP_011659934.1| (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 1258.4 bits (3255), Expect = 0.0e+00
Identity = 631/651 (96.93%), Postives = 633/651 (97.24%), Query Frame = 1 

Query: 224 LFSTTLLLLPSFDAAFSSLSLFSSQKIIITNPIYGDQFLVAKLVAAYSSLGCLENARKVF 283
           L    L  L  F     S+    +Q IIITNPIYGDQFLVAKLVAAYSSLGCLENARKVF
Sbjct: 35  LLQPFLSFLQEFSHNLLSVKSIHAQ-IIITNPIYGDQFLVAKLVAAYSSLGCLENARKVF 94

Query: 284 DEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYE 343
           DEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYE
Sbjct: 95  DEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYE 154

Query: 344 MGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFM 403
           MGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFM
Sbjct: 155 MGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFM 214

Query: 404 QEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTR 463
           QEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTR
Sbjct: 215 QEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTR 274

Query: 464 VLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDD 523
           VLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDD
Sbjct: 275 VLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDD 334

Query: 524 VGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYAS 583
           VGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYAS
Sbjct: 335 VGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYAS 394

Query: 584 SVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLG 643
           SVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLG
Sbjct: 395 SVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLG 454

Query: 644 LLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMI 703
           LLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMI
Sbjct: 455 LLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMI 514

Query: 704 SGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNT 763
           SGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNT
Sbjct: 515 SGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNT 574

Query: 764 TPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLAD 823
           TPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLAD
Sbjct: 575 TPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLAD 634

Query: 824 RLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 875
           RLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE
Sbjct: 635 RLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 684

[Close]
BLAST of CSPI01G27230 vs. NCBI nr
Match: gi|700211048|gb|KGN66144.1| (hypothetical protein Csa_1G573630 [Cucumis sativus])

HSP 1 Score: 1226.1 bits (3171), Expect = 0.0e+00
Identity = 607/607 (100.00%), Postives = 607/607 (100.00%), Query Frame = 1 

Query: 297 MVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKG 356
           MVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKG
Sbjct: 1   MVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKG 60

Query: 357 LAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFL 416
           LAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFL
Sbjct: 61  LAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFL 120

Query: 417 DMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSG 476
           DMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSG
Sbjct: 121 DMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSG 180

Query: 477 DVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQ 536
           DVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQ
Sbjct: 181 DVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQ 240

Query: 537 LCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVIS 596
           LCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVIS
Sbjct: 241 LCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVIS 300

Query: 597 WTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLT 656
           WTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLT
Sbjct: 301 WTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLT 360

Query: 657 RFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKAL 716
           RFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKAL
Sbjct: 361 RFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKAL 420

Query: 717 CVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDL 776
           CVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDL
Sbjct: 421 CVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDL 480

Query: 777 LSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIY 836
           LSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIY
Sbjct: 481 LSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIY 540

Query: 837 ITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEGEFAAMLGVIKQMLGSSRWPSV 896
           ITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEGEFAAMLGVIKQMLGSSRWPSV
Sbjct: 541 ITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEGEFAAMLGVIKQMLGSSRWPSV 600

Query: 897 VSYFVHY 904
           VSYFVHY
Sbjct: 601 VSYFVHY 607

[Close]
BLAST of CSPI01G27230 vs. NCBI nr
Match: gi|659099713|ref|XP_008450740.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-like [Cucumis melo])

HSP 1 Score: 1205.7 bits (3118), Expect = 0.0e+00
Identity = 600/626 (95.85%), Postives = 608/626 (97.12%), Query Frame = 1 

Query: 249 KIIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYN 308
           +IIITN IYGDQFLVAKLVAAYS LGCLE ARKVFDEIPQPKTVLCNAMVNGYLQNE +N
Sbjct: 58  QIIITNGIYGDQFLVAKLVAAYSGLGCLETARKVFDEIPQPKTVLCNAMVNGYLQNEHFN 117

Query: 309 DCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSIL 368
           DCIELL+MMSRCHLEFDSYTCNFALKAC FLLDYEMGMEVI LAVCKGLA GRFLGSSIL
Sbjct: 118 DCIELLEMMSRCHLEFDSYTCNFALKACTFLLDYEMGMEVIRLAVCKGLARGRFLGSSIL 177

Query: 369 NFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAV 428
           NFLVKTGDIMCAQ+FFHQM EKDVVCWNVMIGGFMQEGLFREGYNLF DMLYNKIEPSAV
Sbjct: 178 NFLVKTGDIMCAQYFFHQMDEKDVVCWNVMIGGFMQEGLFREGYNLFFDMLYNKIEPSAV 237

Query: 429 TMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENM 488
           TMISLIQSCGE RNL FGKCMH FVLGFGMS DTRVLTTLIDMYCKSGDVESARWIF+NM
Sbjct: 238 TMISLIQSCGETRNLKFGKCMHSFVLGFGMSSDTRVLTTLIDMYCKSGDVESARWIFDNM 297

Query: 489 PSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGK 548
           PSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGK
Sbjct: 298 PSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGK 357

Query: 549 ILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNG 608
           ILHG IYRRGLDLNLVL TAIVDLYAKCGSLAYASSVFER+KNKNVISWTAMLVGLAQNG
Sbjct: 358 ILHGCIYRRGLDLNLVLSTAIVDLYAKCGSLAYASSVFERIKNKNVISWTAMLVGLAQNG 417

Query: 609 HARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMT 668
           HARDALKLFDQMQNERVTFN LTLVSLVYCCTLL LLREGRSVHATLTRFHFASEVVVMT
Sbjct: 418 HARDALKLFDQMQNERVTFNVLTLVSLVYCCTLLRLLREGRSVHATLTRFHFASEVVVMT 477

Query: 669 ALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQ 728
           ALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQ
Sbjct: 478 ALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQ 537

Query: 729 PNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEE 788
           PNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRL+QAEE
Sbjct: 538 PNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLQQAEE 597

Query: 789 LINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASR 848
           LINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASR
Sbjct: 598 LINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASR 657

Query: 849 WDSVKYVRGLMMEQEIKKIPGYSSIE 875
           WDSVK+VRGLMMEQEIKKIPG SSIE
Sbjct: 658 WDSVKHVRGLMMEQEIKKIPGCSSIE 683

[Close]
BLAST of CSPI01G27230 vs. NCBI nr
Match: gi|590643012|ref|XP_007030684.1| (Pentatricopeptide repeat superfamily protein [Theobroma cacao])

HSP 1 Score: 756.5 bits (1952), Expect = 5.2e-215
Identity = 370/650 (56.92%), Postives = 490/650 (75.38%), Query Frame = 1 

Query: 225 FSTTLLLLPSFDAAFSSLSLFSSQKIIITNPIYGDQFLVAKLVAAYSSLGCLENARKVFD 284
           F+  LLLL  F      +    +Q  IITN     QFL + LV  YS LGCL  ARKVFD
Sbjct: 40  FNKFLLLLQEFPNTLFCIKSIHAQ--IITNSESRHQFLASNLVKGYSGLGCLAIARKVFD 99

Query: 285 EIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEM 344
           +I QPK +LCN+M+NGYL+N+ Y + +EL + M   HLEFDSY+CN+ LKACM L D+E 
Sbjct: 100 QISQPKPILCNSMLNGYLRNQCYKETVELFEFMGFLHLEFDSYSCNYVLKACMELEDFEK 159

Query: 345 GMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQ 404
           G EV+  AV + + G RFLGSS+++F +K GD   A++ F++MV++DVVCWN MI G+++
Sbjct: 160 GKEVVQRAVDRRVDGDRFLGSSMISFFMKFGDFDGARWVFNRMVDRDVVCWNSMISGYVK 219

Query: 405 EGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRV 464
              + E   LF++M+   + PS +TM+SL+Q+CG +R+L  GKC+HGFVLG GM  D  V
Sbjct: 220 GCYYFEALGLFIEMILRGVRPSPITMVSLVQACGGLRSLELGKCVHGFVLGLGMGSDILV 279

Query: 465 LTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDV 524
           LT L+DMY K G++ESA  +F+++P++NLVSWNVMISGYVQN L+ ++  LF++L++   
Sbjct: 280 LTALVDMYSKMGEIESAHLLFDSIPAKNLVSWNVMISGYVQNCLVSKSFDLFRELVITGG 339

Query: 525 GFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASS 584
            FDSGT++SL+Q C++ ADL+ GK+LHG I+RRGLD+NL+L TAIVDLY+KCG++  A+ 
Sbjct: 340 DFDSGTIISLLQCCAQIADLESGKVLHGCIFRRGLDMNLILSTAIVDLYSKCGAVKEATF 399

Query: 585 VFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGL 644
           VF+RMK++NVI+WTAMLVGLAQNG A DALKLF+QMQ E V  N++TLV LV+ C  LG 
Sbjct: 400 VFDRMKDRNVITWTAMLVGLAQNGKAEDALKLFNQMQEEGVAANSITLVGLVHSCAHLGS 459

Query: 645 LREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMIS 704
           L++GRSVHA L R  +  +VV  TALIDMYAKC KIN AE V + G   KDVIL+NSMI+
Sbjct: 460 LKKGRSVHAQLFRHGYDFDVVNRTALIDMYAKCGKINYAERVLRDGSFFKDVILWNSMIT 519

Query: 705 GYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTT 764
           GYGMHG GHKAL ++ RM  EG++P+++TF+SLLSACSHSGLV +G +LF +M  DHN  
Sbjct: 520 GYGMHGQGHKALDIFCRMLEEGVKPSQTTFISLLSACSHSGLVNQGRSLFVSMESDHNIR 579

Query: 765 PTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADR 824
           PT+K YAC VDLLSRAGRL++AE LI QMPF  +  + E LL+GC  HK+I++G+K AD 
Sbjct: 580 PTEKHYACYVDLLSRAGRLQEAEALIKQMPFQSSGAVFEALLSGCRTHKNIDIGIKAADH 639

Query: 825 LLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 875
           LLSL++ NP IY+ LSNIYA+A RWD+V ++RGLM ++ +KK PGYS IE
Sbjct: 640 LLSLDATNPGIYVMLSNIYAEARRWDAVDHIRGLMKKRGLKKTPGYSLIE 687

[Close]
BLAST of CSPI01G27230 vs. NCBI nr
Match: gi|1009175468|ref|XP_015868900.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Ziziphus jujuba])

HSP 1 Score: 751.9 bits (1940), Expect = 1.3e-213
Identity = 368/624 (58.97%), Postives = 467/624 (74.84%), Query Frame = 1 

Query: 251 IITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDC 310
           IITN +  DQ L  KL+  YS L  L++AR VFD+  QP+T LCNAM++GYL+NER+ + 
Sbjct: 68  IITNCVAIDQSLGTKLIRTYSDLSSLDDARSVFDQFSQPRTFLCNAMLSGYLRNERHRET 127

Query: 311 IELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNF 370
           ++L +MM  C+LEFDSYT N+ALKACM L DYEMGMEVI   VCK +   ++L S ++NF
Sbjct: 128 LDLFRMMGSCNLEFDSYTFNYALKACMGLSDYEMGMEVIKSIVCKKMDKEKYLASLMINF 187

Query: 371 LVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTM 430
           LVK   I  A+  F  + E+DVVCWN MIGG++Q G F E +++F  M  + I PS +TM
Sbjct: 188 LVKLRKIGDARRVFDMISERDVVCWNSMIGGYVQSGQFDEVFDMFFRMRDSGITPSPITM 247

Query: 431 ISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPS 490
           +SLIQ+CG   ++  GKC+HG VL FGM  DT VL+ L+DMY   GD+  A  +FE MP 
Sbjct: 248 VSLIQACGRSGDMEIGKCVHGCVLEFGMGEDTFVLSALVDMYSNMGDIGYAHLVFETMPM 307

Query: 491 RNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKIL 550
           RNLVSWN MISG +QNGL+ E+  LF++L+    GFDSGT+VSLIQ C+ TAD++ GKIL
Sbjct: 308 RNLVSWNTMISGCIQNGLVHESFSLFRRLVTSGCGFDSGTIVSLIQGCALTADMESGKIL 367

Query: 551 HGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHA 610
           HG + RRG +LNL++ TAI+DLY+KCG++  A+ VF+RMK +NVI+WTAMLVGLAQNG A
Sbjct: 368 HGCVIRRGFELNLIISTAIIDLYSKCGAIEQATFVFDRMKERNVITWTAMLVGLAQNGSA 427

Query: 611 RDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTAL 670
            DA+KLF +MQ E V  N++TLVSLV+ C  +G  +EGRS HA L R  +  ++VV TAL
Sbjct: 428 GDAMKLFHRMQAEGVVANSVTLVSLVHSCAYVGSPKEGRSTHAYLIRRGYTFDIVVTTAL 487

Query: 671 IDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPN 730
           IDMYAKC KINSAEM+F      KDVILYNSMI+GYG+HG GH+A+ +Y RM  EG++PN
Sbjct: 488 IDMYAKCGKINSAEMIFSNSSIHKDVILYNSMITGYGIHGHGHQAVDIYRRMKEEGVKPN 547

Query: 731 ESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELI 790
           E++F+SLL+ACSHSGLVEEGI LF +M +DHN  PT K YA IVDLLSRAGR ++AE  I
Sbjct: 548 ETSFLSLLTACSHSGLVEEGINLFHSMERDHNIKPTQKHYASIVDLLSRAGRFKEAEAFI 607

Query: 791 NQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWD 850
            QMPF P S I E LLNGC  HK+I+LG+K AD+LL LES NP IY+ LSNIYA+A +WD
Sbjct: 608 EQMPFEPGSSIFEALLNGCQTHKNIDLGIKTADKLLGLESMNPGIYVVLSNIYAQARKWD 667

Query: 851 SVKYVRGLMMEQEIKKIPGYSSIE 875
           +V YVR +M  + +KKIPGYS IE
Sbjct: 668 AVNYVRSIMRIRGLKKIPGYSLIE 691

The following BLAST results are available for this feature:
BLAST of CSPI01G27230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP320_ARATH1.6e-11534.82Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
PP333_ARATH7.5e-11333.87Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN... [more]
PPR32_ARATH7.1e-11133.12Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP146_ARATH2.1e-11035.75Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop... [more]
PP405_ARATH5.1e-10933.64Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN... [more]
BLAST of CSPI01G27230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYM5_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573630 PE=4 SV=1[more]
A0A061F2D9_THECC3.7e-21556.92Pentatricopeptide repeat superfamily protein OS=Theobroma cacao GN=TCM_026441 PE... [more]
A0A0D2PJ08_GOSRA1.2e-21357.08Uncharacterized protein OS=Gossypium raimondii GN=B456_007G344400 PE=4 SV=1[more]
I1ND66_SOYBN3.1e-19854.09Uncharacterized protein OS=Glycine max GN=GLYMA_20G013300 PE=4 SV=2[more]
V7CHX8_PHAVU1.5e-19753.93Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G092700g PE=4 SV=1[more]
BLAST of CSPI01G27230 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G18750.19.1e-11734.82 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G21300.14.2e-11433.87 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G11290.14.0e-11233.12 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G03380.11.2e-11135.75 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G39350.12.8e-11033.64 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CSPI01G27230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778662656|ref|XP_011659934.1|0.0e+0096.93PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like ... [more]
gi|700211048|gb|KGN66144.1|0.0e+00100.00hypothetical protein Csa_1G573630 [Cucumis sativus][more]
gi|659099713|ref|XP_008450740.1|0.0e+0095.85PREDICTED: pentatricopeptide repeat-containing protein At4g18750, chloroplastic-... [more]
gi|590643012|ref|XP_007030684.1|5.2e-21556.92Pentatricopeptide repeat superfamily protein [Theobroma cacao][more]
gi|1009175468|ref|XP_015868900.1|1.3e-21358.97PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Ziziphus ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G27230.1CSPI01G27230.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 162..206
score: 1.1
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 163..205
score: 2.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 163..206
score: 13
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 665..688
score: 0.57coord: 494..522
score: 8.0E-6coord: 770..793
score: 0.97coord: 466..492
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 289..336
score: 2.3E-7coord: 694..742
score: 4.3E-12coord: 390..437
score: 1.3E-10coord: 592..638
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 595..626
score: 1.9E-5coord: 292..325
score: 2.6E-4coord: 393..426
score: 4.5E-4coord: 733..760
score: 0.0028coord: 465..494
score: 0.0013coord: 494..523
score: 1.6E-4coord: 698..731
score: 6.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 360..390
score: 5.053coord: 527..561
score: 6.018coord: 496..526
score: 6.171coord: 663..693
score: 5.229coord: 562..592
score: 7.311coord: 593..627
score: 10.468coord: 695..729
score: 11.805coord: 766..796
score: 7.048coord: 391..425
score: 10.676coord: 290..324
score: 8.166coord: 628..662
score: 5.459coord: 461..495
score: 10.874coord: 325..359
score: 5.075coord: 832..866
score: 7.114coord: 730..765
score: 9.076coord: 259..289
score: 6
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 579..580
score: 2.2E-5coord: 269..321
score: 2.2E-5coord: 459..488
score: 2.2E-5coord: 731..849
score: 2.2E-5coord: 666..695
score: 2.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 459..532
score: 1.06E-5coord: 569..625
score: 1.06E-5coord: 729..856
score: 1.06E-5coord: 382..391
score: 1.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 161..208
score: 2.3
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 563..873
score: 1.3E-276coord: 206..527
score: 1.3E
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 153..210
score: 3.76